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Puts us within spitting distance of making this something EAs can override | {
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The goal of the manylinux project is to provide a convenient way to distribute binary Python extensions as wheels on Linux. This effort has produced PEP 513 (manylinux1), PEP 571 (manylinux2010), PEP 599 (manylinux2014) and PEP 600 (manylinux_x_y).
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Thanks realead for fixing the tests.
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Whats new:
Add a test to `pandas/tests/indexes/multi/test_reindex.py`
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It is depreciated and needs replacement with ax.get_subplotspec().is_first_col().
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More like an improvement.
#### Describe the solution you'd like
I just started playing around with pandas styling, and I noticed there is no way to print only the head and/or tail of a stylized DataFrame. It would be awesome if the styling could be applied to ... | {
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- [x] I have confirmed this bug exists on the latest version of pandas.
- [x] (optional) I have confirmed this bug exists on the master branch of pandas.
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```python
import pandas as pd
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xlrd.biffh.XLRDError: Excel xlsx file; not supported
>>>
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https://api.github.com/repos/pandas-dev/pandas/issues/42538 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42538/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42538/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42538/events | https://github.com/pandas-dev/pandas/pull/42538 | 944,736,570 | MDExOlB1bGxSZXF1ZXN0NjkwMTcyODE3 | 42,538 | CI: Run some checks on push on 1.3.x | {
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- [ ] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [ ] whatsnew entry
Not turning on CI/Checks since that one is non-trivial since it requires configuring the doc... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42539 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42539/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42539/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42539/events | https://github.com/pandas-dev/pandas/pull/42539 | 944,771,645 | MDExOlB1bGxSZXF1ZXN0NjkwMjAzMjMy | 42,539 | Revert "CI: runtime warning in npdev build" | {
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"followers_url": "https://api.github.co... | 3 | 2021-07-14T20:27:46Z | 2021-07-16T01:53:40Z | 2021-07-14T23:12:09Z | MEMBER | null | Reverts pandas-dev/pandas#42413
Test passing on 3.9 numpydev again?
Numpydev is red again b/c of this I think.
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https://pandas.pydata.org/docs/dev/reference/api/pandas.json_normalize.html (currently responds with a `404 Not Found`)
#### Documentation problem
While the source code does contain API reference documentation for `pandas.json_normalize` (previously `pandas.io.json.json_norma... | {
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- [x] tests added / passed
- [x] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [x] whatsnew entry
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> *suffixeslist-like, default is (“_x”, “_y”)*
> A length-2 sequence where each element is optionally a string indicating the suffix to add to overlapping column names in left and right respectively. _**Pass a value of None**_ instead of a st... | {
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```
In [3]: ser = pd.Series([pd.NA], dtype="Int64")
In [4]: ser.isin([pd.NA])
Out[4]:
0 True
dtype: boolean
In [5]: ser.isin([np.nan])
Out[5]:
0 False
dtype: boolean
```
`StringArray.isin` also follows this behavior, so it is not `MaskedArray` specific.
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```
In[13]:
df = pd.DataFrame([1,2,3], columns=['num'])
df.describe().loc['count']
Out[13]:
num 3.0
Name: count, dtype: float64
```
I think count variable should be integer type because it is "count".
#### Describe the solution you'd like
Before ... | {
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- [x] I have confirmed this bug exists on the latest version of pandas.
- [x] (optional) I have confirmed this bug exists on the master branch of pandas.
---
#### Code Sample, a copy-pastable example
This requires both pandas and grpcio-... | {
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... | open | false | null | [] | null | 7 | 2021-07-15T16:01:35Z | 2021-07-16T17:36:52Z | null | CONTRIBUTOR | null | #### Is your feature request related to a problem?
Currently, the constructor for `Series` has the `name` argument as a `str` or `None` . But `Series.name` can return a `Hashable`, e.g., as a result of using `DataFrame.xs()` or `.iloc` on a row of a `DataFrame`.
So this is inconsistent. I think people expect th... | {
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- [x] I have confirmed this bug exists on the latest version of pandas.
- [x] (optional) I have confirmed this bug exists on the master branch of pandas.
---
#### Code Sample, a copy-pastable example
```python
import pandas as pd
exi =... | {
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This fails ArrayManager.
cc @jbrockmendel | {
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"followers_url": "https://api.github.co... | 2 | 2021-07-15T22:44:41Z | 2021-07-22T18:37:22Z | 2021-07-16T13:26:04Z | CONTRIBUTOR | null | I have added Ibis to pandas ecosystem under the section of Out_of_core. This solves issue #20483
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**Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/min... | {
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- [ ] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [ ] whatsnew entry
cc @simonjayhawkins
How this was tested
I made a fake 1.3.x branch which is actuall... | {
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- [X] (optional) I have confirmed this bug exists on the master branch of pandas.
**Note**: Not in a released pandas, only master
---
#### Code Sample
```python
import pandas as pd
mi = pd.MultiIndex.from_product([["a","b"],[1,2],["z","y"]... | {
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- [ ] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
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Prior to [GH40230](https://github.com/pandas-dev/pandas/issues/40230) it was possible to write to existing sheet using code like below. I would like to be able to do it again.
I use it to create excel files with overly compicated and/or regularly changing header re... | {
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- [x] closes #15307
- [x] tests added / passed
- [x] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [x] whatsnew entry
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I wish DataFrame.read_excel could skip automatically the rows that are hidden in excel. I want to read data from an excel sheet but I want to select within excel the data that will go to the dataFrame. I am using excel filter to select data of interest so some lines... | {
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closes #40855
- [X] closes #40855
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I accidentally made a typo in #42556.
Hopefully works this time. The docs weren't getting... | {
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- [ ] I have asked my usage related question on [StackOverflow](https://stackoverflow.com).
---
#### Question about pandas
```python
>>> import numpy as np
>>> import pandas ... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42575 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42575/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42575/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42575/events | https://github.com/pandas-dev/pandas/pull/42575 | 946,612,267 | MDExOlB1bGxSZXF1ZXN0NjkxNzU2NjE0 | 42,575 | Revert "PERF: tighten _should_compare for MultiIndex" | {
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This introduced a bug discussed in #42231. The long-term fix is in MultiIndex.get_indexer, but that's going to take me a little while to get done. | {
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This should close #38645 in conjunction with dask/dask#7888, will hold off on closing the i... | {
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@mzeitlin11 did you want to suggest an improved warning message for .insert? | {
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- [ x] I have checked that this issue has not already been reported.
- [ x] I have confirmed this bug exists on the latest version of pandas.
- [ x] (optional) I have confirmed this bug exists on the master branch of pandas.
---
**Note**: Please read [this guide](https://matthewrocklin.com/blog/work... | {
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- [X] I have confirmed this bug exists on the latest version of pandas.
---
**Note**: Please read [this guide](https://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) detailing how to provide the necessary information for us to re... | {
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- [ ] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [ ] whatsnew entry
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Note, this would make the next release 1.4 for sure.
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See these logs from database build for example.
```
___________________________ test_cross_engine_fp_pa ____________________________
[gw1] linux -- Python 3.8.10 /usr/share/miniconda/envs/pandas-dev/bin/python
request = <FixtureRequest for <Function test_cross... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42591 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42591/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42591/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42591/events | https://github.com/pandas-dev/pandas/pull/42591 | 947,037,736 | MDExOlB1bGxSZXF1ZXN0NjkyMDkxMzMy | 42,591 | BUG: pivot_table with margins=True and numeric columns is buggy | {
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- [x] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [x] Added test for issue #26568
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https://api.github.com/repos/pandas-dev/pandas/issues/42592 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42592/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42592/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42592/events | https://github.com/pandas-dev/pandas/issues/42592 | 947,039,519 | MDU6SXNzdWU5NDcwMzk1MTk= | 42,592 | What the fucking meaning? Numerical issues were encountered when scaling the data and might not be solved. The standard deviation of the data is probably very close to 0. | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42593 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42593/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42593/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42593/events | https://github.com/pandas-dev/pandas/issues/42593 | 947,049,637 | MDU6SXNzdWU5NDcwNDk2Mzc= | 42,593 | ENH: rename, or at least alias, "quantile" method with "fractile" | {
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The method called quantile, is misnamed. What is it calculating is the fractile. A fractile is a number, where fractile(x) = percentile(100x). A quantile is a set of fractiles.
#### Describe the solution you'd like
Fractile becomes an alias of quantile in ... | {
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- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [ ] This is a test to see if this passes the CI tests. I will close the pull request after the CI have completed.... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42595 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42595/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42595/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42595/events | https://github.com/pandas-dev/pandas/pull/42595 | 947,094,179 | MDExOlB1bGxSZXF1ZXN0NjkyMTMxMzEw | 42,595 | STYLE bump pandas-dev-flaker | {
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- [ ] tests added / passed
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- [ ] whatsnew entry
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- [x] Closes #16345
- [x] Closes #29129
- [x] tests added / passed
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In order for Dask to perform large shuffles (set_index, join on a non-index column, ...) on a column it needs to be able to compute quantiles.
To do this it is useful to compute min/max values.
## What actually breaks
When I try to do this on columns of type `string[pyarrow]` I get the follo... | {
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Fixing 4 broken doctests, so we can validate the whole `pandas/core` directory. And also, significantly reduce the list of directories/files in the call to validate the doctests. | {
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- [ ] I have confirmed this bug exists on the latest version of pandas.
- [ ] (optional) I have confirmed this bug exists on the master branch of pandas.
---
#### Code Sample, a copy-pastable example
```python
>>> pd.Series(np.nan) == p... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42600 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42600/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42600/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42600/events | https://github.com/pandas-dev/pandas/issues/42600 | 947,152,394 | MDU6SXNzdWU5NDcxNTIzOTQ= | 42,600 | ENH: Serialize view of ArrowStringArray | {
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"description": "String e... | open | false | null | [] | null | 4 | 2021-07-19T00:32:53Z | 2021-07-22T17:51:47Z | null | CONTRIBUTOR | null | Currently Pandas serializes views of ArrowStringArrays by serailizing the whole thing, rather than a subset. Here is an example:
```python
In [1]: import pandas as pd
In [2]: s = pd.Series([c * 1000 for c in "abcdefghijklmnopqrstuvwxyz"])
In [3]: s
Out[3]:
0 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42601 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42601/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42601/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42601/events | https://github.com/pandas-dev/pandas/issues/42601 | 947,254,738 | MDU6SXNzdWU5NDcyNTQ3Mzg= | 42,601 | QST: pandas rolling enabling offset even if my index is not datetime | {
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df = pd.DataFrame({'B': [0, 1, 2, np.nan, 4]},index=[0.1,0.2,0.5,0.7,0.9])
df
B
0.1 0.0
0.2 1.0
0.5 2.0
0.7 NaN
0.9 4.0
I want to perform an offset based rolling like:
df.rolling(0.3).sum()
But I got this error:
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https://api.github.com/repos/pandas-dev/pandas/issues/42602 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42602/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42602/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42602/events | https://github.com/pandas-dev/pandas/pull/42602 | 947,340,806 | MDExOlB1bGxSZXF1ZXN0NjkyMzM2MTU4 | 42,602 | ⬆️ UPGRADE: Autoupdate pre-commit config | {
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<!-- END pr-commits -->
## Base PullRequest
default branch (https://github.com/pandas-dev/pandas/tree/master)
## Command results
<details>
<summary>Details: </summary>
<details>
<summary><em>add path</em></summary>
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https://api.github.com/repos/pandas-dev/pandas/issues/42603 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42603/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42603/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42603/events | https://github.com/pandas-dev/pandas/issues/42603 | 947,341,661 | MDU6SXNzdWU5NDczNDE2NjE= | 42,603 | BUG: Pandas loc can result in ambiguous result not caught by an exception | {
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- [X] I have confirmed this bug exists on the latest version of pandas.
- [ ] (optional) I have confirmed this bug exists on the master branch of pandas.
---
#### Code Sample
Tested on Pandas 1.3.0.
```python
import pandas as pd
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"defa... | open | false | null | [] | null | 0 | 2021-07-19T12:00:14Z | 2021-08-21T19:04:40Z | null | CONTRIBUTOR | null | Per comment in PR #41985 :
https://github.com/pandas-dev/pandas/pull/41985/files/c14bca375fc1f88b0ebc3fdf9d94bab568d1066a#r672213029
PR updated the docs, which reflected that `pandas.core.algorithms.duplicated()` does accept a `Series` as an argument:
```python
>>> import pandas as pd
>>> from pandas.core.algori... | {
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- [ ] closes #xxxx
- [ ] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [ ] whatsnew entry
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https://api.github.com/repos/pandas-dev/pandas/issues/42606 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42606/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42606/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42606/events | https://github.com/pandas-dev/pandas/issues/42606 | 947,590,330 | MDU6SXNzdWU5NDc1OTAzMzA= | 42,606 | BUG: to_datetime very slow with unsigned ints for unix seconds | {
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- [ ] I have confirmed this bug exists on the latest version of pandas.
- [ ] (optional) I have confirmed this bug exists on the master branch of pandas.
---
I had a data pipeline that was terribly slow. Turns out the issue was that all the... | {
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- [x] I have confirmed this bug exists on the latest version of pandas.
- [ ] (optional) I have confirmed this bug exists on the master branch of pandas.
---
#### Code Sample
```python
import pandas as pd
# Test 1 - Group by with val... | {
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... | open | false | null | [] | null | 3 | 2021-07-19T15:29:14Z | 2021-08-21T19:08:57Z | null | NONE | null | As of today, the result of filtering after grouping is a `DataFrame` :
```
type(df.groupby("foobar").filter(lambda x: len(x)>1)) == pandas.core.frame.DataFrame
```
However in many cases it also makes sense to filter **but keep a DataFrameGroupBy object**.
Surprisingly, I didn’t find such a feature request he... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42611 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42611/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42611/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42611/events | https://github.com/pandas-dev/pandas/pull/42611 | 947,836,516 | MDExOlB1bGxSZXF1ZXN0NjkyNzYzMzk1 | 42,611 | PERF: select_dtypes | {
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In [1]: from asv_bench.benchmarks.dtypes import *
In [2]: cls = SelectDtypes
In [3]: self = cls()
In [4]: dtype = "Int32"
In [5]: self.setup(dtype)
In [6]: %timeit self.time_select_dtype_string_exclude(dtype)
1.79 ms ± 50.7 µs per loop (mean ± std. dev. of 7 runs, 1000 loops each) # <-- master
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- [ ] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [ ] whatsnew entry
Get CI to green. | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42613 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42613/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42613/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42613/events | https://github.com/pandas-dev/pandas/issues/42613 | 947,949,614 | MDU6SXNzdWU5NDc5NDk2MTQ= | 42,613 | PyArrow StringDtype / StringArray fallback policy | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42614 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42614/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42614/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42614/events | https://github.com/pandas-dev/pandas/pull/42614 | 947,951,485 | MDExOlB1bGxSZXF1ZXN0NjkyODU5MzAx | 42,614 | CI/TYP: remove unneeded stata ignore | {
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"followers_url": "https://api.github.co... | 3 | 2021-07-19T19:17:28Z | 2021-07-19T21:10:47Z | 2021-07-19T20:23:49Z | MEMBER | null | Should fix typing failure on master
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- [ y] I have asked my usage related question on [StackOverflow](https://stackoverflow.com/questions/68446123/how-to-perform-group-by-rolling-efficiently-based-on-datetime-index?noredi... | {
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```
df = pd.DataFrame({'a' : [1], 'b' : [2.], 'c' : ['3']})
res = df.groupby([0]).transform(lambda x: x.max() - x.min())
print(res)
df = pd.DataFrame({'a' : [1], 'b' : [2.]})
res = df.groupby([0]).transform(lambda x: x.max() - x.min())
print(res)
```
gives
```
a b
0 0 0.0
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"followers_url": "https://api.github.co... | 5 | 2021-07-19T21:46:34Z | 2021-07-24T03:29:22Z | 2021-07-24T03:29:22Z | NONE | null | - [x] I have checked that this issue has not already been reported.
- [x] I have confirmed this bug exists on the latest version of pandas.
- [ ] (optional) I have confirmed this bug exists on the master branch of pandas.
---
#### Code Sample, a copy-pastable example
```python
import pandas as pd
pd.Data... | {
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https://api.github.com/repos/pandas-dev/pandas/issues/42619 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42619/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42619/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42619/events | https://github.com/pandas-dev/pandas/pull/42619 | 948,182,288 | MDExOlB1bGxSZXF1ZXN0NjkzMDU4OTI4 | 42,619 | DOC: update redirecting URLs | {
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"followers_url": "https://api.github.com/users/jreback/followers",... | 1 | 2021-07-20T02:10:07Z | 2021-08-06T13:29:45Z | 2021-08-06T04:44:17Z | CONTRIBUTOR | null | - [ ] closes #xxxx
- [ ] tests added / passed
- [ ] Ensure all linting tests pass, see [here](https://pandas.pydata.org/pandas-docs/dev/development/contributing.html#code-standards) for how to run them
- [ ] whatsnew entry
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https://api.github.com/repos/pandas-dev/pandas/issues/42620 | https://api.github.com/repos/pandas-dev/pandas | https://api.github.com/repos/pandas-dev/pandas/issues/42620/labels{/name} | https://api.github.com/repos/pandas-dev/pandas/issues/42620/comments | https://api.github.com/repos/pandas-dev/pandas/issues/42620/events | https://github.com/pandas-dev/pandas/pull/42620 | 948,224,829 | MDExOlB1bGxSZXF1ZXN0NjkzMDk0MjI1 | 42,620 | CLN: move mypy config to pyproject.toml | {
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