lhallee commited on
Commit
309f353
·
verified ·
1 Parent(s): 6e62186

Archive v2-reproduction-20260922 evaluate-esmfold2_300

Browse files
.gitattributes CHANGED
@@ -59,3 +59,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
59
  *.mp4 filter=lfs diff=lfs merge=lfs -text
60
  *.webm filter=lfs diff=lfs merge=lfs -text
61
  confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_600/records.json filter=lfs diff=lfs merge=lfs -text
 
 
59
  *.mp4 filter=lfs diff=lfs merge=lfs -text
60
  *.webm filter=lfs diff=lfs merge=lfs -text
61
  confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_600/records.json filter=lfs diff=lfs merge=lfs -text
62
+ confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/records.json filter=lfs diff=lfs merge=lfs -text
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/completion.json ADDED
@@ -0,0 +1,60 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema_version": 1,
3
+ "status": "complete",
4
+ "completed_at": "2026-09-23T16:46:33.152096+00:00",
5
+ "evaluation_id": "v2-reproduction-20260922",
6
+ "model_id": "esmfold2_300",
7
+ "split": "test",
8
+ "public_files": {
9
+ "inputs/split-report.json": {
10
+ "size": 1630,
11
+ "sha256": "1b004da92bc8ae7867f9a8b20ef39246b70f7b5e660a27aa0b5dd21567d07174"
12
+ },
13
+ "inputs/training-report.json": {
14
+ "size": 29445,
15
+ "sha256": "40cc7e9c82b9ffa67e057b76d0c6beabe1a0af504d41b6b563834fa9597b5773"
16
+ },
17
+ "targets.json": {
18
+ "size": 695798,
19
+ "sha256": "f97c983e51416f73bdc5607b20f6358f1fd70ba59a3379a44119255fbbb88aee"
20
+ },
21
+ "resume.json": {
22
+ "size": 50370,
23
+ "sha256": "77f2c1ce4ced552ae3e9b731ad9df0572248c258cb13be6e247833110d88bf8a"
24
+ },
25
+ "resume-history/attempt-2aa4d052d4a8412f919c08fb0ade6748.json": {
26
+ "size": 26528,
27
+ "sha256": "82875a28ca1deb6110b12535c464905a1325a41de67e478d890714c33a9acbe9"
28
+ },
29
+ "resume-history/dispatch-repair-1790175340580093400.json": {
30
+ "size": 687,
31
+ "sha256": "f072cec07055654b0184628a919f863062b0388433d52910babd3bd11935223a"
32
+ },
33
+ "records.json": {
34
+ "size": 24350886,
35
+ "sha256": "7159e5ceb48fc8ed8a68525da5f7a15a395f5cdea252c3d7c0ba7882b4033bc8"
36
+ },
37
+ "request.json": {
38
+ "size": 30542,
39
+ "sha256": "be5fb9a4b65a0c2abfa040069ffd4344a9d220ef8e595711c4849a62401e281a"
40
+ },
41
+ "skipped.json": {
42
+ "size": 3,
43
+ "sha256": "37517e5f3dc66819f61f5a7bb8ace1921282415f10551d2defa5c3eb0985b570"
44
+ },
45
+ "summary.json": {
46
+ "size": 31313,
47
+ "sha256": "80c94e52da2683a7220c602b8de626c0d6694ae488dc546461f196040f9d6164"
48
+ }
49
+ },
50
+ "private_files": {
51
+ "checkpoints/v2.safetensors": {
52
+ "size": 31082180,
53
+ "sha256": "40fd7f3d82fcefe8ad20ab2b32a37a68a84b54a527a4bce6eb9437bad2b77e31"
54
+ },
55
+ "checkpoints/pilot.safetensors": {
56
+ "size": 31082180,
57
+ "sha256": "4dfc691e529617fc7cc0cd1ee60799ce1b496fdd0d17f0b4bb78b33a96c77733"
58
+ }
59
+ }
60
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/export.json ADDED
@@ -0,0 +1,52 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema_version": 1,
3
+ "status": "complete",
4
+ "operation": "public_evaluation_export",
5
+ "checkpoint_weights_included": false,
6
+ "files": {
7
+ "inputs/split-report.json": {
8
+ "size": 1630,
9
+ "sha256": "1b004da92bc8ae7867f9a8b20ef39246b70f7b5e660a27aa0b5dd21567d07174"
10
+ },
11
+ "inputs/training-report.json": {
12
+ "size": 29445,
13
+ "sha256": "40cc7e9c82b9ffa67e057b76d0c6beabe1a0af504d41b6b563834fa9597b5773"
14
+ },
15
+ "targets.json": {
16
+ "size": 695798,
17
+ "sha256": "f97c983e51416f73bdc5607b20f6358f1fd70ba59a3379a44119255fbbb88aee"
18
+ },
19
+ "resume.json": {
20
+ "size": 50370,
21
+ "sha256": "77f2c1ce4ced552ae3e9b731ad9df0572248c258cb13be6e247833110d88bf8a"
22
+ },
23
+ "resume-history/attempt-2aa4d052d4a8412f919c08fb0ade6748.json": {
24
+ "size": 26528,
25
+ "sha256": "82875a28ca1deb6110b12535c464905a1325a41de67e478d890714c33a9acbe9"
26
+ },
27
+ "resume-history/dispatch-repair-1790175340580093400.json": {
28
+ "size": 687,
29
+ "sha256": "f072cec07055654b0184628a919f863062b0388433d52910babd3bd11935223a"
30
+ },
31
+ "records.json": {
32
+ "size": 24350886,
33
+ "sha256": "7159e5ceb48fc8ed8a68525da5f7a15a395f5cdea252c3d7c0ba7882b4033bc8"
34
+ },
35
+ "request.json": {
36
+ "size": 30542,
37
+ "sha256": "be5fb9a4b65a0c2abfa040069ffd4344a9d220ef8e595711c4849a62401e281a"
38
+ },
39
+ "skipped.json": {
40
+ "size": 3,
41
+ "sha256": "37517e5f3dc66819f61f5a7bb8ace1921282415f10551d2defa5c3eb0985b570"
42
+ },
43
+ "summary.json": {
44
+ "size": 31313,
45
+ "sha256": "80c94e52da2683a7220c602b8de626c0d6694ae488dc546461f196040f9d6164"
46
+ },
47
+ "completion.json": {
48
+ "size": 1996,
49
+ "sha256": "161092b9d5fed29248cfbbb12fd0120c080f4c13dd14f2d7f0fec7582ca1c1d9"
50
+ }
51
+ }
52
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/inputs/split-report.json ADDED
@@ -0,0 +1,66 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "status": "verified",
3
+ "targets_sha256": "f6b98315720fe663ac282c665ebf79b3996ad038d8a6034da39c5dc7af24f727",
4
+ "sequences": 106860,
5
+ "clusters": 35543,
6
+ "components": 22958,
7
+ "largest_components": [
8
+ {
9
+ "component": 31161,
10
+ "standard_targets": 187914
11
+ },
12
+ {
13
+ "component": 7588,
14
+ "standard_targets": 3104
15
+ },
16
+ {
17
+ "component": 29315,
18
+ "standard_targets": 2872
19
+ },
20
+ {
21
+ "component": 18136,
22
+ "standard_targets": 2511
23
+ },
24
+ {
25
+ "component": 35024,
26
+ "standard_targets": 2362
27
+ }
28
+ ],
29
+ "counts": {
30
+ "test/complex": 128,
31
+ "test/dimer_hetero": 96,
32
+ "test/dimer_homo": 96,
33
+ "test/long": 64,
34
+ "test/monomer_long": 64,
35
+ "test/monomer_medium": 64,
36
+ "test/monomer_short": 64,
37
+ "train/complex": 25504,
38
+ "train/dimer_hetero": 11300,
39
+ "train/dimer_homo": 36652,
40
+ "train/monomer_long": 31318,
41
+ "train/monomer_medium": 141576,
42
+ "train/monomer_short": 229619,
43
+ "unused/complex": 3661,
44
+ "unused/dimer_hetero": 1222,
45
+ "unused/dimer_homo": 2562,
46
+ "unused/long": 29669,
47
+ "unused/monomer_long": 2277,
48
+ "unused/monomer_medium": 8196,
49
+ "unused/monomer_short": 20690,
50
+ "validation/complex": 64,
51
+ "validation/dimer_hetero": 48,
52
+ "validation/dimer_homo": 48,
53
+ "validation/monomer_long": 32,
54
+ "validation/monomer_medium": 32,
55
+ "validation/monomer_short": 32
56
+ },
57
+ "train_targets": 475969,
58
+ "pilot_components_excluded_from_heldout": 1068,
59
+ "pilot_final_test_clusters_excluded_from_train": 146,
60
+ "mmseqs": {
61
+ "min_seq_id": 0.4,
62
+ "coverage": 0.8,
63
+ "cov_mode": 0
64
+ },
65
+ "seed": 20260917
66
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/inputs/training-report.json ADDED
@@ -0,0 +1,715 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "status": "complete",
3
+ "model_id": "esmfold2_300",
4
+ "updates": 780,
5
+ "stopped_by": "planned_updates",
6
+ "elapsed_hours": 18.087229420995833,
7
+ "final_validation": {
8
+ "plddt_ce": 2.734289605403319,
9
+ "pae_ce": 2.784104924299754,
10
+ "total_ce": 5.518394529703073,
11
+ "target_plddt_spearman": 0.9407573243305103,
12
+ "within_target_plddt_accuracy": 0.5454545454545454,
13
+ "within_target_plddt_pairs": 99.0,
14
+ "within_target_iptm_accuracy": 0.4797979797979798,
15
+ "within_target_iptm_pairs": 396.0,
16
+ "calibration_error_10bin": 0.005547888357950776
17
+ },
18
+ "best_validation": {
19
+ "plddt_ce": 2.734289605403319,
20
+ "pae_ce": 2.784104924299754,
21
+ "total_ce": 5.518394529703073,
22
+ "target_plddt_spearman": 0.9407573243305103,
23
+ "within_target_plddt_accuracy": 0.5454545454545454,
24
+ "within_target_plddt_pairs": 99.0,
25
+ "within_target_iptm_accuracy": 0.4797979797979798,
26
+ "within_target_iptm_pairs": 396.0,
27
+ "calibration_error_10bin": 0.005547888357950776,
28
+ "update": 780
29
+ },
30
+ "selected_checkpoint": "final-ema.safetensors",
31
+ "wandb_url": "https://wandb.ai/lhallee/fastplms-confidence/runs/9558b6d23daf",
32
+ "config": {
33
+ "model_id": "esmfold2_300",
34
+ "samples_per_target": 4,
35
+ "targets_per_update": 16,
36
+ "learning_rate": 0.0001,
37
+ "minimum_learning_rate": 1e-05,
38
+ "weight_decay": 0.01,
39
+ "warmup_updates": 78,
40
+ "planned_updates": 780,
41
+ "ema_decay": 0.9871794871794872,
42
+ "gradient_clip": 1.0,
43
+ "pae_weight": 1.0,
44
+ "ranking_weight": 0.5,
45
+ "ranking_margin": 0.01,
46
+ "ranking_temperature": 0.05,
47
+ "monomer_fraction": 0.5,
48
+ "validation_interval_seconds": 5400,
49
+ "checkpoint_interval_seconds": 1800,
50
+ "maximum_seconds": 73800,
51
+ "validation_limit": null,
52
+ "num_loops": 3,
53
+ "num_sampling_steps": 50,
54
+ "seed": 17
55
+ },
56
+ "provenance": {
57
+ "model_id": "esmfold2_300",
58
+ "base_repo": "Synthyra/ESMFold2-300",
59
+ "base_revision": "a38a62ae930d157484b331c2bf4241684573adba",
60
+ "base_weight_sha256": "44d6797c5efebf24753d502b40950e0874871c96ceea14f2d7f7e39cebac67fd",
61
+ "donor_repo": "biohub/ESMFold2-Experimental-Fast-Cutoff2025",
62
+ "donor_revision": "74b88548bf19688b8727432db0d698cb2e1d8783",
63
+ "donor_weight_sha256": "4e903b740ad6ad704ec60881bfd593e0d6c874a630ffa0f0838276e0b665088f",
64
+ "targets": {
65
+ "train": {
66
+ "count": 475969,
67
+ "sha256": "a62feb57800aa1e123f2f0f2c36409ff2f37d98348269fd33728efe72f29bc0b"
68
+ },
69
+ "validation": {
70
+ "count": 256,
71
+ "sha256": "6e05ac9e51d33fdbfb23b924f16af472419747c0e7c3904a252760bdd4f8f2f3"
72
+ }
73
+ },
74
+ "source_files": {
75
+ "src/fastplms/models.toml": {
76
+ "size": 83488,
77
+ "sha256": "0967a7805cd5ba107825a7dc473008d49c0334bd18714e1dfa9e51d0c42ee6f1"
78
+ },
79
+ "src/fastplms/__init__.py": {
80
+ "size": 1857,
81
+ "sha256": "8503e02debf24abc6d33c1913ff3eb9f245e63f7e62017e220d072c7393fdf2c"
82
+ },
83
+ "src/fastplms/attention/__init__.py": {
84
+ "size": 2259,
85
+ "sha256": "ae5c77f7293ae4a411fe1e57ac1e0ba69d47c077de8e46f6561f9af58ba2b5e2"
86
+ },
87
+ "src/fastplms/attention/_auto.py": {
88
+ "size": 7050,
89
+ "sha256": "d7adc2c3d9bb1a5b301e1a379ce28983f134ddbac9b44a3cf5bbf322cd7139a5"
90
+ },
91
+ "src/fastplms/attention/_core.py": {
92
+ "size": 35863,
93
+ "sha256": "3f3a09c590f566cb77d9586fd8ccff48496a67be0ace20e3db90165b54ffa07e"
94
+ },
95
+ "src/fastplms/attention/_kernel_lock.py": {
96
+ "size": 7063,
97
+ "sha256": "17adb859c994676b81df142e61d26ee5a723080c2a4fabc78c650b57300d51f8"
98
+ },
99
+ "src/fastplms/attention/interfaces.py": {
100
+ "size": 16976,
101
+ "sha256": "3b538e4b109f57b2a3a74cb1f0f7cbe8b43b6b6479f7161475cc1ec9bb260a08"
102
+ },
103
+ "src/fastplms/embeddings/__init__.py": {
104
+ "size": 1505,
105
+ "sha256": "cf0648de905a00ad16c0aece328eeb05f25739a4cf89b47b915e0f2b19c3ce26"
106
+ },
107
+ "src/fastplms/embeddings/batches.py": {
108
+ "size": 16175,
109
+ "sha256": "569693978dafddf585e45789b6ea9b45246c604def422f3c13dae54396503a25"
110
+ },
111
+ "src/fastplms/embeddings/identity.py": {
112
+ "size": 21198,
113
+ "sha256": "9508d14d2a997250e388dd94d2357eee28792e5da67509e917179160e627720d"
114
+ },
115
+ "src/fastplms/embeddings/inputs.py": {
116
+ "size": 9833,
117
+ "sha256": "b9c3f3eb228a6b21948afc141bd148d4d976cd4c142a9f180f36c33d6ff99599"
118
+ },
119
+ "src/fastplms/embeddings/output.py": {
120
+ "size": 9082,
121
+ "sha256": "1b86275772880de0f4ee51d7a125a877dab086cf56a4ec257dce7b9805cc8289"
122
+ },
123
+ "src/fastplms/embeddings/pooling.py": {
124
+ "size": 9876,
125
+ "sha256": "a393e78523e1fcb7362755619a580ea443814a410a995d90bd2d90f5b1d57bd9"
126
+ },
127
+ "src/fastplms/embeddings/runner.py": {
128
+ "size": 18432,
129
+ "sha256": "26371501163a88957701d9c4f4f6dbdc017c4b9ca3fb88cadc1b164c9334d565"
130
+ },
131
+ "src/fastplms/embeddings/storage.py": {
132
+ "size": 66427,
133
+ "sha256": "2091a59482370ed8830aa12cd8fde3d61e23a78368ee8267a89f8b7feb83cad3"
134
+ },
135
+ "src/fastplms/embeddings/types.py": {
136
+ "size": 6463,
137
+ "sha256": "c58f8c6a37a11a937c3f77b4e1617d5f213923d98ecaffddcdd283bd9dc42fe7"
138
+ },
139
+ "src/fastplms/models/__init__.py": {
140
+ "size": 336,
141
+ "sha256": "d3dd084f5e8fafcf2d0fe4a26e4ab9284d3f9414b1f9a5bd86e308a406447c43"
142
+ },
143
+ "src/fastplms/models/_diffusion_generation.py": {
144
+ "size": 20233,
145
+ "sha256": "1cadcca445ee9faa97f54cc1e47c30bb106d77344a7a91779b73f7517180b370"
146
+ },
147
+ "src/fastplms/models/_esm_rotary.py": {
148
+ "size": 4445,
149
+ "sha256": "b9b107633e9eb434b93a4f4cc0393bb8454d1a4ad67722038d177dffddd802b5"
150
+ },
151
+ "src/fastplms/models/ankh/__init__.py": {
152
+ "size": 0,
153
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
154
+ },
155
+ "src/fastplms/models/ankh/modeling_ankh.py": {
156
+ "size": 65086,
157
+ "sha256": "25f67d1e62da5bf3f2f9b1ce7bf032b6e0c4c3327f30eae05dd76037f9a08634"
158
+ },
159
+ "src/fastplms/models/boltz/__init__.py": {
160
+ "size": 347,
161
+ "sha256": "776dd9df11291750ddc4389f5f58fdd52c7e596db4b95c28129cb639f3903c43"
162
+ },
163
+ "src/fastplms/models/boltz/_pair_attention.py": {
164
+ "size": 1816,
165
+ "sha256": "736c4553adc2b871b04db325fbd2d8ee6f1c18bbb4ffacb440a5c2d76304169b"
166
+ },
167
+ "src/fastplms/models/boltz/cif_writer.py": {
168
+ "size": 5779,
169
+ "sha256": "6a6124240c4c9ffdc6de67df731c1eb05aed5dbaae60dd0192ab3b31c9556d42"
170
+ },
171
+ "src/fastplms/models/boltz/minimal_featurizer.py": {
172
+ "size": 38227,
173
+ "sha256": "c896a132c505e13d35aa51dd68eb78c37e873010d5c402f0ab78cf43bf9dd3cf"
174
+ },
175
+ "src/fastplms/models/boltz/minimal_structures.py": {
176
+ "size": 514,
177
+ "sha256": "41715893ae68fd75a6b47e7ef99c4db50eb460223d09717e5f6c074f39c59a68"
178
+ },
179
+ "src/fastplms/models/boltz/modeling_boltz2.py": {
180
+ "size": 46081,
181
+ "sha256": "6ff78cfcbe10cfdb2fdd2da15ed9f6a7e37f1bc6ed66b2e168506e14ccbb36f9"
182
+ },
183
+ "src/fastplms/models/boltz/vb_const.py": {
184
+ "size": 7587,
185
+ "sha256": "4b31e76f49710b19ce8ce9bb4cb2906bee79c000d1f0960e2440fd25ad9f967d"
186
+ },
187
+ "src/fastplms/models/boltz/vb_layers_attention.py": {
188
+ "size": 3797,
189
+ "sha256": "71918a961e16c2133b69274eea77e73d11325a79d2e117da452163606e0982c0"
190
+ },
191
+ "src/fastplms/models/boltz/vb_layers_attentionv2.py": {
192
+ "size": 2776,
193
+ "sha256": "50297a67887a95ba74bf583b7fb90c3e74d391118f484a39d8f419d6c0d43bb5"
194
+ },
195
+ "src/fastplms/models/boltz/vb_layers_confidence_utils.py": {
196
+ "size": 10427,
197
+ "sha256": "77099208f4bbd18b895ac1ef854ba1ee22762f64024037f95712c6f6b537b8fb"
198
+ },
199
+ "src/fastplms/models/boltz/vb_layers_dropout.py": {
200
+ "size": 1505,
201
+ "sha256": "311c1c9770c23df5148c066e8c8a054d6a32830c9800d46ba9f17e74670fb8cd"
202
+ },
203
+ "src/fastplms/models/boltz/vb_layers_initialize.py": {
204
+ "size": 3152,
205
+ "sha256": "c0e52df5833c3459761a4d042d7d3afff7e336cf4e8d3e66a59c6358c268e2c0"
206
+ },
207
+ "src/fastplms/models/boltz/vb_layers_outer_product_mean.py": {
208
+ "size": 4267,
209
+ "sha256": "107d37a5572322e45bb279f164dada9e9fbc8542a245ce65342727aed2bc7390"
210
+ },
211
+ "src/fastplms/models/boltz/vb_layers_pair_averaging.py": {
212
+ "size": 4487,
213
+ "sha256": "cbec19c03dada6185bd053d50b01fcbf7958a839449dda24d465d98412199806"
214
+ },
215
+ "src/fastplms/models/boltz/vb_layers_pairformer.py": {
216
+ "size": 11493,
217
+ "sha256": "8de7846d1ff203e88368ce9dd26bdb91c6150991994413b5ca173714e425ec56"
218
+ },
219
+ "src/fastplms/models/boltz/vb_layers_transition.py": {
220
+ "size": 3093,
221
+ "sha256": "0a1ce258ce88f1571937b4141fb94e39e700cb6e2538400c9468bc0db6ac6ad4"
222
+ },
223
+ "src/fastplms/models/boltz/vb_layers_triangular_mult.py": {
224
+ "size": 4753,
225
+ "sha256": "fc37d98cd6b0be23e497dce53a05332460f2fa37f782f9a948e25abc254942c7"
226
+ },
227
+ "src/fastplms/models/boltz/vb_loss_diffusionv2.py": {
228
+ "size": 6506,
229
+ "sha256": "8a596179bf54f47334bb7da5fb3383581b7a2c3db28879d7c42019a31f5395cd"
230
+ },
231
+ "src/fastplms/models/boltz/vb_modules_confidencev2.py": {
232
+ "size": 25062,
233
+ "sha256": "cfa10e8f10405b230bd764f702c0d39f17ab7b42386df0e59adc681467d1f365"
234
+ },
235
+ "src/fastplms/models/boltz/vb_modules_diffusion_conditioning.py": {
236
+ "size": 4873,
237
+ "sha256": "ab4a9e5a7ccbdac62ff3cc4e04b65188bd442d2ede036ca7971fbefded95990f"
238
+ },
239
+ "src/fastplms/models/boltz/vb_modules_diffusionv2.py": {
240
+ "size": 30705,
241
+ "sha256": "717e6475df080f5941804cfbdfb6a193d5ecd788ea9a01e0dbb073c65460663d"
242
+ },
243
+ "src/fastplms/models/boltz/vb_modules_encodersv2.py": {
244
+ "size": 25374,
245
+ "sha256": "97f0db310f5bbc07da9eee7cb1e6c1bcbe24bc6154add0de932a88b094928193"
246
+ },
247
+ "src/fastplms/models/boltz/vb_modules_transformersv2.py": {
248
+ "size": 10639,
249
+ "sha256": "b5a7d235fe6212a47be6cd7d0e9765bb4475c901d9cc79b199c153910e7ec282"
250
+ },
251
+ "src/fastplms/models/boltz/vb_modules_trunkv2.py": {
252
+ "size": 25162,
253
+ "sha256": "b4429c720b6f324335e6483222b438bc7f6b1ddbc46f9ba2e6180b96819252e9"
254
+ },
255
+ "src/fastplms/models/boltz/vb_modules_utils.py": {
256
+ "size": 11567,
257
+ "sha256": "9d7e416062733c40283a32d38ed547ad9b160d9e66c5d4e3ee179c6f0e7ff055"
258
+ },
259
+ "src/fastplms/models/boltz/vb_potentials_potentials.py": {
260
+ "size": 36675,
261
+ "sha256": "62f654f99407f87f24b1753354478f72b0833d5c302323234e800b0d35b48cc9"
262
+ },
263
+ "src/fastplms/models/boltz/vb_potentials_schedules.py": {
264
+ "size": 2391,
265
+ "sha256": "41c4e59b4af49532dd81e7275413eb31582257ce4af85e33c364394644fbc4ad"
266
+ },
267
+ "src/fastplms/models/boltz/vb_tri_attn_attention.py": {
268
+ "size": 4719,
269
+ "sha256": "96cf947c9d47ccabf104a8dc558cf1b3d94f946ee2b9bc4f90e0fea7e1c131bc"
270
+ },
271
+ "src/fastplms/models/boltz/vb_tri_attn_primitives.py": {
272
+ "size": 9812,
273
+ "sha256": "746538afff040a5de4dd1f93e35a3547e1d08692056dac137de858e4e58baecd"
274
+ },
275
+ "src/fastplms/models/boltz/vb_tri_attn_utils.py": {
276
+ "size": 11300,
277
+ "sha256": "c5fb4adf3110de5699a7c1f639003413b3f8f4a106bd7ae4a3f89486be75b35e"
278
+ },
279
+ "src/fastplms/models/classification_probe.py": {
280
+ "size": 20365,
281
+ "sha256": "5efe95feab4674174ac88d30f9e0659d6c0f8035851b5bc351f3738d479e93a9"
282
+ },
283
+ "src/fastplms/models/dplm/__init__.py": {
284
+ "size": 0,
285
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
286
+ },
287
+ "src/fastplms/models/dplm/modeling_dplm.py": {
288
+ "size": 55368,
289
+ "sha256": "9b7f1ffebf82aa23d7ad763ca910fa897c27b6b5401b9f04f925bde65a3d70a5"
290
+ },
291
+ "src/fastplms/models/dplm2/__init__.py": {
292
+ "size": 127,
293
+ "sha256": "cda00bad9b68061cd2b480863507bb33d9b307f96ae9c454ce26fed746e33776"
294
+ },
295
+ "src/fastplms/models/dplm2/modeling_dplm2.py": {
296
+ "size": 58263,
297
+ "sha256": "6d037e4170452dfe0fffa69659b09175c3a2b032c03e05647e2a5fba37f0daa2"
298
+ },
299
+ "src/fastplms/models/dplm2/tokenization_dplm2.py": {
300
+ "size": 3761,
301
+ "sha256": "b527a626251adc4496d2046a048ea89f5f9326efcbc74114d766fd5b0736cdf2"
302
+ },
303
+ "src/fastplms/models/e1/__init__.py": {
304
+ "size": 0,
305
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
306
+ },
307
+ "src/fastplms/models/e1/attention.py": {
308
+ "size": 17944,
309
+ "sha256": "0800c4279b9beb8f9692eb030f375045448fd9d0afc5acfcb08f6e3f5b734d12"
310
+ },
311
+ "src/fastplms/models/e1/cache.py": {
312
+ "size": 9913,
313
+ "sha256": "bbe4a04036d0dc04b1b8d7fc40f67c19862d9e43180988aba26a2c20c9c9adc6"
314
+ },
315
+ "src/fastplms/models/e1/modeling_e1.py": {
316
+ "size": 98837,
317
+ "sha256": "60373e76e01de527a15c17e7377b4f78b77bf6519f2845ab32e3060c6b39d099"
318
+ },
319
+ "src/fastplms/models/e1/preparation.py": {
320
+ "size": 10628,
321
+ "sha256": "aad61cdd8bbbec9f410f7d4c2b327a0dddc9e612e2e007d359f883f693ed2a24"
322
+ },
323
+ "src/fastplms/models/e1/retrieval.py": {
324
+ "size": 71281,
325
+ "sha256": "7702c46763ff242d423a890edde33867e2273e82dc0bde43f6d92debce9d5f08"
326
+ },
327
+ "src/fastplms/models/esm2/__init__.py": {
328
+ "size": 0,
329
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
330
+ },
331
+ "src/fastplms/models/esm2/modeling_fastesm.py": {
332
+ "size": 45755,
333
+ "sha256": "e40442e9c2479b052b79a0912f375ca22c56ad5aa0dd75137e9bfabec9b1cefc"
334
+ },
335
+ "src/fastplms/models/esm3/__init__.py": {
336
+ "size": 303,
337
+ "sha256": "a2a678dc996ce8238c456cb667a5d63a342e28df72553546c6a8f5893f8f2545"
338
+ },
339
+ "src/fastplms/models/esm3/modeling_esm3.py": {
340
+ "size": 114023,
341
+ "sha256": "590cbf9a34ca439913c0b7d8221e8aef35bfaf98d7de533cc22df76d7d141995"
342
+ },
343
+ "src/fastplms/models/esm_plusplus/__init__.py": {
344
+ "size": 0,
345
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
346
+ },
347
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus.py": {
348
+ "size": 82069,
349
+ "sha256": "892ab6c3e69982713980ed83ecfb697c1842731b6415c9d0d448a1529942b0d2"
350
+ },
351
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus_sae.py": {
352
+ "size": 9994,
353
+ "sha256": "a8bc37695c29f0a91597bc8c95ff0516615944ac7ee35d18e56c23ebcd52ab5d"
354
+ },
355
+ "src/fastplms/models/esmfold/__init__.py": {
356
+ "size": 0,
357
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
358
+ },
359
+ "src/fastplms/models/esmfold/modeling_fast_esmfold.py": {
360
+ "size": 45830,
361
+ "sha256": "142b2aeb311bd8bfb6a0fa3a911d0ea9aefac27692afdfb34549fce0ac8b37fc"
362
+ },
363
+ "src/fastplms/models/esmfold2/__init__.py": {
364
+ "size": 2030,
365
+ "sha256": "167872850136ffb473f639dddc2323099bc534efe10fdad9fe2a799e444c7a18"
366
+ },
367
+ "src/fastplms/models/esmfold2/attention.py": {
368
+ "size": 1650,
369
+ "sha256": "3112740d2d5a27f8879b274159fae930f6949e80cf015c3f8d8405769e2ab5d7"
370
+ },
371
+ "src/fastplms/models/esmfold2/configuration_esmfold2.py": {
372
+ "size": 12403,
373
+ "sha256": "fc375b356c4df1c1deec26abafac7534e23d0568c0af76c39b204d6e5aaef27d"
374
+ },
375
+ "src/fastplms/models/esmfold2/embedding.py": {
376
+ "size": 4409,
377
+ "sha256": "43c045ebf0502ce801d0f0abf04c7b53b85ba27e8c3eceb546a3c0b1c0581aa3"
378
+ },
379
+ "src/fastplms/models/esmfold2/esmfold2_affine3d.py": {
380
+ "size": 24771,
381
+ "sha256": "7e5a109942e4e8c4f2a83281d2d8b83a04c7cefb7931b27eca6c146af47f2d85"
382
+ },
383
+ "src/fastplms/models/esmfold2/esmfold2_aligner.py": {
384
+ "size": 3050,
385
+ "sha256": "0ac5f9bbfcb98dfa2967070f5f3c6e63b0d5f8dec08afe50ec0c6c14520e2798"
386
+ },
387
+ "src/fastplms/models/esmfold2/esmfold2_atom_indexer.py": {
388
+ "size": 928,
389
+ "sha256": "388d11d06e45062aba55934c0bc32925998ed5d85525bec00bafd9d67b98dc6a"
390
+ },
391
+ "src/fastplms/models/esmfold2/esmfold2_conformers.py": {
392
+ "size": 16121,
393
+ "sha256": "d5be3080a08f672a1f7d6a5d523cf1fe7d7559e7324faa5c735ccd78b4ddad35"
394
+ },
395
+ "src/fastplms/models/esmfold2/esmfold2_constants.py": {
396
+ "size": 6060,
397
+ "sha256": "65f978329690b46c4a3cc9f4815fe439b1e355be03ef2a9134b83ab889958751"
398
+ },
399
+ "src/fastplms/models/esmfold2/esmfold2_constants_esm3.py": {
400
+ "size": 2913,
401
+ "sha256": "6f9c8bbf0f80b6cd9ede136d142b51ff2b84f1b339cb6b6668c2669e8c2584b5"
402
+ },
403
+ "src/fastplms/models/esmfold2/esmfold2_input_builder.py": {
404
+ "size": 6860,
405
+ "sha256": "3fccb115fa79ac88e5e2bb09a2b7273fbc1ae5ca540947eb27d1e827c46baa7b"
406
+ },
407
+ "src/fastplms/models/esmfold2/esmfold2_metrics.py": {
408
+ "size": 10448,
409
+ "sha256": "a3674d794414181b94e5d42c80941c28740893cbc8f3f65a0eabcfd1f18ac7d1"
410
+ },
411
+ "src/fastplms/models/esmfold2/esmfold2_misc.py": {
412
+ "size": 16193,
413
+ "sha256": "e79990024d597bdaaa093a90a342029a1cb044618d4935d7d1d12584fb560541"
414
+ },
415
+ "src/fastplms/models/esmfold2/esmfold2_mmcif_parsing.py": {
416
+ "size": 16610,
417
+ "sha256": "8ed0fe1afdc15f148509f92f850707b5cb8e9eff019b46552ac7a83c04f3c9b4"
418
+ },
419
+ "src/fastplms/models/esmfold2/esmfold2_molecular_complex.py": {
420
+ "size": 40861,
421
+ "sha256": "fbb5a616fd0a4335c21ea814cdec9c184815effd21521ff980e93ce0b1a86a1e"
422
+ },
423
+ "src/fastplms/models/esmfold2/esmfold2_msa.py": {
424
+ "size": 20888,
425
+ "sha256": "55aaf57d3e0e983971102ae9582aece9e6fd4cc339aed672b61be999ff945087"
426
+ },
427
+ "src/fastplms/models/esmfold2/esmfold2_msa_filter_sequences.py": {
428
+ "size": 4012,
429
+ "sha256": "964f888b71a41974f2ee172a93631c8f3c32f643e67d346ac04d5a27a29e58e5"
430
+ },
431
+ "src/fastplms/models/esmfold2/esmfold2_normalize_coordinates.py": {
432
+ "size": 3030,
433
+ "sha256": "3b3c9854d58f7e498e7b1b6ec2ffed139233f54bb3abcb9b64edc82d1f8aefdc"
434
+ },
435
+ "src/fastplms/models/esmfold2/esmfold2_output.py": {
436
+ "size": 7860,
437
+ "sha256": "eb2dba85fd9368b76d2c5e7c426cc51f4fc67ec9b16e6463dc3eee126db0d0cd"
438
+ },
439
+ "src/fastplms/models/esmfold2/esmfold2_paired_msa.py": {
440
+ "size": 9426,
441
+ "sha256": "7c5147677d05c8c11023c71c7ee95ddc3cd629e95fbe6bb59a1df4cf56b8174e"
442
+ },
443
+ "src/fastplms/models/esmfold2/esmfold2_parsing.py": {
444
+ "size": 3896,
445
+ "sha256": "9404c5d8514281712681c4bb2fbe694420e0b6612a361d1f0186d294e1f1fb5d"
446
+ },
447
+ "src/fastplms/models/esmfold2/esmfold2_predicted_aligned_error.py": {
448
+ "size": 4889,
449
+ "sha256": "eae9a59a5da8d7e54b319619162c235c880666d475ff495cd14d015c0bfa22b1"
450
+ },
451
+ "src/fastplms/models/esmfold2/esmfold2_prepare_input.py": {
452
+ "size": 40736,
453
+ "sha256": "b75323afe401531eb17d4c23454fa024448e0563f8f94ad7adc3f91522a7a27a"
454
+ },
455
+ "src/fastplms/models/esmfold2/esmfold2_processor.py": {
456
+ "size": 13210,
457
+ "sha256": "de878f5a2165951535dd177de9eb8322f35308c612bba6f0363fb825c3d8e1a1"
458
+ },
459
+ "src/fastplms/models/esmfold2/esmfold2_protein_chain.py": {
460
+ "size": 63543,
461
+ "sha256": "601b522c1c4d518e3751edede644e351ce9fff60229ca8029d2f69559f4a5812"
462
+ },
463
+ "src/fastplms/models/esmfold2/esmfold2_protein_complex.py": {
464
+ "size": 52765,
465
+ "sha256": "cb68d3ad8491390961e95dcb7f0726a6d249666f95fc046f233c3d56aa0a9bd5"
466
+ },
467
+ "src/fastplms/models/esmfold2/esmfold2_protein_structure.py": {
468
+ "size": 9884,
469
+ "sha256": "dddf87923bca888605cf84c89c11a24dcf6f500ec99bf6ad545faa5f9ca04998"
470
+ },
471
+ "src/fastplms/models/esmfold2/esmfold2_residue_constants.py": {
472
+ "size": 32920,
473
+ "sha256": "9c2fe8f454300d7a676fc7160003232dd9ff926e2b48289853c2636ac9ba2d4b"
474
+ },
475
+ "src/fastplms/models/esmfold2/esmfold2_sequential_dataclass.py": {
476
+ "size": 3929,
477
+ "sha256": "453657d127b6a78371f760fcf0cedfeaef8bb5024eeb7a1ffa66742323c279cf"
478
+ },
479
+ "src/fastplms/models/esmfold2/esmfold2_system.py": {
480
+ "size": 1602,
481
+ "sha256": "5916250a3fa873983f06af668823c940813802a3db576bccf4e3343103564b7f"
482
+ },
483
+ "src/fastplms/models/esmfold2/esmfold2_types.py": {
484
+ "size": 876,
485
+ "sha256": "2ab7e6fe0e228f6c579ed4aa96a097f9904bd3c11253434994be7b04952f35bb"
486
+ },
487
+ "src/fastplms/models/esmfold2/esmfold2_utils_types.py": {
488
+ "size": 1060,
489
+ "sha256": "d00f3cd100b0151859831cd187d7fdb49d3aeda631544205d2ca63bb7d710879"
490
+ },
491
+ "src/fastplms/models/esmfold2/modeling_esmfold2.py": {
492
+ "size": 87462,
493
+ "sha256": "3bbdbe7c502a1b61926e0b3b2aee148deabaa97537dbc58622e8e10cca76b9a7"
494
+ },
495
+ "src/fastplms/models/esmfold2/modeling_esmfold2_classification.py": {
496
+ "size": 9423,
497
+ "sha256": "5f46ab5bac2359bf541551967b2652545892467456042023819a7f5cb9036388"
498
+ },
499
+ "src/fastplms/models/esmfold2/modeling_esmfold2_common.py": {
500
+ "size": 125129,
501
+ "sha256": "ec43392fce2a5d4b4bf258c4239a7d690b79d2197fb1f21ceb1059e78951ba44"
502
+ },
503
+ "src/fastplms/models/esmfold2/modeling_esmfold2_experimental.py": {
504
+ "size": 49957,
505
+ "sha256": "9e28a4b6d6c4d31b7eabae377fe11f65f50fb2b6a1746146c1cd1ba0ca595bf6"
506
+ },
507
+ "src/fastplms/models/esmfold2/protein_utils.py": {
508
+ "size": 8093,
509
+ "sha256": "b7f40b19dc2c20e144b8fe3ccd0dbb2ec846526d015d6c8c922802d741be1f46"
510
+ },
511
+ "src/fastplms/models/esmfold2/reproducibility.py": {
512
+ "size": 1743,
513
+ "sha256": "18f13e266c9db67093fe756ca07bb93bb136a8e7b783a12d46bab82d0c69778d"
514
+ },
515
+ "src/fastplms/models/ttt.py": {
516
+ "size": 37758,
517
+ "sha256": "bbcd0d46cb2e1815f86cdb3d710fb89b2539a18d8ff03ce9306e88ca72d70309"
518
+ },
519
+ "src/fastplms/registry.py": {
520
+ "size": 68948,
521
+ "sha256": "c370419b34fc86a32c757b26601847be413a6b24384d435934d0431b99823d92"
522
+ },
523
+ "src/fastplms/runtime.py": {
524
+ "size": 2541,
525
+ "sha256": "9521c37fcd168bf9a4137277fb73672403ccf30d70d4845aa879fb22f42ddeb6"
526
+ },
527
+ "tools/confidence/__init__.py": {
528
+ "size": 58,
529
+ "sha256": "906ebf189faecc0e4db0667e06235ddedb5f55ccb8764007cefb94bebab4d1e2"
530
+ },
531
+ "tools/confidence/acceptance.py": {
532
+ "size": 11760,
533
+ "sha256": "8039c46a56731d560a50d6ea256f4b3241cd899049b40aaa23d01e5aa73246c6"
534
+ },
535
+ "tools/confidence/artifact_validation.py": {
536
+ "size": 4870,
537
+ "sha256": "39a762846cce12596318a84db9858ba4699763639a0c2d78a9e0a1c912b310ba"
538
+ },
539
+ "tools/confidence/budget.py": {
540
+ "size": 534,
541
+ "sha256": "5ff3392d24db6569c8104ac614f3318a1cdba57c09cc9b3207ebd7e936f974d2"
542
+ },
543
+ "tools/confidence/cache.py": {
544
+ "size": 24237,
545
+ "sha256": "0fb7cc37ffc340fd16c61f44cba3f7462593638aef3937f12fe8c4ff791001cf"
546
+ },
547
+ "tools/confidence/campaign.py": {
548
+ "size": 6460,
549
+ "sha256": "a4e91bfa6da4db22526a2ea21a671117d033c014158410c4678fa21593d8a821"
550
+ },
551
+ "tools/confidence/config.py": {
552
+ "size": 1708,
553
+ "sha256": "342e6fdf9cd8a7cd7f3f455e519b3ebd63132001b1c95e8ad4b8c5cf05077d9f"
554
+ },
555
+ "tools/confidence/data.py": {
556
+ "size": 33870,
557
+ "sha256": "acdbad582e458d05946b6403e2f42db59fe48a5b970dd01123be2951aea2bdaa"
558
+ },
559
+ "tools/confidence/evaluation.py": {
560
+ "size": 15661,
561
+ "sha256": "ef00a4ce9a27f2561689496e114cbc6d160bc186e6c1214cbb7ff1be23733992"
562
+ },
563
+ "tools/confidence/experiment_artifacts.py": {
564
+ "size": 22122,
565
+ "sha256": "91af0497832eca1ba75c1485406e1e7bae4f6552123aff70b2f9c4be9304edff"
566
+ },
567
+ "tools/confidence/gpu_benchmark.py": {
568
+ "size": 5686,
569
+ "sha256": "cb95a65622fd21bb4f31a981e914ff1f2c38a956f5c1e564c3038c7db25bed82"
570
+ },
571
+ "tools/confidence/host.py": {
572
+ "size": 24692,
573
+ "sha256": "846960995b4f93a1f1e7215214789a61a70cdc1d8daa3f5f6c8cc628f20c6929"
574
+ },
575
+ "tools/confidence/labels.py": {
576
+ "size": 11283,
577
+ "sha256": "6eb50c11860f6b379f257586b7918dcfe4ef60b1fb84268c1909ea95bafcf7dd"
578
+ },
579
+ "tools/confidence/launch.py": {
580
+ "size": 9672,
581
+ "sha256": "472445e07620269e367350ab897f33ca174d1e03cafbcc026c8e4496a9d0ebcc"
582
+ },
583
+ "tools/confidence/launch_v2.py": {
584
+ "size": 1061,
585
+ "sha256": "a161789a040640faceb31ba8e8b78ebcde5b568505d23f10cac684b744e6ebdc"
586
+ },
587
+ "tools/confidence/metrics.py": {
588
+ "size": 15585,
589
+ "sha256": "cb9fca1f26616bc8ac0330976f8d52cede3b5ef61769221821e4de202e93b36a"
590
+ },
591
+ "tools/confidence/migration.py": {
592
+ "size": 9152,
593
+ "sha256": "ce4d841e236c0e984fa06edb25d22fbf3c782b9d779b98127032da7425e85982"
594
+ },
595
+ "tools/confidence/modal_app.py": {
596
+ "size": 11872,
597
+ "sha256": "bd543c788a3e07b76b368dec966ac62f41880437b8697fd443171d3bbd4c146b"
598
+ },
599
+ "tools/confidence/modal_gpu_benchmark.py": {
600
+ "size": 3916,
601
+ "sha256": "a359c911c70d10c82c41e186ec53f1ae66063fb7cc74a5beaf09b97b6f525c0b"
602
+ },
603
+ "tools/confidence/modal_resume.py": {
604
+ "size": 4021,
605
+ "sha256": "3a0f6615180d1040e146a5d1e1702ee1bb3446cb65cb86e00113e3a80de97eaa"
606
+ },
607
+ "tools/confidence/modal_v2.py": {
608
+ "size": 9844,
609
+ "sha256": "bfd4180dbf152fd4a3a2ed01d9049489ce15798f1b4333ea8d4933636508d864"
610
+ },
611
+ "tools/confidence/online_smoke.py": {
612
+ "size": 17889,
613
+ "sha256": "a95b72b4ba244a9289dbcfecfc3201d4c033b3e41c2d6fe18a3b0ffd5a9b8f0a"
614
+ },
615
+ "tools/confidence/online_training.py": {
616
+ "size": 32956,
617
+ "sha256": "9326012b780bd739841f930c7fb08431e1b615b334581376a006c9b7fa9d44a4"
618
+ },
619
+ "tools/confidence/packaging.py": {
620
+ "size": 8909,
621
+ "sha256": "efd50d289d0a35e6634428ad37ed0812c5a00607924fb3159796b95e5a70a9bb"
622
+ },
623
+ "tools/confidence/ranking.py": {
624
+ "size": 3677,
625
+ "sha256": "32db0f3f46d8dc7770ad8a280169ed8fb2888024dd0d66964c3d7f0ab97de578"
626
+ },
627
+ "tools/confidence/recompute.py": {
628
+ "size": 10462,
629
+ "sha256": "e19c11e77632e70ca0d4dd9eb66dff0a0e04e4a5bb4db36148e6532edc10e225"
630
+ },
631
+ "tools/confidence/release.py": {
632
+ "size": 8949,
633
+ "sha256": "3ea71eac204b6c8f3c8783894544a06cd8101b0d23c1c3e5e4b4735fcce25201"
634
+ },
635
+ "tools/confidence/rollouts.py": {
636
+ "size": 21348,
637
+ "sha256": "1dad3e3e0dca8d8aa56070efd7b23dd4ffefd4109aab33c2f05843e87f940f1d"
638
+ },
639
+ "tools/confidence/selection.py": {
640
+ "size": 1003,
641
+ "sha256": "dd0e9c87dd48f63159b997e801bb0595f1ebf5c9eaed1f5b2bab1a3543054cf1"
642
+ },
643
+ "tools/confidence/splits.py": {
644
+ "size": 5417,
645
+ "sha256": "3ea939c6b6621c3e6e3eea14a1a08c682936fbebcb4c84a31ede7318f30fdbf4"
646
+ },
647
+ "tools/confidence/ssh.py": {
648
+ "size": 7530,
649
+ "sha256": "e80d0904563e71c343742e31093ba812c173039ac255317caf471c1c069cf538"
650
+ },
651
+ "tools/confidence/structure_metrics.py": {
652
+ "size": 13711,
653
+ "sha256": "a0b8825b367d0112b5a5e8acd06e66441067b049bfe1932df9390ec92c26d71b"
654
+ },
655
+ "tools/confidence/target_pool.py": {
656
+ "size": 11433,
657
+ "sha256": "fee32a81939c31276fce9a6e2dedd68ade5b135eb3a3e345f02ec6f4d523377c"
658
+ },
659
+ "tools/confidence/target_splits.py": {
660
+ "size": 8602,
661
+ "sha256": "15dcec9e83cda07562231bcc13212d7bce47303c8e7c94d9297e2a814bd62946"
662
+ },
663
+ "tools/confidence/test_evaluation.py": {
664
+ "size": 16800,
665
+ "sha256": "6a9998a1e11d325c16b21ef47d3abdc89f2ec7a8a1d212994577191ef10fceca"
666
+ },
667
+ "tools/confidence/training.py": {
668
+ "size": 37010,
669
+ "sha256": "e87056dfcf26cd98b4c42b191154f8bafe63622d3574db2220d0cc1c32399069"
670
+ },
671
+ "tools/confidence/v2_analysis.py": {
672
+ "size": 9958,
673
+ "sha256": "d6c41100acacfad1922ad43aa9b453ffcead3c36876230b80ebe0ddbffa4121e"
674
+ },
675
+ "tools/confidence/v2_campaign.py": {
676
+ "size": 7959,
677
+ "sha256": "1af9e0b526b2e0b0dd2cfcb6317551782c8b8a7576662eb4c85dcaf286f387d8"
678
+ },
679
+ "tools/confidence/v2_records.py": {
680
+ "size": 2110,
681
+ "sha256": "57a5be646cc29637b36732bf3927115a8f879cf0d91d82b26d5b850628ae86da"
682
+ },
683
+ "tools/confidence/workflow.py": {
684
+ "size": 12886,
685
+ "sha256": "abe8624dd5b980dcac43864e19649a4058bfed8fb8207d9014b0f50decadb1db"
686
+ },
687
+ "tools/execution/__init__.py": {
688
+ "size": 77,
689
+ "sha256": "1aa67ededb225e478f19423c2e70deacfd00a4734d6116c8ccc6eafb4a6fd4f8"
690
+ },
691
+ "tools/execution/budget.py": {
692
+ "size": 5146,
693
+ "sha256": "7bde890c6dad647d23208460085f92b93d6f9e497a85b5cb0b6e1a5c33514534"
694
+ },
695
+ "tools/execution/pricing.py": {
696
+ "size": 611,
697
+ "sha256": "a1758c1a0df12cb08612c40167a9df87975abb2c170d227ccf775009dbfb3d80"
698
+ },
699
+ "tools/execution/source.py": {
700
+ "size": 6786,
701
+ "sha256": "2dd3694f5975f571db741084ac1d56b6dd693818ef323f013dae21e8bbde7339"
702
+ }
703
+ }
704
+ },
705
+ "checkpoint_files": {
706
+ "best-ema.safetensors": {
707
+ "size": 31082180,
708
+ "sha256": "40fd7f3d82fcefe8ad20ab2b32a37a68a84b54a527a4bce6eb9437bad2b77e31"
709
+ },
710
+ "final-ema.safetensors": {
711
+ "size": 31082180,
712
+ "sha256": "40fd7f3d82fcefe8ad20ab2b32a37a68a84b54a527a4bce6eb9437bad2b77e31"
713
+ }
714
+ }
715
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/records.json ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7159e5ceb48fc8ed8a68525da5f7a15a395f5cdea252c3d7c0ba7882b4033bc8
3
+ size 24350886
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/request.json ADDED
@@ -0,0 +1,754 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema_version": 1,
3
+ "evaluation_id": "v2-reproduction-20260922",
4
+ "model_id": "esmfold2_300",
5
+ "created_at": "2026-09-23T13:37:24.330566+00:00",
6
+ "split": "test",
7
+ "test_set_status": "spent",
8
+ "new_heldout_evaluation": false,
9
+ "requested_targets": 576,
10
+ "checkpoint_inputs": {
11
+ "v2": {
12
+ "source_name": "final-ema.safetensors",
13
+ "snapshot": "checkpoints/v2.safetensors",
14
+ "size": 31082180,
15
+ "sha256": "40fd7f3d82fcefe8ad20ab2b32a37a68a84b54a527a4bce6eb9437bad2b77e31"
16
+ },
17
+ "pilot": {
18
+ "source_name": "esmfold2_300-head.safetensors",
19
+ "snapshot": "checkpoints/pilot.safetensors",
20
+ "size": 31082180,
21
+ "sha256": "4dfc691e529617fc7cc0cd1ee60799ce1b496fdd0d17f0b4bb78b33a96c77733"
22
+ },
23
+ "donor": {
24
+ "source": "pinned_donor"
25
+ }
26
+ },
27
+ "metadata": {
28
+ "model": {
29
+ "repo_id": "Synthyra/ESMFold2-300",
30
+ "revision": "a38a62ae930d157484b331c2bf4241684573adba",
31
+ "files": [
32
+ {
33
+ "path": "config.json",
34
+ "algorithm": "git-sha1",
35
+ "digest": "47ec20cf8b234c3b41d6f3ae1bdfe95d4eb4849e"
36
+ },
37
+ {
38
+ "path": "model.safetensors",
39
+ "algorithm": "sha256",
40
+ "digest": "44d6797c5efebf24753d502b40950e0874871c96ceea14f2d7f7e39cebac67fd"
41
+ }
42
+ ]
43
+ },
44
+ "donor": {
45
+ "repo_id": "biohub/ESMFold2-Experimental-Fast-Cutoff2025",
46
+ "revision": "74b88548bf19688b8727432db0d698cb2e1d8783",
47
+ "weight_sha256": "4e903b740ad6ad704ec60881bfd593e0d6c874a630ffa0f0838276e0b665088f"
48
+ },
49
+ "inference": {
50
+ "samples": 5,
51
+ "seed_offset": 1000,
52
+ "seed_rule": "seed_offset + index_in_targets_json",
53
+ "recycling_loops": 3,
54
+ "diffusion_steps": 50,
55
+ "attention_backend": "sdpa",
56
+ "fast_folding_kernels": true,
57
+ "parameter_dtype": "float32",
58
+ "fold_autocast_dtype": "bfloat16",
59
+ "head_autocast_dtype": "bfloat16",
60
+ "esmc_precision": "bf16"
61
+ },
62
+ "dataset": {
63
+ "repo_id": "Synthyra/AtlasFold-Data",
64
+ "split_identity": "inputs/split-report.json"
65
+ },
66
+ "source_files": {
67
+ "src/fastplms/models.toml": {
68
+ "size": 83488,
69
+ "sha256": "0967a7805cd5ba107825a7dc473008d49c0334bd18714e1dfa9e51d0c42ee6f1"
70
+ },
71
+ "src/fastplms/__init__.py": {
72
+ "size": 1857,
73
+ "sha256": "8503e02debf24abc6d33c1913ff3eb9f245e63f7e62017e220d072c7393fdf2c"
74
+ },
75
+ "src/fastplms/attention/__init__.py": {
76
+ "size": 2259,
77
+ "sha256": "ae5c77f7293ae4a411fe1e57ac1e0ba69d47c077de8e46f6561f9af58ba2b5e2"
78
+ },
79
+ "src/fastplms/attention/_auto.py": {
80
+ "size": 7050,
81
+ "sha256": "d7adc2c3d9bb1a5b301e1a379ce28983f134ddbac9b44a3cf5bbf322cd7139a5"
82
+ },
83
+ "src/fastplms/attention/_core.py": {
84
+ "size": 35863,
85
+ "sha256": "3f3a09c590f566cb77d9586fd8ccff48496a67be0ace20e3db90165b54ffa07e"
86
+ },
87
+ "src/fastplms/attention/_kernel_lock.py": {
88
+ "size": 7063,
89
+ "sha256": "17adb859c994676b81df142e61d26ee5a723080c2a4fabc78c650b57300d51f8"
90
+ },
91
+ "src/fastplms/attention/interfaces.py": {
92
+ "size": 16976,
93
+ "sha256": "3b538e4b109f57b2a3a74cb1f0f7cbe8b43b6b6479f7161475cc1ec9bb260a08"
94
+ },
95
+ "src/fastplms/embeddings/__init__.py": {
96
+ "size": 1505,
97
+ "sha256": "cf0648de905a00ad16c0aece328eeb05f25739a4cf89b47b915e0f2b19c3ce26"
98
+ },
99
+ "src/fastplms/embeddings/batches.py": {
100
+ "size": 16175,
101
+ "sha256": "569693978dafddf585e45789b6ea9b45246c604def422f3c13dae54396503a25"
102
+ },
103
+ "src/fastplms/embeddings/identity.py": {
104
+ "size": 21198,
105
+ "sha256": "9508d14d2a997250e388dd94d2357eee28792e5da67509e917179160e627720d"
106
+ },
107
+ "src/fastplms/embeddings/inputs.py": {
108
+ "size": 9833,
109
+ "sha256": "b9c3f3eb228a6b21948afc141bd148d4d976cd4c142a9f180f36c33d6ff99599"
110
+ },
111
+ "src/fastplms/embeddings/output.py": {
112
+ "size": 9082,
113
+ "sha256": "1b86275772880de0f4ee51d7a125a877dab086cf56a4ec257dce7b9805cc8289"
114
+ },
115
+ "src/fastplms/embeddings/pooling.py": {
116
+ "size": 9876,
117
+ "sha256": "a393e78523e1fcb7362755619a580ea443814a410a995d90bd2d90f5b1d57bd9"
118
+ },
119
+ "src/fastplms/embeddings/runner.py": {
120
+ "size": 18432,
121
+ "sha256": "26371501163a88957701d9c4f4f6dbdc017c4b9ca3fb88cadc1b164c9334d565"
122
+ },
123
+ "src/fastplms/embeddings/storage.py": {
124
+ "size": 66427,
125
+ "sha256": "2091a59482370ed8830aa12cd8fde3d61e23a78368ee8267a89f8b7feb83cad3"
126
+ },
127
+ "src/fastplms/embeddings/types.py": {
128
+ "size": 6463,
129
+ "sha256": "c58f8c6a37a11a937c3f77b4e1617d5f213923d98ecaffddcdd283bd9dc42fe7"
130
+ },
131
+ "src/fastplms/models/__init__.py": {
132
+ "size": 336,
133
+ "sha256": "d3dd084f5e8fafcf2d0fe4a26e4ab9284d3f9414b1f9a5bd86e308a406447c43"
134
+ },
135
+ "src/fastplms/models/_diffusion_generation.py": {
136
+ "size": 20233,
137
+ "sha256": "1cadcca445ee9faa97f54cc1e47c30bb106d77344a7a91779b73f7517180b370"
138
+ },
139
+ "src/fastplms/models/_esm_rotary.py": {
140
+ "size": 4445,
141
+ "sha256": "b9b107633e9eb434b93a4f4cc0393bb8454d1a4ad67722038d177dffddd802b5"
142
+ },
143
+ "src/fastplms/models/ankh/__init__.py": {
144
+ "size": 0,
145
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
146
+ },
147
+ "src/fastplms/models/ankh/modeling_ankh.py": {
148
+ "size": 65086,
149
+ "sha256": "25f67d1e62da5bf3f2f9b1ce7bf032b6e0c4c3327f30eae05dd76037f9a08634"
150
+ },
151
+ "src/fastplms/models/boltz/__init__.py": {
152
+ "size": 347,
153
+ "sha256": "776dd9df11291750ddc4389f5f58fdd52c7e596db4b95c28129cb639f3903c43"
154
+ },
155
+ "src/fastplms/models/boltz/_pair_attention.py": {
156
+ "size": 1816,
157
+ "sha256": "736c4553adc2b871b04db325fbd2d8ee6f1c18bbb4ffacb440a5c2d76304169b"
158
+ },
159
+ "src/fastplms/models/boltz/cif_writer.py": {
160
+ "size": 5779,
161
+ "sha256": "6a6124240c4c9ffdc6de67df731c1eb05aed5dbaae60dd0192ab3b31c9556d42"
162
+ },
163
+ "src/fastplms/models/boltz/minimal_featurizer.py": {
164
+ "size": 38227,
165
+ "sha256": "c896a132c505e13d35aa51dd68eb78c37e873010d5c402f0ab78cf43bf9dd3cf"
166
+ },
167
+ "src/fastplms/models/boltz/minimal_structures.py": {
168
+ "size": 514,
169
+ "sha256": "41715893ae68fd75a6b47e7ef99c4db50eb460223d09717e5f6c074f39c59a68"
170
+ },
171
+ "src/fastplms/models/boltz/modeling_boltz2.py": {
172
+ "size": 46081,
173
+ "sha256": "6ff78cfcbe10cfdb2fdd2da15ed9f6a7e37f1bc6ed66b2e168506e14ccbb36f9"
174
+ },
175
+ "src/fastplms/models/boltz/vb_const.py": {
176
+ "size": 7587,
177
+ "sha256": "4b31e76f49710b19ce8ce9bb4cb2906bee79c000d1f0960e2440fd25ad9f967d"
178
+ },
179
+ "src/fastplms/models/boltz/vb_layers_attention.py": {
180
+ "size": 3797,
181
+ "sha256": "71918a961e16c2133b69274eea77e73d11325a79d2e117da452163606e0982c0"
182
+ },
183
+ "src/fastplms/models/boltz/vb_layers_attentionv2.py": {
184
+ "size": 2776,
185
+ "sha256": "50297a67887a95ba74bf583b7fb90c3e74d391118f484a39d8f419d6c0d43bb5"
186
+ },
187
+ "src/fastplms/models/boltz/vb_layers_confidence_utils.py": {
188
+ "size": 10427,
189
+ "sha256": "77099208f4bbd18b895ac1ef854ba1ee22762f64024037f95712c6f6b537b8fb"
190
+ },
191
+ "src/fastplms/models/boltz/vb_layers_dropout.py": {
192
+ "size": 1505,
193
+ "sha256": "311c1c9770c23df5148c066e8c8a054d6a32830c9800d46ba9f17e74670fb8cd"
194
+ },
195
+ "src/fastplms/models/boltz/vb_layers_initialize.py": {
196
+ "size": 3152,
197
+ "sha256": "c0e52df5833c3459761a4d042d7d3afff7e336cf4e8d3e66a59c6358c268e2c0"
198
+ },
199
+ "src/fastplms/models/boltz/vb_layers_outer_product_mean.py": {
200
+ "size": 4267,
201
+ "sha256": "107d37a5572322e45bb279f164dada9e9fbc8542a245ce65342727aed2bc7390"
202
+ },
203
+ "src/fastplms/models/boltz/vb_layers_pair_averaging.py": {
204
+ "size": 4487,
205
+ "sha256": "cbec19c03dada6185bd053d50b01fcbf7958a839449dda24d465d98412199806"
206
+ },
207
+ "src/fastplms/models/boltz/vb_layers_pairformer.py": {
208
+ "size": 11493,
209
+ "sha256": "8de7846d1ff203e88368ce9dd26bdb91c6150991994413b5ca173714e425ec56"
210
+ },
211
+ "src/fastplms/models/boltz/vb_layers_transition.py": {
212
+ "size": 3093,
213
+ "sha256": "0a1ce258ce88f1571937b4141fb94e39e700cb6e2538400c9468bc0db6ac6ad4"
214
+ },
215
+ "src/fastplms/models/boltz/vb_layers_triangular_mult.py": {
216
+ "size": 4753,
217
+ "sha256": "fc37d98cd6b0be23e497dce53a05332460f2fa37f782f9a948e25abc254942c7"
218
+ },
219
+ "src/fastplms/models/boltz/vb_loss_diffusionv2.py": {
220
+ "size": 6506,
221
+ "sha256": "8a596179bf54f47334bb7da5fb3383581b7a2c3db28879d7c42019a31f5395cd"
222
+ },
223
+ "src/fastplms/models/boltz/vb_modules_confidencev2.py": {
224
+ "size": 25062,
225
+ "sha256": "cfa10e8f10405b230bd764f702c0d39f17ab7b42386df0e59adc681467d1f365"
226
+ },
227
+ "src/fastplms/models/boltz/vb_modules_diffusion_conditioning.py": {
228
+ "size": 4873,
229
+ "sha256": "ab4a9e5a7ccbdac62ff3cc4e04b65188bd442d2ede036ca7971fbefded95990f"
230
+ },
231
+ "src/fastplms/models/boltz/vb_modules_diffusionv2.py": {
232
+ "size": 30705,
233
+ "sha256": "717e6475df080f5941804cfbdfb6a193d5ecd788ea9a01e0dbb073c65460663d"
234
+ },
235
+ "src/fastplms/models/boltz/vb_modules_encodersv2.py": {
236
+ "size": 25374,
237
+ "sha256": "97f0db310f5bbc07da9eee7cb1e6c1bcbe24bc6154add0de932a88b094928193"
238
+ },
239
+ "src/fastplms/models/boltz/vb_modules_transformersv2.py": {
240
+ "size": 10639,
241
+ "sha256": "b5a7d235fe6212a47be6cd7d0e9765bb4475c901d9cc79b199c153910e7ec282"
242
+ },
243
+ "src/fastplms/models/boltz/vb_modules_trunkv2.py": {
244
+ "size": 25162,
245
+ "sha256": "b4429c720b6f324335e6483222b438bc7f6b1ddbc46f9ba2e6180b96819252e9"
246
+ },
247
+ "src/fastplms/models/boltz/vb_modules_utils.py": {
248
+ "size": 11567,
249
+ "sha256": "9d7e416062733c40283a32d38ed547ad9b160d9e66c5d4e3ee179c6f0e7ff055"
250
+ },
251
+ "src/fastplms/models/boltz/vb_potentials_potentials.py": {
252
+ "size": 36675,
253
+ "sha256": "62f654f99407f87f24b1753354478f72b0833d5c302323234e800b0d35b48cc9"
254
+ },
255
+ "src/fastplms/models/boltz/vb_potentials_schedules.py": {
256
+ "size": 2391,
257
+ "sha256": "41c4e59b4af49532dd81e7275413eb31582257ce4af85e33c364394644fbc4ad"
258
+ },
259
+ "src/fastplms/models/boltz/vb_tri_attn_attention.py": {
260
+ "size": 4719,
261
+ "sha256": "96cf947c9d47ccabf104a8dc558cf1b3d94f946ee2b9bc4f90e0fea7e1c131bc"
262
+ },
263
+ "src/fastplms/models/boltz/vb_tri_attn_primitives.py": {
264
+ "size": 9812,
265
+ "sha256": "746538afff040a5de4dd1f93e35a3547e1d08692056dac137de858e4e58baecd"
266
+ },
267
+ "src/fastplms/models/boltz/vb_tri_attn_utils.py": {
268
+ "size": 11300,
269
+ "sha256": "c5fb4adf3110de5699a7c1f639003413b3f8f4a106bd7ae4a3f89486be75b35e"
270
+ },
271
+ "src/fastplms/models/classification_probe.py": {
272
+ "size": 20365,
273
+ "sha256": "5efe95feab4674174ac88d30f9e0659d6c0f8035851b5bc351f3738d479e93a9"
274
+ },
275
+ "src/fastplms/models/dplm/__init__.py": {
276
+ "size": 0,
277
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
278
+ },
279
+ "src/fastplms/models/dplm/modeling_dplm.py": {
280
+ "size": 55368,
281
+ "sha256": "9b7f1ffebf82aa23d7ad763ca910fa897c27b6b5401b9f04f925bde65a3d70a5"
282
+ },
283
+ "src/fastplms/models/dplm2/__init__.py": {
284
+ "size": 127,
285
+ "sha256": "cda00bad9b68061cd2b480863507bb33d9b307f96ae9c454ce26fed746e33776"
286
+ },
287
+ "src/fastplms/models/dplm2/modeling_dplm2.py": {
288
+ "size": 58263,
289
+ "sha256": "6d037e4170452dfe0fffa69659b09175c3a2b032c03e05647e2a5fba37f0daa2"
290
+ },
291
+ "src/fastplms/models/dplm2/tokenization_dplm2.py": {
292
+ "size": 3761,
293
+ "sha256": "b527a626251adc4496d2046a048ea89f5f9326efcbc74114d766fd5b0736cdf2"
294
+ },
295
+ "src/fastplms/models/e1/__init__.py": {
296
+ "size": 0,
297
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
298
+ },
299
+ "src/fastplms/models/e1/attention.py": {
300
+ "size": 17944,
301
+ "sha256": "0800c4279b9beb8f9692eb030f375045448fd9d0afc5acfcb08f6e3f5b734d12"
302
+ },
303
+ "src/fastplms/models/e1/cache.py": {
304
+ "size": 9913,
305
+ "sha256": "bbe4a04036d0dc04b1b8d7fc40f67c19862d9e43180988aba26a2c20c9c9adc6"
306
+ },
307
+ "src/fastplms/models/e1/modeling_e1.py": {
308
+ "size": 98837,
309
+ "sha256": "60373e76e01de527a15c17e7377b4f78b77bf6519f2845ab32e3060c6b39d099"
310
+ },
311
+ "src/fastplms/models/e1/preparation.py": {
312
+ "size": 10628,
313
+ "sha256": "aad61cdd8bbbec9f410f7d4c2b327a0dddc9e612e2e007d359f883f693ed2a24"
314
+ },
315
+ "src/fastplms/models/e1/retrieval.py": {
316
+ "size": 71281,
317
+ "sha256": "7702c46763ff242d423a890edde33867e2273e82dc0bde43f6d92debce9d5f08"
318
+ },
319
+ "src/fastplms/models/esm2/__init__.py": {
320
+ "size": 0,
321
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
322
+ },
323
+ "src/fastplms/models/esm2/modeling_fastesm.py": {
324
+ "size": 45755,
325
+ "sha256": "e40442e9c2479b052b79a0912f375ca22c56ad5aa0dd75137e9bfabec9b1cefc"
326
+ },
327
+ "src/fastplms/models/esm3/__init__.py": {
328
+ "size": 303,
329
+ "sha256": "a2a678dc996ce8238c456cb667a5d63a342e28df72553546c6a8f5893f8f2545"
330
+ },
331
+ "src/fastplms/models/esm3/modeling_esm3.py": {
332
+ "size": 114023,
333
+ "sha256": "590cbf9a34ca439913c0b7d8221e8aef35bfaf98d7de533cc22df76d7d141995"
334
+ },
335
+ "src/fastplms/models/esm_plusplus/__init__.py": {
336
+ "size": 0,
337
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
338
+ },
339
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus.py": {
340
+ "size": 82069,
341
+ "sha256": "892ab6c3e69982713980ed83ecfb697c1842731b6415c9d0d448a1529942b0d2"
342
+ },
343
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus_sae.py": {
344
+ "size": 9994,
345
+ "sha256": "a8bc37695c29f0a91597bc8c95ff0516615944ac7ee35d18e56c23ebcd52ab5d"
346
+ },
347
+ "src/fastplms/models/esmfold/__init__.py": {
348
+ "size": 0,
349
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
350
+ },
351
+ "src/fastplms/models/esmfold/modeling_fast_esmfold.py": {
352
+ "size": 45830,
353
+ "sha256": "142b2aeb311bd8bfb6a0fa3a911d0ea9aefac27692afdfb34549fce0ac8b37fc"
354
+ },
355
+ "src/fastplms/models/esmfold2/__init__.py": {
356
+ "size": 2030,
357
+ "sha256": "167872850136ffb473f639dddc2323099bc534efe10fdad9fe2a799e444c7a18"
358
+ },
359
+ "src/fastplms/models/esmfold2/attention.py": {
360
+ "size": 1650,
361
+ "sha256": "3112740d2d5a27f8879b274159fae930f6949e80cf015c3f8d8405769e2ab5d7"
362
+ },
363
+ "src/fastplms/models/esmfold2/confidence_checkpoint.py": {
364
+ "size": 6754,
365
+ "sha256": "517534eab41d3496ce6b9c015b28dbb1105cab0776f92c9e2bb4355038ca772d"
366
+ },
367
+ "src/fastplms/models/esmfold2/configuration_esmfold2.py": {
368
+ "size": 14860,
369
+ "sha256": "d9687fd2031c7f2c003430df710377651dfb163d1a559b64a8c9dc8a11c0eaaf"
370
+ },
371
+ "src/fastplms/models/esmfold2/embedding.py": {
372
+ "size": 4409,
373
+ "sha256": "43c045ebf0502ce801d0f0abf04c7b53b85ba27e8c3eceb546a3c0b1c0581aa3"
374
+ },
375
+ "src/fastplms/models/esmfold2/esmfold2_affine3d.py": {
376
+ "size": 24771,
377
+ "sha256": "7e5a109942e4e8c4f2a83281d2d8b83a04c7cefb7931b27eca6c146af47f2d85"
378
+ },
379
+ "src/fastplms/models/esmfold2/esmfold2_aligner.py": {
380
+ "size": 3050,
381
+ "sha256": "0ac5f9bbfcb98dfa2967070f5f3c6e63b0d5f8dec08afe50ec0c6c14520e2798"
382
+ },
383
+ "src/fastplms/models/esmfold2/esmfold2_atom_indexer.py": {
384
+ "size": 928,
385
+ "sha256": "388d11d06e45062aba55934c0bc32925998ed5d85525bec00bafd9d67b98dc6a"
386
+ },
387
+ "src/fastplms/models/esmfold2/esmfold2_conformers.py": {
388
+ "size": 16121,
389
+ "sha256": "d5be3080a08f672a1f7d6a5d523cf1fe7d7559e7324faa5c735ccd78b4ddad35"
390
+ },
391
+ "src/fastplms/models/esmfold2/esmfold2_constants.py": {
392
+ "size": 6060,
393
+ "sha256": "65f978329690b46c4a3cc9f4815fe439b1e355be03ef2a9134b83ab889958751"
394
+ },
395
+ "src/fastplms/models/esmfold2/esmfold2_constants_esm3.py": {
396
+ "size": 2913,
397
+ "sha256": "6f9c8bbf0f80b6cd9ede136d142b51ff2b84f1b339cb6b6668c2669e8c2584b5"
398
+ },
399
+ "src/fastplms/models/esmfold2/esmfold2_input_builder.py": {
400
+ "size": 6860,
401
+ "sha256": "3fccb115fa79ac88e5e2bb09a2b7273fbc1ae5ca540947eb27d1e827c46baa7b"
402
+ },
403
+ "src/fastplms/models/esmfold2/esmfold2_metrics.py": {
404
+ "size": 10448,
405
+ "sha256": "a3674d794414181b94e5d42c80941c28740893cbc8f3f65a0eabcfd1f18ac7d1"
406
+ },
407
+ "src/fastplms/models/esmfold2/esmfold2_misc.py": {
408
+ "size": 16193,
409
+ "sha256": "e79990024d597bdaaa093a90a342029a1cb044618d4935d7d1d12584fb560541"
410
+ },
411
+ "src/fastplms/models/esmfold2/esmfold2_mmcif_parsing.py": {
412
+ "size": 16610,
413
+ "sha256": "8ed0fe1afdc15f148509f92f850707b5cb8e9eff019b46552ac7a83c04f3c9b4"
414
+ },
415
+ "src/fastplms/models/esmfold2/esmfold2_molecular_complex.py": {
416
+ "size": 40861,
417
+ "sha256": "fbb5a616fd0a4335c21ea814cdec9c184815effd21521ff980e93ce0b1a86a1e"
418
+ },
419
+ "src/fastplms/models/esmfold2/esmfold2_msa.py": {
420
+ "size": 20888,
421
+ "sha256": "55aaf57d3e0e983971102ae9582aece9e6fd4cc339aed672b61be999ff945087"
422
+ },
423
+ "src/fastplms/models/esmfold2/esmfold2_msa_filter_sequences.py": {
424
+ "size": 4012,
425
+ "sha256": "964f888b71a41974f2ee172a93631c8f3c32f643e67d346ac04d5a27a29e58e5"
426
+ },
427
+ "src/fastplms/models/esmfold2/esmfold2_normalize_coordinates.py": {
428
+ "size": 3030,
429
+ "sha256": "3b3c9854d58f7e498e7b1b6ec2ffed139233f54bb3abcb9b64edc82d1f8aefdc"
430
+ },
431
+ "src/fastplms/models/esmfold2/esmfold2_output.py": {
432
+ "size": 7860,
433
+ "sha256": "eb2dba85fd9368b76d2c5e7c426cc51f4fc67ec9b16e6463dc3eee126db0d0cd"
434
+ },
435
+ "src/fastplms/models/esmfold2/esmfold2_paired_msa.py": {
436
+ "size": 9426,
437
+ "sha256": "7c5147677d05c8c11023c71c7ee95ddc3cd629e95fbe6bb59a1df4cf56b8174e"
438
+ },
439
+ "src/fastplms/models/esmfold2/esmfold2_parsing.py": {
440
+ "size": 3896,
441
+ "sha256": "9404c5d8514281712681c4bb2fbe694420e0b6612a361d1f0186d294e1f1fb5d"
442
+ },
443
+ "src/fastplms/models/esmfold2/esmfold2_predicted_aligned_error.py": {
444
+ "size": 4889,
445
+ "sha256": "eae9a59a5da8d7e54b319619162c235c880666d475ff495cd14d015c0bfa22b1"
446
+ },
447
+ "src/fastplms/models/esmfold2/esmfold2_prepare_input.py": {
448
+ "size": 40736,
449
+ "sha256": "b75323afe401531eb17d4c23454fa024448e0563f8f94ad7adc3f91522a7a27a"
450
+ },
451
+ "src/fastplms/models/esmfold2/esmfold2_processor.py": {
452
+ "size": 13210,
453
+ "sha256": "de878f5a2165951535dd177de9eb8322f35308c612bba6f0363fb825c3d8e1a1"
454
+ },
455
+ "src/fastplms/models/esmfold2/esmfold2_protein_chain.py": {
456
+ "size": 63543,
457
+ "sha256": "601b522c1c4d518e3751edede644e351ce9fff60229ca8029d2f69559f4a5812"
458
+ },
459
+ "src/fastplms/models/esmfold2/esmfold2_protein_complex.py": {
460
+ "size": 52765,
461
+ "sha256": "cb68d3ad8491390961e95dcb7f0726a6d249666f95fc046f233c3d56aa0a9bd5"
462
+ },
463
+ "src/fastplms/models/esmfold2/esmfold2_protein_structure.py": {
464
+ "size": 9884,
465
+ "sha256": "dddf87923bca888605cf84c89c11a24dcf6f500ec99bf6ad545faa5f9ca04998"
466
+ },
467
+ "src/fastplms/models/esmfold2/esmfold2_residue_constants.py": {
468
+ "size": 32920,
469
+ "sha256": "9c2fe8f454300d7a676fc7160003232dd9ff926e2b48289853c2636ac9ba2d4b"
470
+ },
471
+ "src/fastplms/models/esmfold2/esmfold2_sequential_dataclass.py": {
472
+ "size": 3929,
473
+ "sha256": "453657d127b6a78371f760fcf0cedfeaef8bb5024eeb7a1ffa66742323c279cf"
474
+ },
475
+ "src/fastplms/models/esmfold2/esmfold2_system.py": {
476
+ "size": 1602,
477
+ "sha256": "5916250a3fa873983f06af668823c940813802a3db576bccf4e3343103564b7f"
478
+ },
479
+ "src/fastplms/models/esmfold2/esmfold2_types.py": {
480
+ "size": 876,
481
+ "sha256": "2ab7e6fe0e228f6c579ed4aa96a097f9904bd3c11253434994be7b04952f35bb"
482
+ },
483
+ "src/fastplms/models/esmfold2/esmfold2_utils_types.py": {
484
+ "size": 1060,
485
+ "sha256": "d00f3cd100b0151859831cd187d7fdb49d3aeda631544205d2ca63bb7d710879"
486
+ },
487
+ "src/fastplms/models/esmfold2/modeling_esmfold2.py": {
488
+ "size": 87462,
489
+ "sha256": "3bbdbe7c502a1b61926e0b3b2aee148deabaa97537dbc58622e8e10cca76b9a7"
490
+ },
491
+ "src/fastplms/models/esmfold2/modeling_esmfold2_classification.py": {
492
+ "size": 9423,
493
+ "sha256": "5f46ab5bac2359bf541551967b2652545892467456042023819a7f5cb9036388"
494
+ },
495
+ "src/fastplms/models/esmfold2/modeling_esmfold2_common.py": {
496
+ "size": 125129,
497
+ "sha256": "ec43392fce2a5d4b4bf258c4239a7d690b79d2197fb1f21ceb1059e78951ba44"
498
+ },
499
+ "src/fastplms/models/esmfold2/modeling_esmfold2_experimental.py": {
500
+ "size": 50224,
501
+ "sha256": "e11c52cceb0ba4f1cf5eca17eda00e8c2e0498686377371a88111d4061093bb3"
502
+ },
503
+ "src/fastplms/models/esmfold2/protein_utils.py": {
504
+ "size": 8093,
505
+ "sha256": "b7f40b19dc2c20e144b8fe3ccd0dbb2ec846526d015d6c8c922802d741be1f46"
506
+ },
507
+ "src/fastplms/models/esmfold2/reproducibility.py": {
508
+ "size": 1743,
509
+ "sha256": "18f13e266c9db67093fe756ca07bb93bb136a8e7b783a12d46bab82d0c69778d"
510
+ },
511
+ "src/fastplms/models/ttt.py": {
512
+ "size": 37758,
513
+ "sha256": "bbcd0d46cb2e1815f86cdb3d710fb89b2539a18d8ff03ce9306e88ca72d70309"
514
+ },
515
+ "src/fastplms/registry.py": {
516
+ "size": 68948,
517
+ "sha256": "c370419b34fc86a32c757b26601847be413a6b24384d435934d0431b99823d92"
518
+ },
519
+ "src/fastplms/runtime.py": {
520
+ "size": 2541,
521
+ "sha256": "9521c37fcd168bf9a4137277fb73672403ccf30d70d4845aa879fb22f42ddeb6"
522
+ },
523
+ "tools/confidence/__init__.py": {
524
+ "size": 58,
525
+ "sha256": "906ebf189faecc0e4db0667e06235ddedb5f55ccb8764007cefb94bebab4d1e2"
526
+ },
527
+ "tools/confidence/acceptance.py": {
528
+ "size": 11760,
529
+ "sha256": "8039c46a56731d560a50d6ea256f4b3241cd899049b40aaa23d01e5aa73246c6"
530
+ },
531
+ "tools/confidence/artifact_validation.py": {
532
+ "size": 4870,
533
+ "sha256": "39a762846cce12596318a84db9858ba4699763639a0c2d78a9e0a1c912b310ba"
534
+ },
535
+ "tools/confidence/budget.py": {
536
+ "size": 534,
537
+ "sha256": "5ff3392d24db6569c8104ac614f3318a1cdba57c09cc9b3207ebd7e936f974d2"
538
+ },
539
+ "tools/confidence/cache.py": {
540
+ "size": 24237,
541
+ "sha256": "0fb7cc37ffc340fd16c61f44cba3f7462593638aef3937f12fe8c4ff791001cf"
542
+ },
543
+ "tools/confidence/call_status.py": {
544
+ "size": 703,
545
+ "sha256": "8a1063424e355915c4d254a92df1b6e1dc8258a454316ee21bd4b0a5647e507a"
546
+ },
547
+ "tools/confidence/campaign.py": {
548
+ "size": 6460,
549
+ "sha256": "a4e91bfa6da4db22526a2ea21a671117d033c014158410c4678fa21593d8a821"
550
+ },
551
+ "tools/confidence/config.py": {
552
+ "size": 1708,
553
+ "sha256": "342e6fdf9cd8a7cd7f3f455e519b3ebd63132001b1c95e8ad4b8c5cf05077d9f"
554
+ },
555
+ "tools/confidence/data.py": {
556
+ "size": 33870,
557
+ "sha256": "acdbad582e458d05946b6403e2f42db59fe48a5b970dd01123be2951aea2bdaa"
558
+ },
559
+ "tools/confidence/evaluation.py": {
560
+ "size": 15661,
561
+ "sha256": "ef00a4ce9a27f2561689496e114cbc6d160bc186e6c1214cbb7ff1be23733992"
562
+ },
563
+ "tools/confidence/experiment_artifacts.py": {
564
+ "size": 22122,
565
+ "sha256": "91af0497832eca1ba75c1485406e1e7bae4f6552123aff70b2f9c4be9304edff"
566
+ },
567
+ "tools/confidence/gpu_benchmark.py": {
568
+ "size": 5686,
569
+ "sha256": "cb95a65622fd21bb4f31a981e914ff1f2c38a956f5c1e564c3038c7db25bed82"
570
+ },
571
+ "tools/confidence/host.py": {
572
+ "size": 24692,
573
+ "sha256": "846960995b4f93a1f1e7215214789a61a70cdc1d8daa3f5f6c8cc628f20c6929"
574
+ },
575
+ "tools/confidence/labels.py": {
576
+ "size": 11283,
577
+ "sha256": "6eb50c11860f6b379f257586b7918dcfe4ef60b1fb84268c1909ea95bafcf7dd"
578
+ },
579
+ "tools/confidence/launch.py": {
580
+ "size": 9672,
581
+ "sha256": "472445e07620269e367350ab897f33ca174d1e03cafbcc026c8e4496a9d0ebcc"
582
+ },
583
+ "tools/confidence/launch_v2.py": {
584
+ "size": 1197,
585
+ "sha256": "458d229e06b9b378312e75ecf027a4f053908a9b59c60638a04092bb8f8dd52a"
586
+ },
587
+ "tools/confidence/live_binding.py": {
588
+ "size": 5275,
589
+ "sha256": "5d3222fa93d99828e7cdfe2d881989df48c4fe6308f1ec33058e215a5853e13f"
590
+ },
591
+ "tools/confidence/live_checkpoints.py": {
592
+ "size": 12365,
593
+ "sha256": "2338b1362cb7a31f5c54ec60e9a67c253d4dbcc0ad14bc6a405224e4ead92528"
594
+ },
595
+ "tools/confidence/metrics.py": {
596
+ "size": 15585,
597
+ "sha256": "cb9fca1f26616bc8ac0330976f8d52cede3b5ef61769221821e4de202e93b36a"
598
+ },
599
+ "tools/confidence/migration.py": {
600
+ "size": 9152,
601
+ "sha256": "ce4d841e236c0e984fa06edb25d22fbf3c782b9d779b98127032da7425e85982"
602
+ },
603
+ "tools/confidence/modal_app.py": {
604
+ "size": 11798,
605
+ "sha256": "d83c49d99ca8aeacaf9d908f63b574d171bc11de43181de808d80b0ac39f1d4b"
606
+ },
607
+ "tools/confidence/modal_gpu_benchmark.py": {
608
+ "size": 3916,
609
+ "sha256": "a359c911c70d10c82c41e186ec53f1ae66063fb7cc74a5beaf09b97b6f525c0b"
610
+ },
611
+ "tools/confidence/modal_live.py": {
612
+ "size": 7140,
613
+ "sha256": "d7ced062558e73dabf9bc1f1bdf7f7bb0c417693964790be076e3634151bebdf"
614
+ },
615
+ "tools/confidence/modal_resume.py": {
616
+ "size": 4021,
617
+ "sha256": "3a0f6615180d1040e146a5d1e1702ee1bb3446cb65cb86e00113e3a80de97eaa"
618
+ },
619
+ "tools/confidence/modal_v2.py": {
620
+ "size": 11816,
621
+ "sha256": "a396b160244926fd7af57d0dceee6cff3d301fca1b3fa83b4d08d83569f76964"
622
+ },
623
+ "tools/confidence/online_smoke.py": {
624
+ "size": 17889,
625
+ "sha256": "a95b72b4ba244a9289dbcfecfc3201d4c033b3e41c2d6fe18a3b0ffd5a9b8f0a"
626
+ },
627
+ "tools/confidence/online_training.py": {
628
+ "size": 32956,
629
+ "sha256": "9326012b780bd739841f930c7fb08431e1b615b334581376a006c9b7fa9d44a4"
630
+ },
631
+ "tools/confidence/packaging.py": {
632
+ "size": 8909,
633
+ "sha256": "efd50d289d0a35e6634428ad37ed0812c5a00607924fb3159796b95e5a70a9bb"
634
+ },
635
+ "tools/confidence/ranking.py": {
636
+ "size": 3677,
637
+ "sha256": "32db0f3f46d8dc7770ad8a280169ed8fb2888024dd0d66964c3d7f0ab97de578"
638
+ },
639
+ "tools/confidence/recompute.py": {
640
+ "size": 10462,
641
+ "sha256": "e19c11e77632e70ca0d4dd9eb66dff0a0e04e4a5bb4db36148e6532edc10e225"
642
+ },
643
+ "tools/confidence/release.py": {
644
+ "size": 8949,
645
+ "sha256": "3ea71eac204b6c8f3c8783894544a06cd8101b0d23c1c3e5e4b4735fcce25201"
646
+ },
647
+ "tools/confidence/rollouts.py": {
648
+ "size": 21348,
649
+ "sha256": "1dad3e3e0dca8d8aa56070efd7b23dd4ffefd4109aab33c2f05843e87f940f1d"
650
+ },
651
+ "tools/confidence/selection.py": {
652
+ "size": 1003,
653
+ "sha256": "dd0e9c87dd48f63159b997e801bb0595f1ebf5c9eaed1f5b2bab1a3543054cf1"
654
+ },
655
+ "tools/confidence/splits.py": {
656
+ "size": 5417,
657
+ "sha256": "3ea939c6b6621c3e6e3eea14a1a08c682936fbebcb4c84a31ede7318f30fdbf4"
658
+ },
659
+ "tools/confidence/ssh.py": {
660
+ "size": 7530,
661
+ "sha256": "e80d0904563e71c343742e31093ba812c173039ac255317caf471c1c069cf538"
662
+ },
663
+ "tools/confidence/structure_metrics.py": {
664
+ "size": 13711,
665
+ "sha256": "a0b8825b367d0112b5a5e8acd06e66441067b049bfe1932df9390ec92c26d71b"
666
+ },
667
+ "tools/confidence/target_pool.py": {
668
+ "size": 11433,
669
+ "sha256": "fee32a81939c31276fce9a6e2dedd68ade5b135eb3a3e345f02ec6f4d523377c"
670
+ },
671
+ "tools/confidence/target_splits.py": {
672
+ "size": 8602,
673
+ "sha256": "15dcec9e83cda07562231bcc13212d7bce47303c8e7c94d9297e2a814bd62946"
674
+ },
675
+ "tools/confidence/test_evaluation.py": {
676
+ "size": 16800,
677
+ "sha256": "6a9998a1e11d325c16b21ef47d3abdc89f2ec7a8a1d212994577191ef10fceca"
678
+ },
679
+ "tools/confidence/training.py": {
680
+ "size": 37010,
681
+ "sha256": "e87056dfcf26cd98b4c42b191154f8bafe63622d3574db2220d0cc1c32399069"
682
+ },
683
+ "tools/confidence/v2_analysis.py": {
684
+ "size": 9958,
685
+ "sha256": "d6c41100acacfad1922ad43aa9b453ffcead3c36876230b80ebe0ddbffa4121e"
686
+ },
687
+ "tools/confidence/v2_campaign.py": {
688
+ "size": 9807,
689
+ "sha256": "347c9619c3427c74afcc4c58c6f8b6513d32abdefe02aa1dff3c3aca4a831f4f"
690
+ },
691
+ "tools/confidence/v2_records.py": {
692
+ "size": 2110,
693
+ "sha256": "57a5be646cc29637b36732bf3927115a8f879cf0d91d82b26d5b850628ae86da"
694
+ },
695
+ "tools/confidence/workflow.py": {
696
+ "size": 12886,
697
+ "sha256": "abe8624dd5b980dcac43864e19649a4058bfed8fb8207d9014b0f50decadb1db"
698
+ },
699
+ "tools/execution/__init__.py": {
700
+ "size": 77,
701
+ "sha256": "1aa67ededb225e478f19423c2e70deacfd00a4734d6116c8ccc6eafb4a6fd4f8"
702
+ },
703
+ "tools/execution/budget.py": {
704
+ "size": 5146,
705
+ "sha256": "7bde890c6dad647d23208460085f92b93d6f9e497a85b5cb0b6e1a5c33514534"
706
+ },
707
+ "tools/execution/pricing.py": {
708
+ "size": 611,
709
+ "sha256": "a1758c1a0df12cb08612c40167a9df87975abb2c170d227ccf775009dbfb3d80"
710
+ },
711
+ "tools/execution/source.py": {
712
+ "size": 6786,
713
+ "sha256": "2dd3694f5975f571db741084ac1d56b6dd693818ef323f013dae21e8bbde7339"
714
+ }
715
+ }
716
+ },
717
+ "environment": {
718
+ "python": "3.12.10",
719
+ "platform": "Linux-4.19.0-gvisor-x86_64-with-glibc2.36",
720
+ "packages": {
721
+ "torch": "2.13.0+cu132",
722
+ "transformers": "5.13.0",
723
+ "numpy": "1.26.4",
724
+ "scipy": "1.16.3",
725
+ "safetensors": "0.8.0",
726
+ "DockQ": "2.1.3",
727
+ "tmtools": "0.2.0"
728
+ }
729
+ },
730
+ "public_inputs": {
731
+ "inputs/split-report.json": {
732
+ "size": 1630,
733
+ "sha256": "1b004da92bc8ae7867f9a8b20ef39246b70f7b5e660a27aa0b5dd21567d07174"
734
+ },
735
+ "inputs/training-report.json": {
736
+ "size": 29445,
737
+ "sha256": "40cc7e9c82b9ffa67e057b76d0c6beabe1a0af504d41b6b563834fa9597b5773"
738
+ },
739
+ "targets.json": {
740
+ "size": 695798,
741
+ "sha256": "f97c983e51416f73bdc5607b20f6358f1fd70ba59a3379a44119255fbbb88aee"
742
+ }
743
+ },
744
+ "private_inputs": {
745
+ "checkpoints/v2.safetensors": {
746
+ "size": 31082180,
747
+ "sha256": "40fd7f3d82fcefe8ad20ab2b32a37a68a84b54a527a4bce6eb9437bad2b77e31"
748
+ },
749
+ "checkpoints/pilot.safetensors": {
750
+ "size": 31082180,
751
+ "sha256": "4dfc691e529617fc7cc0cd1ee60799ce1b496fdd0d17f0b4bb78b33a96c77733"
752
+ }
753
+ }
754
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/resume-history/attempt-2aa4d052d4a8412f919c08fb0ade6748.json ADDED
@@ -0,0 +1,669 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "started_unix": 1790175383.4921043,
3
+ "remaining_seconds": 10313.139565229416,
4
+ "retained_targets": 158,
5
+ "source_files": {
6
+ "src/fastplms/models.toml": {
7
+ "size": 83488,
8
+ "sha256": "0967a7805cd5ba107825a7dc473008d49c0334bd18714e1dfa9e51d0c42ee6f1"
9
+ },
10
+ "src/fastplms/__init__.py": {
11
+ "size": 1857,
12
+ "sha256": "8503e02debf24abc6d33c1913ff3eb9f245e63f7e62017e220d072c7393fdf2c"
13
+ },
14
+ "src/fastplms/attention/__init__.py": {
15
+ "size": 2259,
16
+ "sha256": "ae5c77f7293ae4a411fe1e57ac1e0ba69d47c077de8e46f6561f9af58ba2b5e2"
17
+ },
18
+ "src/fastplms/attention/_auto.py": {
19
+ "size": 7050,
20
+ "sha256": "d7adc2c3d9bb1a5b301e1a379ce28983f134ddbac9b44a3cf5bbf322cd7139a5"
21
+ },
22
+ "src/fastplms/attention/_core.py": {
23
+ "size": 35863,
24
+ "sha256": "3f3a09c590f566cb77d9586fd8ccff48496a67be0ace20e3db90165b54ffa07e"
25
+ },
26
+ "src/fastplms/attention/_kernel_lock.py": {
27
+ "size": 7063,
28
+ "sha256": "17adb859c994676b81df142e61d26ee5a723080c2a4fabc78c650b57300d51f8"
29
+ },
30
+ "src/fastplms/attention/interfaces.py": {
31
+ "size": 16976,
32
+ "sha256": "3b538e4b109f57b2a3a74cb1f0f7cbe8b43b6b6479f7161475cc1ec9bb260a08"
33
+ },
34
+ "src/fastplms/embeddings/__init__.py": {
35
+ "size": 1505,
36
+ "sha256": "cf0648de905a00ad16c0aece328eeb05f25739a4cf89b47b915e0f2b19c3ce26"
37
+ },
38
+ "src/fastplms/embeddings/batches.py": {
39
+ "size": 16175,
40
+ "sha256": "569693978dafddf585e45789b6ea9b45246c604def422f3c13dae54396503a25"
41
+ },
42
+ "src/fastplms/embeddings/identity.py": {
43
+ "size": 21198,
44
+ "sha256": "9508d14d2a997250e388dd94d2357eee28792e5da67509e917179160e627720d"
45
+ },
46
+ "src/fastplms/embeddings/inputs.py": {
47
+ "size": 9833,
48
+ "sha256": "b9c3f3eb228a6b21948afc141bd148d4d976cd4c142a9f180f36c33d6ff99599"
49
+ },
50
+ "src/fastplms/embeddings/output.py": {
51
+ "size": 9082,
52
+ "sha256": "1b86275772880de0f4ee51d7a125a877dab086cf56a4ec257dce7b9805cc8289"
53
+ },
54
+ "src/fastplms/embeddings/pooling.py": {
55
+ "size": 9876,
56
+ "sha256": "a393e78523e1fcb7362755619a580ea443814a410a995d90bd2d90f5b1d57bd9"
57
+ },
58
+ "src/fastplms/embeddings/runner.py": {
59
+ "size": 18432,
60
+ "sha256": "26371501163a88957701d9c4f4f6dbdc017c4b9ca3fb88cadc1b164c9334d565"
61
+ },
62
+ "src/fastplms/embeddings/storage.py": {
63
+ "size": 66427,
64
+ "sha256": "2091a59482370ed8830aa12cd8fde3d61e23a78368ee8267a89f8b7feb83cad3"
65
+ },
66
+ "src/fastplms/embeddings/types.py": {
67
+ "size": 6463,
68
+ "sha256": "c58f8c6a37a11a937c3f77b4e1617d5f213923d98ecaffddcdd283bd9dc42fe7"
69
+ },
70
+ "src/fastplms/models/__init__.py": {
71
+ "size": 336,
72
+ "sha256": "d3dd084f5e8fafcf2d0fe4a26e4ab9284d3f9414b1f9a5bd86e308a406447c43"
73
+ },
74
+ "src/fastplms/models/_diffusion_generation.py": {
75
+ "size": 20233,
76
+ "sha256": "1cadcca445ee9faa97f54cc1e47c30bb106d77344a7a91779b73f7517180b370"
77
+ },
78
+ "src/fastplms/models/_esm_rotary.py": {
79
+ "size": 4445,
80
+ "sha256": "b9b107633e9eb434b93a4f4cc0393bb8454d1a4ad67722038d177dffddd802b5"
81
+ },
82
+ "src/fastplms/models/ankh/__init__.py": {
83
+ "size": 0,
84
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
85
+ },
86
+ "src/fastplms/models/ankh/modeling_ankh.py": {
87
+ "size": 65086,
88
+ "sha256": "25f67d1e62da5bf3f2f9b1ce7bf032b6e0c4c3327f30eae05dd76037f9a08634"
89
+ },
90
+ "src/fastplms/models/boltz/__init__.py": {
91
+ "size": 347,
92
+ "sha256": "776dd9df11291750ddc4389f5f58fdd52c7e596db4b95c28129cb639f3903c43"
93
+ },
94
+ "src/fastplms/models/boltz/_pair_attention.py": {
95
+ "size": 1816,
96
+ "sha256": "736c4553adc2b871b04db325fbd2d8ee6f1c18bbb4ffacb440a5c2d76304169b"
97
+ },
98
+ "src/fastplms/models/boltz/cif_writer.py": {
99
+ "size": 5779,
100
+ "sha256": "6a6124240c4c9ffdc6de67df731c1eb05aed5dbaae60dd0192ab3b31c9556d42"
101
+ },
102
+ "src/fastplms/models/boltz/minimal_featurizer.py": {
103
+ "size": 38227,
104
+ "sha256": "c896a132c505e13d35aa51dd68eb78c37e873010d5c402f0ab78cf43bf9dd3cf"
105
+ },
106
+ "src/fastplms/models/boltz/minimal_structures.py": {
107
+ "size": 514,
108
+ "sha256": "41715893ae68fd75a6b47e7ef99c4db50eb460223d09717e5f6c074f39c59a68"
109
+ },
110
+ "src/fastplms/models/boltz/modeling_boltz2.py": {
111
+ "size": 46081,
112
+ "sha256": "6ff78cfcbe10cfdb2fdd2da15ed9f6a7e37f1bc6ed66b2e168506e14ccbb36f9"
113
+ },
114
+ "src/fastplms/models/boltz/vb_const.py": {
115
+ "size": 7587,
116
+ "sha256": "4b31e76f49710b19ce8ce9bb4cb2906bee79c000d1f0960e2440fd25ad9f967d"
117
+ },
118
+ "src/fastplms/models/boltz/vb_layers_attention.py": {
119
+ "size": 3797,
120
+ "sha256": "71918a961e16c2133b69274eea77e73d11325a79d2e117da452163606e0982c0"
121
+ },
122
+ "src/fastplms/models/boltz/vb_layers_attentionv2.py": {
123
+ "size": 2776,
124
+ "sha256": "50297a67887a95ba74bf583b7fb90c3e74d391118f484a39d8f419d6c0d43bb5"
125
+ },
126
+ "src/fastplms/models/boltz/vb_layers_confidence_utils.py": {
127
+ "size": 10427,
128
+ "sha256": "77099208f4bbd18b895ac1ef854ba1ee22762f64024037f95712c6f6b537b8fb"
129
+ },
130
+ "src/fastplms/models/boltz/vb_layers_dropout.py": {
131
+ "size": 1505,
132
+ "sha256": "311c1c9770c23df5148c066e8c8a054d6a32830c9800d46ba9f17e74670fb8cd"
133
+ },
134
+ "src/fastplms/models/boltz/vb_layers_initialize.py": {
135
+ "size": 3152,
136
+ "sha256": "c0e52df5833c3459761a4d042d7d3afff7e336cf4e8d3e66a59c6358c268e2c0"
137
+ },
138
+ "src/fastplms/models/boltz/vb_layers_outer_product_mean.py": {
139
+ "size": 4267,
140
+ "sha256": "107d37a5572322e45bb279f164dada9e9fbc8542a245ce65342727aed2bc7390"
141
+ },
142
+ "src/fastplms/models/boltz/vb_layers_pair_averaging.py": {
143
+ "size": 4487,
144
+ "sha256": "cbec19c03dada6185bd053d50b01fcbf7958a839449dda24d465d98412199806"
145
+ },
146
+ "src/fastplms/models/boltz/vb_layers_pairformer.py": {
147
+ "size": 11493,
148
+ "sha256": "8de7846d1ff203e88368ce9dd26bdb91c6150991994413b5ca173714e425ec56"
149
+ },
150
+ "src/fastplms/models/boltz/vb_layers_transition.py": {
151
+ "size": 3093,
152
+ "sha256": "0a1ce258ce88f1571937b4141fb94e39e700cb6e2538400c9468bc0db6ac6ad4"
153
+ },
154
+ "src/fastplms/models/boltz/vb_layers_triangular_mult.py": {
155
+ "size": 4753,
156
+ "sha256": "fc37d98cd6b0be23e497dce53a05332460f2fa37f782f9a948e25abc254942c7"
157
+ },
158
+ "src/fastplms/models/boltz/vb_loss_diffusionv2.py": {
159
+ "size": 6506,
160
+ "sha256": "8a596179bf54f47334bb7da5fb3383581b7a2c3db28879d7c42019a31f5395cd"
161
+ },
162
+ "src/fastplms/models/boltz/vb_modules_confidencev2.py": {
163
+ "size": 25062,
164
+ "sha256": "cfa10e8f10405b230bd764f702c0d39f17ab7b42386df0e59adc681467d1f365"
165
+ },
166
+ "src/fastplms/models/boltz/vb_modules_diffusion_conditioning.py": {
167
+ "size": 4873,
168
+ "sha256": "ab4a9e5a7ccbdac62ff3cc4e04b65188bd442d2ede036ca7971fbefded95990f"
169
+ },
170
+ "src/fastplms/models/boltz/vb_modules_diffusionv2.py": {
171
+ "size": 30705,
172
+ "sha256": "717e6475df080f5941804cfbdfb6a193d5ecd788ea9a01e0dbb073c65460663d"
173
+ },
174
+ "src/fastplms/models/boltz/vb_modules_encodersv2.py": {
175
+ "size": 25374,
176
+ "sha256": "97f0db310f5bbc07da9eee7cb1e6c1bcbe24bc6154add0de932a88b094928193"
177
+ },
178
+ "src/fastplms/models/boltz/vb_modules_transformersv2.py": {
179
+ "size": 10639,
180
+ "sha256": "b5a7d235fe6212a47be6cd7d0e9765bb4475c901d9cc79b199c153910e7ec282"
181
+ },
182
+ "src/fastplms/models/boltz/vb_modules_trunkv2.py": {
183
+ "size": 25162,
184
+ "sha256": "b4429c720b6f324335e6483222b438bc7f6b1ddbc46f9ba2e6180b96819252e9"
185
+ },
186
+ "src/fastplms/models/boltz/vb_modules_utils.py": {
187
+ "size": 11567,
188
+ "sha256": "9d7e416062733c40283a32d38ed547ad9b160d9e66c5d4e3ee179c6f0e7ff055"
189
+ },
190
+ "src/fastplms/models/boltz/vb_potentials_potentials.py": {
191
+ "size": 36675,
192
+ "sha256": "62f654f99407f87f24b1753354478f72b0833d5c302323234e800b0d35b48cc9"
193
+ },
194
+ "src/fastplms/models/boltz/vb_potentials_schedules.py": {
195
+ "size": 2391,
196
+ "sha256": "41c4e59b4af49532dd81e7275413eb31582257ce4af85e33c364394644fbc4ad"
197
+ },
198
+ "src/fastplms/models/boltz/vb_tri_attn_attention.py": {
199
+ "size": 4719,
200
+ "sha256": "96cf947c9d47ccabf104a8dc558cf1b3d94f946ee2b9bc4f90e0fea7e1c131bc"
201
+ },
202
+ "src/fastplms/models/boltz/vb_tri_attn_primitives.py": {
203
+ "size": 9812,
204
+ "sha256": "746538afff040a5de4dd1f93e35a3547e1d08692056dac137de858e4e58baecd"
205
+ },
206
+ "src/fastplms/models/boltz/vb_tri_attn_utils.py": {
207
+ "size": 11300,
208
+ "sha256": "c5fb4adf3110de5699a7c1f639003413b3f8f4a106bd7ae4a3f89486be75b35e"
209
+ },
210
+ "src/fastplms/models/classification_probe.py": {
211
+ "size": 20365,
212
+ "sha256": "5efe95feab4674174ac88d30f9e0659d6c0f8035851b5bc351f3738d479e93a9"
213
+ },
214
+ "src/fastplms/models/dplm/__init__.py": {
215
+ "size": 0,
216
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
217
+ },
218
+ "src/fastplms/models/dplm/modeling_dplm.py": {
219
+ "size": 55368,
220
+ "sha256": "9b7f1ffebf82aa23d7ad763ca910fa897c27b6b5401b9f04f925bde65a3d70a5"
221
+ },
222
+ "src/fastplms/models/dplm2/__init__.py": {
223
+ "size": 127,
224
+ "sha256": "cda00bad9b68061cd2b480863507bb33d9b307f96ae9c454ce26fed746e33776"
225
+ },
226
+ "src/fastplms/models/dplm2/modeling_dplm2.py": {
227
+ "size": 58263,
228
+ "sha256": "6d037e4170452dfe0fffa69659b09175c3a2b032c03e05647e2a5fba37f0daa2"
229
+ },
230
+ "src/fastplms/models/dplm2/tokenization_dplm2.py": {
231
+ "size": 3761,
232
+ "sha256": "b527a626251adc4496d2046a048ea89f5f9326efcbc74114d766fd5b0736cdf2"
233
+ },
234
+ "src/fastplms/models/e1/__init__.py": {
235
+ "size": 0,
236
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
237
+ },
238
+ "src/fastplms/models/e1/attention.py": {
239
+ "size": 17944,
240
+ "sha256": "0800c4279b9beb8f9692eb030f375045448fd9d0afc5acfcb08f6e3f5b734d12"
241
+ },
242
+ "src/fastplms/models/e1/cache.py": {
243
+ "size": 9913,
244
+ "sha256": "bbe4a04036d0dc04b1b8d7fc40f67c19862d9e43180988aba26a2c20c9c9adc6"
245
+ },
246
+ "src/fastplms/models/e1/modeling_e1.py": {
247
+ "size": 98837,
248
+ "sha256": "60373e76e01de527a15c17e7377b4f78b77bf6519f2845ab32e3060c6b39d099"
249
+ },
250
+ "src/fastplms/models/e1/preparation.py": {
251
+ "size": 10628,
252
+ "sha256": "aad61cdd8bbbec9f410f7d4c2b327a0dddc9e612e2e007d359f883f693ed2a24"
253
+ },
254
+ "src/fastplms/models/e1/retrieval.py": {
255
+ "size": 71281,
256
+ "sha256": "7702c46763ff242d423a890edde33867e2273e82dc0bde43f6d92debce9d5f08"
257
+ },
258
+ "src/fastplms/models/esm2/__init__.py": {
259
+ "size": 0,
260
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
261
+ },
262
+ "src/fastplms/models/esm2/modeling_fastesm.py": {
263
+ "size": 45755,
264
+ "sha256": "e40442e9c2479b052b79a0912f375ca22c56ad5aa0dd75137e9bfabec9b1cefc"
265
+ },
266
+ "src/fastplms/models/esm3/__init__.py": {
267
+ "size": 303,
268
+ "sha256": "a2a678dc996ce8238c456cb667a5d63a342e28df72553546c6a8f5893f8f2545"
269
+ },
270
+ "src/fastplms/models/esm3/modeling_esm3.py": {
271
+ "size": 114023,
272
+ "sha256": "590cbf9a34ca439913c0b7d8221e8aef35bfaf98d7de533cc22df76d7d141995"
273
+ },
274
+ "src/fastplms/models/esm_plusplus/__init__.py": {
275
+ "size": 0,
276
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
277
+ },
278
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus.py": {
279
+ "size": 82069,
280
+ "sha256": "892ab6c3e69982713980ed83ecfb697c1842731b6415c9d0d448a1529942b0d2"
281
+ },
282
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus_sae.py": {
283
+ "size": 9994,
284
+ "sha256": "a8bc37695c29f0a91597bc8c95ff0516615944ac7ee35d18e56c23ebcd52ab5d"
285
+ },
286
+ "src/fastplms/models/esmfold/__init__.py": {
287
+ "size": 0,
288
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
289
+ },
290
+ "src/fastplms/models/esmfold/modeling_fast_esmfold.py": {
291
+ "size": 45830,
292
+ "sha256": "142b2aeb311bd8bfb6a0fa3a911d0ea9aefac27692afdfb34549fce0ac8b37fc"
293
+ },
294
+ "src/fastplms/models/esmfold2/__init__.py": {
295
+ "size": 2030,
296
+ "sha256": "167872850136ffb473f639dddc2323099bc534efe10fdad9fe2a799e444c7a18"
297
+ },
298
+ "src/fastplms/models/esmfold2/attention.py": {
299
+ "size": 1650,
300
+ "sha256": "3112740d2d5a27f8879b274159fae930f6949e80cf015c3f8d8405769e2ab5d7"
301
+ },
302
+ "src/fastplms/models/esmfold2/confidence_checkpoint.py": {
303
+ "size": 6754,
304
+ "sha256": "517534eab41d3496ce6b9c015b28dbb1105cab0776f92c9e2bb4355038ca772d"
305
+ },
306
+ "src/fastplms/models/esmfold2/configuration_esmfold2.py": {
307
+ "size": 14860,
308
+ "sha256": "d9687fd2031c7f2c003430df710377651dfb163d1a559b64a8c9dc8a11c0eaaf"
309
+ },
310
+ "src/fastplms/models/esmfold2/embedding.py": {
311
+ "size": 4409,
312
+ "sha256": "43c045ebf0502ce801d0f0abf04c7b53b85ba27e8c3eceb546a3c0b1c0581aa3"
313
+ },
314
+ "src/fastplms/models/esmfold2/esmfold2_affine3d.py": {
315
+ "size": 24771,
316
+ "sha256": "7e5a109942e4e8c4f2a83281d2d8b83a04c7cefb7931b27eca6c146af47f2d85"
317
+ },
318
+ "src/fastplms/models/esmfold2/esmfold2_aligner.py": {
319
+ "size": 3050,
320
+ "sha256": "0ac5f9bbfcb98dfa2967070f5f3c6e63b0d5f8dec08afe50ec0c6c14520e2798"
321
+ },
322
+ "src/fastplms/models/esmfold2/esmfold2_atom_indexer.py": {
323
+ "size": 928,
324
+ "sha256": "388d11d06e45062aba55934c0bc32925998ed5d85525bec00bafd9d67b98dc6a"
325
+ },
326
+ "src/fastplms/models/esmfold2/esmfold2_conformers.py": {
327
+ "size": 16121,
328
+ "sha256": "d5be3080a08f672a1f7d6a5d523cf1fe7d7559e7324faa5c735ccd78b4ddad35"
329
+ },
330
+ "src/fastplms/models/esmfold2/esmfold2_constants.py": {
331
+ "size": 6060,
332
+ "sha256": "65f978329690b46c4a3cc9f4815fe439b1e355be03ef2a9134b83ab889958751"
333
+ },
334
+ "src/fastplms/models/esmfold2/esmfold2_constants_esm3.py": {
335
+ "size": 2913,
336
+ "sha256": "6f9c8bbf0f80b6cd9ede136d142b51ff2b84f1b339cb6b6668c2669e8c2584b5"
337
+ },
338
+ "src/fastplms/models/esmfold2/esmfold2_input_builder.py": {
339
+ "size": 6860,
340
+ "sha256": "3fccb115fa79ac88e5e2bb09a2b7273fbc1ae5ca540947eb27d1e827c46baa7b"
341
+ },
342
+ "src/fastplms/models/esmfold2/esmfold2_metrics.py": {
343
+ "size": 10448,
344
+ "sha256": "a3674d794414181b94e5d42c80941c28740893cbc8f3f65a0eabcfd1f18ac7d1"
345
+ },
346
+ "src/fastplms/models/esmfold2/esmfold2_misc.py": {
347
+ "size": 16193,
348
+ "sha256": "e79990024d597bdaaa093a90a342029a1cb044618d4935d7d1d12584fb560541"
349
+ },
350
+ "src/fastplms/models/esmfold2/esmfold2_mmcif_parsing.py": {
351
+ "size": 16610,
352
+ "sha256": "8ed0fe1afdc15f148509f92f850707b5cb8e9eff019b46552ac7a83c04f3c9b4"
353
+ },
354
+ "src/fastplms/models/esmfold2/esmfold2_molecular_complex.py": {
355
+ "size": 40861,
356
+ "sha256": "fbb5a616fd0a4335c21ea814cdec9c184815effd21521ff980e93ce0b1a86a1e"
357
+ },
358
+ "src/fastplms/models/esmfold2/esmfold2_msa.py": {
359
+ "size": 20888,
360
+ "sha256": "55aaf57d3e0e983971102ae9582aece9e6fd4cc339aed672b61be999ff945087"
361
+ },
362
+ "src/fastplms/models/esmfold2/esmfold2_msa_filter_sequences.py": {
363
+ "size": 4012,
364
+ "sha256": "964f888b71a41974f2ee172a93631c8f3c32f643e67d346ac04d5a27a29e58e5"
365
+ },
366
+ "src/fastplms/models/esmfold2/esmfold2_normalize_coordinates.py": {
367
+ "size": 3030,
368
+ "sha256": "3b3c9854d58f7e498e7b1b6ec2ffed139233f54bb3abcb9b64edc82d1f8aefdc"
369
+ },
370
+ "src/fastplms/models/esmfold2/esmfold2_output.py": {
371
+ "size": 7860,
372
+ "sha256": "eb2dba85fd9368b76d2c5e7c426cc51f4fc67ec9b16e6463dc3eee126db0d0cd"
373
+ },
374
+ "src/fastplms/models/esmfold2/esmfold2_paired_msa.py": {
375
+ "size": 9426,
376
+ "sha256": "7c5147677d05c8c11023c71c7ee95ddc3cd629e95fbe6bb59a1df4cf56b8174e"
377
+ },
378
+ "src/fastplms/models/esmfold2/esmfold2_parsing.py": {
379
+ "size": 3896,
380
+ "sha256": "9404c5d8514281712681c4bb2fbe694420e0b6612a361d1f0186d294e1f1fb5d"
381
+ },
382
+ "src/fastplms/models/esmfold2/esmfold2_predicted_aligned_error.py": {
383
+ "size": 4889,
384
+ "sha256": "eae9a59a5da8d7e54b319619162c235c880666d475ff495cd14d015c0bfa22b1"
385
+ },
386
+ "src/fastplms/models/esmfold2/esmfold2_prepare_input.py": {
387
+ "size": 40736,
388
+ "sha256": "b75323afe401531eb17d4c23454fa024448e0563f8f94ad7adc3f91522a7a27a"
389
+ },
390
+ "src/fastplms/models/esmfold2/esmfold2_processor.py": {
391
+ "size": 13210,
392
+ "sha256": "de878f5a2165951535dd177de9eb8322f35308c612bba6f0363fb825c3d8e1a1"
393
+ },
394
+ "src/fastplms/models/esmfold2/esmfold2_protein_chain.py": {
395
+ "size": 63543,
396
+ "sha256": "601b522c1c4d518e3751edede644e351ce9fff60229ca8029d2f69559f4a5812"
397
+ },
398
+ "src/fastplms/models/esmfold2/esmfold2_protein_complex.py": {
399
+ "size": 52765,
400
+ "sha256": "cb68d3ad8491390961e95dcb7f0726a6d249666f95fc046f233c3d56aa0a9bd5"
401
+ },
402
+ "src/fastplms/models/esmfold2/esmfold2_protein_structure.py": {
403
+ "size": 9884,
404
+ "sha256": "dddf87923bca888605cf84c89c11a24dcf6f500ec99bf6ad545faa5f9ca04998"
405
+ },
406
+ "src/fastplms/models/esmfold2/esmfold2_residue_constants.py": {
407
+ "size": 32920,
408
+ "sha256": "9c2fe8f454300d7a676fc7160003232dd9ff926e2b48289853c2636ac9ba2d4b"
409
+ },
410
+ "src/fastplms/models/esmfold2/esmfold2_sequential_dataclass.py": {
411
+ "size": 3929,
412
+ "sha256": "453657d127b6a78371f760fcf0cedfeaef8bb5024eeb7a1ffa66742323c279cf"
413
+ },
414
+ "src/fastplms/models/esmfold2/esmfold2_system.py": {
415
+ "size": 1602,
416
+ "sha256": "5916250a3fa873983f06af668823c940813802a3db576bccf4e3343103564b7f"
417
+ },
418
+ "src/fastplms/models/esmfold2/esmfold2_types.py": {
419
+ "size": 876,
420
+ "sha256": "2ab7e6fe0e228f6c579ed4aa96a097f9904bd3c11253434994be7b04952f35bb"
421
+ },
422
+ "src/fastplms/models/esmfold2/esmfold2_utils_types.py": {
423
+ "size": 1060,
424
+ "sha256": "d00f3cd100b0151859831cd187d7fdb49d3aeda631544205d2ca63bb7d710879"
425
+ },
426
+ "src/fastplms/models/esmfold2/modeling_esmfold2.py": {
427
+ "size": 87462,
428
+ "sha256": "3bbdbe7c502a1b61926e0b3b2aee148deabaa97537dbc58622e8e10cca76b9a7"
429
+ },
430
+ "src/fastplms/models/esmfold2/modeling_esmfold2_classification.py": {
431
+ "size": 9423,
432
+ "sha256": "5f46ab5bac2359bf541551967b2652545892467456042023819a7f5cb9036388"
433
+ },
434
+ "src/fastplms/models/esmfold2/modeling_esmfold2_common.py": {
435
+ "size": 125129,
436
+ "sha256": "ec43392fce2a5d4b4bf258c4239a7d690b79d2197fb1f21ceb1059e78951ba44"
437
+ },
438
+ "src/fastplms/models/esmfold2/modeling_esmfold2_experimental.py": {
439
+ "size": 50224,
440
+ "sha256": "e11c52cceb0ba4f1cf5eca17eda00e8c2e0498686377371a88111d4061093bb3"
441
+ },
442
+ "src/fastplms/models/esmfold2/protein_utils.py": {
443
+ "size": 8093,
444
+ "sha256": "b7f40b19dc2c20e144b8fe3ccd0dbb2ec846526d015d6c8c922802d741be1f46"
445
+ },
446
+ "src/fastplms/models/esmfold2/reproducibility.py": {
447
+ "size": 1743,
448
+ "sha256": "18f13e266c9db67093fe756ca07bb93bb136a8e7b783a12d46bab82d0c69778d"
449
+ },
450
+ "src/fastplms/models/ttt.py": {
451
+ "size": 37758,
452
+ "sha256": "bbcd0d46cb2e1815f86cdb3d710fb89b2539a18d8ff03ce9306e88ca72d70309"
453
+ },
454
+ "src/fastplms/registry.py": {
455
+ "size": 68948,
456
+ "sha256": "c370419b34fc86a32c757b26601847be413a6b24384d435934d0431b99823d92"
457
+ },
458
+ "src/fastplms/runtime.py": {
459
+ "size": 2541,
460
+ "sha256": "9521c37fcd168bf9a4137277fb73672403ccf30d70d4845aa879fb22f42ddeb6"
461
+ },
462
+ "tools/confidence/__init__.py": {
463
+ "size": 58,
464
+ "sha256": "906ebf189faecc0e4db0667e06235ddedb5f55ccb8764007cefb94bebab4d1e2"
465
+ },
466
+ "tools/confidence/acceptance.py": {
467
+ "size": 11760,
468
+ "sha256": "8039c46a56731d560a50d6ea256f4b3241cd899049b40aaa23d01e5aa73246c6"
469
+ },
470
+ "tools/confidence/artifact_validation.py": {
471
+ "size": 4870,
472
+ "sha256": "39a762846cce12596318a84db9858ba4699763639a0c2d78a9e0a1c912b310ba"
473
+ },
474
+ "tools/confidence/budget.py": {
475
+ "size": 534,
476
+ "sha256": "5ff3392d24db6569c8104ac614f3318a1cdba57c09cc9b3207ebd7e936f974d2"
477
+ },
478
+ "tools/confidence/cache.py": {
479
+ "size": 24237,
480
+ "sha256": "0fb7cc37ffc340fd16c61f44cba3f7462593638aef3937f12fe8c4ff791001cf"
481
+ },
482
+ "tools/confidence/call_status.py": {
483
+ "size": 703,
484
+ "sha256": "8a1063424e355915c4d254a92df1b6e1dc8258a454316ee21bd4b0a5647e507a"
485
+ },
486
+ "tools/confidence/campaign.py": {
487
+ "size": 6460,
488
+ "sha256": "a4e91bfa6da4db22526a2ea21a671117d033c014158410c4678fa21593d8a821"
489
+ },
490
+ "tools/confidence/config.py": {
491
+ "size": 1708,
492
+ "sha256": "342e6fdf9cd8a7cd7f3f455e519b3ebd63132001b1c95e8ad4b8c5cf05077d9f"
493
+ },
494
+ "tools/confidence/data.py": {
495
+ "size": 33870,
496
+ "sha256": "acdbad582e458d05946b6403e2f42db59fe48a5b970dd01123be2951aea2bdaa"
497
+ },
498
+ "tools/confidence/evaluation.py": {
499
+ "size": 15661,
500
+ "sha256": "ef00a4ce9a27f2561689496e114cbc6d160bc186e6c1214cbb7ff1be23733992"
501
+ },
502
+ "tools/confidence/experiment_artifacts.py": {
503
+ "size": 27221,
504
+ "sha256": "1576e4b8bceadb7692482347e7119276248f333539101f9b71116f81c531bd94"
505
+ },
506
+ "tools/confidence/gpu_benchmark.py": {
507
+ "size": 5686,
508
+ "sha256": "cb95a65622fd21bb4f31a981e914ff1f2c38a956f5c1e564c3038c7db25bed82"
509
+ },
510
+ "tools/confidence/host.py": {
511
+ "size": 30130,
512
+ "sha256": "7c558dc2017aa455e604dbea9f959983fb2115052e1ead12791993979922516b"
513
+ },
514
+ "tools/confidence/labels.py": {
515
+ "size": 11283,
516
+ "sha256": "6eb50c11860f6b379f257586b7918dcfe4ef60b1fb84268c1909ea95bafcf7dd"
517
+ },
518
+ "tools/confidence/launch.py": {
519
+ "size": 9672,
520
+ "sha256": "472445e07620269e367350ab897f33ca174d1e03cafbcc026c8e4496a9d0ebcc"
521
+ },
522
+ "tools/confidence/launch_v2.py": {
523
+ "size": 1197,
524
+ "sha256": "458d229e06b9b378312e75ecf027a4f053908a9b59c60638a04092bb8f8dd52a"
525
+ },
526
+ "tools/confidence/live_binding.py": {
527
+ "size": 5275,
528
+ "sha256": "5d3222fa93d99828e7cdfe2d881989df48c4fe6308f1ec33058e215a5853e13f"
529
+ },
530
+ "tools/confidence/live_checkpoints.py": {
531
+ "size": 12365,
532
+ "sha256": "2338b1362cb7a31f5c54ec60e9a67c253d4dbcc0ad14bc6a405224e4ead92528"
533
+ },
534
+ "tools/confidence/metrics.py": {
535
+ "size": 15585,
536
+ "sha256": "cb9fca1f26616bc8ac0330976f8d52cede3b5ef61769221821e4de202e93b36a"
537
+ },
538
+ "tools/confidence/migration.py": {
539
+ "size": 9152,
540
+ "sha256": "ce4d841e236c0e984fa06edb25d22fbf3c782b9d779b98127032da7425e85982"
541
+ },
542
+ "tools/confidence/modal_app.py": {
543
+ "size": 11798,
544
+ "sha256": "d83c49d99ca8aeacaf9d908f63b574d171bc11de43181de808d80b0ac39f1d4b"
545
+ },
546
+ "tools/confidence/modal_gpu_benchmark.py": {
547
+ "size": 3916,
548
+ "sha256": "a359c911c70d10c82c41e186ec53f1ae66063fb7cc74a5beaf09b97b6f525c0b"
549
+ },
550
+ "tools/confidence/modal_live.py": {
551
+ "size": 7140,
552
+ "sha256": "d7ced062558e73dabf9bc1f1bdf7f7bb0c417693964790be076e3634151bebdf"
553
+ },
554
+ "tools/confidence/modal_resume.py": {
555
+ "size": 4021,
556
+ "sha256": "3a0f6615180d1040e146a5d1e1702ee1bb3446cb65cb86e00113e3a80de97eaa"
557
+ },
558
+ "tools/confidence/modal_v2.py": {
559
+ "size": 19116,
560
+ "sha256": "cb4bb142f9ad7307971271cce8fb861bb5c1b90375ba1bec9375e1f51dc60688"
561
+ },
562
+ "tools/confidence/online_smoke.py": {
563
+ "size": 17889,
564
+ "sha256": "a95b72b4ba244a9289dbcfecfc3201d4c033b3e41c2d6fe18a3b0ffd5a9b8f0a"
565
+ },
566
+ "tools/confidence/online_training.py": {
567
+ "size": 32956,
568
+ "sha256": "9326012b780bd739841f930c7fb08431e1b615b334581376a006c9b7fa9d44a4"
569
+ },
570
+ "tools/confidence/packaging.py": {
571
+ "size": 8909,
572
+ "sha256": "efd50d289d0a35e6634428ad37ed0812c5a00607924fb3159796b95e5a70a9bb"
573
+ },
574
+ "tools/confidence/ranking.py": {
575
+ "size": 3677,
576
+ "sha256": "32db0f3f46d8dc7770ad8a280169ed8fb2888024dd0d66964c3d7f0ab97de578"
577
+ },
578
+ "tools/confidence/recompute.py": {
579
+ "size": 10462,
580
+ "sha256": "e19c11e77632e70ca0d4dd9eb66dff0a0e04e4a5bb4db36148e6532edc10e225"
581
+ },
582
+ "tools/confidence/release.py": {
583
+ "size": 8949,
584
+ "sha256": "3ea71eac204b6c8f3c8783894544a06cd8101b0d23c1c3e5e4b4735fcce25201"
585
+ },
586
+ "tools/confidence/rollouts.py": {
587
+ "size": 21348,
588
+ "sha256": "1dad3e3e0dca8d8aa56070efd7b23dd4ffefd4109aab33c2f05843e87f940f1d"
589
+ },
590
+ "tools/confidence/selection.py": {
591
+ "size": 1003,
592
+ "sha256": "dd0e9c87dd48f63159b997e801bb0595f1ebf5c9eaed1f5b2bab1a3543054cf1"
593
+ },
594
+ "tools/confidence/splits.py": {
595
+ "size": 5417,
596
+ "sha256": "3ea939c6b6621c3e6e3eea14a1a08c682936fbebcb4c84a31ede7318f30fdbf4"
597
+ },
598
+ "tools/confidence/ssh.py": {
599
+ "size": 7530,
600
+ "sha256": "e80d0904563e71c343742e31093ba812c173039ac255317caf471c1c069cf538"
601
+ },
602
+ "tools/confidence/structure_metrics.py": {
603
+ "size": 13711,
604
+ "sha256": "a0b8825b367d0112b5a5e8acd06e66441067b049bfe1932df9390ec92c26d71b"
605
+ },
606
+ "tools/confidence/target_pool.py": {
607
+ "size": 11433,
608
+ "sha256": "fee32a81939c31276fce9a6e2dedd68ade5b135eb3a3e345f02ec6f4d523377c"
609
+ },
610
+ "tools/confidence/target_splits.py": {
611
+ "size": 8602,
612
+ "sha256": "15dcec9e83cda07562231bcc13212d7bce47303c8e7c94d9297e2a814bd62946"
613
+ },
614
+ "tools/confidence/test_evaluation.py": {
615
+ "size": 21444,
616
+ "sha256": "8df70e74dc300175ae3ac17ac0dc5c9813908a1ee86c4d66f639287cb0ea6c38"
617
+ },
618
+ "tools/confidence/training.py": {
619
+ "size": 37010,
620
+ "sha256": "e87056dfcf26cd98b4c42b191154f8bafe63622d3574db2220d0cc1c32399069"
621
+ },
622
+ "tools/confidence/v2_analysis.py": {
623
+ "size": 9958,
624
+ "sha256": "d6c41100acacfad1922ad43aa9b453ffcead3c36876230b80ebe0ddbffa4121e"
625
+ },
626
+ "tools/confidence/v2_campaign.py": {
627
+ "size": 10084,
628
+ "sha256": "c746a5160bffb0679527843682db07cba041842ad9cde9af93a45d6d166b1737"
629
+ },
630
+ "tools/confidence/v2_records.py": {
631
+ "size": 2110,
632
+ "sha256": "57a5be646cc29637b36732bf3927115a8f879cf0d91d82b26d5b850628ae86da"
633
+ },
634
+ "tools/confidence/workflow.py": {
635
+ "size": 12886,
636
+ "sha256": "abe8624dd5b980dcac43864e19649a4058bfed8fb8207d9014b0f50decadb1db"
637
+ },
638
+ "tools/execution/__init__.py": {
639
+ "size": 77,
640
+ "sha256": "1aa67ededb225e478f19423c2e70deacfd00a4734d6116c8ccc6eafb4a6fd4f8"
641
+ },
642
+ "tools/execution/budget.py": {
643
+ "size": 5146,
644
+ "sha256": "7bde890c6dad647d23208460085f92b93d6f9e497a85b5cb0b6e1a5c33514534"
645
+ },
646
+ "tools/execution/pricing.py": {
647
+ "size": 611,
648
+ "sha256": "a1758c1a0df12cb08612c40167a9df87975abb2c170d227ccf775009dbfb3d80"
649
+ },
650
+ "tools/execution/source.py": {
651
+ "size": 6786,
652
+ "sha256": "2dd3694f5975f571db741084ac1d56b6dd693818ef323f013dae21e8bbde7339"
653
+ }
654
+ },
655
+ "environment": {
656
+ "python": "3.12.10",
657
+ "platform": "Linux-4.19.0-gvisor-x86_64-with-glibc2.36",
658
+ "packages": {
659
+ "torch": "2.13.0+cu132",
660
+ "transformers": "5.13.0",
661
+ "numpy": "1.26.4",
662
+ "scipy": "1.16.3",
663
+ "safetensors": "0.8.0",
664
+ "DockQ": "2.1.3",
665
+ "tmtools": "0.2.0"
666
+ }
667
+ },
668
+ "gpu": "RTX-PRO-6000"
669
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/resume-history/dispatch-repair-1790175340580093400.json ADDED
@@ -0,0 +1,18 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "previous_dispatch": {
3
+ "previous_call_id": "fc-01M377QTNZRFQ4C4NCK6F0CB70",
4
+ "previous_call_status": "failed",
5
+ "prior_elapsed_seconds": 3600,
6
+ "remaining_seconds": 10800,
7
+ "deadline_unix": 1790185689.765543,
8
+ "gpu": "RTX-PRO-6000",
9
+ "retained_targets": 158,
10
+ "requested_targets": 576,
11
+ "status": "dispatched",
12
+ "failed_controller_call_id": "fc-01M37BR91E9K1JQ7ARQ30BEW7Y",
13
+ "app_id": "ap-ZdFl7mTiKfj0YrR66NfGqo",
14
+ "call_id": "fc-01M37C1B05DWA0VK67XRQAJNV5"
15
+ },
16
+ "reason": "Verified modal_app.py differed only by CRLF normalization; restored exact original source bytes",
17
+ "failed_call_id": "fc-01M37C1B05DWA0VK67XRQAJNV5"
18
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/resume.json ADDED
@@ -0,0 +1,1316 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "status": "resumed_after_terminal_call",
3
+ "created_at": "2026-09-23T14:48:10.334595+00:00",
4
+ "original_request": {
5
+ "size": 30542,
6
+ "sha256": "be5fb9a4b65a0c2abfa040069ffd4344a9d220ef8e595711c4849a62401e281a"
7
+ },
8
+ "prior_failure": null,
9
+ "retained_partial_files": {
10
+ "partial-records/000000.json": {
11
+ "size": 46614,
12
+ "sha256": "c1a1faa6e2f821a28fd7b783ac9f131635bfa89462f7a513f48d28af6d094c7f"
13
+ },
14
+ "partial-records/000001.json": {
15
+ "size": 47350,
16
+ "sha256": "b737082b440b10f8a011f845a86c306993778b1bd538c511ffd6a47b050d0a5b"
17
+ },
18
+ "partial-records/000002.json": {
19
+ "size": 47440,
20
+ "sha256": "5bdf190fca3b60a609d9ec241990958e1512f043c8314f427f48926f05a4f98f"
21
+ },
22
+ "partial-records/000003.json": {
23
+ "size": 47398,
24
+ "sha256": "f0ec4fa69761fa15285c13fb9f795aba43a22aa3107585616b11d3d08c580cc8"
25
+ },
26
+ "partial-records/000004.json": {
27
+ "size": 47708,
28
+ "sha256": "c8e5125428eed7accaa77409de3edf7ac63955269a4453c8cd91c06340e39afd"
29
+ },
30
+ "partial-records/000005.json": {
31
+ "size": 47316,
32
+ "sha256": "52059d29c187c4479f3e2dbf12d0a16249b9deb1ce50ab7b99a9ee2b89b4c319"
33
+ },
34
+ "partial-records/000006.json": {
35
+ "size": 47374,
36
+ "sha256": "8306656748a32a795a47ad53bebcb827a9287d86bae9aae45a7459b66e5eb01b"
37
+ },
38
+ "partial-records/000007.json": {
39
+ "size": 47604,
40
+ "sha256": "fb289eaeaa9aac5f1e90b508134d7b20a88bae5d692e38192870bd687579d829"
41
+ },
42
+ "partial-records/000008.json": {
43
+ "size": 47914,
44
+ "sha256": "36f8d61d494ebf9fdfeb56848063b67bf94aef113a883331c2f9d39028f2019a"
45
+ },
46
+ "partial-records/000009.json": {
47
+ "size": 47936,
48
+ "sha256": "947242c90dff4eaed789ed90879be25728a43f8021a5c6b21763ff80f3d4af7d"
49
+ },
50
+ "partial-records/000010.json": {
51
+ "size": 47827,
52
+ "sha256": "4c4520f4ae9aae57a136ac1de632d7ab9cb952a886828b03a3e4193dfa4720c7"
53
+ },
54
+ "partial-records/000011.json": {
55
+ "size": 48081,
56
+ "sha256": "dae4bfac2b8093234f69d89de2de41cd2c4e71cc2b878f1c3fa35167ec431961"
57
+ },
58
+ "partial-records/000012.json": {
59
+ "size": 46767,
60
+ "sha256": "95869325530f8031d78a50279e7d1d25fc457240d8f45f82a0200e7582c9bd23"
61
+ },
62
+ "partial-records/000013.json": {
63
+ "size": 47583,
64
+ "sha256": "07d08483e5db4f87841ba92a00f4078f9c1811e9b858093effca6dd341fbf359"
65
+ },
66
+ "partial-records/000014.json": {
67
+ "size": 46179,
68
+ "sha256": "eb0f04ee963848db2441151a35d0acbc90068c00955876241bde2fe2edc509ad"
69
+ },
70
+ "partial-records/000015.json": {
71
+ "size": 47377,
72
+ "sha256": "7e0e314fef6ecef85c0f39120a63c173eec4c8e43e4510b621dee4d87dd77758"
73
+ },
74
+ "partial-records/000016.json": {
75
+ "size": 47715,
76
+ "sha256": "54bf3b4c12bcda2b6d4abd42e8e3b885fa341fa149452cc6e9eedf3f20c87a6d"
77
+ },
78
+ "partial-records/000017.json": {
79
+ "size": 48095,
80
+ "sha256": "fc58d4417f78f521df3eefb07bf2ce71eca52d8861a0d9eee0203393308e0c75"
81
+ },
82
+ "partial-records/000018.json": {
83
+ "size": 47794,
84
+ "sha256": "98e2e2fd8b618ee86e760afe5e5e5839d986692b1259965cbfabf599c301a62b"
85
+ },
86
+ "partial-records/000019.json": {
87
+ "size": 46635,
88
+ "sha256": "cb9720e0726c96bd2c371e5f3f68915bb14fc29b3ec1656feed913c44b116e35"
89
+ },
90
+ "partial-records/000020.json": {
91
+ "size": 47226,
92
+ "sha256": "e095c3b827e0e4c1168104bfbd925bd852dd34fe3d56cd41dd47d344eccfa744"
93
+ },
94
+ "partial-records/000021.json": {
95
+ "size": 47151,
96
+ "sha256": "b1cc6300e4f561df5972681c1bc552972a772760e1c6beb69c27a9324e6889f3"
97
+ },
98
+ "partial-records/000022.json": {
99
+ "size": 47614,
100
+ "sha256": "56f4f679d993146b3d6dac114783ac86aafc4987ee9e262ed36a67c45dc08505"
101
+ },
102
+ "partial-records/000023.json": {
103
+ "size": 47659,
104
+ "sha256": "2dc4a7a39c5dd659ce6a5b491768f4954af564c3f04dc91106077b69b2788134"
105
+ },
106
+ "partial-records/000024.json": {
107
+ "size": 47323,
108
+ "sha256": "abc192b61a4a8a13dd290b784a7333ece1fd506c8755145e9dcd63aa131c20b9"
109
+ },
110
+ "partial-records/000025.json": {
111
+ "size": 46103,
112
+ "sha256": "84b01d5ec9512b3ebef6fe6bf1312e16391c11390fe32a8028dc74457ba03adc"
113
+ },
114
+ "partial-records/000026.json": {
115
+ "size": 47363,
116
+ "sha256": "b04bb1f638566be4ecbdd9f445a7e31276640e3ef4945096984b99a98a640dcb"
117
+ },
118
+ "partial-records/000027.json": {
119
+ "size": 47648,
120
+ "sha256": "9f150c1f69a94c375366e627d7262bd5d316fb2fd7d31a68992c950126f46c5b"
121
+ },
122
+ "partial-records/000028.json": {
123
+ "size": 47665,
124
+ "sha256": "29260227a232560e7053661f498d7688438cfbc2f2a1a1c24df8485bedeff620"
125
+ },
126
+ "partial-records/000029.json": {
127
+ "size": 47366,
128
+ "sha256": "5101eb9be300b3a96832c7951459b656aab6efd49b4d52fcceece9c182391801"
129
+ },
130
+ "partial-records/000030.json": {
131
+ "size": 46501,
132
+ "sha256": "8b1c6a3b7116dbd14fd585ea600b348b1131da88e1571a92154da873eabefec6"
133
+ },
134
+ "partial-records/000031.json": {
135
+ "size": 47639,
136
+ "sha256": "06cd7438f040f6d9cd581af246904ca3e486dc7fecbffe7961012561604ca9f6"
137
+ },
138
+ "partial-records/000032.json": {
139
+ "size": 47174,
140
+ "sha256": "bf404944ddacb2df8455ca9be6c1ffedb60d5a2f91afb5c043c218a2d933dd45"
141
+ },
142
+ "partial-records/000033.json": {
143
+ "size": 47127,
144
+ "sha256": "13940f0bcdbd24befd08ad69e6c82d31ceb56871d7768b0c18c80f57c1a60724"
145
+ },
146
+ "partial-records/000034.json": {
147
+ "size": 46470,
148
+ "sha256": "442699614b384b1870d98afa0c76a349357cb3424ba3e31bcc8178940c4a32d5"
149
+ },
150
+ "partial-records/000035.json": {
151
+ "size": 47493,
152
+ "sha256": "d2e4d4431fd05ddc0e8ae7223543f8a21ede57f7a12295f44b2489c23c1e4ed0"
153
+ },
154
+ "partial-records/000036.json": {
155
+ "size": 46908,
156
+ "sha256": "dba7a76841891bcae81db72091523f89c7dabfa79e5688132b1b37c460f0d087"
157
+ },
158
+ "partial-records/000037.json": {
159
+ "size": 47253,
160
+ "sha256": "bd6593fd65b279426fe8876a0bebaeb8c3efa9df12f1043a8e7e7d6ad778a3f4"
161
+ },
162
+ "partial-records/000038.json": {
163
+ "size": 46974,
164
+ "sha256": "711b80826a3d8fa13084c1151756ceb4a70790667105825078063fff3222d260"
165
+ },
166
+ "partial-records/000039.json": {
167
+ "size": 46407,
168
+ "sha256": "1e7acff2d26b826712d433b6bd2fad0375d9951c01f6bbcf4357347c7937ee41"
169
+ },
170
+ "partial-records/000040.json": {
171
+ "size": 47232,
172
+ "sha256": "3f17c54847825a9361c9145c4cebdd0488f6265c2263fe48da6f04f6b6a55bd7"
173
+ },
174
+ "partial-records/000041.json": {
175
+ "size": 46937,
176
+ "sha256": "e6fdc93c265bbe8736288a434b82c1a2d2ef29911df15b4e9fc7535b665f7a44"
177
+ },
178
+ "partial-records/000042.json": {
179
+ "size": 47141,
180
+ "sha256": "e34ff1ec2ef9f85b41cb244d10c37295bdc197786686e37b59a2c638c0103f3d"
181
+ },
182
+ "partial-records/000043.json": {
183
+ "size": 47211,
184
+ "sha256": "e82669edc150d3596d77ffda2b5ee47be8ce923425e3f9313d5c3ea44de8d531"
185
+ },
186
+ "partial-records/000044.json": {
187
+ "size": 47728,
188
+ "sha256": "9e349b4061297ac7fe44bf428ba62e44e27065b22dcabe4dabd75a11c1301786"
189
+ },
190
+ "partial-records/000045.json": {
191
+ "size": 46834,
192
+ "sha256": "a077beddbc6215ecf8679d1b66fbcd0f76c93283827a39130609b950a3ecc34e"
193
+ },
194
+ "partial-records/000046.json": {
195
+ "size": 47452,
196
+ "sha256": "4ab358edd3895d16094ac00b7a5ca5565775db1dec4911798db1d51b46de7baa"
197
+ },
198
+ "partial-records/000047.json": {
199
+ "size": 47706,
200
+ "sha256": "ec028f0e839f9d0ff9b19f012b8520caaa11de7e5a8c28bbdc7d85aecb9a2008"
201
+ },
202
+ "partial-records/000048.json": {
203
+ "size": 47501,
204
+ "sha256": "3701dab454f32c0474a28748d80bc37fe1119e7f1a1376dda061f137a891130f"
205
+ },
206
+ "partial-records/000049.json": {
207
+ "size": 46400,
208
+ "sha256": "54a007842788fa44009e12d6b590e9284124ab3900fe66a351d3f816abf0f871"
209
+ },
210
+ "partial-records/000050.json": {
211
+ "size": 47953,
212
+ "sha256": "445a14b33c2bccba83561840407f52f4abab2cd9557aef3bd583a84890e55ec6"
213
+ },
214
+ "partial-records/000051.json": {
215
+ "size": 47589,
216
+ "sha256": "82a27cdb36bef357d7763b13148be31dc7d9d4c03d66926967cc33551bafd0ea"
217
+ },
218
+ "partial-records/000052.json": {
219
+ "size": 47194,
220
+ "sha256": "001716fb69fec2e062cc9fb8cdc08d8433ea21e59348a6dfff9a9dcee3f87117"
221
+ },
222
+ "partial-records/000053.json": {
223
+ "size": 47119,
224
+ "sha256": "ccec1a06c99d1cd585dfe22eed6e7e09340939a5d6ae08e13b0d06b87ccc9956"
225
+ },
226
+ "partial-records/000054.json": {
227
+ "size": 47190,
228
+ "sha256": "cad21d56d5859ed0a4caeafe23d31af628e32eb2165bca9adb27c077805ba2af"
229
+ },
230
+ "partial-records/000055.json": {
231
+ "size": 47067,
232
+ "sha256": "b52a2b8a9c80bdeed75c6371e099569446db7e7f4f0131a15dda9b823913417f"
233
+ },
234
+ "partial-records/000056.json": {
235
+ "size": 47291,
236
+ "sha256": "08ac08a65af19f117c85e6c6e5d9ab212087e8537e4fd5c634ca732d883b7ac6"
237
+ },
238
+ "partial-records/000057.json": {
239
+ "size": 47630,
240
+ "sha256": "84f9a6fc8ecef130588d01abd8b9631e052fb11ed5c552908d37d982a5b3ce1d"
241
+ },
242
+ "partial-records/000058.json": {
243
+ "size": 47853,
244
+ "sha256": "bf43623ea8990536fc303b92f5a134384c771c7fb7627b3b7afdd348e331f986"
245
+ },
246
+ "partial-records/000059.json": {
247
+ "size": 46600,
248
+ "sha256": "5104cee0760d1503eb4565623664a80c49a1cc9df54911d9335b270042114afc"
249
+ },
250
+ "partial-records/000060.json": {
251
+ "size": 47657,
252
+ "sha256": "49b984361502e9f88394ea02fa3a66eb0526de49aed645ea41fb740bc778483f"
253
+ },
254
+ "partial-records/000061.json": {
255
+ "size": 46852,
256
+ "sha256": "a4d159928080fabe6b2c73116686b3eab461b7b863b40249564873c6e7f6286f"
257
+ },
258
+ "partial-records/000062.json": {
259
+ "size": 46942,
260
+ "sha256": "19eff99244f262d581db9aebb3e8412fc5eecbc6c4301081dbdb6e30ad034b5a"
261
+ },
262
+ "partial-records/000063.json": {
263
+ "size": 46889,
264
+ "sha256": "613a5979480e19e6c8564201abab0abe3ca20e2622cff048254e8a04a9bf4c74"
265
+ },
266
+ "partial-records/000064.json": {
267
+ "size": 47454,
268
+ "sha256": "e58476431267c8cafc04c422f37f913ddad173146fdac314cc6cda9621e3a9fa"
269
+ },
270
+ "partial-records/000065.json": {
271
+ "size": 47562,
272
+ "sha256": "b068578dd52d0c90965abed78dc78b22d761dfcfe40e37af5abdcd91dc6cd6d7"
273
+ },
274
+ "partial-records/000066.json": {
275
+ "size": 47021,
276
+ "sha256": "68246cbe10c962185e445f0644516908ece90732a55ebc203f1be6c805208838"
277
+ },
278
+ "partial-records/000067.json": {
279
+ "size": 47110,
280
+ "sha256": "8a1f5d520e027c01fb7ed4a59e21ea01ecb03342c2c96d605db60614b1288fd7"
281
+ },
282
+ "partial-records/000068.json": {
283
+ "size": 47376,
284
+ "sha256": "7eb2d727e2be64e3af9b0eaf8f5d8b1824d42319ca30630a44d19a2dd2bc4bfb"
285
+ },
286
+ "partial-records/000069.json": {
287
+ "size": 46977,
288
+ "sha256": "92e71cbb044ac396765e51338fa5b4130911bca8144af5ef6551325d48f1cfb8"
289
+ },
290
+ "partial-records/000070.json": {
291
+ "size": 47285,
292
+ "sha256": "de51fa2c420bec5e9837d3b40a849f307d907089d36556a5dfffbe055e67be31"
293
+ },
294
+ "partial-records/000071.json": {
295
+ "size": 47845,
296
+ "sha256": "e64aafe54471f778369a50fef133059c0b996e46c2826c3fe927c8b7111f5e7d"
297
+ },
298
+ "partial-records/000072.json": {
299
+ "size": 46432,
300
+ "sha256": "56137ac83628e5ae477a733ef9e2aea471bd0d7d13e286e4b037b1cd81b233cf"
301
+ },
302
+ "partial-records/000073.json": {
303
+ "size": 47892,
304
+ "sha256": "d4835512fa6dee145c0c20f49cf52218b78171389cfbf9d04b95954779272564"
305
+ },
306
+ "partial-records/000074.json": {
307
+ "size": 47552,
308
+ "sha256": "dde72ac23df7adf3095e480b8f061101f412457a2d97965b8580524a02be00bf"
309
+ },
310
+ "partial-records/000075.json": {
311
+ "size": 47517,
312
+ "sha256": "d03f0b3bac74dc1f9c7d3c8541664ce09bd8c4f5de209cc6092d00773b9c3928"
313
+ },
314
+ "partial-records/000076.json": {
315
+ "size": 47822,
316
+ "sha256": "39e64650964f9af1fd257bb7ddffcc52771fe5ae0229fabe8df9c6d342d1d90a"
317
+ },
318
+ "partial-records/000077.json": {
319
+ "size": 46063,
320
+ "sha256": "c9b7cd8393e660d1c3e89aee192b0dc6aa447432fa84e275d89e1d47584f06b7"
321
+ },
322
+ "partial-records/000078.json": {
323
+ "size": 47554,
324
+ "sha256": "1c0f9caf208c3d58a8982a041ffb3b1d814b0a4f2a32f84677756a38b9a6a005"
325
+ },
326
+ "partial-records/000079.json": {
327
+ "size": 46236,
328
+ "sha256": "1b741c22d16812e07cc415a82390f18ba17063fcd5749f65f45a5ce0508024e6"
329
+ },
330
+ "partial-records/000080.json": {
331
+ "size": 46405,
332
+ "sha256": "a7693ecb60f684d39f6bb281f9e5b47845fef4174861f31324ad65e3188df280"
333
+ },
334
+ "partial-records/000081.json": {
335
+ "size": 46851,
336
+ "sha256": "2da5e84d3fc2b71df54ba8d5eb2725af4ce88ffc5342e2e6e98b862d0d70b296"
337
+ },
338
+ "partial-records/000082.json": {
339
+ "size": 46896,
340
+ "sha256": "9fca07ec2b39467c248a3f93aede5ebad6fda44d647b574d975ff64bc0dcb909"
341
+ },
342
+ "partial-records/000083.json": {
343
+ "size": 47053,
344
+ "sha256": "587b08c8ecd8ca1eeda09f00707f469fb5a7a84743f9b87fddda6ce04483dd99"
345
+ },
346
+ "partial-records/000084.json": {
347
+ "size": 47186,
348
+ "sha256": "2bb1fe627ebe347a0f6f81c91d65e0320cf75025796d090db4ac88400159dcaa"
349
+ },
350
+ "partial-records/000085.json": {
351
+ "size": 47424,
352
+ "sha256": "549c437b2e4301aba565c1c61c53b7f363c5565f916232e5d7d2f31b479c96b3"
353
+ },
354
+ "partial-records/000086.json": {
355
+ "size": 46454,
356
+ "sha256": "0f4328f2ca0428c1498437740d626b8d26f086106bdd40c48405c8eb85baf769"
357
+ },
358
+ "partial-records/000087.json": {
359
+ "size": 47487,
360
+ "sha256": "1527212a367973f2bafd9ab3e77239b2e27df3489e99422e41098b94ee026da7"
361
+ },
362
+ "partial-records/000088.json": {
363
+ "size": 47587,
364
+ "sha256": "84d32155673a1f259c00fd93f65ad2ee0b857d4eb25ad920dd07d39c456d523a"
365
+ },
366
+ "partial-records/000089.json": {
367
+ "size": 48016,
368
+ "sha256": "7bea73db50db5ada835c86d626036cbcc756303bf75a1ef407eaab0f33b36912"
369
+ },
370
+ "partial-records/000090.json": {
371
+ "size": 47428,
372
+ "sha256": "4302a76b39901ec4e0c0ec9bbbe6501324d73b2894d5f07d4b80795f98e28c54"
373
+ },
374
+ "partial-records/000091.json": {
375
+ "size": 46896,
376
+ "sha256": "cbb22cd434dfc4c89a2f1bf513ebe4e1df0d8eff950c1e07b752a73a98fa6efb"
377
+ },
378
+ "partial-records/000092.json": {
379
+ "size": 47795,
380
+ "sha256": "d8b3b835d1901070014f1845dbd06860b12ba51dd4d13571895bf379b94813bc"
381
+ },
382
+ "partial-records/000093.json": {
383
+ "size": 47146,
384
+ "sha256": "c69a09eaf0e5cb84b1cfc7dc78a3f141a3bad311d30963d49689b07cc4d07b9b"
385
+ },
386
+ "partial-records/000094.json": {
387
+ "size": 46995,
388
+ "sha256": "ee8c3140955da84e2720b8b97be02e140fb12a635a9e17297b5eafb417b076ca"
389
+ },
390
+ "partial-records/000095.json": {
391
+ "size": 47155,
392
+ "sha256": "fc3f61504f048e5acee979c79b863cd33275d00d769e5a54e9bc9656d01ccb6b"
393
+ },
394
+ "partial-records/000096.json": {
395
+ "size": 47600,
396
+ "sha256": "75571e4ec33c070b6765313e497184fb9684f5ea12cd50a7a756ee969cb5cfae"
397
+ },
398
+ "partial-records/000097.json": {
399
+ "size": 47131,
400
+ "sha256": "bac163fc6d308e03229e42d79f1299473ab807d2d32de55045ffd09440bd2489"
401
+ },
402
+ "partial-records/000098.json": {
403
+ "size": 47154,
404
+ "sha256": "cb7227a3865f39ecaa17f8df65825eba4b074cd75af38a19113df329a65759c4"
405
+ },
406
+ "partial-records/000099.json": {
407
+ "size": 46938,
408
+ "sha256": "ad79714ac5b6937522563efe981b950f259cd0dd083bc1b2e45d6a09647c1d36"
409
+ },
410
+ "partial-records/000100.json": {
411
+ "size": 46135,
412
+ "sha256": "6b48771802c8a019e675e0d466f957e115cae1efd427be754a8835b555eef731"
413
+ },
414
+ "partial-records/000101.json": {
415
+ "size": 47230,
416
+ "sha256": "b731ee8170829995066ce2b59bcde39ca5be76cdee1fdf2af1e9953306e5f518"
417
+ },
418
+ "partial-records/000102.json": {
419
+ "size": 46294,
420
+ "sha256": "7987e8b594fa8a6b5e7b2bfe10ee2657306d3ea43880afcaff1f336503bee3ce"
421
+ },
422
+ "partial-records/000103.json": {
423
+ "size": 47992,
424
+ "sha256": "69c88d916952624f1221780dda0b5acdcbcdacac2133c11e26d3a2b026d66e89"
425
+ },
426
+ "partial-records/000104.json": {
427
+ "size": 46503,
428
+ "sha256": "e792960140a38f0c614c258f93edc4f1d251ff9676ee2ef8770496cddff635a3"
429
+ },
430
+ "partial-records/000105.json": {
431
+ "size": 47270,
432
+ "sha256": "71721f1553ce6073e2fd35169296dca4c0948a3c16dc55e5f6210967e1ec51c7"
433
+ },
434
+ "partial-records/000106.json": {
435
+ "size": 46395,
436
+ "sha256": "c1b834deeef90a21cdd34b939c0c0a36a42f3cf0a7461e4c9ce95771d341c705"
437
+ },
438
+ "partial-records/000107.json": {
439
+ "size": 46941,
440
+ "sha256": "3aad2a4ce7305e4f2eb70ace1496effcfd73b9c2a6a004b1aac7f5f7d776a2f0"
441
+ },
442
+ "partial-records/000108.json": {
443
+ "size": 46946,
444
+ "sha256": "31a8a147a0bc1588f1b268a56f4c8fa8df9a80d68902692cd023ae4b6de857ed"
445
+ },
446
+ "partial-records/000109.json": {
447
+ "size": 47225,
448
+ "sha256": "e2a16c3003e7f06cf2b1dc025b4d4cf076526ccf42bad49c19599ab0ae9f81c7"
449
+ },
450
+ "partial-records/000110.json": {
451
+ "size": 47037,
452
+ "sha256": "76f08f0c42758cc53f97f1e2a1d1d8227105807d364f443cec99bfae3e29f449"
453
+ },
454
+ "partial-records/000111.json": {
455
+ "size": 47586,
456
+ "sha256": "5ed37162b98dd10d0fd59b7dcefaf194e7af1aa69dc314188c269f6f36d675f2"
457
+ },
458
+ "partial-records/000112.json": {
459
+ "size": 47600,
460
+ "sha256": "90d9355de9646c0d32df424a54e804a7f1672179c696d1b85aedd7f3826b3941"
461
+ },
462
+ "partial-records/000113.json": {
463
+ "size": 47452,
464
+ "sha256": "fe64b65bcfbb4dfea3e5202ac16bc1df2e52e6f5b63224a05b8d4b0b62efa04e"
465
+ },
466
+ "partial-records/000114.json": {
467
+ "size": 46971,
468
+ "sha256": "ed6c9ed4137928506040fb122898f8acb6b58ee441913ee0888ebec3405216e5"
469
+ },
470
+ "partial-records/000115.json": {
471
+ "size": 47241,
472
+ "sha256": "855663729b03771ae5df35aaab986525da8c6e7d9d42183350d17036521dc10a"
473
+ },
474
+ "partial-records/000116.json": {
475
+ "size": 46869,
476
+ "sha256": "d3f01100ce174e5e234df74da8edc477d1050bb81abb2a033ea80ccc1551a484"
477
+ },
478
+ "partial-records/000117.json": {
479
+ "size": 47127,
480
+ "sha256": "d4338ee81d8c05ef57bfc9a05dea9d1d68347e6e423ec9144b070aa26af66b59"
481
+ },
482
+ "partial-records/000118.json": {
483
+ "size": 47904,
484
+ "sha256": "5e0e5b1cd9223f5ddfb3f0ec56ceeea87fafd15f35efb75c923fc5eb95c53807"
485
+ },
486
+ "partial-records/000119.json": {
487
+ "size": 46745,
488
+ "sha256": "8c212fb056720fb265ff573615ec15e42a5627a720d3110a6f9a726f97c707c2"
489
+ },
490
+ "partial-records/000120.json": {
491
+ "size": 47090,
492
+ "sha256": "7004a4ff98fce24d088ca60f1095ad849b4669666160053e8ae135e4598c65da"
493
+ },
494
+ "partial-records/000121.json": {
495
+ "size": 46948,
496
+ "sha256": "9dd3cdb72bb96845751149071502b4de7e0c7be515c2e829176320c76e70b0ea"
497
+ },
498
+ "partial-records/000122.json": {
499
+ "size": 47550,
500
+ "sha256": "75b616e2b24480f9af77650ba0772c8522fa49c90ac09406efb2ba128374ae3f"
501
+ },
502
+ "partial-records/000123.json": {
503
+ "size": 47358,
504
+ "sha256": "b40ec71b80efa3e62e98976b438e245653f2f622b2069fd697ce4942ea21d8f5"
505
+ },
506
+ "partial-records/000124.json": {
507
+ "size": 47392,
508
+ "sha256": "75930054e709c75986da7e6eda67889e2da163fc2bb4e33feb5a6052e621db20"
509
+ },
510
+ "partial-records/000125.json": {
511
+ "size": 47812,
512
+ "sha256": "03a165f169befc47b9256d8325eea2a3077dc0f1dc0a916a431799af7027f6c6"
513
+ },
514
+ "partial-records/000126.json": {
515
+ "size": 47049,
516
+ "sha256": "34454b7ee12d76075e9a00dcad2fc8d00f2b3267550424476af6bc920491f157"
517
+ },
518
+ "partial-records/000127.json": {
519
+ "size": 47059,
520
+ "sha256": "0ec75a6ef4c56785fc5f0f71cc0df39433dc804b926b16e3c46536805489f517"
521
+ },
522
+ "partial-records/000128.json": {
523
+ "size": 47428,
524
+ "sha256": "c1463ade561087ff4551cc82fbd023e7c3b3f00277e8a4d9f53094cb505ecf0b"
525
+ },
526
+ "partial-records/000129.json": {
527
+ "size": 47553,
528
+ "sha256": "b376235bc4fe355932f8cce784b4ee8c9ebd667f0bf66121f769b3aaff085cc8"
529
+ },
530
+ "partial-records/000130.json": {
531
+ "size": 47786,
532
+ "sha256": "ac9dc173a7b57849781d38aa49e204a0f72a3a11a5aaa42d9d745ae13a02e5f2"
533
+ },
534
+ "partial-records/000131.json": {
535
+ "size": 47633,
536
+ "sha256": "5c6a0cf76e03c4e582746e58d895393c6a28e7a7c4f52a360c0435c1d86c9c1d"
537
+ },
538
+ "partial-records/000132.json": {
539
+ "size": 46398,
540
+ "sha256": "c5137629247ea588751e887f8d4ef49bde27c2724fcd8d57b0761949de21044e"
541
+ },
542
+ "partial-records/000133.json": {
543
+ "size": 46757,
544
+ "sha256": "c2b95fc447856e913fd896f4ad94c03e2f057a745f3f5a60634d0a88c19220ed"
545
+ },
546
+ "partial-records/000134.json": {
547
+ "size": 47534,
548
+ "sha256": "3025569fb27612fdb58c0d6be798a9bf1c6b5cfefd75e3024ea55b5b612079e6"
549
+ },
550
+ "partial-records/000135.json": {
551
+ "size": 47808,
552
+ "sha256": "43187aa2b1dbe49b64ff8abd980486811bd747c34059428d2496b272b6b70ee5"
553
+ },
554
+ "partial-records/000136.json": {
555
+ "size": 46641,
556
+ "sha256": "83e37bf391d236c3cd6b1a8a4825694da733c823b65d1b8c3a6645c923a807b6"
557
+ },
558
+ "partial-records/000137.json": {
559
+ "size": 47328,
560
+ "sha256": "49f69fbadfc1124b0764a23c0f34fe12df3dc64a0fad1b44cb4fb00ad5215f03"
561
+ },
562
+ "partial-records/000138.json": {
563
+ "size": 47285,
564
+ "sha256": "4f3deec454d34ea0e1e501165e3a958c4a39f3068f36caf7997839e50ff60483"
565
+ },
566
+ "partial-records/000139.json": {
567
+ "size": 47310,
568
+ "sha256": "e1489a4a5d8664483c2d175714f6176a0ede048e1534b8a21015a2b3c64b9daa"
569
+ },
570
+ "partial-records/000140.json": {
571
+ "size": 47747,
572
+ "sha256": "f94f2b71124ca414b8bfe9cab7186b3314ac4b850b4348c960fa3352fd3531e4"
573
+ },
574
+ "partial-records/000141.json": {
575
+ "size": 47437,
576
+ "sha256": "079417ac8674e78cf9523b85211496a658b269f1628cc23b4c62744c9fcd7316"
577
+ },
578
+ "partial-records/000142.json": {
579
+ "size": 47290,
580
+ "sha256": "63de0ff992139b581be39d01c874a4035e9d761bfdb532cc77d59b3da92113eb"
581
+ },
582
+ "partial-records/000143.json": {
583
+ "size": 47434,
584
+ "sha256": "b941ae0617bb0c4004fcd00cfd246c847609f51a9d25d3df6a052399210449f7"
585
+ },
586
+ "partial-records/000144.json": {
587
+ "size": 47699,
588
+ "sha256": "13a25b337045ddd4b00fc23ccd602835f88a39d87a0587e7e8c969166ef218aa"
589
+ },
590
+ "partial-records/000145.json": {
591
+ "size": 47351,
592
+ "sha256": "4724477c62228e89a8763f1cb9dc570ddedaaf4c8e317333158f8122935972e9"
593
+ },
594
+ "partial-records/000146.json": {
595
+ "size": 46996,
596
+ "sha256": "a7a4dcf8953e3135982ea793af7d8c1760bcd3e497d7cf850565760bfbd73616"
597
+ },
598
+ "partial-records/000147.json": {
599
+ "size": 47582,
600
+ "sha256": "6c2dd2b9d5b5939bf9d3c850595669daa80e4e5aec0e1cb5defe6d0a566b1122"
601
+ },
602
+ "partial-records/000148.json": {
603
+ "size": 47955,
604
+ "sha256": "e3b45c91ee5bd284680730c2935b30d79fcf2dc164f12f9001109042146be7f1"
605
+ },
606
+ "partial-records/000149.json": {
607
+ "size": 47698,
608
+ "sha256": "e6bc2cb7d28ac073bf35c5d5d792f040b9cd9aca1da3f3006f2fd83cb8d6e075"
609
+ },
610
+ "partial-records/000150.json": {
611
+ "size": 47661,
612
+ "sha256": "bfb93f7a22211a25d465482d0a036cec1f00a851d527909e610f9df4a31e9497"
613
+ },
614
+ "partial-records/000151.json": {
615
+ "size": 45999,
616
+ "sha256": "58ccd8d9fe5460e25cf40a8c1b866a4f9725bd28205f3b2c58d35dc53aa1d193"
617
+ },
618
+ "partial-records/000152.json": {
619
+ "size": 46760,
620
+ "sha256": "75a78d9ecde106fbbb3e578c922005353f83267db2447d08b28a1b827c2085c9"
621
+ },
622
+ "partial-records/000153.json": {
623
+ "size": 46655,
624
+ "sha256": "0e3823b359beeac26d094d248293feb6d405b3b67f12a4da01b629d193b34748"
625
+ },
626
+ "partial-records/000154.json": {
627
+ "size": 46441,
628
+ "sha256": "9a26d41db670cd6677c479ddd9908dd49855cee29f4cb5b3c20afa0cb1fd8c20"
629
+ },
630
+ "partial-records/000155.json": {
631
+ "size": 46340,
632
+ "sha256": "8c6aa8858f42f83e65f36f4dc09692e07d12ab108710dce81f1754eff0b049cf"
633
+ },
634
+ "partial-records/000156.json": {
635
+ "size": 46837,
636
+ "sha256": "4717579a8c6949f5cbd8e6ab83dd5cdb245d46668bea6c22971b2d5ad664f7c1"
637
+ },
638
+ "partial-records/000157.json": {
639
+ "size": 47470,
640
+ "sha256": "7dd2aecc053b8b569ab466fae52af7aadc51b537d2ed82a0aff5bd042dacbb30"
641
+ }
642
+ },
643
+ "metadata": {
644
+ "previous_call_id": "fc-01M377QTNZRFQ4C4NCK6F0CB70",
645
+ "previous_call_status": "failed",
646
+ "prior_elapsed_seconds": 3600,
647
+ "remaining_seconds": 10800,
648
+ "deadline_unix": 1790185689.765543,
649
+ "gpu": "RTX-PRO-6000",
650
+ "retained_targets": 158,
651
+ "requested_targets": 576
652
+ },
653
+ "source_files": {
654
+ "src/fastplms/models.toml": {
655
+ "size": 83488,
656
+ "sha256": "0967a7805cd5ba107825a7dc473008d49c0334bd18714e1dfa9e51d0c42ee6f1"
657
+ },
658
+ "src/fastplms/__init__.py": {
659
+ "size": 1857,
660
+ "sha256": "8503e02debf24abc6d33c1913ff3eb9f245e63f7e62017e220d072c7393fdf2c"
661
+ },
662
+ "src/fastplms/attention/__init__.py": {
663
+ "size": 2259,
664
+ "sha256": "ae5c77f7293ae4a411fe1e57ac1e0ba69d47c077de8e46f6561f9af58ba2b5e2"
665
+ },
666
+ "src/fastplms/attention/_auto.py": {
667
+ "size": 7050,
668
+ "sha256": "d7adc2c3d9bb1a5b301e1a379ce28983f134ddbac9b44a3cf5bbf322cd7139a5"
669
+ },
670
+ "src/fastplms/attention/_core.py": {
671
+ "size": 35863,
672
+ "sha256": "3f3a09c590f566cb77d9586fd8ccff48496a67be0ace20e3db90165b54ffa07e"
673
+ },
674
+ "src/fastplms/attention/_kernel_lock.py": {
675
+ "size": 7063,
676
+ "sha256": "17adb859c994676b81df142e61d26ee5a723080c2a4fabc78c650b57300d51f8"
677
+ },
678
+ "src/fastplms/attention/interfaces.py": {
679
+ "size": 16976,
680
+ "sha256": "3b538e4b109f57b2a3a74cb1f0f7cbe8b43b6b6479f7161475cc1ec9bb260a08"
681
+ },
682
+ "src/fastplms/embeddings/__init__.py": {
683
+ "size": 1505,
684
+ "sha256": "cf0648de905a00ad16c0aece328eeb05f25739a4cf89b47b915e0f2b19c3ce26"
685
+ },
686
+ "src/fastplms/embeddings/batches.py": {
687
+ "size": 16175,
688
+ "sha256": "569693978dafddf585e45789b6ea9b45246c604def422f3c13dae54396503a25"
689
+ },
690
+ "src/fastplms/embeddings/identity.py": {
691
+ "size": 21198,
692
+ "sha256": "9508d14d2a997250e388dd94d2357eee28792e5da67509e917179160e627720d"
693
+ },
694
+ "src/fastplms/embeddings/inputs.py": {
695
+ "size": 9833,
696
+ "sha256": "b9c3f3eb228a6b21948afc141bd148d4d976cd4c142a9f180f36c33d6ff99599"
697
+ },
698
+ "src/fastplms/embeddings/output.py": {
699
+ "size": 9082,
700
+ "sha256": "1b86275772880de0f4ee51d7a125a877dab086cf56a4ec257dce7b9805cc8289"
701
+ },
702
+ "src/fastplms/embeddings/pooling.py": {
703
+ "size": 9876,
704
+ "sha256": "a393e78523e1fcb7362755619a580ea443814a410a995d90bd2d90f5b1d57bd9"
705
+ },
706
+ "src/fastplms/embeddings/runner.py": {
707
+ "size": 18432,
708
+ "sha256": "26371501163a88957701d9c4f4f6dbdc017c4b9ca3fb88cadc1b164c9334d565"
709
+ },
710
+ "src/fastplms/embeddings/storage.py": {
711
+ "size": 66427,
712
+ "sha256": "2091a59482370ed8830aa12cd8fde3d61e23a78368ee8267a89f8b7feb83cad3"
713
+ },
714
+ "src/fastplms/embeddings/types.py": {
715
+ "size": 6463,
716
+ "sha256": "c58f8c6a37a11a937c3f77b4e1617d5f213923d98ecaffddcdd283bd9dc42fe7"
717
+ },
718
+ "src/fastplms/models/__init__.py": {
719
+ "size": 336,
720
+ "sha256": "d3dd084f5e8fafcf2d0fe4a26e4ab9284d3f9414b1f9a5bd86e308a406447c43"
721
+ },
722
+ "src/fastplms/models/_diffusion_generation.py": {
723
+ "size": 20233,
724
+ "sha256": "1cadcca445ee9faa97f54cc1e47c30bb106d77344a7a91779b73f7517180b370"
725
+ },
726
+ "src/fastplms/models/_esm_rotary.py": {
727
+ "size": 4445,
728
+ "sha256": "b9b107633e9eb434b93a4f4cc0393bb8454d1a4ad67722038d177dffddd802b5"
729
+ },
730
+ "src/fastplms/models/ankh/__init__.py": {
731
+ "size": 0,
732
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
733
+ },
734
+ "src/fastplms/models/ankh/modeling_ankh.py": {
735
+ "size": 65086,
736
+ "sha256": "25f67d1e62da5bf3f2f9b1ce7bf032b6e0c4c3327f30eae05dd76037f9a08634"
737
+ },
738
+ "src/fastplms/models/boltz/__init__.py": {
739
+ "size": 347,
740
+ "sha256": "776dd9df11291750ddc4389f5f58fdd52c7e596db4b95c28129cb639f3903c43"
741
+ },
742
+ "src/fastplms/models/boltz/_pair_attention.py": {
743
+ "size": 1816,
744
+ "sha256": "736c4553adc2b871b04db325fbd2d8ee6f1c18bbb4ffacb440a5c2d76304169b"
745
+ },
746
+ "src/fastplms/models/boltz/cif_writer.py": {
747
+ "size": 5779,
748
+ "sha256": "6a6124240c4c9ffdc6de67df731c1eb05aed5dbaae60dd0192ab3b31c9556d42"
749
+ },
750
+ "src/fastplms/models/boltz/minimal_featurizer.py": {
751
+ "size": 38227,
752
+ "sha256": "c896a132c505e13d35aa51dd68eb78c37e873010d5c402f0ab78cf43bf9dd3cf"
753
+ },
754
+ "src/fastplms/models/boltz/minimal_structures.py": {
755
+ "size": 514,
756
+ "sha256": "41715893ae68fd75a6b47e7ef99c4db50eb460223d09717e5f6c074f39c59a68"
757
+ },
758
+ "src/fastplms/models/boltz/modeling_boltz2.py": {
759
+ "size": 46081,
760
+ "sha256": "6ff78cfcbe10cfdb2fdd2da15ed9f6a7e37f1bc6ed66b2e168506e14ccbb36f9"
761
+ },
762
+ "src/fastplms/models/boltz/vb_const.py": {
763
+ "size": 7587,
764
+ "sha256": "4b31e76f49710b19ce8ce9bb4cb2906bee79c000d1f0960e2440fd25ad9f967d"
765
+ },
766
+ "src/fastplms/models/boltz/vb_layers_attention.py": {
767
+ "size": 3797,
768
+ "sha256": "71918a961e16c2133b69274eea77e73d11325a79d2e117da452163606e0982c0"
769
+ },
770
+ "src/fastplms/models/boltz/vb_layers_attentionv2.py": {
771
+ "size": 2776,
772
+ "sha256": "50297a67887a95ba74bf583b7fb90c3e74d391118f484a39d8f419d6c0d43bb5"
773
+ },
774
+ "src/fastplms/models/boltz/vb_layers_confidence_utils.py": {
775
+ "size": 10427,
776
+ "sha256": "77099208f4bbd18b895ac1ef854ba1ee22762f64024037f95712c6f6b537b8fb"
777
+ },
778
+ "src/fastplms/models/boltz/vb_layers_dropout.py": {
779
+ "size": 1505,
780
+ "sha256": "311c1c9770c23df5148c066e8c8a054d6a32830c9800d46ba9f17e74670fb8cd"
781
+ },
782
+ "src/fastplms/models/boltz/vb_layers_initialize.py": {
783
+ "size": 3152,
784
+ "sha256": "c0e52df5833c3459761a4d042d7d3afff7e336cf4e8d3e66a59c6358c268e2c0"
785
+ },
786
+ "src/fastplms/models/boltz/vb_layers_outer_product_mean.py": {
787
+ "size": 4267,
788
+ "sha256": "107d37a5572322e45bb279f164dada9e9fbc8542a245ce65342727aed2bc7390"
789
+ },
790
+ "src/fastplms/models/boltz/vb_layers_pair_averaging.py": {
791
+ "size": 4487,
792
+ "sha256": "cbec19c03dada6185bd053d50b01fcbf7958a839449dda24d465d98412199806"
793
+ },
794
+ "src/fastplms/models/boltz/vb_layers_pairformer.py": {
795
+ "size": 11493,
796
+ "sha256": "8de7846d1ff203e88368ce9dd26bdb91c6150991994413b5ca173714e425ec56"
797
+ },
798
+ "src/fastplms/models/boltz/vb_layers_transition.py": {
799
+ "size": 3093,
800
+ "sha256": "0a1ce258ce88f1571937b4141fb94e39e700cb6e2538400c9468bc0db6ac6ad4"
801
+ },
802
+ "src/fastplms/models/boltz/vb_layers_triangular_mult.py": {
803
+ "size": 4753,
804
+ "sha256": "fc37d98cd6b0be23e497dce53a05332460f2fa37f782f9a948e25abc254942c7"
805
+ },
806
+ "src/fastplms/models/boltz/vb_loss_diffusionv2.py": {
807
+ "size": 6506,
808
+ "sha256": "8a596179bf54f47334bb7da5fb3383581b7a2c3db28879d7c42019a31f5395cd"
809
+ },
810
+ "src/fastplms/models/boltz/vb_modules_confidencev2.py": {
811
+ "size": 25062,
812
+ "sha256": "cfa10e8f10405b230bd764f702c0d39f17ab7b42386df0e59adc681467d1f365"
813
+ },
814
+ "src/fastplms/models/boltz/vb_modules_diffusion_conditioning.py": {
815
+ "size": 4873,
816
+ "sha256": "ab4a9e5a7ccbdac62ff3cc4e04b65188bd442d2ede036ca7971fbefded95990f"
817
+ },
818
+ "src/fastplms/models/boltz/vb_modules_diffusionv2.py": {
819
+ "size": 30705,
820
+ "sha256": "717e6475df080f5941804cfbdfb6a193d5ecd788ea9a01e0dbb073c65460663d"
821
+ },
822
+ "src/fastplms/models/boltz/vb_modules_encodersv2.py": {
823
+ "size": 25374,
824
+ "sha256": "97f0db310f5bbc07da9eee7cb1e6c1bcbe24bc6154add0de932a88b094928193"
825
+ },
826
+ "src/fastplms/models/boltz/vb_modules_transformersv2.py": {
827
+ "size": 10639,
828
+ "sha256": "b5a7d235fe6212a47be6cd7d0e9765bb4475c901d9cc79b199c153910e7ec282"
829
+ },
830
+ "src/fastplms/models/boltz/vb_modules_trunkv2.py": {
831
+ "size": 25162,
832
+ "sha256": "b4429c720b6f324335e6483222b438bc7f6b1ddbc46f9ba2e6180b96819252e9"
833
+ },
834
+ "src/fastplms/models/boltz/vb_modules_utils.py": {
835
+ "size": 11567,
836
+ "sha256": "9d7e416062733c40283a32d38ed547ad9b160d9e66c5d4e3ee179c6f0e7ff055"
837
+ },
838
+ "src/fastplms/models/boltz/vb_potentials_potentials.py": {
839
+ "size": 36675,
840
+ "sha256": "62f654f99407f87f24b1753354478f72b0833d5c302323234e800b0d35b48cc9"
841
+ },
842
+ "src/fastplms/models/boltz/vb_potentials_schedules.py": {
843
+ "size": 2391,
844
+ "sha256": "41c4e59b4af49532dd81e7275413eb31582257ce4af85e33c364394644fbc4ad"
845
+ },
846
+ "src/fastplms/models/boltz/vb_tri_attn_attention.py": {
847
+ "size": 4719,
848
+ "sha256": "96cf947c9d47ccabf104a8dc558cf1b3d94f946ee2b9bc4f90e0fea7e1c131bc"
849
+ },
850
+ "src/fastplms/models/boltz/vb_tri_attn_primitives.py": {
851
+ "size": 9812,
852
+ "sha256": "746538afff040a5de4dd1f93e35a3547e1d08692056dac137de858e4e58baecd"
853
+ },
854
+ "src/fastplms/models/boltz/vb_tri_attn_utils.py": {
855
+ "size": 11300,
856
+ "sha256": "c5fb4adf3110de5699a7c1f639003413b3f8f4a106bd7ae4a3f89486be75b35e"
857
+ },
858
+ "src/fastplms/models/classification_probe.py": {
859
+ "size": 20365,
860
+ "sha256": "5efe95feab4674174ac88d30f9e0659d6c0f8035851b5bc351f3738d479e93a9"
861
+ },
862
+ "src/fastplms/models/dplm/__init__.py": {
863
+ "size": 0,
864
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
865
+ },
866
+ "src/fastplms/models/dplm/modeling_dplm.py": {
867
+ "size": 55368,
868
+ "sha256": "9b7f1ffebf82aa23d7ad763ca910fa897c27b6b5401b9f04f925bde65a3d70a5"
869
+ },
870
+ "src/fastplms/models/dplm2/__init__.py": {
871
+ "size": 127,
872
+ "sha256": "cda00bad9b68061cd2b480863507bb33d9b307f96ae9c454ce26fed746e33776"
873
+ },
874
+ "src/fastplms/models/dplm2/modeling_dplm2.py": {
875
+ "size": 58263,
876
+ "sha256": "6d037e4170452dfe0fffa69659b09175c3a2b032c03e05647e2a5fba37f0daa2"
877
+ },
878
+ "src/fastplms/models/dplm2/tokenization_dplm2.py": {
879
+ "size": 3761,
880
+ "sha256": "b527a626251adc4496d2046a048ea89f5f9326efcbc74114d766fd5b0736cdf2"
881
+ },
882
+ "src/fastplms/models/e1/__init__.py": {
883
+ "size": 0,
884
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
885
+ },
886
+ "src/fastplms/models/e1/attention.py": {
887
+ "size": 17944,
888
+ "sha256": "0800c4279b9beb8f9692eb030f375045448fd9d0afc5acfcb08f6e3f5b734d12"
889
+ },
890
+ "src/fastplms/models/e1/cache.py": {
891
+ "size": 9913,
892
+ "sha256": "bbe4a04036d0dc04b1b8d7fc40f67c19862d9e43180988aba26a2c20c9c9adc6"
893
+ },
894
+ "src/fastplms/models/e1/modeling_e1.py": {
895
+ "size": 98837,
896
+ "sha256": "60373e76e01de527a15c17e7377b4f78b77bf6519f2845ab32e3060c6b39d099"
897
+ },
898
+ "src/fastplms/models/e1/preparation.py": {
899
+ "size": 10628,
900
+ "sha256": "aad61cdd8bbbec9f410f7d4c2b327a0dddc9e612e2e007d359f883f693ed2a24"
901
+ },
902
+ "src/fastplms/models/e1/retrieval.py": {
903
+ "size": 71281,
904
+ "sha256": "7702c46763ff242d423a890edde33867e2273e82dc0bde43f6d92debce9d5f08"
905
+ },
906
+ "src/fastplms/models/esm2/__init__.py": {
907
+ "size": 0,
908
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
909
+ },
910
+ "src/fastplms/models/esm2/modeling_fastesm.py": {
911
+ "size": 45755,
912
+ "sha256": "e40442e9c2479b052b79a0912f375ca22c56ad5aa0dd75137e9bfabec9b1cefc"
913
+ },
914
+ "src/fastplms/models/esm3/__init__.py": {
915
+ "size": 303,
916
+ "sha256": "a2a678dc996ce8238c456cb667a5d63a342e28df72553546c6a8f5893f8f2545"
917
+ },
918
+ "src/fastplms/models/esm3/modeling_esm3.py": {
919
+ "size": 114023,
920
+ "sha256": "590cbf9a34ca439913c0b7d8221e8aef35bfaf98d7de533cc22df76d7d141995"
921
+ },
922
+ "src/fastplms/models/esm_plusplus/__init__.py": {
923
+ "size": 0,
924
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
925
+ },
926
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus.py": {
927
+ "size": 82069,
928
+ "sha256": "892ab6c3e69982713980ed83ecfb697c1842731b6415c9d0d448a1529942b0d2"
929
+ },
930
+ "src/fastplms/models/esm_plusplus/modeling_esm_plusplus_sae.py": {
931
+ "size": 9994,
932
+ "sha256": "a8bc37695c29f0a91597bc8c95ff0516615944ac7ee35d18e56c23ebcd52ab5d"
933
+ },
934
+ "src/fastplms/models/esmfold/__init__.py": {
935
+ "size": 0,
936
+ "sha256": "e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"
937
+ },
938
+ "src/fastplms/models/esmfold/modeling_fast_esmfold.py": {
939
+ "size": 45830,
940
+ "sha256": "142b2aeb311bd8bfb6a0fa3a911d0ea9aefac27692afdfb34549fce0ac8b37fc"
941
+ },
942
+ "src/fastplms/models/esmfold2/__init__.py": {
943
+ "size": 2030,
944
+ "sha256": "167872850136ffb473f639dddc2323099bc534efe10fdad9fe2a799e444c7a18"
945
+ },
946
+ "src/fastplms/models/esmfold2/attention.py": {
947
+ "size": 1650,
948
+ "sha256": "3112740d2d5a27f8879b274159fae930f6949e80cf015c3f8d8405769e2ab5d7"
949
+ },
950
+ "src/fastplms/models/esmfold2/confidence_checkpoint.py": {
951
+ "size": 6754,
952
+ "sha256": "517534eab41d3496ce6b9c015b28dbb1105cab0776f92c9e2bb4355038ca772d"
953
+ },
954
+ "src/fastplms/models/esmfold2/configuration_esmfold2.py": {
955
+ "size": 14860,
956
+ "sha256": "d9687fd2031c7f2c003430df710377651dfb163d1a559b64a8c9dc8a11c0eaaf"
957
+ },
958
+ "src/fastplms/models/esmfold2/embedding.py": {
959
+ "size": 4409,
960
+ "sha256": "43c045ebf0502ce801d0f0abf04c7b53b85ba27e8c3eceb546a3c0b1c0581aa3"
961
+ },
962
+ "src/fastplms/models/esmfold2/esmfold2_affine3d.py": {
963
+ "size": 24771,
964
+ "sha256": "7e5a109942e4e8c4f2a83281d2d8b83a04c7cefb7931b27eca6c146af47f2d85"
965
+ },
966
+ "src/fastplms/models/esmfold2/esmfold2_aligner.py": {
967
+ "size": 3050,
968
+ "sha256": "0ac5f9bbfcb98dfa2967070f5f3c6e63b0d5f8dec08afe50ec0c6c14520e2798"
969
+ },
970
+ "src/fastplms/models/esmfold2/esmfold2_atom_indexer.py": {
971
+ "size": 928,
972
+ "sha256": "388d11d06e45062aba55934c0bc32925998ed5d85525bec00bafd9d67b98dc6a"
973
+ },
974
+ "src/fastplms/models/esmfold2/esmfold2_conformers.py": {
975
+ "size": 16121,
976
+ "sha256": "d5be3080a08f672a1f7d6a5d523cf1fe7d7559e7324faa5c735ccd78b4ddad35"
977
+ },
978
+ "src/fastplms/models/esmfold2/esmfold2_constants.py": {
979
+ "size": 6060,
980
+ "sha256": "65f978329690b46c4a3cc9f4815fe439b1e355be03ef2a9134b83ab889958751"
981
+ },
982
+ "src/fastplms/models/esmfold2/esmfold2_constants_esm3.py": {
983
+ "size": 2913,
984
+ "sha256": "6f9c8bbf0f80b6cd9ede136d142b51ff2b84f1b339cb6b6668c2669e8c2584b5"
985
+ },
986
+ "src/fastplms/models/esmfold2/esmfold2_input_builder.py": {
987
+ "size": 6860,
988
+ "sha256": "3fccb115fa79ac88e5e2bb09a2b7273fbc1ae5ca540947eb27d1e827c46baa7b"
989
+ },
990
+ "src/fastplms/models/esmfold2/esmfold2_metrics.py": {
991
+ "size": 10448,
992
+ "sha256": "a3674d794414181b94e5d42c80941c28740893cbc8f3f65a0eabcfd1f18ac7d1"
993
+ },
994
+ "src/fastplms/models/esmfold2/esmfold2_misc.py": {
995
+ "size": 16193,
996
+ "sha256": "e79990024d597bdaaa093a90a342029a1cb044618d4935d7d1d12584fb560541"
997
+ },
998
+ "src/fastplms/models/esmfold2/esmfold2_mmcif_parsing.py": {
999
+ "size": 16610,
1000
+ "sha256": "8ed0fe1afdc15f148509f92f850707b5cb8e9eff019b46552ac7a83c04f3c9b4"
1001
+ },
1002
+ "src/fastplms/models/esmfold2/esmfold2_molecular_complex.py": {
1003
+ "size": 40861,
1004
+ "sha256": "fbb5a616fd0a4335c21ea814cdec9c184815effd21521ff980e93ce0b1a86a1e"
1005
+ },
1006
+ "src/fastplms/models/esmfold2/esmfold2_msa.py": {
1007
+ "size": 20888,
1008
+ "sha256": "55aaf57d3e0e983971102ae9582aece9e6fd4cc339aed672b61be999ff945087"
1009
+ },
1010
+ "src/fastplms/models/esmfold2/esmfold2_msa_filter_sequences.py": {
1011
+ "size": 4012,
1012
+ "sha256": "964f888b71a41974f2ee172a93631c8f3c32f643e67d346ac04d5a27a29e58e5"
1013
+ },
1014
+ "src/fastplms/models/esmfold2/esmfold2_normalize_coordinates.py": {
1015
+ "size": 3030,
1016
+ "sha256": "3b3c9854d58f7e498e7b1b6ec2ffed139233f54bb3abcb9b64edc82d1f8aefdc"
1017
+ },
1018
+ "src/fastplms/models/esmfold2/esmfold2_output.py": {
1019
+ "size": 7860,
1020
+ "sha256": "eb2dba85fd9368b76d2c5e7c426cc51f4fc67ec9b16e6463dc3eee126db0d0cd"
1021
+ },
1022
+ "src/fastplms/models/esmfold2/esmfold2_paired_msa.py": {
1023
+ "size": 9426,
1024
+ "sha256": "7c5147677d05c8c11023c71c7ee95ddc3cd629e95fbe6bb59a1df4cf56b8174e"
1025
+ },
1026
+ "src/fastplms/models/esmfold2/esmfold2_parsing.py": {
1027
+ "size": 3896,
1028
+ "sha256": "9404c5d8514281712681c4bb2fbe694420e0b6612a361d1f0186d294e1f1fb5d"
1029
+ },
1030
+ "src/fastplms/models/esmfold2/esmfold2_predicted_aligned_error.py": {
1031
+ "size": 4889,
1032
+ "sha256": "eae9a59a5da8d7e54b319619162c235c880666d475ff495cd14d015c0bfa22b1"
1033
+ },
1034
+ "src/fastplms/models/esmfold2/esmfold2_prepare_input.py": {
1035
+ "size": 40736,
1036
+ "sha256": "b75323afe401531eb17d4c23454fa024448e0563f8f94ad7adc3f91522a7a27a"
1037
+ },
1038
+ "src/fastplms/models/esmfold2/esmfold2_processor.py": {
1039
+ "size": 13210,
1040
+ "sha256": "de878f5a2165951535dd177de9eb8322f35308c612bba6f0363fb825c3d8e1a1"
1041
+ },
1042
+ "src/fastplms/models/esmfold2/esmfold2_protein_chain.py": {
1043
+ "size": 63543,
1044
+ "sha256": "601b522c1c4d518e3751edede644e351ce9fff60229ca8029d2f69559f4a5812"
1045
+ },
1046
+ "src/fastplms/models/esmfold2/esmfold2_protein_complex.py": {
1047
+ "size": 52765,
1048
+ "sha256": "cb68d3ad8491390961e95dcb7f0726a6d249666f95fc046f233c3d56aa0a9bd5"
1049
+ },
1050
+ "src/fastplms/models/esmfold2/esmfold2_protein_structure.py": {
1051
+ "size": 9884,
1052
+ "sha256": "dddf87923bca888605cf84c89c11a24dcf6f500ec99bf6ad545faa5f9ca04998"
1053
+ },
1054
+ "src/fastplms/models/esmfold2/esmfold2_residue_constants.py": {
1055
+ "size": 32920,
1056
+ "sha256": "9c2fe8f454300d7a676fc7160003232dd9ff926e2b48289853c2636ac9ba2d4b"
1057
+ },
1058
+ "src/fastplms/models/esmfold2/esmfold2_sequential_dataclass.py": {
1059
+ "size": 3929,
1060
+ "sha256": "453657d127b6a78371f760fcf0cedfeaef8bb5024eeb7a1ffa66742323c279cf"
1061
+ },
1062
+ "src/fastplms/models/esmfold2/esmfold2_system.py": {
1063
+ "size": 1602,
1064
+ "sha256": "5916250a3fa873983f06af668823c940813802a3db576bccf4e3343103564b7f"
1065
+ },
1066
+ "src/fastplms/models/esmfold2/esmfold2_types.py": {
1067
+ "size": 876,
1068
+ "sha256": "2ab7e6fe0e228f6c579ed4aa96a097f9904bd3c11253434994be7b04952f35bb"
1069
+ },
1070
+ "src/fastplms/models/esmfold2/esmfold2_utils_types.py": {
1071
+ "size": 1060,
1072
+ "sha256": "d00f3cd100b0151859831cd187d7fdb49d3aeda631544205d2ca63bb7d710879"
1073
+ },
1074
+ "src/fastplms/models/esmfold2/modeling_esmfold2.py": {
1075
+ "size": 87462,
1076
+ "sha256": "3bbdbe7c502a1b61926e0b3b2aee148deabaa97537dbc58622e8e10cca76b9a7"
1077
+ },
1078
+ "src/fastplms/models/esmfold2/modeling_esmfold2_classification.py": {
1079
+ "size": 9423,
1080
+ "sha256": "5f46ab5bac2359bf541551967b2652545892467456042023819a7f5cb9036388"
1081
+ },
1082
+ "src/fastplms/models/esmfold2/modeling_esmfold2_common.py": {
1083
+ "size": 125129,
1084
+ "sha256": "ec43392fce2a5d4b4bf258c4239a7d690b79d2197fb1f21ceb1059e78951ba44"
1085
+ },
1086
+ "src/fastplms/models/esmfold2/modeling_esmfold2_experimental.py": {
1087
+ "size": 50224,
1088
+ "sha256": "e11c52cceb0ba4f1cf5eca17eda00e8c2e0498686377371a88111d4061093bb3"
1089
+ },
1090
+ "src/fastplms/models/esmfold2/protein_utils.py": {
1091
+ "size": 8093,
1092
+ "sha256": "b7f40b19dc2c20e144b8fe3ccd0dbb2ec846526d015d6c8c922802d741be1f46"
1093
+ },
1094
+ "src/fastplms/models/esmfold2/reproducibility.py": {
1095
+ "size": 1743,
1096
+ "sha256": "18f13e266c9db67093fe756ca07bb93bb136a8e7b783a12d46bab82d0c69778d"
1097
+ },
1098
+ "src/fastplms/models/ttt.py": {
1099
+ "size": 37758,
1100
+ "sha256": "bbcd0d46cb2e1815f86cdb3d710fb89b2539a18d8ff03ce9306e88ca72d70309"
1101
+ },
1102
+ "src/fastplms/registry.py": {
1103
+ "size": 68948,
1104
+ "sha256": "c370419b34fc86a32c757b26601847be413a6b24384d435934d0431b99823d92"
1105
+ },
1106
+ "src/fastplms/runtime.py": {
1107
+ "size": 2541,
1108
+ "sha256": "9521c37fcd168bf9a4137277fb73672403ccf30d70d4845aa879fb22f42ddeb6"
1109
+ },
1110
+ "tools/confidence/__init__.py": {
1111
+ "size": 58,
1112
+ "sha256": "906ebf189faecc0e4db0667e06235ddedb5f55ccb8764007cefb94bebab4d1e2"
1113
+ },
1114
+ "tools/confidence/acceptance.py": {
1115
+ "size": 11760,
1116
+ "sha256": "8039c46a56731d560a50d6ea256f4b3241cd899049b40aaa23d01e5aa73246c6"
1117
+ },
1118
+ "tools/confidence/artifact_validation.py": {
1119
+ "size": 4870,
1120
+ "sha256": "39a762846cce12596318a84db9858ba4699763639a0c2d78a9e0a1c912b310ba"
1121
+ },
1122
+ "tools/confidence/budget.py": {
1123
+ "size": 534,
1124
+ "sha256": "5ff3392d24db6569c8104ac614f3318a1cdba57c09cc9b3207ebd7e936f974d2"
1125
+ },
1126
+ "tools/confidence/cache.py": {
1127
+ "size": 24237,
1128
+ "sha256": "0fb7cc37ffc340fd16c61f44cba3f7462593638aef3937f12fe8c4ff791001cf"
1129
+ },
1130
+ "tools/confidence/call_status.py": {
1131
+ "size": 703,
1132
+ "sha256": "8a1063424e355915c4d254a92df1b6e1dc8258a454316ee21bd4b0a5647e507a"
1133
+ },
1134
+ "tools/confidence/campaign.py": {
1135
+ "size": 6460,
1136
+ "sha256": "a4e91bfa6da4db22526a2ea21a671117d033c014158410c4678fa21593d8a821"
1137
+ },
1138
+ "tools/confidence/config.py": {
1139
+ "size": 1708,
1140
+ "sha256": "342e6fdf9cd8a7cd7f3f455e519b3ebd63132001b1c95e8ad4b8c5cf05077d9f"
1141
+ },
1142
+ "tools/confidence/data.py": {
1143
+ "size": 33870,
1144
+ "sha256": "acdbad582e458d05946b6403e2f42db59fe48a5b970dd01123be2951aea2bdaa"
1145
+ },
1146
+ "tools/confidence/evaluation.py": {
1147
+ "size": 15661,
1148
+ "sha256": "ef00a4ce9a27f2561689496e114cbc6d160bc186e6c1214cbb7ff1be23733992"
1149
+ },
1150
+ "tools/confidence/experiment_artifacts.py": {
1151
+ "size": 27221,
1152
+ "sha256": "1576e4b8bceadb7692482347e7119276248f333539101f9b71116f81c531bd94"
1153
+ },
1154
+ "tools/confidence/gpu_benchmark.py": {
1155
+ "size": 5686,
1156
+ "sha256": "cb95a65622fd21bb4f31a981e914ff1f2c38a956f5c1e564c3038c7db25bed82"
1157
+ },
1158
+ "tools/confidence/host.py": {
1159
+ "size": 30130,
1160
+ "sha256": "7c558dc2017aa455e604dbea9f959983fb2115052e1ead12791993979922516b"
1161
+ },
1162
+ "tools/confidence/labels.py": {
1163
+ "size": 11283,
1164
+ "sha256": "6eb50c11860f6b379f257586b7918dcfe4ef60b1fb84268c1909ea95bafcf7dd"
1165
+ },
1166
+ "tools/confidence/launch.py": {
1167
+ "size": 9672,
1168
+ "sha256": "472445e07620269e367350ab897f33ca174d1e03cafbcc026c8e4496a9d0ebcc"
1169
+ },
1170
+ "tools/confidence/launch_v2.py": {
1171
+ "size": 1197,
1172
+ "sha256": "458d229e06b9b378312e75ecf027a4f053908a9b59c60638a04092bb8f8dd52a"
1173
+ },
1174
+ "tools/confidence/live_binding.py": {
1175
+ "size": 5275,
1176
+ "sha256": "5d3222fa93d99828e7cdfe2d881989df48c4fe6308f1ec33058e215a5853e13f"
1177
+ },
1178
+ "tools/confidence/live_checkpoints.py": {
1179
+ "size": 12365,
1180
+ "sha256": "2338b1362cb7a31f5c54ec60e9a67c253d4dbcc0ad14bc6a405224e4ead92528"
1181
+ },
1182
+ "tools/confidence/metrics.py": {
1183
+ "size": 15585,
1184
+ "sha256": "cb9fca1f26616bc8ac0330976f8d52cede3b5ef61769221821e4de202e93b36a"
1185
+ },
1186
+ "tools/confidence/migration.py": {
1187
+ "size": 9152,
1188
+ "sha256": "ce4d841e236c0e984fa06edb25d22fbf3c782b9d779b98127032da7425e85982"
1189
+ },
1190
+ "tools/confidence/modal_app.py": {
1191
+ "size": 11493,
1192
+ "sha256": "bd8f8e2c5089407335a4da73dc8f570f823034837396a80784a5b4787564fd2f"
1193
+ },
1194
+ "tools/confidence/modal_gpu_benchmark.py": {
1195
+ "size": 3916,
1196
+ "sha256": "a359c911c70d10c82c41e186ec53f1ae66063fb7cc74a5beaf09b97b6f525c0b"
1197
+ },
1198
+ "tools/confidence/modal_live.py": {
1199
+ "size": 7140,
1200
+ "sha256": "d7ced062558e73dabf9bc1f1bdf7f7bb0c417693964790be076e3634151bebdf"
1201
+ },
1202
+ "tools/confidence/modal_resume.py": {
1203
+ "size": 4021,
1204
+ "sha256": "3a0f6615180d1040e146a5d1e1702ee1bb3446cb65cb86e00113e3a80de97eaa"
1205
+ },
1206
+ "tools/confidence/modal_v2.py": {
1207
+ "size": 18832,
1208
+ "sha256": "3ee2a5eb84c157138c7199e9b60fe862fe6e55201d63aa0cd165153b0d180b08"
1209
+ },
1210
+ "tools/confidence/online_smoke.py": {
1211
+ "size": 17889,
1212
+ "sha256": "a95b72b4ba244a9289dbcfecfc3201d4c033b3e41c2d6fe18a3b0ffd5a9b8f0a"
1213
+ },
1214
+ "tools/confidence/online_training.py": {
1215
+ "size": 32956,
1216
+ "sha256": "9326012b780bd739841f930c7fb08431e1b615b334581376a006c9b7fa9d44a4"
1217
+ },
1218
+ "tools/confidence/packaging.py": {
1219
+ "size": 8909,
1220
+ "sha256": "efd50d289d0a35e6634428ad37ed0812c5a00607924fb3159796b95e5a70a9bb"
1221
+ },
1222
+ "tools/confidence/ranking.py": {
1223
+ "size": 3677,
1224
+ "sha256": "32db0f3f46d8dc7770ad8a280169ed8fb2888024dd0d66964c3d7f0ab97de578"
1225
+ },
1226
+ "tools/confidence/recompute.py": {
1227
+ "size": 10462,
1228
+ "sha256": "e19c11e77632e70ca0d4dd9eb66dff0a0e04e4a5bb4db36148e6532edc10e225"
1229
+ },
1230
+ "tools/confidence/release.py": {
1231
+ "size": 8949,
1232
+ "sha256": "3ea71eac204b6c8f3c8783894544a06cd8101b0d23c1c3e5e4b4735fcce25201"
1233
+ },
1234
+ "tools/confidence/rollouts.py": {
1235
+ "size": 21348,
1236
+ "sha256": "1dad3e3e0dca8d8aa56070efd7b23dd4ffefd4109aab33c2f05843e87f940f1d"
1237
+ },
1238
+ "tools/confidence/selection.py": {
1239
+ "size": 1003,
1240
+ "sha256": "dd0e9c87dd48f63159b997e801bb0595f1ebf5c9eaed1f5b2bab1a3543054cf1"
1241
+ },
1242
+ "tools/confidence/splits.py": {
1243
+ "size": 5417,
1244
+ "sha256": "3ea939c6b6621c3e6e3eea14a1a08c682936fbebcb4c84a31ede7318f30fdbf4"
1245
+ },
1246
+ "tools/confidence/ssh.py": {
1247
+ "size": 7530,
1248
+ "sha256": "e80d0904563e71c343742e31093ba812c173039ac255317caf471c1c069cf538"
1249
+ },
1250
+ "tools/confidence/structure_metrics.py": {
1251
+ "size": 13711,
1252
+ "sha256": "a0b8825b367d0112b5a5e8acd06e66441067b049bfe1932df9390ec92c26d71b"
1253
+ },
1254
+ "tools/confidence/target_pool.py": {
1255
+ "size": 11433,
1256
+ "sha256": "fee32a81939c31276fce9a6e2dedd68ade5b135eb3a3e345f02ec6f4d523377c"
1257
+ },
1258
+ "tools/confidence/target_splits.py": {
1259
+ "size": 8602,
1260
+ "sha256": "15dcec9e83cda07562231bcc13212d7bce47303c8e7c94d9297e2a814bd62946"
1261
+ },
1262
+ "tools/confidence/test_evaluation.py": {
1263
+ "size": 21444,
1264
+ "sha256": "8df70e74dc300175ae3ac17ac0dc5c9813908a1ee86c4d66f639287cb0ea6c38"
1265
+ },
1266
+ "tools/confidence/training.py": {
1267
+ "size": 37010,
1268
+ "sha256": "e87056dfcf26cd98b4c42b191154f8bafe63622d3574db2220d0cc1c32399069"
1269
+ },
1270
+ "tools/confidence/v2_analysis.py": {
1271
+ "size": 9958,
1272
+ "sha256": "d6c41100acacfad1922ad43aa9b453ffcead3c36876230b80ebe0ddbffa4121e"
1273
+ },
1274
+ "tools/confidence/v2_campaign.py": {
1275
+ "size": 10084,
1276
+ "sha256": "c746a5160bffb0679527843682db07cba041842ad9cde9af93a45d6d166b1737"
1277
+ },
1278
+ "tools/confidence/v2_records.py": {
1279
+ "size": 2110,
1280
+ "sha256": "57a5be646cc29637b36732bf3927115a8f879cf0d91d82b26d5b850628ae86da"
1281
+ },
1282
+ "tools/confidence/workflow.py": {
1283
+ "size": 12886,
1284
+ "sha256": "abe8624dd5b980dcac43864e19649a4058bfed8fb8207d9014b0f50decadb1db"
1285
+ },
1286
+ "tools/execution/__init__.py": {
1287
+ "size": 77,
1288
+ "sha256": "1aa67ededb225e478f19423c2e70deacfd00a4734d6116c8ccc6eafb4a6fd4f8"
1289
+ },
1290
+ "tools/execution/budget.py": {
1291
+ "size": 5146,
1292
+ "sha256": "7bde890c6dad647d23208460085f92b93d6f9e497a85b5cb0b6e1a5c33514534"
1293
+ },
1294
+ "tools/execution/pricing.py": {
1295
+ "size": 611,
1296
+ "sha256": "a1758c1a0df12cb08612c40167a9df87975abb2c170d227ccf775009dbfb3d80"
1297
+ },
1298
+ "tools/execution/source.py": {
1299
+ "size": 6786,
1300
+ "sha256": "2dd3694f5975f571db741084ac1d56b6dd693818ef323f013dae21e8bbde7339"
1301
+ }
1302
+ },
1303
+ "environment": {
1304
+ "python": "3.12.10",
1305
+ "platform": "Linux-4.19.0-gvisor-x86_64-with-glibc2.36",
1306
+ "packages": {
1307
+ "torch": "2.13.0+cu130",
1308
+ "transformers": "5.13.0",
1309
+ "numpy": "1.26.4",
1310
+ "scipy": "1.16.3",
1311
+ "safetensors": "0.8.0",
1312
+ "DockQ": "2.1.3",
1313
+ "tmtools": "0.2.0"
1314
+ }
1315
+ }
1316
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/skipped.json ADDED
@@ -0,0 +1 @@
 
 
1
+ []
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/summary.json ADDED
@@ -0,0 +1,830 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "run": "v2",
3
+ "head_files": {
4
+ "v2": "/experiment/v2-reproduction-20260922/runs/esmfold2_300/v2/final-ema.safetensors",
5
+ "pilot": "/experiment/v2-reproduction-20260922/pilot/esmfold2_300-head.safetensors",
6
+ "donor": "None"
7
+ },
8
+ "v2": {
9
+ "overall": {
10
+ "targets": 512.0,
11
+ "plddt_lddt_spearman": 0.8800288312908452,
12
+ "ptm_tm_spearman": 0.8400409079208879,
13
+ "iptm_dockq_spearman": 0.8140342354892182,
14
+ "atom_plddt_mae": 0.07867444160995297,
15
+ "calibration_error_10bin": 0.004262167109791515,
16
+ "plddt_ce": 2.727218296658248,
17
+ "pae_ce": 2.8167713874951006,
18
+ "within_target_plddt_accuracy": 0.5850515463917526,
19
+ "within_target_plddt_pairs": 388.0,
20
+ "within_target_iptm_dockq_accuracy": 0.5717344753747323,
21
+ "within_target_iptm_dockq_pairs": 467.0,
22
+ "top1_regret": 0.02312038756347413,
23
+ "random_selection_regret": 0.0255562292536598,
24
+ "complexes_without_dockq": 3.0,
25
+ "disorder_auroc": 0.8559082963302653,
26
+ "resolved_residue_mean_plddt": 0.7554963556571228,
27
+ "unresolved_residue_mean_plddt": 0.49950007234925414,
28
+ "resolved_fraction_below_50": 0.11332494518951174,
29
+ "unresolved_fraction_below_50": 0.5693434667155023,
30
+ "unresolved_residues": 109210.0
31
+ },
32
+ "interval_95": {
33
+ "targets": [
34
+ 512.0,
35
+ 512.0
36
+ ],
37
+ "plddt_lddt_spearman": [
38
+ 0.850896517064548,
39
+ 0.9025845667577526
40
+ ],
41
+ "ptm_tm_spearman": [
42
+ 0.8062101295192408,
43
+ 0.8669303839362984
44
+ ],
45
+ "iptm_dockq_spearman": [
46
+ 0.765440274470003,
47
+ 0.8511892541683722
48
+ ],
49
+ "atom_plddt_mae": [
50
+ 0.07617256910243451,
51
+ 0.08124085280974105
52
+ ],
53
+ "calibration_error_10bin": [
54
+ 0.002405903511494829,
55
+ 0.008305434046505753
56
+ ],
57
+ "plddt_ce": [
58
+ 2.6838767697592263,
59
+ 2.7728451973525807
60
+ ],
61
+ "pae_ce": [
62
+ 2.765116091344971,
63
+ 2.8657475843327123
64
+ ],
65
+ "within_target_plddt_accuracy": [
66
+ 0.50357217959733,
67
+ 0.6620079010649261
68
+ ],
69
+ "within_target_plddt_pairs": [
70
+ 308.0,
71
+ 467.0
72
+ ],
73
+ "within_target_iptm_dockq_accuracy": [
74
+ 0.5056676603225561,
75
+ 0.6347500084180349
76
+ ],
77
+ "within_target_iptm_dockq_pairs": [
78
+ 382.0,
79
+ 558.0
80
+ ],
81
+ "top1_regret": [
82
+ 0.018136442330493864,
83
+ 0.028989086775688223
84
+ ],
85
+ "random_selection_regret": [
86
+ 0.02126741170997403,
87
+ 0.0303221677611513
88
+ ],
89
+ "complexes_without_dockq": [
90
+ 0.0,
91
+ 7.0
92
+ ],
93
+ "disorder_auroc": [
94
+ 0.8331880162913483,
95
+ 0.8778565551688383
96
+ ],
97
+ "resolved_residue_mean_plddt": [
98
+ 0.7422586220612238,
99
+ 0.7684824631161622
100
+ ],
101
+ "unresolved_residue_mean_plddt": [
102
+ 0.48104098429288983,
103
+ 0.5186195043950589
104
+ ],
105
+ "resolved_fraction_below_50": [
106
+ 0.08915901254361802,
107
+ 0.13865388611824112
108
+ ],
109
+ "unresolved_fraction_below_50": [
110
+ 0.5248366023832248,
111
+ 0.6152283122099464
112
+ ],
113
+ "unresolved_residues": [
114
+ 95344.0,
115
+ 123023.125
116
+ ]
117
+ },
118
+ "by_stratum": {
119
+ "complex": {
120
+ "targets": 128.0,
121
+ "plddt_lddt_spearman": 0.8106580460401517,
122
+ "ptm_tm_spearman": 0.8508016376993109,
123
+ "iptm_dockq_spearman": 0.8287937714691689,
124
+ "atom_plddt_mae": 0.09153698587788495,
125
+ "calibration_error_10bin": 0.012036195442723153,
126
+ "plddt_ce": 3.022351574525237,
127
+ "pae_ce": 2.80145557988435,
128
+ "within_target_plddt_accuracy": 0.5879396984924623,
129
+ "within_target_plddt_pairs": 199.0,
130
+ "within_target_iptm_dockq_accuracy": 0.6137566137566137,
131
+ "within_target_iptm_dockq_pairs": 189.0,
132
+ "top1_regret": 0.03537037792505793,
133
+ "random_selection_regret": 0.04065019038261136,
134
+ "complexes_without_dockq": 0.0,
135
+ "disorder_auroc": 0.8407365743212382,
136
+ "resolved_residue_mean_plddt": 0.7013273303295886,
137
+ "unresolved_residue_mean_plddt": 0.46187180459293276,
138
+ "resolved_fraction_below_50": 0.16632725666756631,
139
+ "unresolved_fraction_below_50": 0.6521705724164426,
140
+ "unresolved_residues": 39045.0
141
+ },
142
+ "dimer_hetero": {
143
+ "targets": 96.0,
144
+ "plddt_lddt_spearman": 0.8311580128385974,
145
+ "ptm_tm_spearman": 0.8190906861574919,
146
+ "iptm_dockq_spearman": 0.8009212451285864,
147
+ "atom_plddt_mae": 0.0700571411579576,
148
+ "calibration_error_10bin": 0.008337182084185631,
149
+ "plddt_ce": 2.5049071460962296,
150
+ "pae_ce": 2.7173720677693685,
151
+ "within_target_plddt_accuracy": 0.6428571428571429,
152
+ "within_target_plddt_pairs": 28.0,
153
+ "within_target_iptm_dockq_accuracy": 0.6106870229007634,
154
+ "within_target_iptm_dockq_pairs": 131.0,
155
+ "top1_regret": 0.025654130772714372,
156
+ "random_selection_regret": 0.027301535718445975,
157
+ "complexes_without_dockq": 2.0,
158
+ "disorder_auroc": 0.8841264900732428,
159
+ "resolved_residue_mean_plddt": 0.7857015509249655,
160
+ "unresolved_residue_mean_plddt": 0.5056767187021983,
161
+ "resolved_fraction_below_50": 0.07792072231935493,
162
+ "unresolved_fraction_below_50": 0.5700787401574803,
163
+ "unresolved_residues": 22225.0
164
+ },
165
+ "dimer_homo": {
166
+ "targets": 96.0,
167
+ "plddt_lddt_spearman": 0.78387297687924,
168
+ "ptm_tm_spearman": 0.8101519537845215,
169
+ "iptm_dockq_spearman": 0.716641790626977,
170
+ "atom_plddt_mae": 0.07669757784377218,
171
+ "calibration_error_10bin": 0.005050622037691162,
172
+ "plddt_ce": 2.7722646596531075,
173
+ "pae_ce": 2.8953870450456938,
174
+ "within_target_plddt_accuracy": 0.5974025974025974,
175
+ "within_target_plddt_pairs": 77.0,
176
+ "within_target_iptm_dockq_accuracy": 0.48299319727891155,
177
+ "within_target_iptm_dockq_pairs": 147.0,
178
+ "top1_regret": 0.04097269304100556,
179
+ "random_selection_regret": 0.04208677173954537,
180
+ "complexes_without_dockq": 1.0,
181
+ "disorder_auroc": 0.8693362517200035,
182
+ "resolved_residue_mean_plddt": 0.7669897235632563,
183
+ "unresolved_residue_mean_plddt": 0.48767919112389024,
184
+ "resolved_fraction_below_50": 0.09681306802258077,
185
+ "unresolved_fraction_below_50": 0.616578947368421,
186
+ "unresolved_residues": 15200.0
187
+ },
188
+ "long": {
189
+ "targets": 64.0,
190
+ "plddt_lddt_spearman": 0.9221581753728064,
191
+ "ptm_tm_spearman": 0.6471742888114141,
192
+ "iptm_dockq_spearman": 0.5107133290694306,
193
+ "atom_plddt_mae": 0.09080562137454576,
194
+ "calibration_error_10bin": 0.01900494880431404,
195
+ "plddt_ce": 3.1715988390147687,
196
+ "pae_ce": 2.4108374193310738,
197
+ "within_target_plddt_accuracy": 0.6,
198
+ "within_target_plddt_pairs": 80.0,
199
+ "within_target_iptm_dockq_accuracy": 0.5053763440860215,
200
+ "within_target_iptm_dockq_pairs": 93.0,
201
+ "top1_regret": 0.03345932052961278,
202
+ "random_selection_regret": 0.027588367028846116,
203
+ "complexes_without_dockq": 0.0,
204
+ "disorder_auroc": 0.8514337159299303,
205
+ "resolved_residue_mean_plddt": 0.5770299948737302,
206
+ "unresolved_residue_mean_plddt": 0.3741640027087973,
207
+ "resolved_fraction_below_50": 0.31985226652419835,
208
+ "unresolved_fraction_below_50": 0.8748981439565414,
209
+ "unresolved_residues": 44180.0
210
+ },
211
+ "monomer_long": {
212
+ "targets": 64.0,
213
+ "plddt_lddt_spearman": 0.9368283625816658,
214
+ "ptm_tm_spearman": 0.8433674889403217,
215
+ "iptm_dockq_spearman": NaN,
216
+ "atom_plddt_mae": 0.0759736638839806,
217
+ "calibration_error_10bin": 0.0024154361016370143,
218
+ "plddt_ce": 2.815270305424929,
219
+ "pae_ce": 3.0618852213025094,
220
+ "within_target_plddt_accuracy": 0.65,
221
+ "within_target_plddt_pairs": 20.0,
222
+ "within_target_iptm_dockq_accuracy": NaN,
223
+ "within_target_iptm_dockq_pairs": 0.0,
224
+ "top1_regret": 0.004566343035548925,
225
+ "random_selection_regret": 0.006965015921741718,
226
+ "complexes_without_dockq": 0.0,
227
+ "disorder_auroc": 0.8333355798468287,
228
+ "resolved_residue_mean_plddt": 0.7420415980469014,
229
+ "unresolved_residue_mean_plddt": 0.5202901368977157,
230
+ "resolved_fraction_below_50": 0.12108768327673801,
231
+ "unresolved_fraction_below_50": 0.5353085210577865,
232
+ "unresolved_residues": 20420.0
233
+ },
234
+ "monomer_medium": {
235
+ "targets": 64.0,
236
+ "plddt_lddt_spearman": 0.7019265357138407,
237
+ "ptm_tm_spearman": 0.5614456684147306,
238
+ "iptm_dockq_spearman": NaN,
239
+ "atom_plddt_mae": 0.058679424996436955,
240
+ "calibration_error_10bin": 0.004963209992220558,
241
+ "plddt_ce": 2.406311320140958,
242
+ "pae_ce": 2.86192724481225,
243
+ "within_target_plddt_accuracy": 0.6666666666666666,
244
+ "within_target_plddt_pairs": 3.0,
245
+ "within_target_iptm_dockq_accuracy": NaN,
246
+ "within_target_iptm_dockq_pairs": 0.0,
247
+ "top1_regret": 0.002645190805196762,
248
+ "random_selection_regret": 0.004238354042172433,
249
+ "complexes_without_dockq": 0.0,
250
+ "disorder_auroc": 0.9268911635417542,
251
+ "resolved_residue_mean_plddt": 0.861646196945698,
252
+ "unresolved_residue_mean_plddt": 0.5804690326922892,
253
+ "resolved_fraction_below_50": 0.032663033264423984,
254
+ "unresolved_fraction_below_50": 0.3437352245862884,
255
+ "unresolved_residues": 8460.0
256
+ },
257
+ "monomer_short": {
258
+ "targets": 64.0,
259
+ "plddt_lddt_spearman": 0.8250812996220667,
260
+ "ptm_tm_spearman": 0.812712295717518,
261
+ "iptm_dockq_spearman": NaN,
262
+ "atom_plddt_mae": 0.06846041204306291,
263
+ "calibration_error_10bin": 0.003418022451800112,
264
+ "plddt_ce": 2.635703890025616,
265
+ "pae_ce": 2.5883088048547505,
266
+ "within_target_plddt_accuracy": 0.5081967213114754,
267
+ "within_target_plddt_pairs": 61.0,
268
+ "within_target_iptm_dockq_accuracy": NaN,
269
+ "within_target_iptm_dockq_pairs": 0.0,
270
+ "top1_regret": 0.007428696844726801,
271
+ "random_selection_regret": 0.008176452666521072,
272
+ "complexes_without_dockq": 0.0,
273
+ "disorder_auroc": 0.9210213900512092,
274
+ "resolved_residue_mean_plddt": 0.8646206130536582,
275
+ "unresolved_residue_mean_plddt": 0.6036624094982839,
276
+ "resolved_fraction_below_50": 0.029714285714285714,
277
+ "unresolved_fraction_below_50": 0.21580310880829015,
278
+ "unresolved_residues": 3860.0
279
+ }
280
+ }
281
+ },
282
+ "pilot": {
283
+ "overall": {
284
+ "targets": 512.0,
285
+ "plddt_lddt_spearman": 0.8214493777932794,
286
+ "ptm_tm_spearman": 0.791499712622986,
287
+ "iptm_dockq_spearman": 0.7291387617226682,
288
+ "atom_plddt_mae": 0.09237427642472307,
289
+ "calibration_error_10bin": 0.022339639977683973,
290
+ "plddt_ce": 2.971393042244017,
291
+ "pae_ce": 2.95876080468297,
292
+ "within_target_plddt_accuracy": 0.44587628865979384,
293
+ "within_target_plddt_pairs": 388.0,
294
+ "within_target_iptm_dockq_accuracy": 0.5653104925053534,
295
+ "within_target_iptm_dockq_pairs": 467.0,
296
+ "top1_regret": 0.026815529381616007,
297
+ "random_selection_regret": 0.0255562292536598,
298
+ "complexes_without_dockq": 3.0,
299
+ "disorder_auroc": 0.8500627856448705,
300
+ "resolved_residue_mean_plddt": 0.7645661993436919,
301
+ "unresolved_residue_mean_plddt": 0.4940377889156189,
302
+ "resolved_fraction_below_50": 0.12498895374036871,
303
+ "unresolved_fraction_below_50": 0.5817507554253274,
304
+ "unresolved_residues": 109210.0
305
+ },
306
+ "interval_95": {
307
+ "targets": [
308
+ 512.0,
309
+ 512.0
310
+ ],
311
+ "plddt_lddt_spearman": [
312
+ 0.7836194064424462,
313
+ 0.8567970498986951
314
+ ],
315
+ "ptm_tm_spearman": [
316
+ 0.7488274842639989,
317
+ 0.8263336982206235
318
+ ],
319
+ "iptm_dockq_spearman": [
320
+ 0.6667649542669793,
321
+ 0.777938634469494
322
+ ],
323
+ "atom_plddt_mae": [
324
+ 0.08882675260519157,
325
+ 0.09611726998636413
326
+ ],
327
+ "calibration_error_10bin": [
328
+ 0.01864223001330818,
329
+ 0.02742797734568785
330
+ ],
331
+ "plddt_ce": [
332
+ 2.915060995918466,
333
+ 3.0237603725388182
334
+ ],
335
+ "pae_ce": [
336
+ 2.9092683732684237,
337
+ 3.0072952268854714
338
+ ],
339
+ "within_target_plddt_accuracy": [
340
+ 0.36336037134283566,
341
+ 0.5333423180592992
342
+ ],
343
+ "within_target_plddt_pairs": [
344
+ 309.0,
345
+ 466.025
346
+ ],
347
+ "within_target_iptm_dockq_accuracy": [
348
+ 0.5023455505761845,
349
+ 0.6341710613052076
350
+ ],
351
+ "within_target_iptm_dockq_pairs": [
352
+ 384.95,
353
+ 557.0
354
+ ],
355
+ "top1_regret": [
356
+ 0.020859933135556903,
357
+ 0.03355560102652047
358
+ ],
359
+ "random_selection_regret": [
360
+ 0.021359358666483322,
361
+ 0.03047753768166427
362
+ ],
363
+ "complexes_without_dockq": [
364
+ 0.0,
365
+ 7.0
366
+ ],
367
+ "disorder_auroc": [
368
+ 0.8295675472699018,
369
+ 0.8704054966839871
370
+ ],
371
+ "resolved_residue_mean_plddt": [
372
+ 0.7519603024424024,
373
+ 0.776265789221005
374
+ ],
375
+ "unresolved_residue_mean_plddt": [
376
+ 0.475978931654772,
377
+ 0.5117572956281924
378
+ ],
379
+ "resolved_fraction_below_50": [
380
+ 0.10559592457622158,
381
+ 0.14603150761586764
382
+ ],
383
+ "unresolved_fraction_below_50": [
384
+ 0.5369710541695654,
385
+ 0.6241709562199569
386
+ ],
387
+ "unresolved_residues": [
388
+ 95836.875,
389
+ 124426.25
390
+ ]
391
+ },
392
+ "by_stratum": {
393
+ "complex": {
394
+ "targets": 128.0,
395
+ "plddt_lddt_spearman": 0.6737795075183292,
396
+ "ptm_tm_spearman": 0.6804738597994625,
397
+ "iptm_dockq_spearman": 0.608628042304791,
398
+ "atom_plddt_mae": 0.1179626099219429,
399
+ "calibration_error_10bin": 0.021876819463024815,
400
+ "plddt_ce": 3.4278854701668022,
401
+ "pae_ce": 3.029936113767326,
402
+ "within_target_plddt_accuracy": 0.5125628140703518,
403
+ "within_target_plddt_pairs": 199.0,
404
+ "within_target_iptm_dockq_accuracy": 0.5343915343915344,
405
+ "within_target_iptm_dockq_pairs": 189.0,
406
+ "top1_regret": 0.04000030376972423,
407
+ "random_selection_regret": 0.04065019038261136,
408
+ "complexes_without_dockq": 0.0,
409
+ "disorder_auroc": 0.8201884052338687,
410
+ "resolved_residue_mean_plddt": 0.6842502815816957,
411
+ "unresolved_residue_mean_plddt": 0.460967615012827,
412
+ "resolved_fraction_below_50": 0.19020781706209977,
413
+ "unresolved_fraction_below_50": 0.6524779101037265,
414
+ "unresolved_residues": 39045.0
415
+ },
416
+ "dimer_hetero": {
417
+ "targets": 96.0,
418
+ "plddt_lddt_spearman": 0.7898141919018745,
419
+ "ptm_tm_spearman": 0.8399649087018606,
420
+ "iptm_dockq_spearman": 0.7758740805102708,
421
+ "atom_plddt_mae": 0.07685355959818348,
422
+ "calibration_error_10bin": 0.018358362672347604,
423
+ "plddt_ce": 2.6711105021337667,
424
+ "pae_ce": 2.8360755898058416,
425
+ "within_target_plddt_accuracy": 0.2857142857142857,
426
+ "within_target_plddt_pairs": 28.0,
427
+ "within_target_iptm_dockq_accuracy": 0.549618320610687,
428
+ "within_target_iptm_dockq_pairs": 131.0,
429
+ "top1_regret": 0.02642515831026123,
430
+ "random_selection_regret": 0.027301535718445975,
431
+ "complexes_without_dockq": 2.0,
432
+ "disorder_auroc": 0.8880404079340556,
433
+ "resolved_residue_mean_plddt": 0.8058033073220029,
434
+ "unresolved_residue_mean_plddt": 0.4937977678247458,
435
+ "resolved_fraction_below_50": 0.08973147882362151,
436
+ "unresolved_fraction_below_50": 0.5971203599550057,
437
+ "unresolved_residues": 22225.0
438
+ },
439
+ "dimer_homo": {
440
+ "targets": 96.0,
441
+ "plddt_lddt_spearman": 0.7080712890483275,
442
+ "ptm_tm_spearman": 0.8003451837992243,
443
+ "iptm_dockq_spearman": 0.7028453859891726,
444
+ "atom_plddt_mae": 0.08571902842789549,
445
+ "calibration_error_10bin": 0.031866758665723686,
446
+ "plddt_ce": 3.0696248106658457,
447
+ "pae_ce": 2.9905925050377844,
448
+ "within_target_plddt_accuracy": 0.4155844155844156,
449
+ "within_target_plddt_pairs": 77.0,
450
+ "within_target_iptm_dockq_accuracy": 0.6190476190476191,
451
+ "within_target_iptm_dockq_pairs": 147.0,
452
+ "top1_regret": 0.04969415040012341,
453
+ "random_selection_regret": 0.04208677173954537,
454
+ "complexes_without_dockq": 1.0,
455
+ "disorder_auroc": 0.8738105538674528,
456
+ "resolved_residue_mean_plddt": 0.7931956405630485,
457
+ "unresolved_residue_mean_plddt": 0.4855950120130652,
458
+ "resolved_fraction_below_50": 0.10112103134884093,
459
+ "unresolved_fraction_below_50": 0.6253947368421052,
460
+ "unresolved_residues": 15200.0
461
+ },
462
+ "long": {
463
+ "targets": 64.0,
464
+ "plddt_lddt_spearman": 0.23702868192072188,
465
+ "ptm_tm_spearman": 0.19273393783142415,
466
+ "iptm_dockq_spearman": -0.061174431889619574,
467
+ "atom_plddt_mae": 0.15201843309719518,
468
+ "calibration_error_10bin": 0.07588314114551799,
469
+ "plddt_ce": 3.8521644935011863,
470
+ "pae_ce": 2.831214813143015,
471
+ "within_target_plddt_accuracy": 0.3875,
472
+ "within_target_plddt_pairs": 80.0,
473
+ "within_target_iptm_dockq_accuracy": 0.44086021505376344,
474
+ "within_target_iptm_dockq_pairs": 93.0,
475
+ "top1_regret": 0.03480256857014462,
476
+ "random_selection_regret": 0.027588367028846116,
477
+ "complexes_without_dockq": 0.0,
478
+ "disorder_auroc": 0.6221295835784759,
479
+ "resolved_residue_mean_plddt": 0.6005649897120733,
480
+ "unresolved_residue_mean_plddt": 0.5326154574434808,
481
+ "resolved_fraction_below_50": 0.29486300972114143,
482
+ "unresolved_fraction_below_50": 0.4459710276143051,
483
+ "unresolved_residues": 44180.0
484
+ },
485
+ "monomer_long": {
486
+ "targets": 64.0,
487
+ "plddt_lddt_spearman": 0.8954647994609323,
488
+ "ptm_tm_spearman": 0.8368550962411742,
489
+ "iptm_dockq_spearman": NaN,
490
+ "atom_plddt_mae": 0.08645276377000244,
491
+ "calibration_error_10bin": 0.038736274876775216,
492
+ "plddt_ce": 3.1537353068590166,
493
+ "pae_ce": 3.243742460012436,
494
+ "within_target_plddt_accuracy": 0.2,
495
+ "within_target_plddt_pairs": 20.0,
496
+ "within_target_iptm_dockq_accuracy": NaN,
497
+ "within_target_iptm_dockq_pairs": 0.0,
498
+ "top1_regret": 0.007963559590280056,
499
+ "random_selection_regret": 0.006965015921741718,
500
+ "complexes_without_dockq": 0.0,
501
+ "disorder_auroc": 0.8433937333114805,
502
+ "resolved_residue_mean_plddt": 0.7746452986655895,
503
+ "unresolved_residue_mean_plddt": 0.5179795594059522,
504
+ "resolved_fraction_below_50": 0.11951880807602201,
505
+ "unresolved_fraction_below_50": 0.5056807051909892,
506
+ "unresolved_residues": 20420.0
507
+ },
508
+ "monomer_medium": {
509
+ "targets": 64.0,
510
+ "plddt_lddt_spearman": 0.6693555356985909,
511
+ "ptm_tm_spearman": 0.6061454457563062,
512
+ "iptm_dockq_spearman": NaN,
513
+ "atom_plddt_mae": 0.05797116760131328,
514
+ "calibration_error_10bin": 0.008507350664438,
515
+ "plddt_ce": 2.4637596353888513,
516
+ "pae_ce": 2.9427529819309712,
517
+ "within_target_plddt_accuracy": 0.6666666666666666,
518
+ "within_target_plddt_pairs": 3.0,
519
+ "within_target_iptm_dockq_accuracy": NaN,
520
+ "within_target_iptm_dockq_pairs": 0.0,
521
+ "top1_regret": 0.0039059631526470184,
522
+ "random_selection_regret": 0.004238354042172433,
523
+ "complexes_without_dockq": 0.0,
524
+ "disorder_auroc": 0.9250798211111422,
525
+ "resolved_residue_mean_plddt": 0.8711971803079801,
526
+ "unresolved_residue_mean_plddt": 0.5544631465670629,
527
+ "resolved_fraction_below_50": 0.040941552339785754,
528
+ "unresolved_fraction_below_50": 0.46323877068557917,
529
+ "unresolved_residues": 8460.0
530
+ },
531
+ "monomer_short": {
532
+ "targets": 64.0,
533
+ "plddt_lddt_spearman": 0.8181924384027187,
534
+ "ptm_tm_spearman": 0.841278235139015,
535
+ "iptm_dockq_spearman": NaN,
536
+ "atom_plddt_mae": 0.06968963842139421,
537
+ "calibration_error_10bin": 0.011880652376832432,
538
+ "plddt_ce": 2.6867754861712454,
539
+ "pae_ce": 2.6837166257202627,
540
+ "within_target_plddt_accuracy": 0.4098360655737705,
541
+ "within_target_plddt_pairs": 61.0,
542
+ "within_target_iptm_dockq_accuracy": NaN,
543
+ "within_target_iptm_dockq_pairs": 0.0,
544
+ "top1_regret": 0.008820421062409878,
545
+ "random_selection_regret": 0.008176452666521072,
546
+ "complexes_without_dockq": 0.0,
547
+ "disorder_auroc": 0.9162152902611822,
548
+ "resolved_residue_mean_plddt": 0.8676613242369003,
549
+ "unresolved_residue_mean_plddt": 0.6040896382819804,
550
+ "resolved_fraction_below_50": 0.03447230320699708,
551
+ "unresolved_fraction_below_50": 0.26813471502590674,
552
+ "unresolved_residues": 3860.0
553
+ }
554
+ }
555
+ },
556
+ "donor": {
557
+ "overall": {
558
+ "targets": 512.0,
559
+ "plddt_lddt_spearman": -0.4609255059571309,
560
+ "ptm_tm_spearman": -0.03356698476859813,
561
+ "iptm_dockq_spearman": -0.16682951858780581,
562
+ "atom_plddt_mae": 0.3980872093717957,
563
+ "calibration_error_10bin": 0.35998408853867514,
564
+ "plddt_ce": 6.997704193834215,
565
+ "pae_ce": 4.1312964600510895,
566
+ "within_target_plddt_accuracy": 0.4329896907216495,
567
+ "within_target_plddt_pairs": 388.0,
568
+ "within_target_iptm_dockq_accuracy": 0.49464668094218417,
569
+ "within_target_iptm_dockq_pairs": 467.0,
570
+ "top1_regret": 0.022609415015751772,
571
+ "random_selection_regret": 0.0255562292536598,
572
+ "complexes_without_dockq": 3.0,
573
+ "disorder_auroc": 0.44711820806493024,
574
+ "resolved_residue_mean_plddt": 0.375095036748,
575
+ "unresolved_residue_mean_plddt": 0.4102032193393433,
576
+ "resolved_fraction_below_50": 0.7352903798650884,
577
+ "unresolved_fraction_below_50": 0.6716143210328724,
578
+ "unresolved_residues": 109210.0
579
+ },
580
+ "interval_95": {
581
+ "targets": [
582
+ 512.0,
583
+ 512.0
584
+ ],
585
+ "plddt_lddt_spearman": [
586
+ -0.52335732572065,
587
+ -0.38732101336377367
588
+ ],
589
+ "ptm_tm_spearman": [
590
+ -0.12180984210126579,
591
+ 0.050158440257866005
592
+ ],
593
+ "iptm_dockq_spearman": [
594
+ -0.2876064723314669,
595
+ -0.05264350662088997
596
+ ],
597
+ "atom_plddt_mae": [
598
+ 0.3857039894825003,
599
+ 0.41007111304775756
600
+ ],
601
+ "calibration_error_10bin": [
602
+ 0.3408442564608503,
603
+ 0.3769554419480031
604
+ ],
605
+ "plddt_ce": [
606
+ 6.854665873663034,
607
+ 7.143868720836472
608
+ ],
609
+ "pae_ce": [
610
+ 4.073000658166129,
611
+ 4.1880627693235875
612
+ ],
613
+ "within_target_plddt_accuracy": [
614
+ 0.3649373230051641,
615
+ 0.5072334508952794
616
+ ],
617
+ "within_target_plddt_pairs": [
618
+ 308.975,
619
+ 469.025
620
+ ],
621
+ "within_target_iptm_dockq_accuracy": [
622
+ 0.4198267234443376,
623
+ 0.5689243011988571
624
+ ],
625
+ "within_target_iptm_dockq_pairs": [
626
+ 382.975,
627
+ 552.025
628
+ ],
629
+ "top1_regret": [
630
+ 0.018251742612939093,
631
+ 0.02768111776165312
632
+ ],
633
+ "random_selection_regret": [
634
+ 0.02121735353374924,
635
+ 0.030562563818390776
636
+ ],
637
+ "complexes_without_dockq": [
638
+ 0.0,
639
+ 7.0
640
+ ],
641
+ "disorder_auroc": [
642
+ 0.4242233384330747,
643
+ 0.47146970859194287
644
+ ],
645
+ "resolved_residue_mean_plddt": [
646
+ 0.3650671320047988,
647
+ 0.3852398075516336
648
+ ],
649
+ "unresolved_residue_mean_plddt": [
650
+ 0.39432464517141264,
651
+ 0.4262182019757399
652
+ ],
653
+ "resolved_fraction_below_50": [
654
+ 0.7137772708618456,
655
+ 0.7572558921478015
656
+ ],
657
+ "unresolved_fraction_below_50": [
658
+ 0.6331681787616278,
659
+ 0.707924760751355
660
+ ],
661
+ "unresolved_residues": [
662
+ 95854.625,
663
+ 123721.5
664
+ ]
665
+ },
666
+ "by_stratum": {
667
+ "complex": {
668
+ "targets": 128.0,
669
+ "plddt_lddt_spearman": -0.2629275980898391,
670
+ "ptm_tm_spearman": 0.2300126159975977,
671
+ "iptm_dockq_spearman": 0.14321029531322102,
672
+ "atom_plddt_mae": 0.3690968421921726,
673
+ "calibration_error_10bin": 0.31859984466445657,
674
+ "plddt_ce": 6.602282754331827,
675
+ "pae_ce": 3.7138928458094598,
676
+ "within_target_plddt_accuracy": 0.4723618090452261,
677
+ "within_target_plddt_pairs": 199.0,
678
+ "within_target_iptm_dockq_accuracy": 0.5396825396825397,
679
+ "within_target_iptm_dockq_pairs": 189.0,
680
+ "top1_regret": 0.027519297438531015,
681
+ "random_selection_regret": 0.04065019038261136,
682
+ "complexes_without_dockq": 0.0,
683
+ "disorder_auroc": 0.4039054321224885,
684
+ "resolved_residue_mean_plddt": 0.34707233986460395,
685
+ "unresolved_residue_mean_plddt": 0.39964484572181597,
686
+ "resolved_fraction_below_50": 0.8199793900434281,
687
+ "unresolved_fraction_below_50": 0.7290818286592393,
688
+ "unresolved_residues": 39045.0
689
+ },
690
+ "dimer_hetero": {
691
+ "targets": 96.0,
692
+ "plddt_lddt_spearman": -0.5584823501838115,
693
+ "ptm_tm_spearman": -0.16156374376624896,
694
+ "iptm_dockq_spearman": -0.33260208550109505,
695
+ "atom_plddt_mae": 0.4284832754683854,
696
+ "calibration_error_10bin": 0.393740062641617,
697
+ "plddt_ce": 7.7741657316684725,
698
+ "pae_ce": 4.552713846166928,
699
+ "within_target_plddt_accuracy": 0.39285714285714285,
700
+ "within_target_plddt_pairs": 28.0,
701
+ "within_target_iptm_dockq_accuracy": 0.366412213740458,
702
+ "within_target_iptm_dockq_pairs": 131.0,
703
+ "top1_regret": 0.029089601933155688,
704
+ "random_selection_regret": 0.027301535718445975,
705
+ "complexes_without_dockq": 2.0,
706
+ "disorder_auroc": 0.4385989564383443,
707
+ "resolved_residue_mean_plddt": 0.38213504355647043,
708
+ "unresolved_residue_mean_plddt": 0.42602282757431903,
709
+ "resolved_fraction_below_50": 0.6686829675634769,
710
+ "unresolved_fraction_below_50": 0.6079190101237345,
711
+ "unresolved_residues": 22225.0
712
+ },
713
+ "dimer_homo": {
714
+ "targets": 96.0,
715
+ "plddt_lddt_spearman": -0.24492076788527728,
716
+ "ptm_tm_spearman": -0.21414763084909216,
717
+ "iptm_dockq_spearman": -0.27453697534976684,
718
+ "atom_plddt_mae": 0.40696842793642574,
719
+ "calibration_error_10bin": 0.38449131658216823,
720
+ "plddt_ce": 7.253352146844069,
721
+ "pae_ce": 3.9374823088447255,
722
+ "within_target_plddt_accuracy": 0.36363636363636365,
723
+ "within_target_plddt_pairs": 77.0,
724
+ "within_target_iptm_dockq_accuracy": 0.5510204081632653,
725
+ "within_target_iptm_dockq_pairs": 147.0,
726
+ "top1_regret": 0.040654180544426786,
727
+ "random_selection_regret": 0.04208677173954537,
728
+ "complexes_without_dockq": 1.0,
729
+ "disorder_auroc": 0.4416519309606944,
730
+ "resolved_residue_mean_plddt": 0.35818679638667233,
731
+ "unresolved_residue_mean_plddt": 0.3842895620090789,
732
+ "resolved_fraction_below_50": 0.8404331985426593,
733
+ "unresolved_fraction_below_50": 0.7944078947368421,
734
+ "unresolved_residues": 15200.0
735
+ },
736
+ "long": {
737
+ "targets": 64.0,
738
+ "plddt_lddt_spearman": -0.4672820291213782,
739
+ "ptm_tm_spearman": -0.27442028242463307,
740
+ "iptm_dockq_spearman": -0.29251083741957346,
741
+ "atom_plddt_mae": 0.2218396078713251,
742
+ "calibration_error_10bin": 0.16761922234392246,
743
+ "plddt_ce": 5.079701980948448,
744
+ "pae_ce": 3.365559956431389,
745
+ "within_target_plddt_accuracy": 0.3125,
746
+ "within_target_plddt_pairs": 80.0,
747
+ "within_target_iptm_dockq_accuracy": 0.5483870967741935,
748
+ "within_target_iptm_dockq_pairs": 93.0,
749
+ "top1_regret": 0.03275064056928431,
750
+ "random_selection_regret": 0.027588367028846116,
751
+ "complexes_without_dockq": 0.0,
752
+ "disorder_auroc": 0.3703166392765728,
753
+ "resolved_residue_mean_plddt": 0.44806016583574,
754
+ "unresolved_residue_mean_plddt": 0.5301691160638066,
755
+ "resolved_fraction_below_50": 0.6767006190404292,
756
+ "unresolved_fraction_below_50": 0.5140561339972839,
757
+ "unresolved_residues": 44180.0
758
+ },
759
+ "monomer_long": {
760
+ "targets": 64.0,
761
+ "plddt_lddt_spearman": -0.3048113262824832,
762
+ "ptm_tm_spearman": 0.14238163946913543,
763
+ "iptm_dockq_spearman": NaN,
764
+ "atom_plddt_mae": 0.307409615921809,
765
+ "calibration_error_10bin": 0.2590820079291291,
766
+ "plddt_ce": 5.429045923054218,
767
+ "pae_ce": 4.094500637054443,
768
+ "within_target_plddt_accuracy": 0.5,
769
+ "within_target_plddt_pairs": 20.0,
770
+ "within_target_iptm_dockq_accuracy": NaN,
771
+ "within_target_iptm_dockq_pairs": 0.0,
772
+ "top1_regret": 0.007267535198479891,
773
+ "random_selection_regret": 0.006965015921741718,
774
+ "complexes_without_dockq": 0.0,
775
+ "disorder_auroc": 0.49206433255629,
776
+ "resolved_residue_mean_plddt": 0.4911848931863719,
777
+ "unresolved_residue_mean_plddt": 0.4969835292960241,
778
+ "resolved_fraction_below_50": 0.45635315486061756,
779
+ "unresolved_fraction_below_50": 0.4729676787463271,
780
+ "unresolved_residues": 20420.0
781
+ },
782
+ "monomer_medium": {
783
+ "targets": 64.0,
784
+ "plddt_lddt_spearman": -0.08831226379163859,
785
+ "ptm_tm_spearman": 0.09156937567749684,
786
+ "iptm_dockq_spearman": NaN,
787
+ "atom_plddt_mae": 0.5299291902302865,
788
+ "calibration_error_10bin": 0.5197025035471922,
789
+ "plddt_ce": 7.672500057518482,
790
+ "pae_ce": 4.5258576080203055,
791
+ "within_target_plddt_accuracy": 0.6666666666666666,
792
+ "within_target_plddt_pairs": 3.0,
793
+ "within_target_iptm_dockq_accuracy": NaN,
794
+ "within_target_iptm_dockq_pairs": 0.0,
795
+ "top1_regret": 0.005534041672945023,
796
+ "random_selection_regret": 0.004238354042172433,
797
+ "complexes_without_dockq": 0.0,
798
+ "disorder_auroc": 0.5925183475039575,
799
+ "resolved_residue_mean_plddt": 0.33287747097606835,
800
+ "unresolved_residue_mean_plddt": 0.27279337037081697,
801
+ "resolved_fraction_below_50": 0.7631084382634843,
802
+ "unresolved_fraction_below_50": 0.8434988179669031,
803
+ "unresolved_residues": 8460.0
804
+ },
805
+ "monomer_short": {
806
+ "targets": 64.0,
807
+ "plddt_lddt_spearman": -0.43186688834851905,
808
+ "ptm_tm_spearman": -0.006176573989980371,
809
+ "iptm_dockq_spearman": NaN,
810
+ "atom_plddt_mae": 0.5644917836430194,
811
+ "calibration_error_10bin": 0.5510100045818213,
812
+ "plddt_ce": 7.134245243668556,
813
+ "pae_ce": 4.266933511197567,
814
+ "within_target_plddt_accuracy": 0.3770491803278688,
815
+ "within_target_plddt_pairs": 61.0,
816
+ "within_target_iptm_dockq_accuracy": NaN,
817
+ "within_target_iptm_dockq_pairs": 0.0,
818
+ "top1_regret": 0.008903929963707924,
819
+ "random_selection_regret": 0.008176452666521072,
820
+ "complexes_without_dockq": 0.0,
821
+ "disorder_auroc": 0.40551685977129565,
822
+ "resolved_residue_mean_plddt": 0.299003767419487,
823
+ "unresolved_residue_mean_plddt": 0.3700430870212981,
824
+ "resolved_fraction_below_50": 0.7820874635568513,
825
+ "unresolved_fraction_below_50": 0.6476683937823834,
826
+ "unresolved_residues": 3860.0
827
+ }
828
+ }
829
+ }
830
+ }
confidence-v2/v2-reproduction-20260922/public/evaluation/esmfold2_300/targets.json ADDED
The diff for this file is too large to render. See raw diff