repo_id stringlengths 6 101 | size int64 367 5.14M | file_path stringlengths 2 269 | content stringlengths 367 5.14M |
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27182812/ChatGLM-LLaMA-chinese-insturct | 2,546 | src/transformers/models/longt5/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_flax_available, is_torch_available
_import_structure = {
"configuration_longt5": ["LONGT5_PRETRAINED_CONFIG_ARCHIVE_MAP", "LongT5Config", "LongT5OnnxConfig"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_longt5"] = [
"LONGT5_PRETRAINED_MODEL_ARCHIVE_LIST",
"LongT5EncoderModel",
"LongT5ForConditionalGeneration",
"LongT5Model",
"LongT5PreTrainedModel",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_longt5"] = [
"FlaxLongT5ForConditionalGeneration",
"FlaxLongT5Model",
"FlaxLongT5PreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_longt5 import LONGT5_PRETRAINED_CONFIG_ARCHIVE_MAP, LongT5Config, LongT5OnnxConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_longt5 import (
LONGT5_PRETRAINED_MODEL_ARCHIVE_LIST,
LongT5EncoderModel,
LongT5ForConditionalGeneration,
LongT5Model,
LongT5PreTrainedModel,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_longt5 import (
FlaxLongT5ForConditionalGeneration,
FlaxLongT5Model,
FlaxLongT5PreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
233zzh/TitanDataOperationSystem | 3,261 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/package.scala | package cn.edu.neu.titan.titanSpark.migration
import org.apache.spark.sql.SaveMode
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/20
* @Time: 9:05
* @Version: 1.0
* @Description: Description
*/
package object participation {
/**
* 张志浩需要，改写王阔得
* 源表及对应列名，目标表，维度等信息执行操作
*
* @param maps 源表及对应列名
* @param tbTarget 目标表
* @param tbDim 维度表
* @param dimName 维度名
*/
def executeMigrate2(dt: String, maps: Array[(String, String)], tbTarget: String, tbDim: String, dimName: String, colTargets: Array[String]): Unit = {
// 临时变量
val tbDimTemp = s"tb${dimName}Temp"
val tbBaseTemps = new Array[String](maps.length)
val tbPrefix = s"${dimName}Temp"
createTableDim(tbDim, tbDimTemp, dimName)
var i = 0
maps.foreach(t => {
val tbBaseTemp = tbPrefix + i
createTableBase(dt, t, tbBaseTemp, dimName)
tbBaseTemps.update(i, tbBaseTemp)
i += 1
})
joinAndInsert2(tbBaseTemps, tbTarget, dimName, tbDimTemp, colTargets)
}
/**
* 获取表中相应维度的数据并创建临时视图
*
* @param map (源表名,代表数量的列名)
* @param tbTempName 临时表名
* @param dimName 维度名
*/
def createTableBase(dt: String, map: (String, String), tbTempName: String, dimName: String): Unit = {
val sql_create = s"select $dimName, " +
"case when version is NULL then '' else version end as version," +
"case when channel is NULL then '' else channel end as channel," +
s"${map._2} num from ${map._1} " +
s"where dt='$dt' and $dimName is Not NULL"
// 创建临时视图
spark.sql(sql_create).createOrReplaceTempView(tbTempName)
}
/**
* 创建维度表用于补零
*
* @param tbDimName 维度表
* @param tbTempName 创建的临时表的名字
*/
def createTableDim(tbDimName: String, tbTempName: String, dimName: String): Unit = {
val dimMysql = s"Mysql$dimName"
spark.read.jdbc(url, tbDimName, connectionProperties).createOrReplaceTempView(dimMysql)
val sql_create = s"select * from $dimMysql, $tbCVJoin "
spark.sql(sql_create).createOrReplaceTempView(tbTempName)
}
/**
* 张志浩需要，改写王阔得
* 做左外连接并插入结果
*
* @param tbBaseNames 临时表
* @param tbTarget 目标表
* @param dimName 维度名
* @param tbDimName 维度表
*/
def joinAndInsert2(tbBaseNames: Array[String], tbTarget: String, dimName: String, tbDimName: String, colTargets: Array[String]): Unit = {
val cols_part = StringBuilder.newBuilder
val join_part = StringBuilder.newBuilder
var i = 0
while (i < tbBaseNames.length) {
val elem = tbBaseNames(i)
val col = colTargets(i)
cols_part ++= s", case when $elem.num is NULL then 0 else $elem.num end as $col "
// cols_part ++= s", $elem.num as $col "
join_part ++= s"left join $elem on name=$elem.$dimName and vname=$elem.version and cname=$elem.channel "
i += 1
}
val dateName = tbTarget.split("_")(2)
val sql_insert = s"select '$currentDate' ${dateName}_date, " +
"cid channel_id," +
"vid version_id," +
"id range_id" +
s"$cols_part " +
s"from $tbDimName $join_part "
// println(sql_insert)
spark.sql(sql_insert).write.mode(SaveMode.Append).jdbc(url, tbTarget, connectionProperties)
}
}
|
233zzh/TitanDataOperationSystem | 2,012 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/terminal/function/ProvinceFunction.scala | package cn.edu.neu.titan.titanSpark.migration.terminal.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.terminal._
import cn.edu.neu.titan.titanSpark.migration.terminal.function.ModelFunction.migrate
import cn.edu.neu.titan.titanSpark.migration.{connectionProperties, currentDate, spark, url}
import org.apache.spark.sql.SaveMode
/**
* Created by IntelliJ IDEA.
*
* @Author: Wang Kuo
* @Email: 2383536228@qq.com
* @Date: 2020/7/14
* @Time: 10:22
* @Version: 1.0
* @Description: Description
*/
object ProvinceFunction {
def migrate()= {
// 源表和目标表
val tbTarget = Constants.MYSQL_TABLE_TERMINAL_REGION_PROVINCE
val tbDim = Constants.MYSQL_TABLE_PROVINCE
val dimName = "provinceid"
val tbDimTemp = "tbDimTemp"
val tbBaseTemps = Array("tbProNew", "tbProActive", "tbProStart")
val colTarget = Array(colIncrease, colActive, colLaunch)
val tbBases = Array((tbNewSource, colDNU), (tbActiveSource, colDAU), (tbStartSource, colStart))
createTableDim(tbDim, tbDimTemp, dimName)
var i = 0;
for (tbBaseTemp <- tbBaseTemps) {
createTableBase(tbBases(i), tbBaseTemp, dimName)
i += 1
}
val cols_part = StringBuilder.newBuilder
val join_part = StringBuilder.newBuilder
i = 0
while ( i<tbBaseTemps.length ) {
val elem = tbBaseTemps(i)
val col = colTarget(i)
cols_part ++= s", case when $elem.num is NULL then 0 else $elem.num end as $col "
join_part ++= s"left join $elem on cast(id as string)=$elem.$dimName and vname=$elem.version and cname=$elem.channel "
i += 1
}
val sql_insert = s"select '$currentDate' province_date, " +
"cid channel_id," +
"vid version_id," +
s"id province_id" +
s"$cols_part " +
s"from $tbDimTemp $join_part "
spark.sql(sql_insert).write.mode(SaveMode.Append).jdbc(url,tbTarget, connectionProperties)
}
def main(args: Array[String]): Unit = {
migrate()
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 105,586 | src/transformers/models/longt5/modeling_flax_longt5.py | # coding=utf-8
# Copyright 2022 LongT5 Authors and HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Flax LongT5 model."""
import copy
from typing import Any, Callable, List, Optional, Tuple
import flax.linen as nn
import jax
import jax.numpy as jnp
import numpy as np
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen import combine_masks, make_causal_mask
from flax.linen import partitioning as nn_partitioning
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from jax.random import PRNGKey
from ...modeling_flax_outputs import (
FlaxBaseModelOutput,
FlaxBaseModelOutputWithPastAndCrossAttentions,
FlaxCausalLMOutputWithCrossAttentions,
FlaxSeq2SeqLMOutput,
FlaxSeq2SeqModelOutput,
)
from ...modeling_flax_utils import (
ACT2FN,
FlaxPreTrainedModel,
append_call_sample_docstring,
append_replace_return_docstrings,
overwrite_call_docstring,
)
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_longt5 import LongT5Config
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/long-t5-local-base"
_CONFIG_FOR_DOC = "LongT5Config"
remat = nn_partitioning.remat
# Copied from transformers.models.bart.modeling_flax_bart.shift_tokens_right
def shift_tokens_right(input_ids: np.array, pad_token_id: int, decoder_start_token_id: int) -> np.ndarray:
"""
Shift input ids one token to the right.
"""
shifted_input_ids = np.zeros_like(input_ids)
shifted_input_ids[:, 1:] = input_ids[:, :-1]
shifted_input_ids[:, 0] = decoder_start_token_id
shifted_input_ids = np.where(shifted_input_ids == -100, pad_token_id, shifted_input_ids)
return shifted_input_ids
def _pad_to_multiple(x: jnp.ndarray, block_len: int, axis: int, pad_value: int = 0) -> jnp.ndarray:
"""Pad an array so that a sequence length will be a multiple of `block_len`"""
pad_len = -x.shape[axis] % block_len
pad = [(0, 0)] * x.ndim
pad[axis] = (0, pad_len)
x = jnp.pad(x, pad_width=pad, mode="constant", constant_values=pad_value)
return x
def _split_into_blocks(x: jnp.ndarray, block_len: int, axis: int) -> jnp.ndarray:
"""Split an input array into blocks of a given `block_len` along the given `axis`. If the dimension length
is not a multiple of `block_len`, it will be padded first with selected `pad_value`.
"""
# pad tensor to multiple of block_len
if x.shape[axis] % block_len != 0:
x = _pad_to_multiple(x, block_len, axis, pad_value=0)
num_blocks = x.shape[axis] // block_len
output_shape = x.shape[:axis] + (num_blocks, block_len) + x.shape[(axis + 1) :]
return x.reshape(output_shape)
def _concatenate_3_blocks(x: jnp.ndarray, block_axis: int, sequence_axis: int, pad_value: int = 0) -> jnp.ndarray:
"""Concatenate three consecutive blocks for each input block for local attentiont.
For more information, see: https://arxiv.org/pdf/2112.07916.pdf.
"""
num_blocks = x.shape[block_axis]
pad = [(0, 0)] * x.ndim
pad[block_axis] = (1, 1)
# [batch_size, num_blocks, block_len] -> [batch_size, num_blocks + 2, block_len]
x = jnp.pad(x, pad_width=pad, mode="constant", constant_values=pad_value)
blocks_list: List[np.array] = []
for i in range(3):
# We use indexing approach here:
# https://numpy.org/doc/stable/user/basics.indexing.html#dealing-with-variable-numbers-of-indices-within-programs
indices = [slice(0, None)] * x.ndim
indices[block_axis] = slice(i, i + num_blocks)
indices = tuple(indices)
blocks_list.append(x[indices])
return jnp.concatenate(blocks_list, axis=sequence_axis) # [batch_size, num_blocks, 3 * block_len, ...]
def _make_3block_relative_position_ids(block_len: int) -> jnp.ndarray:
"""Makes 3-blocked relative position ids for local attention."""
position_ids = jnp.arange(3 * block_len, dtype=jnp.int32)
center_position_ids = position_ids[block_len:-block_len]
relative_position_ids = position_ids[None, :] - center_position_ids[:, None] # [block_len, 3 * block_len]
return relative_position_ids
def _mask_local_attention_mask(local_attention_mask: np.ndarray, block_len: int) -> jnp.ndarray:
"""Mask local attention mask to enforce that tokens are not allowed to attend tokens farther than ``local_radius."""
relative_position_ids = _make_3block_relative_position_ids(block_len)
locality_mask = jnp.abs(relative_position_ids) < block_len
locality_mask = locality_mask[None, None, :, :]
return jnp.logical_and(local_attention_mask, locality_mask)
def _get_local_attention_mask(attention_mask: np.ndarray, block_len: int) -> jnp.ndarray:
"""Prepare attention mask to be applied for a local attention."""
# [batch_size, num_blocks, block_len]
_blocked_attention_mask = _split_into_blocks(attention_mask, block_len, axis=1)
# [batch_size, num_block, 3 * block_len]
_3blocked_attention_mask = _concatenate_3_blocks(_blocked_attention_mask, block_axis=1, sequence_axis=2)
_blocked_attention_mask = _blocked_attention_mask[..., None]
_3blocked_attention_mask = _3blocked_attention_mask[..., None, :]
# [batch_size, num_block, block_len, 3 * block_len]
local_attention_mask = jnp.logical_and(_blocked_attention_mask, _3blocked_attention_mask)
local_attention_mask = _mask_local_attention_mask(local_attention_mask, block_len)
# [batch_size, 1, num_block, block_len, 3 * block_len]
return local_attention_mask[:, None, ...]
def _make_global_fixed_block_ids(attention_mask: np.ndarray, global_block_size: int) -> Tuple[jnp.ndarray, np.ndarray]:
"""Obtain the "fixed block" global id corresponding to each input token.
This implementation is a simlified version of the original Flaxformr implementation adopted from:
https://github.com/google/flaxformer/blob/main/flaxformer/architectures/longt5/long_attention.py.
In our scenario, as we use this strategy only for a decoder, orphan tokens, i.e. those tokens which do not make for
the whole fixed block, are assigned to the preceding block.
Padding tokens from the original sequence are represented by -1.
"""
batch_size, seq_len = attention_mask.shape[:2]
def handle_orphan_tokens(block_ids: np.ndarray) -> jnp.ndarray:
block_ends = (jnp.arange(seq_len) % global_block_size) == global_block_size - 1
true_block_ends = jnp.logical_and(block_ends, block_ids >= 0)
full_blocks = true_block_ends.sum(-1)[..., None]
block_ids = jnp.minimum(block_ids, full_blocks - 1)
return block_ids
fixed_block_mask = jnp.ones_like(attention_mask) / global_block_size
fixed_block_mask = jnp.cumsum(fixed_block_mask, axis=1) - fixed_block_mask
mask = jnp.where(attention_mask != 0.0, 1.0, -1000.0)
global_block_ids = jnp.maximum(
jnp.floor(mask + fixed_block_mask - 1.0), jnp.array(-1.0, dtype=attention_mask.dtype)
)
# set padding tokens to -1
global_block_ids = (global_block_ids * attention_mask) + (attention_mask - 1)
# [batch_size, seq_len]
global_block_ids = handle_orphan_tokens(global_block_ids)
num_globals = seq_len // global_block_size
# [batch_size, seq_len // global_block_size]
if num_globals > 0:
_sequence_block_ids_max = jnp.repeat(global_block_ids.max(axis=-1)[:, None], repeats=num_globals, axis=1)
else:
_sequence_block_ids_max = jnp.zeros((batch_size, 0), dtype=global_block_ids.dtype)
global_segment_ids = jnp.cumsum(jnp.ones((batch_size, num_globals)), axis=-1) - 1
global_segment_ids = jnp.where(global_segment_ids <= _sequence_block_ids_max, 1, 0)
return global_block_ids, global_segment_ids
def _make_side_relative_position_ids(attention_mask: np.ndarray, global_block_size: int) -> np.ndarray:
"""Create the relative position tensor for local -> global attention."""
block_ids, global_segment_ids = _make_global_fixed_block_ids(attention_mask, global_block_size)
global_seq_len = global_segment_ids.shape[-1]
global_positions = jnp.arange(global_seq_len)
side_relative_position = global_positions - block_ids[..., None]
return side_relative_position
def _create_global_aggregates(hidden_states: np.ndarray, block_ids: np.ndarray, global_seq_len: int) -> np.ndarray:
"""Compute individual block aggregates by summing over individual blocks."""
# (batch..., seq_len, global_seq_len))
one_hot_block_ids = jax.nn.one_hot(block_ids, global_seq_len)
return jnp.einsum("...nd,...ng->...gd", hidden_states, one_hot_block_ids)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerNorm with T5->LongT5
class FlaxLongT5LayerNorm(nn.Module):
hidden_size: int
dtype: jnp.dtype = jnp.float32
eps: float = 1e-6
weight_init: Callable[..., np.ndarray] = jax.nn.initializers.ones
def setup(self):
self.weight = self.param("weight", self.weight_init, (self.hidden_size,))
def __call__(self, hidden_states):
"""
Construct a layernorm module in the LongT5 style; No bias and no subtraction of mean.
"""
# layer norm should always be calculated in float32
variance = jnp.power(hidden_states.astype("f4"), 2).mean(axis=-1, keepdims=True)
hidden_states = hidden_states / jnp.sqrt(variance + self.eps)
return self.weight * hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5DenseActDense with T5->LongT5
class FlaxLongT5DenseActDense(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32
def setup(self):
wi_init_std = self.config.initializer_factor * (self.config.d_model**-0.5)
wo_init_std = self.config.initializer_factor * (self.config.d_ff**-0.5)
self.wi = nn.Dense(
self.config.d_ff,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wi_init_std),
dtype=self.dtype,
)
self.wo = nn.Dense(
self.config.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wo_init_std),
dtype=self.dtype,
)
self.dropout = nn.Dropout(self.config.dropout_rate)
self.act = ACT2FN[self.config.dense_act_fn]
def __call__(self, hidden_states, deterministic=True):
hidden_states = self.wi(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5DenseGatedActDense with T5->LongT5
class FlaxLongT5DenseGatedActDense(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
wi_init_std = self.config.initializer_factor * (self.config.d_model**-0.5)
wo_init_std = self.config.initializer_factor * (self.config.d_ff**-0.5)
self.wi_0 = nn.Dense(
self.config.d_ff,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wi_init_std),
dtype=self.dtype,
)
self.wi_1 = nn.Dense(
self.config.d_ff,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wi_init_std),
dtype=self.dtype,
)
self.wo = nn.Dense(
self.config.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(wo_init_std),
dtype=self.dtype,
)
self.dropout = nn.Dropout(self.config.dropout_rate)
self.act = ACT2FN[self.config.dense_act_fn]
def __call__(self, hidden_states, deterministic):
hidden_gelu = self.act(self.wi_0(hidden_states))
hidden_linear = self.wi_1(hidden_states)
hidden_states = hidden_gelu * hidden_linear
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerFF with T5->LongT5
class FlaxLongT5LayerFF(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
if self.config.is_gated_act:
self.DenseReluDense = FlaxLongT5DenseGatedActDense(self.config, dtype=self.dtype)
else:
self.DenseReluDense = FlaxLongT5DenseActDense(self.config, dtype=self.dtype)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(self, hidden_states, deterministic=True):
forwarded_states = self.layer_norm(hidden_states)
forwarded_states = self.DenseReluDense(forwarded_states, deterministic=deterministic)
hidden_states = hidden_states + self.dropout(forwarded_states, deterministic=deterministic)
return hidden_states
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Attention with T5->LongT5
class FlaxLongT5Attention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
causal: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.relative_attention_num_buckets = self.config.relative_attention_num_buckets
self.relative_attention_max_distance = self.config.relative_attention_max_distance
self.d_model = self.config.d_model
self.key_value_proj_dim = self.config.d_kv
self.n_heads = self.config.num_heads
self.dropout = self.config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
q_init_std = self.config.initializer_factor * ((self.inner_dim * self.key_value_proj_dim) ** -0.5)
kv_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
o_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
self.q = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(q_init_std),
dtype=self.dtype,
)
self.k = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.v = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.o = nn.Dense(
self.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(o_init_std),
dtype=self.dtype,
)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
@staticmethod
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0) * num_buckets
relative_position = jnp.abs(relative_position)
else:
relative_position = -jnp.clip(relative_position, a_max=0)
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
jnp.log(relative_position / max_exact) / jnp.log(max_distance / max_exact) * (num_buckets - max_exact)
)
relative_position_if_large = jnp.clip(relative_position_if_large, a_max=num_buckets - 1)
relative_buckets += jnp.where(is_small, relative_position, relative_position_if_large)
return relative_buckets.astype("i4")
def compute_bias(self, query_length, key_length):
"""Compute binned relative position bias"""
context_position = jnp.arange(query_length, dtype="i4")[:, None]
memory_position = jnp.arange(key_length, dtype="i4")[None, :]
relative_position = memory_position - context_position
relative_position_bucket = self._relative_position_bucket(
relative_position,
bidirectional=(not self.causal),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket)
values = values.transpose((2, 0, 1))[None, :, :, :]
return values
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.n_heads, self.key_value_proj_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.inner_dim,))
@nn.compact
def _concatenate_to_cache(self, key, value, query, attention_mask):
"""
This function takes projected key, value states from a single input token and concatenates the states to cached
states from previous steps. This function is slighly adapted from the official Flax repository:
https://github.com/google/flax/blob/491ce18759622506588784b4fca0e4bf05f8c8cd/flax/linen/attention.py#L252
"""
# detect if we're initializing by absence of existing cache data.
is_initialized = self.has_variable("cache", "cached_key")
cached_key = self.variable("cache", "cached_key", jnp.zeros, key.shape, key.dtype)
cached_value = self.variable("cache", "cached_value", jnp.zeros, value.shape, value.dtype)
cache_index = self.variable("cache", "cache_index", lambda: jnp.array(0, dtype=jnp.int32))
if is_initialized:
*batch_dims, max_length, num_heads, depth_per_head = cached_key.value.shape
# update key, value caches with our new 1d spatial slices
cur_index = cache_index.value
indices = (0,) * len(batch_dims) + (cur_index, 0, 0)
key = jax.lax.dynamic_update_slice(cached_key.value, key, indices)
value = jax.lax.dynamic_update_slice(cached_value.value, value, indices)
cached_key.value = key
cached_value.value = value
num_updated_cache_vectors = query.shape[1]
cache_index.value = cache_index.value + num_updated_cache_vectors
# causal mask for cached decoder self-attention: our single query position should only attend to those key positions
# that have already been generated and cached, not the remaining zero elements.
pad_mask = jnp.broadcast_to(
jnp.arange(max_length) < cur_index + num_updated_cache_vectors,
tuple(batch_dims) + (1, num_updated_cache_vectors, max_length),
)
attention_mask = combine_masks(pad_mask, attention_mask)
return key, value, attention_mask
def _create_position_bias(
self, key_states, query_states, attention_mask, init_cache, seq_length, causal_attention_mask_shift
):
cache_is_filled = self.causal and self.has_variable("cache", "cached_key") and (not init_cache)
key_length = key_states.shape[1]
query_length = key_length if cache_is_filled else query_states.shape[1]
if self.has_relative_attention_bias:
position_bias = self.compute_bias(query_length, key_length)
elif attention_mask is not None:
position_bias = jnp.zeros_like(attention_mask)
else:
position_bias = jnp.zeros((1, self.n_heads, query_length, key_length), dtype=self.dtype)
# if key and values are already calculated, only the last query position bias should be taken
if cache_is_filled:
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
position_bias = jax.lax.dynamic_slice(
position_bias,
(0, 0, causal_attention_mask_shift, 0),
(1, self.n_heads, seq_length, max_decoder_length),
)
return position_bias
def __call__(
self,
hidden_states,
attention_mask=None,
key_value_states=None,
position_bias=None,
use_cache=False,
output_attentions=False,
deterministic=True,
init_cache=False,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
batch_size, seq_length = hidden_states.shape[:2]
# q, k, v projections
query_states = self.q(hidden_states) # (batch_size, n_heads, seq_length, dim_per_head)
key_states = self.k(hidden_states) if key_value_states is None else self.k(key_value_states)
value_states = self.v(hidden_states) if key_value_states is None else self.v(key_value_states)
# reshape to (batch_size, seq_length, n_heads, head_dim)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# counter-act scaling in dot_product_attention_weights function
query_states *= jnp.sqrt(query_states.shape[-1])
# for fast decoding causal attention mask should be shifted
causal_attention_mask_shift = (
self.variables["cache"]["cache_index"] if (self.has_variable("cache", "cached_key") and self.causal) else 0
)
# create causal attention_mask; attention_mask has to be defined when model is causal
if self.causal:
causal_attention_mask = make_causal_mask(attention_mask, dtype="bool")
# fast decoding for generate requires special attention_mask
if self.has_variable("cache", "cached_key"):
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
causal_attention_mask = jax.lax.dynamic_slice(
causal_attention_mask,
(0, 0, causal_attention_mask_shift, 0),
(1, 1, seq_length, max_decoder_length),
)
# broadcast causal attention mask & attention mask to fit for merge
causal_attention_mask = jnp.broadcast_to(
causal_attention_mask, (batch_size,) + causal_attention_mask.shape[1:]
)
attention_mask = jnp.broadcast_to(
jnp.expand_dims(attention_mask, axis=(-3, -2)), causal_attention_mask.shape
)
attention_mask = combine_masks(attention_mask, causal_attention_mask)
elif attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
# During fast autoregressive decoding, we feed one position at a time,
# and cache the keys and values step by step.
if self.causal and (self.has_variable("cache", "cached_key") or init_cache):
key_states, value_states, attention_attention_mask = self._concatenate_to_cache(
key_states, value_states, query_states, attention_mask
)
# replace masked positions with -10_000
if attention_mask is not None:
mask_value = jnp.finfo(self.dtype).min
attention_mask = jax.lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, mask_value).astype(self.dtype),
)
if position_bias is None:
# compute position bias (only for first layer)
position_bias = self._create_position_bias(
key_states, query_states, attention_mask, init_cache, seq_length, causal_attention_mask_shift
)
if attention_mask is not None:
position_bias = position_bias + attention_mask
# create dropout rng
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
# Softmax(QK^T)
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=position_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
)
# multiply with value states
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
# bring back to (batch_size, seq_length, d_model)
attn_output = self._merge_heads(attn_output)
# apply output matrix
attn_output = self.o(attn_output)
outputs = (attn_output, position_bias)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class FlaxLongT5LocalAttention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.relative_attention_num_buckets = self.config.relative_attention_num_buckets
self.relative_attention_max_distance = self.config.relative_attention_max_distance
self.d_model = self.config.d_model
self.key_value_proj_dim = self.config.d_kv
self.n_heads = self.config.num_heads
self.local_radius = self.config.local_radius
self.block_len = self.local_radius + 1
self.dropout = self.config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
q_init_std = self.config.initializer_factor * ((self.inner_dim * self.key_value_proj_dim) ** -0.5)
kv_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
o_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
self.q = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(q_init_std),
dtype=self.dtype,
)
self.k = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.v = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.o = nn.Dense(
self.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(o_init_std),
dtype=self.dtype,
)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
)
@staticmethod
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0) * num_buckets
relative_position = jnp.abs(relative_position)
else:
relative_position = -jnp.clip(relative_position, a_max=0)
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
jnp.log(relative_position / max_exact) / jnp.log(max_distance / max_exact) * (num_buckets - max_exact)
)
relative_position_if_large = jnp.clip(relative_position_if_large, a_max=num_buckets - 1)
relative_buckets += jnp.where(is_small, relative_position, relative_position_if_large)
return relative_buckets.astype("i4")
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
memory_position = jnp.arange(3 * block_length, dtype="i4")
context_position = memory_position[block_length:-block_length]
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position,
bidirectional=True,
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket)
values = values.transpose((2, 0, 1))[None, None, :, :, :]
return values
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.n_heads, self.key_value_proj_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[0], -1, self.inner_dim)
def _create_position_bias(self, block_len: int, attention_mask: Optional[np.ndarray]) -> np.ndarray:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if self.has_relative_attention_bias:
position_bias = self.compute_bias(block_len)
elif attention_mask is not None:
position_bias = jnp.zeros_like(attention_mask)
else:
position_bias = jnp.zeros((1, 1, self.n_heads, block_len, 3 * block_len), dtype=self.dtype)
return position_bias
def __call__(
self,
hidden_states,
attention_mask=None,
key_value_states=None,
position_bias=None,
output_attentions=False,
deterministic=True,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
batch_size, seq_length = hidden_states.shape[:2]
# q, k, v projections
query_states = self.q(hidden_states) # (batch_size, n_heads, seq_length, dim_per_head)
key_states = self.k(hidden_states) if key_value_states is None else self.k(key_value_states)
value_states = self.v(hidden_states) if key_value_states is None else self.v(key_value_states)
# reshape to (batch_size, seq_length, n_heads, head_dim)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, head_dim)
query_states = _split_into_blocks(query_states, self.block_len, axis=1)
key_states = _split_into_blocks(key_states, self.block_len, axis=1)
value_states = _split_into_blocks(value_states, self.block_len, axis=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_axis=1, sequence_axis=2)
value_states = _concatenate_3_blocks(value_states, block_axis=1, sequence_axis=2)
# counter-act scaling in dot_product_attention_weights function
query_states *= jnp.sqrt(query_states.shape[-1])
if attention_mask is not None:
attention_mask = _get_local_attention_mask(attention_mask, self.block_len)
# replace masked positions with -10_000
attention_mask = jax.lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, -1e10).astype(self.dtype),
)
if position_bias is None:
# compute position bias (only for first layer)
position_bias = self._create_position_bias(self.block_len, attention_mask)
if attention_mask is not None:
position_bias = position_bias + attention_mask.swapaxes(1, 2)
# create dropout rng
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
# Softmax(QK^T)
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=position_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
)
# multiply with value states
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
# bring back to (batch_size, seq_length, d_model)
attn_output = self._merge_heads(attn_output)
attn_output = attn_output[:, :seq_length, :]
# apply output matrix
attn_output = self.o(attn_output)
outputs = (attn_output, position_bias)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class FlaxLongT5TransientGlobalAttention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.relative_attention_num_buckets = self.config.relative_attention_num_buckets
self.relative_attention_max_distance = self.config.relative_attention_max_distance
self.d_model = self.config.d_model
self.key_value_proj_dim = self.config.d_kv
self.n_heads = self.config.num_heads
self.local_radius = self.config.local_radius
self.block_len = self.local_radius + 1
self.global_block_size = self.config.global_block_size
self.dropout = self.config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
q_init_std = self.config.initializer_factor * ((self.inner_dim * self.key_value_proj_dim) ** -0.5)
kv_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
o_init_std = self.config.initializer_factor * (self.inner_dim**-0.5)
self.q = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(q_init_std),
dtype=self.dtype,
)
self.k = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.v = nn.Dense(
self.inner_dim,
use_bias=False,
kernel_init=jax.nn.initializers.normal(kv_init_std),
dtype=self.dtype,
)
self.o = nn.Dense(
self.d_model,
use_bias=False,
kernel_init=jax.nn.initializers.normal(o_init_std),
dtype=self.dtype,
)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
)
# Relativen attention bias & Layer norm for global attention
if self.has_relative_attention_bias:
self.global_relative_attention_bias = nn.Embed(
self.relative_attention_num_buckets,
self.n_heads,
embedding_init=jax.nn.initializers.normal(kv_init_std),
)
self.global_input_layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
@staticmethod
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0) * num_buckets
relative_position = jnp.abs(relative_position)
else:
relative_position = -jnp.clip(relative_position, a_max=0)
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
jnp.log(relative_position / max_exact) / jnp.log(max_distance / max_exact) * (num_buckets - max_exact)
)
relative_position_if_large = jnp.clip(relative_position_if_large, a_max=num_buckets - 1)
relative_buckets += jnp.where(is_small, relative_position, relative_position_if_large)
return relative_buckets.astype("i4")
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
memory_position = jnp.arange(3 * block_length, dtype="i4")
context_position = memory_position[block_length:-block_length]
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position,
bidirectional=True,
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket)
values = values.transpose((2, 0, 1))[None, None, :, :, :]
return values
def compute_side_bias(self, attention_mask: np.ndarray, global_segment_ids: np.ndarray) -> np.ndarray:
# (batch_size, 1, 1, seq_len, global_seq_len)
side_attention_mask = jnp.equal(attention_mask[..., None], global_segment_ids[:, None, :])[:, None, ...]
attention_side_bias = jax.lax.select(
side_attention_mask > 0,
jnp.full(side_attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(side_attention_mask.shape, -1e10).astype(self.dtype),
)
# (batch_size, seq_len, global_seq_len)
side_relative_position = _make_side_relative_position_ids(attention_mask, self.global_block_size)
side_relative_position_bucket = self._relative_position_bucket(
side_relative_position,
bidirectional=True,
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (batch_size, seq_len, global_seq_len, num_heads)
side_bias = self.global_relative_attention_bias(side_relative_position_bucket)
# (batch_size, 1, num_heads, seq_len, global_seq_len)
side_bias = jnp.transpose(side_bias, (0, 3, 1, 2))
# (batch_size, num_heads, seq_len, global_seq_len)
attention_side_bias = attention_side_bias + side_bias
return attention_side_bias
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.n_heads, self.key_value_proj_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[0], -1, self.inner_dim)
def _create_position_bias(self, block_len: int, attention_mask: Optional[np.ndarray]) -> np.ndarray:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if self.has_relative_attention_bias:
position_bias = self.compute_bias(block_len)
elif attention_mask is not None:
position_bias = jnp.zeros_like(attention_mask)
else:
position_bias = jnp.zeros((1, 1, self.n_heads, block_len, 3 * block_len), dtype=self.dtype)
return position_bias
def __call__(
self,
hidden_states,
attention_mask=None,
key_value_states=None,
position_bias=None,
output_attentions=False,
deterministic=True,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
batch_size, seq_length = hidden_states.shape[:2]
# Prepare components for transient-global attention
# Obtain block_ids and global_segment_ids
# global_seq_len := seq_len // self.global_block_size
# shapes: (batch_size, seq_len) & (batch_size, global_seq_len)
block_ids, global_segment_ids = _make_global_fixed_block_ids(
attention_mask if attention_mask is not None else jnp.ones((batch_size, seq_length)),
self.global_block_size,
)
# Create global inputs
_global_seq_len = global_segment_ids.shape[-1]
global_inputs = _create_global_aggregates(hidden_states, block_ids, _global_seq_len)
global_inputs = self.global_input_layer_norm(global_inputs)
# q, k, v projections
query_states = self.q(hidden_states) # (batch_size, n_heads, seq_length, dim_per_head)
key_states = self.k(hidden_states) if key_value_states is None else self.k(key_value_states)
value_states = self.v(hidden_states) if key_value_states is None else self.v(key_value_states)
# reshape to (batch_size, seq_length, n_heads, head_dim)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# Get global/side key/value_states
side_key_states = self.k(global_inputs)
side_value_states = self.v(global_inputs)
# reshape to (batch_size, global_seq_len, n_heads, head_dim)
side_key_states = self._split_heads(side_key_states)
side_value_states = self._split_heads(side_value_states)
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, head_dim)
query_states = _split_into_blocks(query_states, self.block_len, axis=1)
key_states = _split_into_blocks(key_states, self.block_len, axis=1)
value_states = _split_into_blocks(value_states, self.block_len, axis=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_axis=1, sequence_axis=2)
value_states = _concatenate_3_blocks(value_states, block_axis=1, sequence_axis=2)
# Tile side inputs across local key/value blocks
# New shape: (batch_size, num_blocks, global_seq_len, n_heads, dim_per_head)
reps = [1] * (side_key_states.ndim + 1)
reps[1] = key_states.shape[1]
side_key_states = jnp.tile(side_key_states[:, None, ...], reps)
side_value_states = jnp.tile(side_value_states[:, None, ...], reps)
# Concatenate "local" and "side"/"global" key/value states to allow each token to attend global aggregated ones
# New shape: (batch_size, num_blocks, 3 * block_len + global_seq_len, n_heads, dim_per_head)
key_states = jnp.concatenate((key_states, side_key_states), axis=2)
value_states = jnp.concatenate((value_states, side_value_states), axis=2)
# counter-act scaling in dot_product_attention_weights function
query_states *= jnp.sqrt(query_states.shape[-1])
if attention_mask is not None:
local_attention_mask = _get_local_attention_mask(attention_mask, self.block_len)
local_attention_mask = jax.lax.select(
local_attention_mask > 0,
jnp.full(local_attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(local_attention_mask.shape, -1e10).astype(self.dtype),
)
else:
local_attention_mask = None
if position_bias is None:
# compute position bias (only for first layer)
position_bias = self._create_position_bias(self.block_len, attention_mask)
if local_attention_mask is not None:
position_bias = position_bias + local_attention_mask.swapaxes(1, 2)
# Calculate global/side bias - shape: # (batch_size, num_heads, seq_len, global_seq_len)
if attention_mask is None:
attention_mask = jnp.ones((batch_size, seq_length))
side_position_bias = self.compute_side_bias(attention_mask, global_segment_ids)
side_position_bias = _split_into_blocks(side_position_bias, self.block_len, axis=-2)
side_position_bias = jnp.swapaxes(side_position_bias, 1, 2)
position_bias = jnp.concatenate((position_bias, side_position_bias), axis=-1)
# create dropout rng
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
# Softmax(QK^T)
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=position_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
)
# multiply with value states
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
# bring back to (batch_size, seq_length, d_model)
attn_output = self._merge_heads(attn_output)
attn_output = attn_output[:, :seq_length, :]
# apply output matrix
attn_output = self.o(attn_output)
outputs = (attn_output, position_bias)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class FlaxLongT5LayerLocalSelfAttention(nn.Module):
"""Local self attention used in encoder"""
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.LocalSelfAttention = FlaxLongT5LocalAttention(
self.config, has_relative_attention_bias=self.has_relative_attention_bias, dtype=self.dtype
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
**kwargs: Any, # to accept init_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.LocalSelfAttention(
normed_hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class FlaxLongT5LayerTransientGlobalSelfAttention(nn.Module):
"""Transient-Global self attention used in encoder"""
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.TransientGlobalSelfAttention = FlaxLongT5TransientGlobalAttention(
self.config, has_relative_attention_bias=self.has_relative_attention_bias, dtype=self.dtype
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
**kwargs: Any, # to accept init_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.TransientGlobalSelfAttention(
normed_hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerSelfAttention with T5->LongT5
class FlaxLongT5LayerSelfAttention(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.SelfAttention = FlaxLongT5Attention(
self.config,
has_relative_attention_bias=self.has_relative_attention_bias,
causal=self.config.causal,
dtype=self.dtype,
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
init_cache=False,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.SelfAttention(
normed_hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
init_cache=init_cache,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerCrossAttention with T5->LongT5
class FlaxLongT5LayerCrossAttention(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.EncDecAttention = FlaxLongT5Attention(
self.config, has_relative_attention_bias=False, causal=False, dtype=self.dtype
)
self.layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
hidden_states,
key_value_states,
attention_mask=None,
position_bias=None,
output_attentions=False,
deterministic=True,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.EncDecAttention(
normed_hidden_states,
attention_mask=attention_mask,
key_value_states=key_value_states,
position_bias=position_bias,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0], deterministic=deterministic)
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class FlaxLongT5Block(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.causal = self.config.causal
if self.causal:
attention_layer = FlaxLongT5LayerSelfAttention
elif self.config.encoder_attention_type == "local":
attention_layer = FlaxLongT5LayerLocalSelfAttention
elif self.config.encoder_attention_type == "transient-global":
attention_layer = FlaxLongT5LayerTransientGlobalSelfAttention
else:
raise ValueError(
"For encoder attention mechanism, either `local` or `transient-global` attention type is expected, "
f"but got {self.config.encoder_attention_type}."
)
self.layer = (
attention_layer(
self.config,
has_relative_attention_bias=self.has_relative_attention_bias,
name=str(0),
dtype=self.dtype,
),
)
feed_forward_index = 1
if self.causal:
self.layer += (FlaxLongT5LayerCrossAttention(self.config, name=str(1), dtype=self.dtype),)
feed_forward_index += 1
self.layer += (FlaxLongT5LayerFF(self.config, name=str(feed_forward_index), dtype=self.dtype),)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Block.__call__ with T5->LongT5
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
encoder_decoder_position_bias=None,
output_attentions=False,
return_dict=True,
deterministic=True,
init_cache=False,
):
self_attention_outputs = self.layer[0](
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
init_cache=init_cache,
)
hidden_states = self_attention_outputs[0]
attention_outputs = self_attention_outputs[1:] # Keep self-attention outputs and relative position weights
do_cross_attention = self.causal and encoder_hidden_states is not None
if do_cross_attention:
cross_attention_outputs = self.layer[1](
hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
position_bias=encoder_decoder_position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = cross_attention_outputs[0]
# Keep cross-attention outputs and relative position weights
attention_outputs = attention_outputs + cross_attention_outputs[1:]
# Apply Feed Forward layer
hidden_states = self.layer[-1](hidden_states, deterministic=deterministic)
outputs = (hidden_states,)
outputs = outputs + attention_outputs
# returns hidden-states, present_key_value_states, (self-attention position bias), (self-attention weights),
# (cross-attention position bias), (cross-attention weights)
return outputs
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5LayerCollection with T5->LongT5
class FlaxLongT5LayerCollection(nn.Module):
config: LongT5Config
has_relative_attention_bias: bool
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.layer = FlaxLongT5Block(
self.config, has_relative_attention_bias=self.has_relative_attention_bias, dtype=self.dtype
)
def __call__(
self,
hidden_states,
attention_mask=None,
position_bias=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
encoder_decoder_position_bias=None,
output_attentions=False,
deterministic=True,
init_cache=False,
):
return self.layer(
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
encoder_decoder_position_bias=encoder_decoder_position_bias,
output_attentions=output_attentions,
deterministic=deterministic,
init_cache=init_cache,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5BlockCollection with T5->LongT5
class FlaxLongT5BlockCollection(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
self.causal = self.config.causal
if self.gradient_checkpointing:
FlaxLongT5CheckpointLayer = remat(FlaxLongT5LayerCollection, static_argnums=(6, 7, 8))
self.blocks = [
FlaxLongT5CheckpointLayer(
self.config,
has_relative_attention_bias=(i == 0),
dtype=self.dtype,
name=str(i),
)
for i in range(self.config.num_layers)
]
else:
self.blocks = [
FlaxLongT5LayerCollection(
self.config,
has_relative_attention_bias=(i == 0),
dtype=self.dtype,
name=str(i),
)
for i in range(self.config.num_layers)
]
def __call__(
self,
hidden_states=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
output_attentions: bool = False,
output_hidden_states: bool = False,
deterministic: bool = True,
init_cache: bool = False,
):
# Prepare head mask if needed
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
all_cross_attentions = () if (output_attentions and self.causal) else None
position_bias = None
encoder_decoder_position_bias = None
for i, layer_module in enumerate(self.blocks):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states,
attention_mask,
position_bias,
encoder_hidden_states,
encoder_attention_mask,
encoder_decoder_position_bias,
output_attentions,
deterministic,
init_cache,
)
hidden_states = layer_outputs[0]
# We share the position biases between the layers - the first layer store them
# layer_outputs = hidden-states, key-value-states (self-attention position bias), (self-attention weights),
# (cross-attention position bias), (cross-attention weights)
position_bias = layer_outputs[1]
if self.causal and encoder_hidden_states is not None:
encoder_decoder_position_bias = layer_outputs[3 if output_attentions else 2]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[2],)
if self.causal:
all_cross_attentions = all_cross_attentions + (layer_outputs[4],)
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Stack with T5->LongT5
class FlaxLongT5Stack(nn.Module):
config: LongT5Config
embed_tokens: nn.Embed
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
self.causal = self.config.causal
self.block = FlaxLongT5BlockCollection(
self.config, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.final_layer_norm = FlaxLongT5LayerNorm(
self.config.d_model, eps=self.config.layer_norm_epsilon, dtype=self.dtype
)
self.dropout = nn.Dropout(self.config.dropout_rate)
def __call__(
self,
input_ids=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
init_cache: bool = False,
):
hidden_states = self.embed_tokens(input_ids)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
outputs = self.block(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
deterministic=deterministic,
init_cache=init_cache,
)
hidden_states = outputs[0]
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
# Add last layer
all_hidden_states = None
if output_hidden_states:
all_hidden_states = outputs.hidden_states
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
if output_hidden_states:
return (
hidden_states,
all_hidden_states,
) + outputs[2:]
return (hidden_states,) + outputs[1:]
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
LONGT5_ENCODE_INPUTS_DOCSTRING = r"""
Args:
input_ids (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
LONGT5_DECODE_INPUTS_DOCSTRING = r"""
Args:
decoder_input_ids (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
For training, `decoder_input_ids` should be provided.
encoder_outputs (`tuple(tuple(jnp.ndarray)`):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
encoder_attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_attention_mask (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
If you want to change padding behavior, you should modify to your needs. See diagram 1 in [the
paper](https://arxiv.org/abs/1910.13461) for more information on the default strategy.
past_key_values (`Dict[str, np.ndarray]`, *optional*, returned by `init_cache` or when passing previous `past_key_values`):
Dictionary of pre-computed hidden-states (key and values in the attention blocks) that can be used for fast
auto-regressive decoding. Pre-computed key and value hidden-states are of shape *[batch_size, max_length]*.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
LONGT5_INPUTS_DOCSTRING = r"""
Args:
input_ids (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
[What are input IDs?](../glossary#input-ids)
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
LONGT5 uses the `pad_token_id` as the starting token for `decoder_input_ids` generation. If
`past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
To know more on how to prepare `decoder_input_ids` for pretraining take a look at [LONGT5
Training](./longt5#training).
decoder_attention_mask (`jnp.ndarray` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
encoder_outputs (`tuple(tuple(jnp.ndarray)`, *optional*):
Tuple consists of (`last_hidden_state`, `optional`: *hidden_states*, `optional`: *attentions*)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)` is a sequence of hidden states at
the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(jnp.ndarray))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class FlaxLongT5PreTrainedModel(FlaxPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = LongT5Config
base_model_prefix = "transformer"
module_class: nn.Module = None
def __init__(
self,
config: LongT5Config,
input_shape: Tuple[int] = (1, 1),
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def enable_gradient_checkpointing(self):
self._module = self.module_class(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=True,
)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
input_ids = jnp.zeros(input_shape, dtype="i4")
attention_mask = jnp.ones_like(input_ids)
decoder_input_ids = jnp.ones_like(input_ids)
decoder_attention_mask = jnp.ones_like(input_ids)
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
random_params = self.module.init(
rngs,
input_ids,
attention_mask,
decoder_input_ids,
decoder_attention_mask,
)["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
@add_start_docstrings_to_model_forward(LONGT5_INPUTS_DOCSTRING)
def __call__(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
decoder_input_ids: jnp.ndarray = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if decoder_input_ids is None:
raise ValueError(
"Make sure to provide both `input_ids` and `decoder_input_ids`. `decoder_input_ids` is not passed"
" here."
)
# prepare encoder inputs
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
# prepare decoder inputs
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones_like(decoder_input_ids)
# Handle any PRNG if needed
rngs = {"dropout": dropout_rng} if dropout_rng is not None else {}
return self.module.apply(
{"params": params or self.params},
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
)
def init_cache(self, batch_size, max_length, encoder_outputs):
r"""
Args:
batch_size (`int`):
batch_size used for fast auto-regressive decoding. Defines the batch size of the initialized cache.
max_length (`int`):
maximum possible length for auto-regressive decoding. Defines the sequence length of the initialized
cache.
encoder_outputs (`Union[FlaxBaseModelOutput, tuple(tuple(jnp.ndarray)]`):
`encoder_outputs` consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*:
`attentions`). `last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*)
is a sequence of hidden-states at the output of the last layer of the encoder. Used in the
cross-attention of the decoder.
"""
# init input variables to retrieve cache
decoder_input_ids = jnp.ones((batch_size, max_length), dtype="i4")
decoder_attention_mask = jnp.ones_like(decoder_input_ids)
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, **kwargs):
decoder_module = module._get_decoder_module()
return decoder_module(
decoder_input_ids,
decoder_attention_mask,
**kwargs,
)
init_variables = self.module.init(
jax.random.PRNGKey(0),
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
init_cache=True,
method=_decoder_forward, # we only need to call the decoder to init the cache
)
return unfreeze(init_variables["cache"])
@add_start_docstrings(LONGT5_ENCODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxBaseModelOutput, config_class=LongT5Config)
def encode(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> text = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, return_tensors="np")
>>> encoder_outputs = model.encode(**inputs)
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
def _encoder_forward(module, input_ids, attention_mask, **kwargs):
encode_module = module._get_encoder_module()
return encode_module(input_ids, attention_mask, **kwargs)
return self.module.apply(
{"params": params or self.params},
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
method=_encoder_forward,
)
@add_start_docstrings(LONGT5_DECODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxBaseModelOutputWithPastAndCrossAttentions, config_class=LongT5Config)
def decode(
self,
decoder_input_ids,
encoder_outputs,
encoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
past_key_values: dict = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> import jax.numpy as jnp
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> text = "My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, return_tensors="np")
>>> encoder_outputs = model.encode(**inputs)
>>> decoder_start_token_id = model.config.decoder_start_token_id
>>> decoder_input_ids = jnp.ones((inputs.input_ids.shape[0], 1), dtype="i4") * decoder_start_token_id
>>> outputs = model.decode(decoder_input_ids, encoder_outputs)
>>> logits = outputs.logits
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
encoder_hidden_states = encoder_outputs[0]
if encoder_attention_mask is None:
batch_size, sequence_length = encoder_hidden_states.shape[:2]
encoder_attention_mask = jnp.ones((batch_size, sequence_length))
batch_size, sequence_length = decoder_input_ids.shape
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones((batch_size, sequence_length))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be
# passed down to ensure cache is used. It has to be made sure that cache is marked as mutable so that
# it can be changed by FlaxLongT5Attention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, **kwargs):
decoder_module = module._get_decoder_module()
return decoder_module(
decoder_input_ids,
decoder_attention_mask,
**kwargs,
)
outputs = self.module.apply(
inputs,
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=jnp.array(encoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
mutable=mutable,
method=_decoder_forward,
)
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs, past = outputs
outputs["past_key_values"] = unfreeze(past["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs, past = outputs
outputs = outputs[:1] + (unfreeze(past["cache"]),) + outputs[1:]
return outputs
LONGT5_START_DOCSTRING = r"""
The LongT5 model was proposed in [LongT5: Efficient Text-To-Text Transformer for Long
Sequences](https://arxiv.org/abs/2112.07916) by Mandy Guo, Joshua Ainslie, David Uthus, Santiago Ontanon, Jianmo
Ni, Yun-Hsuan Sung and Yinfei Yang. It's an encoder-decoder transformer pre-trained in a text-to-text denoising
generative setting. LongT5 model is an extension of T5 model, and it enables using one of the two different
efficient attention mechanisms - (1) Local attention, or (2) Transient-Global attention.
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a Flax Linen
[flax.nn.Module](https://flax.readthedocs.io/en/latest/_autosummary/flax.nn.module.html) subclass. Use it as a
regular Flax Module and refer to the Flax documentation for all matter related to general usage and behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`LongT5Config`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
@add_start_docstrings(
"The bare LONGT5 Model transformer outputting raw hidden-stateswithout any specific head on top.",
LONGT5_START_DOCSTRING,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Module with T5->LongT5
class FlaxLongT5Module(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def _get_encoder_module(self):
return self.encoder
def _get_decoder_module(self):
return self.decoder
def setup(self):
self.shared = nn.Embed(
self.config.vocab_size,
self.config.d_model,
embedding_init=jax.nn.initializers.normal(self.config.initializer_factor * 1.0),
dtype=self.dtype,
)
encoder_config = copy.deepcopy(self.config)
encoder_config.causal = False
self.encoder = FlaxLongT5Stack(
encoder_config,
embed_tokens=self.shared,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
decoder_config = copy.deepcopy(self.config)
decoder_config.causal = True
decoder_config.num_layers = self.config.num_decoder_layers
self.decoder = FlaxLongT5Stack(
decoder_config,
embed_tokens=self.shared,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
def __call__(
self,
input_ids=None,
attention_mask=None,
decoder_input_ids=None,
decoder_attention_mask=None,
encoder_outputs=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
deterministic: bool = True,
):
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode if needed (training, first prediction pass)
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return FlaxSeq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5Model with T5->LongT5
class FlaxLongT5Model(FlaxLongT5PreTrainedModel):
module_class = FlaxLongT5Module
append_call_sample_docstring(FlaxLongT5Model, _CHECKPOINT_FOR_DOC, FlaxSeq2SeqModelOutput, _CONFIG_FOR_DOC)
FLAX_LONGT5_MODEL_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5Model
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5Model.from_pretrained("google/long-t5-local-base")
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="np"
... ).input_ids
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="np").input_ids
>>> # forward pass
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```
"""
overwrite_call_docstring(FlaxLongT5Model, LONGT5_INPUTS_DOCSTRING + FLAX_LONGT5_MODEL_DOCSTRING)
append_replace_return_docstrings(FlaxLongT5Model, output_type=FlaxSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
@add_start_docstrings("""LONGT5 Model with a `language modeling` head on top.""", LONGT5_START_DOCSTRING)
# Copied from transformers.models.t5.modeling_flax_t5.FlaxT5ForConditionalGenerationModule with T5->LongT5
class FlaxLongT5ForConditionalGenerationModule(nn.Module):
config: LongT5Config
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def _get_encoder_module(self):
return self.encoder
def _get_decoder_module(self):
return self.decoder
def setup(self):
self.model_dim = self.config.d_model
self.shared = nn.Embed(
self.config.vocab_size,
self.config.d_model,
embedding_init=jax.nn.initializers.normal(self.config.initializer_factor),
dtype=self.dtype,
)
encoder_config = copy.deepcopy(self.config)
encoder_config.causal = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = FlaxLongT5Stack(
encoder_config, self.shared, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
decoder_config = copy.deepcopy(self.config)
decoder_config.causal = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = self.config.num_decoder_layers
self.decoder = FlaxLongT5Stack(
decoder_config, self.shared, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.lm_head = nn.Dense(
self.config.vocab_size,
use_bias=False,
kernel_init=jax.nn.initializers.normal(self.config.initializer_factor),
dtype=self.dtype,
)
def __call__(
self,
input_ids=None,
attention_mask=None,
decoder_input_ids=None,
decoder_attention_mask=None,
encoder_outputs=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
deterministic: bool = True,
):
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Encode
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
hidden_states = encoder_outputs[0]
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
sequence_output = decoder_outputs[0]
if self.config.tie_word_embeddings:
# Rescale output before projecting on vocab
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/transformer.py#L586
sequence_output = sequence_output * (self.model_dim**-0.5)
if self.config.tie_word_embeddings:
shared_embedding = self.shared.variables["params"]["embedding"]
lm_logits = self.lm_head.apply({"params": {"kernel": shared_embedding.T}}, sequence_output)
else:
lm_logits = self.lm_head(sequence_output)
if not return_dict:
return (lm_logits,) + decoder_outputs[1:] + encoder_outputs
return FlaxSeq2SeqLMOutput(
logits=lm_logits,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
class FlaxLongT5ForConditionalGeneration(FlaxLongT5PreTrainedModel):
module_class = FlaxLongT5ForConditionalGenerationModule
@add_start_docstrings(LONGT5_DECODE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=FlaxCausalLMOutputWithCrossAttentions, config_class=LongT5Config)
def decode(
self,
decoder_input_ids,
encoder_outputs,
encoder_attention_mask: Optional[jnp.ndarray] = None,
decoder_attention_mask: Optional[jnp.ndarray] = None,
past_key_values: dict = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
train: bool = False,
params: dict = None,
dropout_rng: PRNGKey = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> import jax.numpy as jnp
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> text = "summarize: My friends are cool but they eat too many carbs."
>>> inputs = tokenizer(text, return_tensors="np")
>>> encoder_outputs = model.encode(**inputs)
>>> decoder_start_token_id = model.config.decoder_start_token_id
>>> decoder_input_ids = jnp.ones((inputs.input_ids.shape[0], 1), dtype="i4") * decoder_start_token_id
>>> outputs = model.decode(decoder_input_ids, encoder_outputs)
>>> logits = outputs.logits
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
encoder_hidden_states = encoder_outputs[0]
if encoder_attention_mask is None:
batch_size, sequence_length = encoder_hidden_states.shape[:2]
encoder_attention_mask = jnp.ones((batch_size, sequence_length))
batch_size, sequence_length = decoder_input_ids.shape
if decoder_attention_mask is None:
decoder_attention_mask = jnp.ones((batch_size, sequence_length))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be
# passed down to ensure cache is used. It has to be made sure that cache is marked as mutable so that
# it can be changed by FlaxLongT5Attention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
def _decoder_forward(module, decoder_input_ids, decoder_attention_mask, **kwargs):
decoder_module = module._get_decoder_module()
decoder_outputs = decoder_module(
decoder_input_ids,
decoder_attention_mask,
**kwargs,
)
sequence_output = decoder_outputs[0]
if self.config.tie_word_embeddings:
# Rescale output before projecting on vocab
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/transformer.py#L586
sequence_output = sequence_output * (self.config.d_model**-0.5)
if self.config.tie_word_embeddings:
shared_embedding = module.shared.variables["params"]["embedding"]
lm_logits = module.lm_head.apply({"params": {"kernel": shared_embedding.T}}, sequence_output)
else:
lm_logits = module.lm_head(sequence_output)
return lm_logits, decoder_outputs
outputs = self.module.apply(
inputs,
decoder_input_ids=jnp.array(decoder_input_ids, dtype="i4"),
decoder_attention_mask=jnp.array(decoder_attention_mask, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=jnp.array(encoder_attention_mask, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=not train,
rngs=rngs,
mutable=mutable,
method=_decoder_forward,
)
if past_key_values is None:
lm_logits, decoder_outputs = outputs
else:
(lm_logits, decoder_outputs), past = outputs
if return_dict:
outputs = FlaxCausalLMOutputWithCrossAttentions(
logits=lm_logits,
hidden_states=decoder_outputs.hidden_states,
attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
)
else:
outputs = (lm_logits,) + decoder_outputs[1:]
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs["past_key_values"] = unfreeze(past["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs = outputs[:1] + (unfreeze(past["cache"]),) + outputs[1:]
return outputs
def prepare_inputs_for_generation(
self,
decoder_input_ids,
max_length,
attention_mask: Optional[jnp.DeviceArray] = None,
decoder_attention_mask: Optional[jnp.DeviceArray] = None,
encoder_outputs=None,
**kwargs,
):
# initializing the cache
batch_size, seq_length = decoder_input_ids.shape
past_key_values = self.init_cache(batch_size, max_length, encoder_outputs)
# Note that usually one would have to put 0's in the attention_mask for x > input_ids.shape[-1] and x < cache_length.
# But since the decoder uses a causal mask, those positions are masked anyways.
# Thus we can create a single static attention_mask here, which is more efficient for compilation
extended_attention_mask = jnp.ones((batch_size, max_length), dtype="i4")
if decoder_attention_mask is not None:
extended_attention_mask = jax.lax.dynamic_update_slice(
extended_attention_mask, decoder_attention_mask, (0, 0)
)
return {
"past_key_values": past_key_values,
"encoder_outputs": encoder_outputs,
"encoder_attention_mask": attention_mask,
"decoder_attention_mask": extended_attention_mask,
}
def update_inputs_for_generation(self, model_outputs, model_kwargs):
model_kwargs["past_key_values"] = model_outputs.past_key_values
return model_kwargs
FLAX_LONGT5_CONDITIONAL_GENERATION_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxLongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("t5-base")
>>> model = FlaxLongT5ForConditionalGeneration.from_pretrained("google/long-t5-local-base")
>>> ARTICLE_TO_SUMMARIZE = "summarize: My friends are cool but they eat too many carbs."
>>> inputs = tokenizer([ARTICLE_TO_SUMMARIZE], return_tensors="np")
>>> # Generate Summary
>>> summary_ids = model.generate(inputs["input_ids"]).sequences
>>> print(tokenizer.decode(summary_ids[0], skip_special_tokens=True, clean_up_tokenization_spaces=False))
```
"""
overwrite_call_docstring(
FlaxLongT5ForConditionalGeneration, LONGT5_INPUTS_DOCSTRING + FLAX_LONGT5_CONDITIONAL_GENERATION_DOCSTRING
)
append_replace_return_docstrings(
FlaxLongT5ForConditionalGeneration, output_type=FlaxSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 11,089 | src/transformers/models/longt5/convert_longt5x_checkpoint_to_flax.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert T5/LongT5X checkpoints from the original repository to JAX/FLAX model. This script is an extension of
'src/transformers/models/t5/convert_t5x_checkpoint_to_flax.
"""
import argparse
from t5x import checkpoints
from transformers import AutoConfig, FlaxAutoModelForSeq2SeqLM
def convert_t5x_checkpoint_to_flax(t5x_checkpoint_path, config_name, flax_dump_folder_path):
config = AutoConfig.from_pretrained(config_name)
flax_model = FlaxAutoModelForSeq2SeqLM.from_config(config=config)
t5x_model = checkpoints.load_t5x_checkpoint(t5x_checkpoint_path)
split_mlp_wi = "wi_0" in t5x_model["target"]["encoder"]["layers_0"]["mlp"]
if config.model_type == "t5":
encoder_attn_name = "SelfAttention"
if config.model_type == "longt5" and config.encoder_attention_type == "local":
encoder_attn_name = "LocalSelfAttention"
elif config.model_type == "longt5" and config.encoder_attention_type == "transient-global":
encoder_attn_name = "TransientGlobalSelfAttention"
else:
raise ValueError(
"Given config is expected to have `model_type='t5'`, or `model_type='longt5` with `encoder_attention_type`"
" attribute with a value from ['local', 'transient-global]."
)
# Encoder
for layer_index in range(config.num_layers):
layer_name = f"layers_{str(layer_index)}"
# Self-Attention
t5x_attention_key = t5x_model["target"]["encoder"][layer_name]["attention"]["key"]["kernel"]
t5x_attention_out = t5x_model["target"]["encoder"][layer_name]["attention"]["out"]["kernel"]
t5x_attention_query = t5x_model["target"]["encoder"][layer_name]["attention"]["query"]["kernel"]
t5x_attention_value = t5x_model["target"]["encoder"][layer_name]["attention"]["value"]["kernel"]
# Global input layer norm
if config.model_type == "longt5" and config.encoder_attention_type == "transient-global":
t5x_global_layer_norm = t5x_model["target"]["encoder"][layer_name]["attention"]["T5LayerNorm_0"]["scale"]
# Layer Normalization
t5x_attention_layer_norm = t5x_model["target"]["encoder"][layer_name]["pre_attention_layer_norm"]["scale"]
if split_mlp_wi:
t5x_mlp_wi_0 = t5x_model["target"]["encoder"][layer_name]["mlp"]["wi_0"]["kernel"]
t5x_mlp_wi_1 = t5x_model["target"]["encoder"][layer_name]["mlp"]["wi_1"]["kernel"]
else:
t5x_mlp_wi = t5x_model["target"]["encoder"][layer_name]["mlp"]["wi"]["kernel"]
t5x_mlp_wo = t5x_model["target"]["encoder"][layer_name]["mlp"]["wo"]["kernel"]
# Layer Normalization
t5x_mlp_layer_norm = t5x_model["target"]["encoder"][layer_name]["pre_mlp_layer_norm"]["scale"]
# Assigning
flax_model_encoder_layer_block = flax_model.params["encoder"]["block"][str(layer_index)]["layer"]
flax_model_encoder_layer_block["0"][encoder_attn_name]["k"]["kernel"] = t5x_attention_key
flax_model_encoder_layer_block["0"][encoder_attn_name]["o"]["kernel"] = t5x_attention_out
flax_model_encoder_layer_block["0"][encoder_attn_name]["q"]["kernel"] = t5x_attention_query
flax_model_encoder_layer_block["0"][encoder_attn_name]["v"]["kernel"] = t5x_attention_value
flax_model_encoder_layer_block["0"]["layer_norm"]["weight"] = t5x_attention_layer_norm
# Global input layer norm
if config.model_type == "longt5" and config.encoder_attention_type == "transient-global":
flax_model_encoder_layer_block["0"][encoder_attn_name]["global_input_layer_norm"][
"weight"
] = t5x_global_layer_norm
if split_mlp_wi:
flax_model_encoder_layer_block["1"]["DenseReluDense"]["wi_0"]["kernel"] = t5x_mlp_wi_0
flax_model_encoder_layer_block["1"]["DenseReluDense"]["wi_1"]["kernel"] = t5x_mlp_wi_1
else:
flax_model_encoder_layer_block["1"]["DenseReluDense"]["wi"]["kernel"] = t5x_mlp_wi
flax_model_encoder_layer_block["1"]["DenseReluDense"]["wo"]["kernel"] = t5x_mlp_wo
flax_model_encoder_layer_block["1"]["layer_norm"]["weight"] = t5x_mlp_layer_norm
flax_model.params["encoder"]["block"][str(layer_index)]["layer"] = flax_model_encoder_layer_block
# Only for layer 0:
t5x_encoder_rel_embedding = t5x_model["target"]["encoder"]["relpos_bias"]["rel_embedding"].T
flax_model.params["encoder"]["block"]["0"]["layer"]["0"][encoder_attn_name]["relative_attention_bias"][
"embedding"
] = t5x_encoder_rel_embedding
# Side/global relative position_bias + layer norm
if config.model_type == "longt5" and config.encoder_attention_type == "transient-global":
t5x_encoder_global_rel_embedding = t5x_model["target"]["encoder"]["side_relpos_bias"]["rel_embedding"].T
flax_model.params["encoder"]["block"]["0"]["layer"]["0"][encoder_attn_name]["global_relative_attention_bias"][
"embedding"
] = t5x_encoder_global_rel_embedding
# Assigning
t5x_encoder_norm = t5x_model["target"]["encoder"]["encoder_norm"]["scale"]
flax_model.params["encoder"]["final_layer_norm"]["weight"] = t5x_encoder_norm
# Decoder
for layer_index in range(config.num_layers):
layer_name = f"layers_{str(layer_index)}"
# Self-Attention
t5x_attention_key = t5x_model["target"]["decoder"][layer_name]["self_attention"]["key"]["kernel"]
t5x_attention_out = t5x_model["target"]["decoder"][layer_name]["self_attention"]["out"]["kernel"]
t5x_attention_query = t5x_model["target"]["decoder"][layer_name]["self_attention"]["query"]["kernel"]
t5x_attention_value = t5x_model["target"]["decoder"][layer_name]["self_attention"]["value"]["kernel"]
# Layer Normalization
t5x_pre_attention_layer_norm = t5x_model["target"]["decoder"][layer_name]["pre_self_attention_layer_norm"][
"scale"
]
# Encoder-Decoder-Attention
t5x_enc_dec_attention_module = t5x_model["target"]["decoder"][layer_name]["encoder_decoder_attention"]
t5x_enc_dec_attention_key = t5x_enc_dec_attention_module["key"]["kernel"]
t5x_enc_dec_attention_out = t5x_enc_dec_attention_module["out"]["kernel"]
t5x_enc_dec_attention_query = t5x_enc_dec_attention_module["query"]["kernel"]
t5x_enc_dec_attention_value = t5x_enc_dec_attention_module["value"]["kernel"]
# Layer Normalization
t5x_cross_layer_norm = t5x_model["target"]["decoder"][layer_name]["pre_cross_attention_layer_norm"]["scale"]
# MLP
if split_mlp_wi:
t5x_mlp_wi_0 = t5x_model["target"]["decoder"][layer_name]["mlp"]["wi_0"]["kernel"]
t5x_mlp_wi_1 = t5x_model["target"]["decoder"][layer_name]["mlp"]["wi_1"]["kernel"]
else:
t5x_mlp_wi = t5x_model["target"]["decoder"][layer_name]["mlp"]["wi"]["kernel"]
t5x_mlp_wo = t5x_model["target"]["decoder"][layer_name]["mlp"]["wo"]["kernel"]
# Layer Normalization
tx5_mlp_layer_norm = t5x_model["target"]["decoder"][layer_name]["pre_mlp_layer_norm"]["scale"]
# Assigning
flax_model_decoder_layer_block = flax_model.params["decoder"]["block"][str(layer_index)]["layer"]
flax_model_decoder_layer_block["0"]["SelfAttention"]["k"]["kernel"] = t5x_attention_key
flax_model_decoder_layer_block["0"]["SelfAttention"]["o"]["kernel"] = t5x_attention_out
flax_model_decoder_layer_block["0"]["SelfAttention"]["q"]["kernel"] = t5x_attention_query
flax_model_decoder_layer_block["0"]["SelfAttention"]["v"]["kernel"] = t5x_attention_value
flax_model_decoder_layer_block["0"]["layer_norm"]["weight"] = t5x_pre_attention_layer_norm
flax_model_decoder_layer_block["1"]["EncDecAttention"]["k"]["kernel"] = t5x_enc_dec_attention_key
flax_model_decoder_layer_block["1"]["EncDecAttention"]["o"]["kernel"] = t5x_enc_dec_attention_out
flax_model_decoder_layer_block["1"]["EncDecAttention"]["q"]["kernel"] = t5x_enc_dec_attention_query
flax_model_decoder_layer_block["1"]["EncDecAttention"]["v"]["kernel"] = t5x_enc_dec_attention_value
flax_model_decoder_layer_block["1"]["layer_norm"]["weight"] = t5x_cross_layer_norm
if split_mlp_wi:
flax_model_decoder_layer_block["2"]["DenseReluDense"]["wi_0"]["kernel"] = t5x_mlp_wi_0
flax_model_decoder_layer_block["2"]["DenseReluDense"]["wi_1"]["kernel"] = t5x_mlp_wi_1
else:
flax_model_decoder_layer_block["2"]["DenseReluDense"]["wi"]["kernel"] = t5x_mlp_wi
flax_model_decoder_layer_block["2"]["DenseReluDense"]["wo"]["kernel"] = t5x_mlp_wo
flax_model_decoder_layer_block["2"]["layer_norm"]["weight"] = tx5_mlp_layer_norm
flax_model.params["decoder"]["block"][str(layer_index)]["layer"] = flax_model_decoder_layer_block
# Decoder Normalization
tx5_decoder_norm = t5x_model["target"]["decoder"]["decoder_norm"]["scale"]
flax_model.params["decoder"]["final_layer_norm"]["weight"] = tx5_decoder_norm
# Only for layer 0:
t5x_decoder_rel_embedding = t5x_model["target"]["decoder"]["relpos_bias"]["rel_embedding"].T
flax_model.params["decoder"]["block"]["0"]["layer"]["0"]["SelfAttention"]["relative_attention_bias"][
"embedding"
] = t5x_decoder_rel_embedding
# Token Embeddings
tx5_token_embeddings = t5x_model["target"]["token_embedder"]["embedding"]
flax_model.params["shared"]["embedding"] = tx5_token_embeddings
# LM Head (only in v1.1 and LongT5 checkpoints)
if "logits_dense" in t5x_model["target"]["decoder"]:
flax_model.params["lm_head"]["kernel"] = t5x_model["target"]["decoder"]["logits_dense"]["kernel"]
flax_model.save_pretrained(flax_dump_folder_path)
print("T5X Model was sucessfully converted!")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--t5x_checkpoint_path", default=None, type=str, required=True, help="Path the T5X checkpoint."
)
parser.add_argument("--config_name", default=None, type=str, required=True, help="Config name of LongT5/T5 model.")
parser.add_argument(
"--flax_dump_folder_path", default=None, type=str, required=True, help="Path to the output FLAX model."
)
args = parser.parse_args()
convert_t5x_checkpoint_to_flax(args.t5x_checkpoint_path, args.config_name, args.flax_dump_folder_path)
|
233zzh/TitanDataOperationSystem | 1,023 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/terminal/function/ResolutionFunction.scala | package cn.edu.neu.titan.titanSpark.migration.terminal.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.terminal.function.ModelFunction.migrate
import cn.edu.neu.titan.titanSpark.migration.terminal.{colDNU, colIncrease, colLaunch, colStart, executeMigrate, tbNewSource, tbStartSource}
/**
* Created by IntelliJ IDEA.
*
* @Author: Wang Kuo
* @Email: 2383536228@qq.com
* @Date: 2020/7/14
* @Time: 10:12
* @Version: 1.0
* @Description: Description
*/
object ResolutionFunction {
def migrate()= {
val dimName = "resolution"
val tbResolution = Constants.MYSQL_TABLE_RESOLUTION
val tbTarget = Constants.MYSQL_TABLE_TERMINAL_DEVICE_RESOLUTION
// 声明需要增加的列
val tbCols = Array((tbNewSource, colDNU), (tbStartSource, colStart))
val colTarget = Array(colIncrease, colLaunch)
// 执行迁移
executeMigrate(tbCols, tbTarget, tbResolution, dimName, colTarget)
}
def main(args: Array[String]): Unit = {
migrate()
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 105,158 | src/transformers/models/longt5/modeling_longt5.py | # coding=utf-8
# Copyright 2022 Google LLC., LongT5 Authors and HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch LongT5 model."""
import copy
import math
import warnings
from typing import Any, List, Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import CrossEntropyLoss
from torch.utils.checkpoint import checkpoint
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
Seq2SeqLMOutput,
Seq2SeqModelOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import ALL_LAYERNORM_LAYERS, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
DUMMY_INPUTS,
DUMMY_MASK,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_torch_fx_proxy,
logging,
replace_return_docstrings,
)
from .configuration_longt5 import LongT5Config
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "LongT5Config"
_CHECKPOINT_FOR_DOC = "google/long-t5-local-base"
# TODO: Update before the merge
LONGT5_PRETRAINED_MODEL_ARCHIVE_LIST = [
"google/long-t5-local-base",
"google/long-t5-local-large",
"google/long-t5-tglobal-base",
"google/long-t5-tglobal-large",
]
def _pad_to_multiple(x: torch.Tensor, block_len: int, dim: int, pad_value: int = 0) -> torch.Tensor:
"""Pad a tensor so that a sequence length will be a multiple of `block_len`"""
pad_len = -x.shape[dim] % block_len
# Handle cases when an empty input sequence is given
if not all(x.shape):
new_shape = list(x.shape)
new_shape[dim] += pad_len
return torch.zeros(new_shape, dtype=x.dtype)
pad = [(0, 0)] * x.ndim
pad[dim] = (0, pad_len)
pad = sum(pad[::-1], ())
x = nn.functional.pad(x, pad=pad, mode="constant", value=pad_value)
return x
def _split_into_blocks(x: torch.Tensor, block_len: int, dim: int) -> torch.Tensor:
"""Split an input tensor into blocks of a given `block_len` along the given `dim`. If the dimension length
is not a multiple of `block_len`, it will be padded first with selected `pad_value`.
"""
# pad tensor to multiple of block_len
if x.shape[dim] % block_len != 0:
x = _pad_to_multiple(x, block_len, dim, pad_value=0)
num_blocks = x.shape[dim] // block_len
output_shape = x.shape[:dim] + (num_blocks, block_len) + x.shape[(dim + 1) :]
# If 0 is in output_shape, we cannot apply reshape because of incompatibility with ONNX conversion
if 0 in output_shape:
return torch.empty(output_shape, dtype=x.dtype, device=x.device)
return x.reshape(output_shape)
def _concatenate_3_blocks(x: torch.Tensor, block_dim: int, sequence_dim: int, pad_value: int = 0) -> torch.Tensor:
"""Concatenate three consecutive blocks for each input block for local attentiont.
For more information, see: https://arxiv.org/pdf/2112.07916.pdf.
"""
num_blocks = x.shape[block_dim]
pad = [(0, 0)] * x.ndim
pad[block_dim] = (1, 1)
pad = sum(pad[::-1], ())
# [batch_size, num_blocks, block_len] -> [batch_size, num_blocks + 2, block_len]
x = nn.functional.pad(x, pad=pad, mode="constant", value=pad_value)
blocks_list: List[torch.Tensor] = []
for i in range(3):
# We use indexing approach here:
# https://numpy.org/doc/stable/user/basics.indexing.html#dealing-with-variable-numbers-of-indices-within-programs
indices = [slice(0, None)] * x.ndim
indices[block_dim] = slice(i, i + num_blocks)
indices = tuple(indices)
blocks_list.append(x[indices])
# [batch_size, num_blocks, 3 * block_len, ...]
return torch.cat(blocks_list, dim=sequence_dim)
def _make_3block_relative_position_ids(block_len: int) -> torch.Tensor:
"""Makes 3-blocked relative position ids for local attention."""
position_ids = torch.arange(3 * block_len, dtype=torch.int32)
center_position_ids = position_ids[block_len:-block_len]
# [block_len, 3 * block_len]
relative_position_ids = position_ids.unsqueeze(0) - center_position_ids.unsqueeze(1)
return relative_position_ids
def _mask_local_attention_mask(local_attention_mask: torch.Tensor, block_len: int) -> torch.Tensor:
"""Mask local attention mask to enforce that tokens are not allowed to attend tokens farther than ``local_radius."""
relative_position_ids = _make_3block_relative_position_ids(block_len)
locality_mask = torch.abs(relative_position_ids) < block_len
locality_mask = locality_mask[None, None, :, :]
locality_mask = locality_mask.to(local_attention_mask.device)
return torch.logical_and(local_attention_mask, locality_mask)
def _get_local_attention_mask(attention_mask: torch.Tensor, block_len: int, device: torch.device) -> torch.Tensor:
"""Prepare attention mask to be applied for a local attention."""
# [batch_size, num_blocks, block_len]
_blocked_attention_mask = _split_into_blocks(attention_mask, block_len, dim=1)
# [batch_size, num_block, 3 * block_len]
_3blocked_attention_mask = _concatenate_3_blocks(_blocked_attention_mask, block_dim=1, sequence_dim=2)
_blocked_attention_mask = _blocked_attention_mask.unsqueeze(-1)
_3blocked_attention_mask = _3blocked_attention_mask.unsqueeze(-2)
# [batch_size, num_block, block_len, 3 * block_len]
local_attention_mask = torch.logical_and(_blocked_attention_mask, _3blocked_attention_mask)
local_attention_mask = _mask_local_attention_mask(local_attention_mask, block_len)
# [batch_size, 1, num_block, block_len, 3 * block_len]
return local_attention_mask.unsqueeze(1).to(device)
def _make_global_fixed_block_ids(
attention_mask: torch.Tensor, global_block_size: int
) -> Tuple[torch.Tensor, torch.Tensor]:
"""Obtain the "fixed block" global id corresponding to each input token.
This implementation is a simlified version of the original Flaxformr implementation adopted from:
https://github.com/google/flaxformer/blob/main/flaxformer/architectures/longt5/long_attention.py.
In our scenario, as we use this strategy only for a decoder, orphan tokens, i.e. those tokens which do not make for
the whole fixed block, are assigned to the preceding block.
Padding tokens from the original sequence are represented by -1.
"""
batch_size, seq_len = attention_mask.shape[:2]
def handle_orphan_tokens(block_ids: torch.Tensor) -> torch.Tensor:
block_ends = (torch.arange(seq_len) % global_block_size) == global_block_size - 1
block_ends = block_ends.to(block_ids.device)
true_block_ends = torch.logical_and(block_ends, block_ids >= 0)
full_blocks = true_block_ends.sum(-1).unsqueeze(-1).type(block_ids.dtype) - 1
block_ids = torch.where(block_ids < full_blocks, block_ids, full_blocks)
return block_ids
fixed_block_mask = torch.ones_like(attention_mask, device=attention_mask.device) / global_block_size
fixed_block_mask = torch.cumsum(fixed_block_mask, axis=1) - fixed_block_mask
mask = torch.where(attention_mask != 0.0, 1.0, -1000.0).type(attention_mask.dtype)
global_block_ids = torch.floor(mask + fixed_block_mask - 1.0).type(attention_mask.dtype)
_global_block_ids_lower_bound = torch.tensor(-1, dtype=global_block_ids.dtype, device=global_block_ids.device)
global_block_ids = torch.where(
global_block_ids > _global_block_ids_lower_bound, global_block_ids, _global_block_ids_lower_bound
)
# set padding tokens to -1
global_block_ids = (global_block_ids * attention_mask) + (attention_mask - 1)
# [batch_size, seq_len]
global_block_ids = handle_orphan_tokens(global_block_ids)
num_globals = seq_len // global_block_size
# [batch_size, seq_len // global_block_size]
if num_globals > 0:
_sequence_block_ids_max = torch.max(global_block_ids, dim=-1).values.repeat(num_globals, 1).transpose(0, 1)
else:
_sequence_block_ids_max = torch.zeros(
batch_size, 0, dtype=global_block_ids.dtype, device=global_block_ids.device
)
global_segment_ids = torch.cumsum(torch.ones(batch_size, num_globals), dim=-1) - 1
global_segment_ids = global_segment_ids.to(attention_mask.device)
global_segment_ids = torch.where(global_segment_ids <= _sequence_block_ids_max, 1, 0)
return global_block_ids.type(torch.int), global_segment_ids.type(torch.int)
def _make_side_relative_position_ids(attention_mask: torch.Tensor, global_block_size: int) -> torch.Tensor:
"""Create the relative position tensor for local -> global attention."""
block_ids, global_segment_ids = _make_global_fixed_block_ids(attention_mask, global_block_size)
global_seq_len = global_segment_ids.shape[-1]
global_positions = torch.arange(global_seq_len, device=block_ids.device)
side_relative_position = global_positions - block_ids[..., None]
return side_relative_position.type(torch.int64)
def _create_global_aggregates(
hidden_states: torch.Tensor, block_ids: torch.Tensor, global_seq_len: int
) -> torch.Tensor:
"""Compute individual block aggregates by summing over individual blocks."""
# (batch..., seq_len, global_seq_len))
block_ids = block_ids.where(
block_ids >= 0, torch.tensor(global_seq_len, dtype=block_ids.dtype, device=block_ids.device)
)
one_hot_block_ids = nn.functional.one_hot(block_ids.type(torch.int64), global_seq_len + 1)[:, :, :-1]
return torch.einsum("...nd,...ng->...gd", hidden_states, one_hot_block_ids.type(hidden_states.dtype))
# Copied from transformers.models.t5.modeling_t5.T5LayerNorm with T5->LongT5
class LongT5LayerNorm(nn.Module):
def __init__(self, hidden_size, eps=1e-6):
"""
Construct a layernorm module in the LongT5 style. No bias and no subtraction of mean.
"""
super().__init__()
self.weight = nn.Parameter(torch.ones(hidden_size))
self.variance_epsilon = eps
def forward(self, hidden_states):
# LongT5 uses a layer_norm which only scales and doesn't shift, which is also known as Root Mean
# Square Layer Normalization https://arxiv.org/abs/1910.07467 thus varience is calculated
# w/o mean and there is no bias. Additionally we want to make sure that the accumulation for
# half-precision inputs is done in fp32
variance = hidden_states.to(torch.float32).pow(2).mean(-1, keepdim=True)
hidden_states = hidden_states * torch.rsqrt(variance + self.variance_epsilon)
# convert into half-precision if necessary
if self.weight.dtype in [torch.float16, torch.bfloat16]:
hidden_states = hidden_states.to(self.weight.dtype)
return self.weight * hidden_states
try:
from apex.normalization import FusedRMSNorm
LongT5LayerNorm = FusedRMSNorm # noqa
logger.info("Discovered apex.normalization.FusedRMSNorm - will use it instead of LongT5LayerNorm")
except ImportError:
# using the normal LongT5LayerNorm
pass
except Exception:
logger.warning("discovered apex but it failed to load, falling back to LongT5LayerNorm")
pass
ALL_LAYERNORM_LAYERS.append(LongT5LayerNorm)
# Copied from transformers.models.t5.modeling_t5.T5DenseActDense with T5->LongT5
class LongT5DenseActDense(nn.Module):
def __init__(self, config: LongT5Config):
super().__init__()
self.wi = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wo = nn.Linear(config.d_ff, config.d_model, bias=False)
self.dropout = nn.Dropout(config.dropout_rate)
self.act = ACT2FN[config.dense_act_fn]
def forward(self, hidden_states):
hidden_states = self.wi(hidden_states)
hidden_states = self.act(hidden_states)
hidden_states = self.dropout(hidden_states)
if (
isinstance(self.wo.weight, torch.Tensor)
and hidden_states.dtype != self.wo.weight.dtype
and self.wo.weight.dtype != torch.int8
):
hidden_states = hidden_states.to(self.wo.weight.dtype)
hidden_states = self.wo(hidden_states)
return hidden_states
class LongT5DenseGatedActDense(nn.Module):
def __init__(self, config: LongT5Config):
super().__init__()
self.wi_0 = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wi_1 = nn.Linear(config.d_model, config.d_ff, bias=False)
self.wo = nn.Linear(config.d_ff, config.d_model, bias=False)
self.dropout = nn.Dropout(config.dropout_rate)
self.act = ACT2FN[config.dense_act_fn]
def forward(self, hidden_states):
hidden_gelu = self.act(self.wi_0(hidden_states))
hidden_linear = self.wi_1(hidden_states)
hidden_states = hidden_gelu * hidden_linear
hidden_states = self.dropout(hidden_states)
hidden_states = self.wo(hidden_states)
return hidden_states
# Copied from transformers.models.t5.modeling_t5.T5LayerFF with T5->LongT5
class LongT5LayerFF(nn.Module):
def __init__(self, config: LongT5Config):
super().__init__()
if config.is_gated_act:
self.DenseReluDense = LongT5DenseGatedActDense(config)
else:
self.DenseReluDense = LongT5DenseActDense(config)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(self, hidden_states):
forwarded_states = self.layer_norm(hidden_states)
forwarded_states = self.DenseReluDense(forwarded_states)
hidden_states = hidden_states + self.dropout(forwarded_states)
return hidden_states
# Copied from transformers.models.t5.modeling_t5.T5Attention with T5->LongT5
class LongT5Attention(nn.Module):
def __init__(self, config: LongT5Config, has_relative_attention_bias=False):
super().__init__()
self.is_decoder = config.is_decoder
self.has_relative_attention_bias = has_relative_attention_bias
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.relative_attention_max_distance = config.relative_attention_max_distance
self.d_model = config.d_model
self.key_value_proj_dim = config.d_kv
self.n_heads = config.num_heads
self.dropout = config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
# Mesh TensorFlow initialization to avoid scaling before softmax
self.q = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.k = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.v = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.o = nn.Linear(self.inner_dim, self.d_model, bias=False)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.pruned_heads = set()
self.gradient_checkpointing = False
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.n_heads, self.key_value_proj_dim, self.pruned_heads
)
# Prune linear layers
self.q = prune_linear_layer(self.q, index)
self.k = prune_linear_layer(self.k, index)
self.v = prune_linear_layer(self.v, index)
self.o = prune_linear_layer(self.o, index, dim=1)
# Update hyper params
self.n_heads = self.n_heads - len(heads)
self.inner_dim = self.key_value_proj_dim * self.n_heads
self.pruned_heads = self.pruned_heads.union(heads)
@staticmethod
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
Args:
relative_position: an int32 Tensor
bidirectional: a boolean - whether the attention is bidirectional
num_buckets: an integer
max_distance: an integer
Returns:
a Tensor with the same shape as relative_position, containing int32 values in the range [0, num_buckets)
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0).to(torch.long) * num_buckets
relative_position = torch.abs(relative_position)
else:
relative_position = -torch.min(relative_position, torch.zeros_like(relative_position))
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
torch.log(relative_position.float() / max_exact)
/ math.log(max_distance / max_exact)
* (num_buckets - max_exact)
).to(torch.long)
relative_position_if_large = torch.min(
relative_position_if_large, torch.full_like(relative_position_if_large, num_buckets - 1)
)
relative_buckets += torch.where(is_small, relative_position, relative_position_if_large)
return relative_buckets
def compute_bias(self, query_length, key_length, device=None):
"""Compute binned relative position bias"""
if device is None:
device = self.relative_attention_bias.weight.device
context_position = torch.arange(query_length, dtype=torch.long, device=device)[:, None]
memory_position = torch.arange(key_length, dtype=torch.long, device=device)[None, :]
relative_position = memory_position - context_position # shape (query_length, key_length)
relative_position_bucket = self._relative_position_bucket(
relative_position, # shape (query_length, key_length)
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
values = self.relative_attention_bias(relative_position_bucket) # shape (query_length, key_length, num_heads)
values = values.permute([2, 0, 1]).unsqueeze(0) # shape (1, num_heads, query_length, key_length)
return values
def forward(
self,
hidden_states,
mask=None,
key_value_states=None,
position_bias=None,
past_key_value=None,
layer_head_mask=None,
query_length=None,
use_cache=False,
output_attentions=False,
):
"""
Self-attention (if key_value_states is None) or attention over source sentence (provided by key_value_states).
"""
# Input is (batch_size, seq_length, dim)
# Mask is (batch_size, key_length) (non-causal) or (batch_size, key_length, key_length)
# past_key_value[0] is (batch_size, n_heads, q_len - 1, dim_per_head)
batch_size, seq_length = hidden_states.shape[:2]
real_seq_length = seq_length
if past_key_value is not None:
assert (
len(past_key_value) == 2
), f"past_key_value should have 2 past states: keys and values. Got { len(past_key_value)} past states"
real_seq_length += past_key_value[0].shape[2] if query_length is None else query_length
key_length = real_seq_length if key_value_states is None else key_value_states.shape[1]
def shape(states):
"""projection"""
return states.view(batch_size, -1, self.n_heads, self.key_value_proj_dim).transpose(1, 2)
def unshape(states):
"""reshape"""
return states.transpose(1, 2).contiguous().view(batch_size, -1, self.inner_dim)
def project(hidden_states, proj_layer, key_value_states, past_key_value):
"""projects hidden states correctly to key/query states"""
if key_value_states is None:
# self-attn
# (batch_size, n_heads, seq_length, dim_per_head)
hidden_states = shape(proj_layer(hidden_states))
elif past_key_value is None:
# cross-attn
# (batch_size, n_heads, seq_length, dim_per_head)
hidden_states = shape(proj_layer(key_value_states))
if past_key_value is not None:
if key_value_states is None:
# self-attn
# (batch_size, n_heads, key_length, dim_per_head)
hidden_states = torch.cat([past_key_value, hidden_states], dim=2)
elif past_key_value.shape[2] != key_value_states.shape[1]:
# checking that the `sequence_length` of the `past_key_value` is the same as
# the provided `key_value_states` to support prefix tuning
# cross-attn
# (batch_size, n_heads, seq_length, dim_per_head)
hidden_states = shape(proj_layer(key_value_states))
else:
# cross-attn
hidden_states = past_key_value
return hidden_states
# get query states
query_states = shape(self.q(hidden_states)) # (batch_size, n_heads, seq_length, dim_per_head)
# get key/value states
key_states = project(
hidden_states, self.k, key_value_states, past_key_value[0] if past_key_value is not None else None
)
value_states = project(
hidden_states, self.v, key_value_states, past_key_value[1] if past_key_value is not None else None
)
# compute scores
scores = torch.matmul(
query_states, key_states.transpose(3, 2)
) # equivalent of torch.einsum("bnqd,bnkd->bnqk", query_states, key_states), compatible with onnx op>9
if position_bias is None:
if not self.has_relative_attention_bias:
position_bias = torch.zeros(
(1, self.n_heads, real_seq_length, key_length), device=scores.device, dtype=scores.dtype
)
if self.gradient_checkpointing and self.training:
position_bias.requires_grad = True
else:
position_bias = self.compute_bias(real_seq_length, key_length, device=scores.device)
# if key and values are already calculated
# we want only the last query position bias
if past_key_value is not None:
position_bias = position_bias[:, :, -hidden_states.size(1) :, :]
if mask is not None:
position_bias = position_bias + mask # (batch_size, n_heads, seq_length, key_length)
if self.pruned_heads:
mask = torch.ones(position_bias.shape[1])
mask[list(self.pruned_heads)] = 0
position_bias_masked = position_bias[:, mask.bool()]
else:
position_bias_masked = position_bias
scores += position_bias_masked
attn_weights = nn.functional.softmax(scores.float(), dim=-1).type_as(
scores
) # (batch_size, n_heads, seq_length, key_length)
attn_weights = nn.functional.dropout(
attn_weights, p=self.dropout, training=self.training
) # (batch_size, n_heads, seq_length, key_length)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = attn_weights * layer_head_mask
attn_output = unshape(torch.matmul(attn_weights, value_states)) # (batch_size, seq_length, dim)
attn_output = self.o(attn_output)
present_key_value_state = (key_states, value_states) if (self.is_decoder and use_cache) else None
outputs = (attn_output,) + (present_key_value_state,) + (position_bias,)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class LongT5LocalAttention(nn.Module):
def __init__(self, config: LongT5Config, has_relative_attention_bias: bool = False) -> None:
super().__init__()
self.is_decoder = config.is_decoder
self.has_relative_attention_bias = has_relative_attention_bias
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.relative_attention_max_distance = config.relative_attention_max_distance
self.d_model = config.d_model
self.key_value_proj_dim = config.d_kv
self.n_heads = config.num_heads
self.local_radius = config.local_radius
self.block_len = self.local_radius + 1
self.dropout = config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
# Mesh TensorFlow initialization to avoid scaling before softmax
self.q = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.k = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.v = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.o = nn.Linear(self.inner_dim, self.d_model, bias=False)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.pruned_heads = set()
self.gradient_checkpointing = False
# Copied from transformers.models.t5.modeling_t5.T5Attention.prune_heads
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.n_heads, self.key_value_proj_dim, self.pruned_heads
)
# Prune linear layers
self.q = prune_linear_layer(self.q, index)
self.k = prune_linear_layer(self.k, index)
self.v = prune_linear_layer(self.v, index)
self.o = prune_linear_layer(self.o, index, dim=1)
# Update hyper params
self.n_heads = self.n_heads - len(heads)
self.inner_dim = self.key_value_proj_dim * self.n_heads
self.pruned_heads = self.pruned_heads.union(heads)
@staticmethod
# Copied from transformers.models.t5.modeling_t5.T5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
Args:
relative_position: an int32 Tensor
bidirectional: a boolean - whether the attention is bidirectional
num_buckets: an integer
max_distance: an integer
Returns:
a Tensor with the same shape as relative_position, containing int32 values in the range [0, num_buckets)
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0).to(torch.long) * num_buckets
relative_position = torch.abs(relative_position)
else:
relative_position = -torch.min(relative_position, torch.zeros_like(relative_position))
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
torch.log(relative_position.float() / max_exact)
/ math.log(max_distance / max_exact)
* (num_buckets - max_exact)
).to(torch.long)
relative_position_if_large = torch.min(
relative_position_if_large, torch.full_like(relative_position_if_large, num_buckets - 1)
)
relative_buckets += torch.where(is_small, relative_position, relative_position_if_large)
return relative_buckets
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
target_device = (
self.relative_attention_bias.weight.device
if self.relative_attention_bias.weight.device.type != "meta"
else None
)
memory_position = torch.arange(3 * block_length, dtype=torch.long, device=target_device)
context_position = memory_position[block_length:-block_length]
# (block_length, 3 * block_length)
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position, # (block_length, 3 * block_length)
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (block_length, 3 * block_length, num_heads)
values = self.relative_attention_bias(relative_position_bucket)
# (1, 1, num_heads, block_length, 3 * block_length)
values = values.permute([2, 0, 1]).unsqueeze(0).unsqueeze(0)
return values
def forward(
self,
hidden_states,
mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
):
batch_size, seq_length = hidden_states.shape[:2]
def shape(states):
"""projection"""
return states.view(batch_size, -1, self.n_heads, self.key_value_proj_dim)
def unshape(states):
"""reshape"""
return states.contiguous().view(batch_size, -1, self.inner_dim)
# get query/key/value states -> (batch_size, seq_length, n_heads, dim_per_head)
query_states = shape(self.q(hidden_states))
key_states = shape(self.k(hidden_states))
value_states = shape(self.v(hidden_states))
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, dim_per_head)
query_states = _split_into_blocks(query_states, self.block_len, dim=1)
key_states = _split_into_blocks(key_states, self.block_len, dim=1)
value_states = _split_into_blocks(value_states, self.block_len, dim=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_dim=1, sequence_dim=2)
value_states = _concatenate_3_blocks(value_states, block_dim=1, sequence_dim=2)
# Compute scores
scores = torch.einsum(
"...qhd,...khd->...hqk", query_states, key_states
) # (batch_size, num_block, n_heads, block_len, 3 * block_len)
if position_bias is None:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if not self.has_relative_attention_bias:
position_bias = torch.zeros(
(1, 1, self.n_heads, self.block_len, 3 * self.block_len), device=scores.device, dtype=scores.dtype
)
if self.gradient_checkpointing and self.training:
position_bias.requires_grad = True
else:
position_bias = self.compute_bias(self.block_len)
if mask is not None:
# Replace masked positions with -1e10 (according to the original implementation)
mask = torch.where(mask > 0, 0.0, -1e10)
# We need to adjust position bias shape to be sum with mask
position_bias = position_bias + mask.transpose(1, 2)
scores += position_bias
# (batch_size, num_blocks, n_heads, block_len, 3 * block_len)
attn_weights = nn.functional.softmax(scores.float(), dim=-1).type_as(scores)
# (batch_size, num_blocks, n_heads, block_len, 3 * block_len)
attn_weights = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = attn_weights * layer_head_mask
attn_weights = attn_weights.type(value_states.dtype)
attn_output = unshape(torch.einsum("...hqk,...khd->...qhd", attn_weights, value_states))
attn_output = attn_output[:, :seq_length, :]
attn_output = self.o(attn_output)
present_key_value_state = None
outputs = (attn_output,) + (present_key_value_state,) + (position_bias,)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
class LongT5TransientGlobalAttention(nn.Module):
def __init__(self, config: LongT5Config, has_relative_attention_bias: bool = False) -> None:
super().__init__()
self.is_decoder = config.is_decoder
self.has_relative_attention_bias = has_relative_attention_bias
self.relative_attention_num_buckets = config.relative_attention_num_buckets
self.relative_attention_max_distance = config.relative_attention_max_distance
self.d_model = config.d_model
self.key_value_proj_dim = config.d_kv
self.n_heads = config.num_heads
self.local_radius = config.local_radius
self.block_len = self.local_radius + 1
self.global_block_size = config.global_block_size
self.dropout = config.dropout_rate
self.inner_dim = self.n_heads * self.key_value_proj_dim
# Mesh TensorFlow initialization to avoid scaling before softmax
self.q = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.k = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.v = nn.Linear(self.d_model, self.inner_dim, bias=False)
self.o = nn.Linear(self.inner_dim, self.d_model, bias=False)
if self.has_relative_attention_bias:
self.relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.pruned_heads = set()
self.gradient_checkpointing = False
# Relativen attention bias & Layer norm for global attention
if self.has_relative_attention_bias:
self.global_relative_attention_bias = nn.Embedding(self.relative_attention_num_buckets, self.n_heads)
self.global_input_layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
# Copied from transformers.models.t5.modeling_t5.T5Attention.prune_heads
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.n_heads, self.key_value_proj_dim, self.pruned_heads
)
# Prune linear layers
self.q = prune_linear_layer(self.q, index)
self.k = prune_linear_layer(self.k, index)
self.v = prune_linear_layer(self.v, index)
self.o = prune_linear_layer(self.o, index, dim=1)
# Update hyper params
self.n_heads = self.n_heads - len(heads)
self.inner_dim = self.key_value_proj_dim * self.n_heads
self.pruned_heads = self.pruned_heads.union(heads)
@staticmethod
# Copied from transformers.models.t5.modeling_t5.T5Attention._relative_position_bucket
def _relative_position_bucket(relative_position, bidirectional=True, num_buckets=32, max_distance=128):
"""
Adapted from Mesh Tensorflow:
https://github.com/tensorflow/mesh/blob/0cb87fe07da627bf0b7e60475d59f95ed6b5be3d/mesh_tensorflow/transformer/transformer_layers.py#L593
Translate relative position to a bucket number for relative attention. The relative position is defined as
memory_position - query_position, i.e. the distance in tokens from the attending position to the attended-to
position. If bidirectional=False, then positive relative positions are invalid. We use smaller buckets for
small absolute relative_position and larger buckets for larger absolute relative_positions. All relative
positions >=max_distance map to the same bucket. All relative positions <=-max_distance map to the same bucket.
This should allow for more graceful generalization to longer sequences than the model has been trained on
Args:
relative_position: an int32 Tensor
bidirectional: a boolean - whether the attention is bidirectional
num_buckets: an integer
max_distance: an integer
Returns:
a Tensor with the same shape as relative_position, containing int32 values in the range [0, num_buckets)
"""
relative_buckets = 0
if bidirectional:
num_buckets //= 2
relative_buckets += (relative_position > 0).to(torch.long) * num_buckets
relative_position = torch.abs(relative_position)
else:
relative_position = -torch.min(relative_position, torch.zeros_like(relative_position))
# now relative_position is in the range [0, inf)
# half of the buckets are for exact increments in positions
max_exact = num_buckets // 2
is_small = relative_position < max_exact
# The other half of the buckets are for logarithmically bigger bins in positions up to max_distance
relative_position_if_large = max_exact + (
torch.log(relative_position.float() / max_exact)
/ math.log(max_distance / max_exact)
* (num_buckets - max_exact)
).to(torch.long)
relative_position_if_large = torch.min(
relative_position_if_large, torch.full_like(relative_position_if_large, num_buckets - 1)
)
relative_buckets += torch.where(is_small, relative_position, relative_position_if_large)
return relative_buckets
def compute_bias(self, block_length: int):
"""Compute binned relative position bias"""
target_device = (
self.relative_attention_bias.weight.device
if self.relative_attention_bias.weight.device.type != "meta"
else None
)
memory_position = torch.arange(3 * block_length, dtype=torch.long, device=target_device)
context_position = memory_position[block_length:-block_length]
# (block_length, 3 * block_length)
relative_position = memory_position[None, :] - context_position[:, None]
relative_position_bucket = self._relative_position_bucket(
relative_position, # (block_length, 3 * block_length)
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (block_length, 3 * block_length, num_heads)
values = self.relative_attention_bias(relative_position_bucket)
# (1, 1, num_heads, block_length, 3 * block_length)
values = values.permute([2, 0, 1]).unsqueeze(0).unsqueeze(0)
return values
def compute_side_bias(self, mask: torch.Tensor, global_segment_ids: torch.Tensor) -> torch.Tensor:
# (batch_size, 1, seq_len, global_seq_len)
side_attention_mask = torch.eq(mask[..., None], global_segment_ids[:, None, :])[:, None, ...]
attention_side_bias = torch.where(side_attention_mask > 0, 0.0, -1e10)
# (batch_size, seq_len, global_seq_len)
side_relative_position = _make_side_relative_position_ids(mask, self.global_block_size)
side_relative_position_bucket = self._relative_position_bucket(
side_relative_position,
bidirectional=(not self.is_decoder),
num_buckets=self.relative_attention_num_buckets,
max_distance=self.relative_attention_max_distance,
)
# (batch_size, seq_len, global_seq_len, num_heads)
side_bias = self.global_relative_attention_bias(side_relative_position_bucket)
# (batch_size, num_heads, seq_len, global_seq_len)
side_bias = side_bias.permute([0, 3, 1, 2])
# (batch_size, num_heads, seq_len, global_seq_len)
attention_side_bias = attention_side_bias + side_bias
return attention_side_bias
def forward(
self,
hidden_states,
mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
):
batch_size, seq_length = hidden_states.shape[:2]
def shape(states):
"""projection"""
return states.view(batch_size, -1, self.n_heads, self.key_value_proj_dim)
def unshape(states):
"""reshape"""
return states.contiguous().view(batch_size, -1, self.inner_dim)
# Prepare components for transient-global attention
# Obtain block_ids and global_segment_ids
# global_seq_len := seq_len // self.global_block_size
# shapes: (batch_size, seq_len) & (batch_size, global_seq_len)
block_ids, global_segment_ids = _make_global_fixed_block_ids(
mask if mask is not None else torch.ones(hidden_states.shape[:-1]),
self.global_block_size,
)
# Create global inputs
_global_seq_len = global_segment_ids.shape[-1]
global_inputs = _create_global_aggregates(hidden_states, block_ids, _global_seq_len)
global_inputs = self.global_input_layer_norm(global_inputs)
# get query states -> (batch_size, seq_length, n_heads, dim_per_head)
query_states = shape(self.q(hidden_states))
key_states = shape(self.k(hidden_states))
value_states = shape(self.v(hidden_states))
# Get global/side key/value states shape: (batch_size, global_seq_len, n_heads, dim_per_head)
side_key_states = shape(self.k(global_inputs))
side_value_states = shape(self.v(global_inputs))
# Split into blocks -> (batch_size, num_blocks, block_len, n_heads, dim_per_head)
query_states = _split_into_blocks(query_states, self.block_len, dim=1)
key_states = _split_into_blocks(key_states, self.block_len, dim=1)
value_states = _split_into_blocks(value_states, self.block_len, dim=1)
# Concatenate 3 blocks for keys and values -> (batch_size, num_blocks, 3 * block_len, n_heads, dim_per_head)
key_states = _concatenate_3_blocks(key_states, block_dim=1, sequence_dim=2)
value_states = _concatenate_3_blocks(value_states, block_dim=1, sequence_dim=2)
# Tile side inputs across local key/value blocks
# New shape: (batch_size, num_blocks, global_seq_len, n_heads, dim_per_head)
reps = [1] * (side_key_states.ndim + 1)
reps[1] = key_states.shape[1]
side_key_states = side_key_states.unsqueeze(1).repeat(reps)
side_value_states = side_value_states.unsqueeze(1).repeat(reps)
# Concatenate "local" and "side"/"global" key/value states to allow each token to attend global aggregated ones
# New shape: (batch_size, num_blocks, 3 * block_len + global_seq_len, n_heads, dim_per_head)
key_states = torch.cat([key_states, side_key_states], dim=2)
value_states = torch.cat([value_states, side_value_states], dim=2)
# Compute scores -> (batch_size, num_block, n_heads, block_len, 3 * block_len + global_seq_len)
scores = torch.einsum("...qhd,...khd->...hqk", query_states, key_states)
if mask is not None:
# We need to adjust position bias shape to be sum with mask
local_attention_mask = _get_local_attention_mask(mask, self.block_len, hidden_states.device)
# Replace masked positions with -10_000 (according to the original implementation)
local_attention_mask = torch.where(local_attention_mask > 0, 0.0, -1e10)
else:
local_attention_mask = None
if position_bias is None:
# position_bias shape: # (1, 1, n_heads, block_len, 3 * block_len)
if not self.has_relative_attention_bias:
position_bias = torch.zeros(
(1, 1, self.n_heads, self.block_len, 3 * self.block_len),
device=scores.device,
dtype=scores.dtype,
)
if self.gradient_checkpointing and self.training:
position_bias.requires_grad = True
else:
position_bias = self.compute_bias(self.block_len)
if local_attention_mask is not None:
# (batch_size, 1, n_heads, block_len, 3 * block_len)
position_bias = position_bias + local_attention_mask.transpose(1, 2)
position_bias = position_bias.type(scores.dtype)
# Calculate global/side bias - shape: # (batch_size, num_heads, seq_len, global_seq_len)
if mask is None:
mask = torch.ones(batch_size, seq_length)
# (batch_size, num_heads, seq_len, global_seq_len)
side_position_bias = self.compute_side_bias(mask, global_segment_ids)
# (batch_size, num_blocks, num_heads, block_len, global_seq_len)
side_position_bias = _split_into_blocks(side_position_bias, self.block_len, dim=-2).transpose(1, 2)
side_position_bias = side_position_bias.type(scores.dtype).to(scores.device)
# (batch_size, num_blocks, num_heads, block_len, 3 * block_len + global_seq_len)
position_bias = torch.cat([position_bias, side_position_bias], dim=-1)
scores += position_bias
# (batch_size, num_blocks, n_heads, block_len, 3 * block_len + global_seq_len)
attn_weights = nn.functional.softmax(scores.float(), dim=-1).type_as(scores)
attn_weights = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = attn_weights * layer_head_mask
attn_weights = attn_weights.type(value_states.dtype)
attn_output = unshape(torch.einsum("...hqk,...khd->...qhd", attn_weights, value_states))
attn_output = attn_output[:, :seq_length, :]
attn_output = self.o(attn_output)
present_key_value_state = None
outputs = (attn_output,) + (present_key_value_state,) + (position_bias,)
if output_attentions:
outputs = outputs + (attn_weights,)
return outputs
# Copied from transformers.models.t5.modeling_t5.T5LayerSelfAttention with T5->LongT5
class LongT5LayerSelfAttention(nn.Module):
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.SelfAttention = LongT5Attention(config, has_relative_attention_bias=has_relative_attention_bias)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
past_key_value=None,
use_cache=False,
output_attentions=False,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.SelfAttention(
normed_hidden_states,
mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
past_key_value=past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0])
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class LongT5LayerLocalSelfAttention(nn.Module):
"""Local self attention used in encoder"""
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.LocalSelfAttention = LongT5LocalAttention(config, has_relative_attention_bias=has_relative_attention_bias)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
**kwargs: Any, # to accept past_key_value and use_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.LocalSelfAttention(
normed_hidden_states,
mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0])
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
class LongT5LayerTransientGlobalSelfAttention(nn.Module):
"""Transient-Global self attention used in encoder"""
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.TransientGlobalSelfAttention = LongT5TransientGlobalAttention(
config, has_relative_attention_bias=has_relative_attention_bias
)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
output_attentions=False,
**kwargs: Any, # to accept past_key_value and use_cache kwargs
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.TransientGlobalSelfAttention(
normed_hidden_states,
mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = hidden_states + self.dropout(attention_output[0])
outputs = (hidden_states,) + attention_output[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.t5.modeling_t5.T5LayerCrossAttention with T5->LongT5
class LongT5LayerCrossAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.EncDecAttention = LongT5Attention(config, has_relative_attention_bias=False)
self.layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
def forward(
self,
hidden_states,
key_value_states,
attention_mask=None,
position_bias=None,
layer_head_mask=None,
past_key_value=None,
use_cache=False,
query_length=None,
output_attentions=False,
):
normed_hidden_states = self.layer_norm(hidden_states)
attention_output = self.EncDecAttention(
normed_hidden_states,
mask=attention_mask,
key_value_states=key_value_states,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
past_key_value=past_key_value,
use_cache=use_cache,
query_length=query_length,
output_attentions=output_attentions,
)
layer_output = hidden_states + self.dropout(attention_output[0])
outputs = (layer_output,) + attention_output[1:] # add attentions if we output them
return outputs
class LongT5Block(nn.Module):
def __init__(self, config, has_relative_attention_bias=False):
super().__init__()
self.is_decoder = config.is_decoder
if config.is_decoder:
attention_layer = LongT5LayerSelfAttention
elif config.encoder_attention_type == "local":
attention_layer = LongT5LayerLocalSelfAttention
elif config.encoder_attention_type == "transient-global":
attention_layer = LongT5LayerTransientGlobalSelfAttention
else:
raise ValueError(
"For encoder attention mechanism, either `local` or `transient-global` attention type is expected, "
f"but got {config.encoder_attention_type}."
)
self.layer = nn.ModuleList()
self.layer.append(attention_layer(config, has_relative_attention_bias=has_relative_attention_bias))
if self.is_decoder:
self.layer.append(LongT5LayerCrossAttention(config))
self.layer.append(LongT5LayerFF(config))
def forward(
self,
hidden_states,
attention_mask=None,
position_bias=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
encoder_decoder_position_bias=None,
layer_head_mask=None,
cross_attn_layer_head_mask=None,
past_key_value=None,
use_cache=False,
output_attentions=False,
return_dict=True,
):
if past_key_value is not None:
if not self.is_decoder:
logger.warning("`past_key_values` is passed to the encoder. Please make sure this is intended.")
expected_num_past_key_values = 2 if encoder_hidden_states is None else 4
if len(past_key_value) != expected_num_past_key_values:
raise ValueError(
f"There should be {expected_num_past_key_values} past states. "
f"{'2 (past / key) for cross attention. ' if expected_num_past_key_values == 4 else ''}"
f"Got {len(past_key_value)} past key / value states"
)
self_attn_past_key_value = past_key_value[:2]
cross_attn_past_key_value = past_key_value[2:]
else:
self_attn_past_key_value, cross_attn_past_key_value = None, None
self_attention_outputs = self.layer[0](
hidden_states,
attention_mask=attention_mask,
position_bias=position_bias,
layer_head_mask=layer_head_mask,
past_key_value=self_attn_past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states, present_key_value_state = self_attention_outputs[:2]
attention_outputs = self_attention_outputs[2:] # Keep self-attention outputs and relative position weights
# clamp inf values to enable fp16 inference - check https://github.com/huggingface/transformers/pull/19229/
if hidden_states.dtype == torch.float16 and torch.isinf(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
do_cross_attention = self.is_decoder and encoder_hidden_states is not None
if do_cross_attention:
# the actual query length is unknown for cross attention
# if using past key value states. Need to inject it here
if present_key_value_state is not None:
query_length = present_key_value_state[0].shape[2]
else:
query_length = None
cross_attention_outputs = self.layer[1](
hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
position_bias=encoder_decoder_position_bias,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
query_length=query_length,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states = cross_attention_outputs[0]
# clamp inf values to enable fp16 inference - check https://github.com/huggingface/transformers/pull/19229/
if hidden_states.dtype == torch.float16 and torch.isinf(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
# Combine self attn and cross attn key value states
if present_key_value_state is not None:
present_key_value_state = present_key_value_state + cross_attention_outputs[1]
# Keep cross-attention outputs and relative position weights
attention_outputs = attention_outputs + cross_attention_outputs[2:]
# Apply Feed Forward layer
hidden_states = self.layer[-1](hidden_states)
# clamp inf values to enable fp16 inference - check https://github.com/huggingface/transformers/pull/19229/
if hidden_states.dtype == torch.float16 and torch.isinf(hidden_states).any():
clamp_value = torch.finfo(hidden_states.dtype).max - 1000
hidden_states = torch.clamp(hidden_states, min=-clamp_value, max=clamp_value)
outputs = (hidden_states,)
if use_cache:
outputs = outputs + (present_key_value_state,) + attention_outputs
else:
outputs = outputs + attention_outputs
return outputs # hidden-states, present_key_value_states, (self-attention position bias), (self-attention weights), (cross-attention position bias), (cross-attention weights)
class LongT5PreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = LongT5Config
base_model_prefix = "transformer"
supports_gradient_checkpointing = True
_no_split_modules = ["LongT5Block"]
@property
# Copied from transformers.models.t5.modeling_t5.T5PreTrainedModel.dummy_inputs
def dummy_inputs(self):
input_ids = torch.tensor(DUMMY_INPUTS)
input_mask = torch.tensor(DUMMY_MASK)
dummy_inputs = {
"decoder_input_ids": input_ids,
"input_ids": input_ids,
"decoder_attention_mask": input_mask,
}
return dummy_inputs
def _init_weights(self, module):
"""Initialize the weights"""
factor = self.config.initializer_factor # Used for testing weights initialization
if isinstance(module, LongT5LayerNorm):
module.weight.data.fill_(factor * 1.0)
elif isinstance(module, (LongT5Model, LongT5ForConditionalGeneration, LongT5EncoderModel)):
# Mesh TensorFlow embeddings initialization
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L1624
module.shared.weight.data.normal_(mean=0.0, std=factor * 1.0)
elif isinstance(module, LongT5DenseActDense):
# Mesh TensorFlow FF initialization
# See https://github.com/tensorflow/mesh/blob/master/mesh_tensorflow/transformer/transformer_layers.py#L56
# and https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L89
module.wi.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi, "bias") and module.wi.bias is not None:
module.wi.bias.data.zero_()
module.wo.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_ff) ** -0.5))
if hasattr(module.wo, "bias") and module.wo.bias is not None:
module.wo.bias.data.zero_()
elif isinstance(module, LongT5DenseGatedActDense):
module.wi_0.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi_0, "bias") and module.wi_0.bias is not None:
module.wi_0.bias.data.zero_()
module.wi_1.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_model) ** -0.5))
if hasattr(module.wi_1, "bias") and module.wi_1.bias is not None:
module.wi_1.bias.data.zero_()
module.wo.weight.data.normal_(mean=0.0, std=factor * ((self.config.d_ff) ** -0.5))
if hasattr(module.wo, "bias") and module.wo.bias is not None:
module.wo.bias.data.zero_()
elif isinstance(module, (LongT5Attention, LongT5LocalAttention, LongT5TransientGlobalAttention)):
# Mesh TensorFlow attention initialization to avoid scaling before softmax
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/attention.py#L136
d_model = self.config.d_model
key_value_proj_dim = self.config.d_kv
n_heads = self.config.num_heads
module.q.weight.data.normal_(mean=0.0, std=factor * ((d_model * key_value_proj_dim) ** -0.5))
module.k.weight.data.normal_(mean=0.0, std=factor * (d_model**-0.5))
module.v.weight.data.normal_(mean=0.0, std=factor * (d_model**-0.5))
module.o.weight.data.normal_(mean=0.0, std=factor * ((n_heads * key_value_proj_dim) ** -0.5))
if module.has_relative_attention_bias:
module.relative_attention_bias.weight.data.normal_(mean=0.0, std=factor * ((d_model) ** -0.5))
if isinstance(module, LongT5TransientGlobalAttention):
module.global_relative_attention_bias.weight.data.normal_(
mean=0.0, std=factor * ((d_model) ** -0.5)
)
# Copied from transformers.models.t5.modeling_t5.T5PreTrainedModel._set_gradient_checkpointing with T5->LongT5
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (LongT5Attention, LongT5Stack)):
module.gradient_checkpointing = value
# Copied from transformers.models.t5.modeling_t5.T5PreTrainedModel._shift_right with T5->LongT5
def _shift_right(self, input_ids):
decoder_start_token_id = self.config.decoder_start_token_id
pad_token_id = self.config.pad_token_id
assert decoder_start_token_id is not None, (
"self.model.config.decoder_start_token_id has to be defined. In LongT5 it is usually set to the pad_token_id."
" See LongT5 docs for more information"
)
# shift inputs to the right
if is_torch_fx_proxy(input_ids):
# Item assignment is not supported natively for proxies.
shifted_input_ids = torch.full(input_ids.shape[:-1] + (1,), decoder_start_token_id)
shifted_input_ids = torch.cat([shifted_input_ids, input_ids[..., :-1]], dim=-1)
else:
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[..., 1:] = input_ids[..., :-1].clone()
shifted_input_ids[..., 0] = decoder_start_token_id
assert pad_token_id is not None, "self.model.config.pad_token_id has to be defined."
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
return shifted_input_ids
class LongT5Stack(LongT5PreTrainedModel):
def __init__(self, config, embed_tokens=None):
super().__init__(config)
self.embed_tokens = nn.Embedding(config.vocab_size, config.d_model)
if embed_tokens is not None:
self.embed_tokens.weight = embed_tokens.weight
self.is_decoder = config.is_decoder
self.local_radius = config.local_radius
self.block_len = self.local_radius + 1
self.block = nn.ModuleList(
[LongT5Block(config, has_relative_attention_bias=bool(i == 0)) for i in range(config.num_layers)]
)
self.final_layer_norm = LongT5LayerNorm(config.d_model, eps=config.layer_norm_epsilon)
self.dropout = nn.Dropout(config.dropout_rate)
# Initialize weights and apply final processing
self.post_init()
self.gradient_checkpointing = False
# Copied from transformers.models.t5.modeling_t5.T5Stack.get_input_embeddings
def get_input_embeddings(self):
return self.embed_tokens
# Copied from transformers.models.t5.modeling_t5.T5Stack.set_input_embeddings
def set_input_embeddings(self, new_embeddings):
self.embed_tokens = new_embeddings
def forward(
self,
input_ids=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
inputs_embeds=None,
head_mask=None,
cross_attn_head_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
err_msg_prefix = "decoder_" if self.is_decoder else ""
raise ValueError(
f"You cannot specify both {err_msg_prefix}input_ids and {err_msg_prefix}inputs_embeds at the same time"
)
elif input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
err_msg_prefix = "decoder_" if self.is_decoder else ""
raise ValueError(f"You have to specify either {err_msg_prefix}input_ids or {err_msg_prefix}inputs_embeds")
if inputs_embeds is None:
assert self.embed_tokens is not None, "You have to initialize the model with valid token embeddings"
inputs_embeds = self.embed_tokens(input_ids)
batch_size, seq_length = input_shape
# required mask seq length can be calculated via length of past
mask_seq_length = past_key_values[0][0].shape[2] + seq_length if past_key_values is not None else seq_length
if use_cache is True:
assert self.is_decoder, f"`use_cache` can only be set to `True` if {self} is used as a decoder"
if attention_mask is None:
attention_mask = torch.ones(batch_size, mask_seq_length, device=inputs_embeds.device)
# initialize past_key_values with `None` if past does not exist
if past_key_values is None:
past_key_values = [None] * len(self.block)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
# We use local attention in encoder self-attention, otherwise standard self & cross attentions are used
if self.is_decoder:
extended_attention_mask = self.get_extended_attention_mask(
attention_mask, input_shape, inputs_embeds.device
)
elif self.config.encoder_attention_type == "local":
extended_attention_mask = _get_local_attention_mask(attention_mask, self.block_len, inputs_embeds.device)
else: # we need to use both local attention mask and standard extended mask for transient-global attention
extended_attention_mask = attention_mask
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=inputs_embeds.device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
head_mask = self.get_head_mask(head_mask, self.config.num_layers)
cross_attn_head_mask = self.get_head_mask(cross_attn_head_mask, self.config.num_layers)
present_key_value_states = () if use_cache else None
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
all_cross_attentions = () if (output_attentions and self.is_decoder) else None
position_bias = None
encoder_decoder_position_bias = None
hidden_states = self.dropout(inputs_embeds)
for i, (layer_module, past_key_value) in enumerate(zip(self.block, past_key_values)):
layer_head_mask = head_mask[i]
cross_attn_layer_head_mask = cross_attn_head_mask[i]
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
if use_cache:
use_cache = False
def create_custom_forward(module):
def custom_forward(*inputs):
return tuple(module(*inputs, use_cache, output_attentions))
return custom_forward
layer_outputs = checkpoint(
create_custom_forward(layer_module),
hidden_states,
extended_attention_mask,
position_bias,
encoder_hidden_states,
encoder_extended_attention_mask,
encoder_decoder_position_bias,
layer_head_mask,
cross_attn_layer_head_mask,
None, # past_key_value is always None with gradient checkpointing
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask=extended_attention_mask,
position_bias=position_bias,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
encoder_decoder_position_bias=encoder_decoder_position_bias,
layer_head_mask=layer_head_mask,
cross_attn_layer_head_mask=cross_attn_layer_head_mask,
past_key_value=past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
# layer_outputs is a tuple with:
# hidden-states, key-value-states, (self-attention position bias), (self-attention weights), (cross-attention position bias), (cross-attention weights)
if use_cache is False:
layer_outputs = layer_outputs[:1] + (None,) + layer_outputs[1:]
hidden_states, present_key_value_state = layer_outputs[:2]
# We share the position biases between the layers - the first layer store them
# layer_outputs = hidden-states, key-value-states (self-attention position bias), (self-attention weights),
# (cross-attention position bias), (cross-attention weights)
position_bias = layer_outputs[2]
if self.is_decoder and encoder_hidden_states is not None:
encoder_decoder_position_bias = layer_outputs[4 if output_attentions else 3]
# append next layer key value states
if use_cache:
present_key_value_states = present_key_value_states + (present_key_value_state,)
if output_attentions:
all_attentions = all_attentions + (layer_outputs[3],)
if self.is_decoder:
all_cross_attentions = all_cross_attentions + (layer_outputs[5],)
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.dropout(hidden_states)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
present_key_value_states,
all_hidden_states,
all_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=present_key_value_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
LONGT5_START_DOCSTRING = r"""
The LongT5 model was proposed in [LongT5: Efficient Text-To-Text Transformer for Long
Sequences](https://arxiv.org/abs/2112.07916) by Mandy Guo, Joshua Ainslie, David Uthus, Santiago Ontanon, Jianmo
Ni, Yun-Hsuan Sung and Yinfei Yang. It's an encoder-decoder transformer pre-trained in a text-to-text denoising
generative setting. LongT5 model is an extension of T5 model, and it enables using one of the two different
efficient attention mechanisms - (1) Local attention, or (2) Transient-Global attention.
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`LongT5Config`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
LONGT5_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
[What are input IDs?](../glossary#input-ids)
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
LONGT5 uses the `pad_token_id` as the starting token for `decoder_input_ids` generation. If
`past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
To know more on how to prepare `decoder_input_ids` for pretraining take a look at [LONGT5
Training](./longt5#training).
decoder_attention_mask (`torch.BoolTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules in the encoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules in the decoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder. Mask values selected in
`[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, `optional`: *hidden_states*, `optional`: *attentions*)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)` is a sequence of hidden states at
the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
decoder_inputs_embeds (`torch.FloatTensor` of shape `(batch_size, target_sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `decoder_input_ids` you can choose to directly pass an embedded
representation. If `past_key_values` is used, optionally only the last `decoder_inputs_embeds` have to be
input (see `past_key_values`). This is useful if you want more control over how to convert
`decoder_input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
If `decoder_input_ids` and `decoder_inputs_embeds` are both unset, `decoder_inputs_embeds` takes the value
of `inputs_embeds`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
LONGT5_ENCODER_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. LongT5 is a model with relative position embeddings so
you should be able to pad the inputs on both the right and the left.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for detail.
To know more on how to prepare `input_ids` for pretraining take a look a [LONGT5
Training](./longt5#training).
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# Warning message for FutureWarning: head_mask was separated into two input args - head_mask, decoder_head_mask
__HEAD_MASK_WARNING_MSG = """
The input argument `head_mask` was split into two arguments `head_mask` and `decoder_head_mask`. Currently,
`decoder_head_mask` is set to copy `head_mask`, but this feature is deprecated and will be removed in future versions.
If you do not want to use any `decoder_head_mask` now, please set `decoder_head_mask = torch.ones(num_layers,
num_heads)`.
"""
@add_start_docstrings(
"The bare LONGT5 Model transformer outputting raw hidden-states without any specific head on top.",
LONGT5_START_DOCSTRING,
)
class LongT5Model(LongT5PreTrainedModel):
_keys_to_ignore_on_load_missing = [
r"encoder.embed_tokens.weight",
r"decoder.embed_tokens.weight",
]
_keys_to_ignore_on_load_unexpected = [
r"decoder.block.0.layer.1.EncDecAttention.relative_attention_bias.weight",
]
def __init__(self, config: LongT5Config):
super().__init__(config)
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.is_decoder = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = LongT5Stack(encoder_config, self.shared)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = config.num_decoder_layers
self.decoder = LongT5Stack(decoder_config, self.shared)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
self.decoder.set_input_embeddings(new_embeddings)
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(LONGT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, LongT5Model
>>> tokenizer = AutoTokenizer.from_pretrained("google/long-t5-local-base")
>>> model = LongT5Model.from_pretrained("google/long-t5-local-base")
>>> # Let's try a very long encoder input.
>>> input_ids = tokenizer(
... 100 * "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="pt").input_ids # Batch size 1
>>> # forward pass
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# FutureWarning: head_mask was separated into two input args - head_mask, decoder_head_mask
if head_mask is not None and decoder_head_mask is None:
if self.config.num_layers == self.config.num_decoder_layers:
warnings.warn(__HEAD_MASK_WARNING_MSG, FutureWarning)
decoder_head_mask = head_mask
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
hidden_states = encoder_outputs[0]
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
inputs_embeds=decoder_inputs_embeds,
past_key_values=past_key_values,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return Seq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings("""LONGT5 Model with a `language modeling` head on top.""", LONGT5_START_DOCSTRING)
class LongT5ForConditionalGeneration(LongT5PreTrainedModel):
_keys_to_ignore_on_load_missing = [
r"encoder.embed_tokens.weight",
r"decoder.embed_tokens.weight",
r"lm_head.weight",
]
_keys_to_ignore_on_load_unexpected = [
r"decoder.block.0.layer.1.EncDecAttention.relative_attention_bias.weight",
]
def __init__(self, config: LongT5Config):
super().__init__(config)
self.model_dim = config.d_model
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.is_decoder = False
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = LongT5Stack(encoder_config, self.shared)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
decoder_config.num_layers = config.num_decoder_layers
self.decoder = LongT5Stack(decoder_config, self.shared)
self.lm_head = nn.Linear(config.d_model, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
self.decoder.set_input_embeddings(new_embeddings)
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def get_output_embeddings(self):
return self.lm_head
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(LONGT5_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
decoder_head_mask: Optional[torch.FloatTensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[Tuple[torch.Tensor]]] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], Seq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[-100, 0, ...,
config.vocab_size - 1]`. All labels set to `-100` are ignored (masked), the loss is only computed for
labels in `[0, ..., config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, LongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("Stancld/longt5-tglobal-large-16384-pubmed-3k_steps")
>>> model = LongT5ForConditionalGeneration.from_pretrained(
... "Stancld/longt5-tglobal-large-16384-pubmed-3k_steps"
... )
>>> # Let's try a very long input.
>>> inputs = tokenizer(100 * "studies have shown that owning a dog is good for you ", return_tensors="pt")
>>> input_ids = inputs.input_ids
>>> outputs = model.generate(input_ids)
>>> print(tokenizer.decode(outputs[0], skip_special_tokens=True))
abstractthe aim of this article is to provide an overview of the literature on the role of dog
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# FutureWarning: head_mask was separated into two input args - head_mask, decoder_head_mask
if head_mask is not None and decoder_head_mask is None:
if self.config.num_layers == self.config.num_decoder_layers:
warnings.warn(__HEAD_MASK_WARNING_MSG, FutureWarning)
decoder_head_mask = head_mask
# Encode if needed (training, first prediction pass)
if encoder_outputs is None:
# Convert encoder inputs in embeddings if needed
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
hidden_states = encoder_outputs[0]
if labels is not None and decoder_input_ids is None and decoder_inputs_embeds is None:
# get decoder inputs from shifting lm labels to the right
decoder_input_ids = self._shift_right(labels)
# Decode
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
inputs_embeds=decoder_inputs_embeds,
past_key_values=past_key_values,
encoder_hidden_states=hidden_states,
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = decoder_outputs[0]
if self.config.tie_word_embeddings:
# Rescale output before projecting on vocab
# See https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/transformer/transformer.py#L586
sequence_output = sequence_output * (self.model_dim**-0.5)
lm_logits = self.lm_head(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss(ignore_index=-100)
loss = loss_fct(lm_logits.view(-1, lm_logits.size(-1)), labels.view(-1))
# TODO(thom): Add z_loss https://github.com/tensorflow/mesh/blob/fa19d69eafc9a482aff0b59ddd96b025c0cb207d/mesh_tensorflow/layers.py#L666
if not return_dict:
output = (lm_logits,) + decoder_outputs[1:] + encoder_outputs
return ((loss,) + output) if loss is not None else output
return Seq2SeqLMOutput(
loss=loss,
logits=lm_logits,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
def prepare_inputs_for_generation(
self,
input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
# cut decoder_input_ids if past is used
if past_key_values is not None:
input_ids = input_ids[:, -1:]
return {
"decoder_input_ids": input_ids,
"past_key_values": past_key_values,
"encoder_outputs": encoder_outputs,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache,
}
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return self._shift_right(labels)
def _reorder_cache(self, past_key_values, beam_idx):
# if decoder past is not included in output
# speedy decoding is disabled and no need to reorder
if past_key_values is None:
logger.warning("You might want to consider setting `use_cache=True` to speed up decoding")
return past_key_values
reordered_decoder_past = ()
for layer_past_states in past_key_values:
# get the correct batch idx from layer past batch dim
# batch dim of `past` is at 2nd position
reordered_layer_past_states = ()
for layer_past_state in layer_past_states:
# need to set correct `past` for each of the four key / value states
reordered_layer_past_states = reordered_layer_past_states + (
layer_past_state.index_select(0, beam_idx.to(layer_past_state.device)),
)
assert reordered_layer_past_states[0].shape == layer_past_states[0].shape
assert len(reordered_layer_past_states) == len(layer_past_states)
reordered_decoder_past = reordered_decoder_past + (reordered_layer_past_states,)
return reordered_decoder_past
@add_start_docstrings(
"The bare LONGT5 Model transformer outputting encoder's raw hidden-states without any specific head on top.",
LONGT5_START_DOCSTRING,
)
class LongT5EncoderModel(LongT5PreTrainedModel):
_keys_to_ignore_on_load_missing = [r"encoder.embed_tokens.weight"]
def __init__(self, config: LongT5Config):
super().__init__(config)
self.shared = nn.Embedding(config.vocab_size, config.d_model)
encoder_config = copy.deepcopy(config)
encoder_config.use_cache = False
encoder_config.is_encoder_decoder = False
self.encoder = LongT5Stack(encoder_config, self.shared)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.shared
def set_input_embeddings(self, new_embeddings):
self.shared = new_embeddings
self.encoder.set_input_embeddings(new_embeddings)
def get_encoder(self):
return self.encoder
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(LONGT5_ENCODER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], BaseModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, LongT5ForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("google/long-t5-local-base")
>>> model = LongT5EncoderModel.from_pretrained("google/long-t5-local-base")
>>> input_ids = tokenizer(
... 100 * "Studies have been shown that owning a dog is good for you ", return_tensors="pt"
... ).input_ids # Batch size 1
>>> outputs = model(input_ids=input_ids)
>>> last_hidden_states = outputs.last_hidden_state
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
return encoder_outputs
|
233zzh/TitanDataOperationSystem | 2,381 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/retention/function/ActivityRetentionFunction.scala | package cn.edu.neu.titan.titanSpark.migration.retention.function
import java.sql.{Connection, DriverManager}
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.common.utils.ColumnNameUtils
import cn.edu.neu.titan.titanSpark.migration.retention.function.commonFunc.InitialInsertSql
import cn.edu.neu.titan.titanSpark.migration.{connectionProperties, currentDate, driver, spark, tbCVJoin, url}
/**
* Created by IntelliJ IDEA.
*
* @Author: Zhao Lei
* @Email: 1176066749@qq.com
* @Date: 2020/7/19
* @Time: 18:17
* @Version: 1.0
* @Description:
*/
object ActivityRetentionFunction {
def migrate(): Unit = {
val tbSource = Constants.HIVE_TABLE_ADS_APL_UCA
val tbTarget = Constants.MYSQL_TABLE_RETENTION_ACTIVE
Class.forName(driver)
val connection: Connection = DriverManager.getConnection(url, connectionProperties)
//插入前一天的数据，默认值全部都是 0
val sql_insert_today = InitialInsertSql.getActiveInitial(currentDate)
//选出活跃天数发生变化的数据，即：currentDate - dt = nrt_days 的数据
val sql_select_changed = s"SELECT dt, continuous_category, count " +
s"FROM $tbSource uca_rec " +
s"WHERE dt = '$currentDate'"
println(sql_insert_today)
println(sql_select_changed)
//1. 先把前一天的默认数据(留存天数都为0)插入mysql横表
spark.sql(sql_insert_today).toDF("activity_date", "1_day_active_num", "2_day_active_num", "3_day_active_num", "4_day_active_num", "5_day_active_num",
"6_day_active_num", "7_day_active_num", "7p_day_active_num")
.write.
mode("append").
jdbc(url, tbTarget, connectionProperties)
//2.查询hive纵表，找出留存天数发生变化的数据
val df = spark.sql(sql_select_changed)
//3.将发生变化的数据更新到mysql横表
df.rdd.collect.foreach(row => {
val dt = row.getAs[String]("dt")
val continuous_category = row.getAs[String]("continuous_category")
val rt_count = row.getAs[Int]("count")
val sql_update = s"UPDATE $tbTarget " +
s"SET ${ColumnNameUtils.getActiveColumn(continuous_category)} = $rt_count " +
s"WHERE activity_date = '$dt'"
connection.createStatement().execute(sql_update)
})
}
def main(args: Array[String]): Unit = {
migrate()
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 8,481 | src/transformers/models/longt5/configuration_longt5.py | # coding=utf-8
# Copyright 2022, The LongT5 Authors and HuggingFace Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" LongT5 model configuration"""
from typing import Mapping
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxSeq2SeqConfigWithPast
from ...utils import logging
logger = logging.get_logger(__name__)
LONGT5_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"google/long-t5-local-base": "https://huggingface.co/google/long-t5-local-base/blob/main/config.json",
"google/long-t5-local-large": "https://huggingface.co/google/long-t5-local-large/blob/main/config.json",
"google/long-t5-tglobal-base": "https://huggingface.co/google/long-t5-tglobal-base/blob/main/config.json",
"google/long-t5-tglobal-large": "https://huggingface.co/google/long-t5-tglobal-large/blob/main/config.json",
}
class LongT5Config(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`LongT5Model`] or a [`FlaxLongT5Model`]. It is
used to instantiate a LongT5 model according to the specified arguments, defining the model architecture.
Instantiating a configuration with the defaults will yield a similar configuration to that of the LongT5
[google/long-t5-local-base](https://huggingface.co/google/long-t5-local-base) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Arguments:
vocab_size (`int`, *optional*, defaults to 32128):
Vocabulary size of the LongT5 model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`LongT5Model`].
d_model (`int`, *optional*, defaults to 512):
Size of the encoder layers and the pooler layer.
d_kv (`int`, *optional*, defaults to 64):
Size of the key, query, value projections per attention head. `d_kv` has to be equal to `d_model //
num_heads`.
d_ff (`int`, *optional*, defaults to 2048):
Size of the intermediate feed forward layer in each `LongT5Block`.
num_layers (`int`, *optional*, defaults to 6):
Number of hidden layers in the Transformer encoder.
num_decoder_layers (`int`, *optional*):
Number of hidden layers in the Transformer decoder. Will use the same value as `num_layers` if not set.
num_heads (`int`, *optional*, defaults to 8):
Number of attention heads for each attention layer in the Transformer encoder.
local_radius (`int`, *optional*, defaults to 127)
Number of tokens to the left/right for each token to locally self-attend in a local attention mechanism.
global_block_size (`int`, *optional*, defaults to 16)
Lenght of blocks an input sequence is divided into for a global token representation. Used only for
`encoder_attention_type = "transient-global"`.
relative_attention_num_buckets (`int`, *optional*, defaults to 32):
The number of buckets to use for each attention layer.
relative_attention_max_distance (`int`, *optional*, defaults to 128):
The maximum distance of the longer sequences for the bucket separation.
dropout_rate (`float`, *optional*, defaults to 0.1):
The ratio for all dropout layers.
layer_norm_eps (`float`, *optional*, defaults to 1e-6):
The epsilon used by the layer normalization layers.
initializer_factor (`float`, *optional*, defaults to 1):
A factor for initializing all weight matrices (should be kept to 1, used internally for initialization
testing).
feed_forward_proj (`string`, *optional*, defaults to `"relu"`):
Type of feed forward layer to be used. Should be one of `"relu"` or `"gated-gelu"`. LongT5v1.1 uses the
`"gated-gelu"` feed forward projection. Original LongT5 implementation uses `"gated-gelu"`.
encoder_attention_type (`string`, *optional*, defaults to `"local"`):
Type of encoder attention to be used. Should be one of `"local"` or `"transient-global"`, which are
supported by LongT5 implementation.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
"""
model_type = "longt5"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {"hidden_size": "d_model", "num_attention_heads": "num_heads", "num_hidden_layers": "num_layers"}
def __init__(
self,
vocab_size=32128,
d_model=512,
d_kv=64,
d_ff=2048,
num_layers=6,
num_decoder_layers=None,
num_heads=8,
local_radius=127,
global_block_size=16,
relative_attention_num_buckets=32,
relative_attention_max_distance=128,
dropout_rate=0.1,
layer_norm_epsilon=1e-6,
initializer_factor=1.0,
feed_forward_proj="relu",
is_encoder_decoder=True,
encoder_attention_type="local",
use_cache=True,
pad_token_id=0,
eos_token_id=1,
**kwargs,
):
self.vocab_size = vocab_size
self.d_model = d_model
self.d_kv = d_kv
self.d_ff = d_ff
self.num_layers = num_layers
# default = symmetry
self.num_decoder_layers = num_decoder_layers if num_decoder_layers is not None else self.num_layers
self.num_heads = num_heads
self.local_radius = local_radius
self.global_block_size = global_block_size
self.relative_attention_num_buckets = relative_attention_num_buckets
self.relative_attention_max_distance = relative_attention_max_distance
self.dropout_rate = dropout_rate
self.layer_norm_epsilon = layer_norm_epsilon
self.initializer_factor = initializer_factor
self.feed_forward_proj = feed_forward_proj
self.encoder_attention_type = encoder_attention_type
self.use_cache = use_cache
act_info = self.feed_forward_proj.split("-")
self.dense_act_fn = act_info[-1]
self.is_gated_act = act_info[0] == "gated"
if len(act_info) > 1 and act_info[0] != "gated" or len(act_info) > 2:
raise ValueError(
f"`feed_forward_proj`: {feed_forward_proj} is not a valid activation function of the dense layer."
"Please make sure `feed_forward_proj` is of the format `gated-{ACT_FN}` or `{ACT_FN}`, e.g. "
"'gated-gelu' or 'relu'"
)
# for backwards compatibility
if feed_forward_proj == "gated-gelu":
self.dense_act_fn = "gelu_new"
super().__init__(
pad_token_id=pad_token_id,
eos_token_id=eos_token_id,
is_encoder_decoder=is_encoder_decoder,
**kwargs,
)
class LongT5OnnxConfig(OnnxSeq2SeqConfigWithPast):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
common_inputs = {
"input_ids": {0: "batch", 1: "encoder_sequence"},
"attention_mask": {0: "batch", 1: "encoder_sequence"},
}
if self.use_past:
common_inputs["attention_mask"][1] = "past_encoder_sequence + sequence"
common_inputs["decoder_input_ids"] = {0: "batch"}
common_inputs["decoder_attention_mask"] = {0: "batch", 1: "past_decoder_sequence + sequence"}
else:
common_inputs["decoder_input_ids"] = {0: "batch", 1: "decoder_sequence"}
common_inputs["decoder_attention_mask"] = {0: "batch", 1: "decoder_sequence"}
if self.use_past:
self.fill_with_past_key_values_(common_inputs, direction="inputs")
return common_inputs
@property
def default_onnx_opset(self) -> int:
return 13
|
27182812/ChatGLM-LLaMA-chinese-insturct | 4,604 | src/transformers/models/mobilebert/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_mobilebert": [
"MOBILEBERT_PRETRAINED_CONFIG_ARCHIVE_MAP",
"MobileBertConfig",
"MobileBertOnnxConfig",
],
"tokenization_mobilebert": ["MobileBertTokenizer"],
}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_mobilebert_fast"] = ["MobileBertTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_mobilebert"] = [
"MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"MobileBertForMaskedLM",
"MobileBertForMultipleChoice",
"MobileBertForNextSentencePrediction",
"MobileBertForPreTraining",
"MobileBertForQuestionAnswering",
"MobileBertForSequenceClassification",
"MobileBertForTokenClassification",
"MobileBertLayer",
"MobileBertModel",
"MobileBertPreTrainedModel",
"load_tf_weights_in_mobilebert",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_mobilebert"] = [
"TF_MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFMobileBertForMaskedLM",
"TFMobileBertForMultipleChoice",
"TFMobileBertForNextSentencePrediction",
"TFMobileBertForPreTraining",
"TFMobileBertForQuestionAnswering",
"TFMobileBertForSequenceClassification",
"TFMobileBertForTokenClassification",
"TFMobileBertMainLayer",
"TFMobileBertModel",
"TFMobileBertPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_mobilebert import (
MOBILEBERT_PRETRAINED_CONFIG_ARCHIVE_MAP,
MobileBertConfig,
MobileBertOnnxConfig,
)
from .tokenization_mobilebert import MobileBertTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_mobilebert_fast import MobileBertTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_mobilebert import (
MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST,
MobileBertForMaskedLM,
MobileBertForMultipleChoice,
MobileBertForNextSentencePrediction,
MobileBertForPreTraining,
MobileBertForQuestionAnswering,
MobileBertForSequenceClassification,
MobileBertForTokenClassification,
MobileBertLayer,
MobileBertModel,
MobileBertPreTrainedModel,
load_tf_weights_in_mobilebert,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_mobilebert import (
TF_MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST,
TFMobileBertForMaskedLM,
TFMobileBertForMultipleChoice,
TFMobileBertForNextSentencePrediction,
TFMobileBertForPreTraining,
TFMobileBertForQuestionAnswering,
TFMobileBertForSequenceClassification,
TFMobileBertForTokenClassification,
TFMobileBertMainLayer,
TFMobileBertModel,
TFMobileBertPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
233zzh/TitanDataOperationSystem | 3,179 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/retention/function/commonFunc/MonthRetentionFunction.scala | package cn.edu.neu.titan.titanSpark.migration.retention.function.commonFunc
import java.sql.{Connection, DriverManager}
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.common.utils.ColumnNameUtils
import cn.edu.neu.titan.titanSpark.migration._
/**
* Created by IntelliJ IDEA.
*
* @Author: Zhao Lei
* @Email: 1176066749@qq.com
* @Date: 2020/7/14
* @Time: 11:23
* @Version: 1.0
* @Description: 每月更新活跃/新增用户留存的 mysql 表，更新规则是：
* 1. 先把上一月的默认数据(留存天数都为0)插入mysql横表
* 2.查询hive纵表，找出留存月数发生变化的数据
* 3.将发生变化的数据更新到mysql横表
*/
object MonthRetentionFunction {
def migrate(tbSource: String, tbTarget: String, monthColumn: String, countColumn: String): Unit = {
Class.forName(driver)
val connection: Connection = DriverManager.getConnection(url, connectionProperties)
//插入上月的数据，默认值全部都是0
val sql_insert_currentMonth = InitialInsertSql.getRetentionInitial(currentMonth)
//选出活跃用户留存天数发生变化的数据，即：months_between(currentMonth, dt) = art_months 的数据
val sql_select_changed = s"SELECT dt, cId channel_id, vId version_id, $monthColumn, $countColumn " +
s"FROM $tbSource rt_rec JOIN $tbCVJoin cv ON rt_rec.version = cv.vname and rt_rec.channel = cv.cname " +
s"WHERE months_between('$currentMonth', dt) = $monthColumn"
println(sql_select_changed)
//1. 先把上个月的默认数据(留存约束都为0）插入到mysql横表
spark.sql(sql_insert_currentMonth).toDF("retention_date", "channel_id", "version_id", "1_month_after_num", "2_month_after_num", "3_month_after_num", "4_month_after_num", "5_month_after_num",
"6_month_after_num", "7_month_after_num", "8_month_after_num", "9_month_after_num")
.write
.mode("append")
.jdbc(url, tbTarget, connectionProperties)
//2.查询hive纵表，找出留存月数发生变化的数据
val df = spark.sql(sql_select_changed)
df.show(1000)
//3.将发生变化的数据更新到mysql横表
df.rdd.collect.foreach(row => {
val dt = row.getAs[String]("dt")
val channel_id = row.getAs[Int]("channel_id")
val version_id = row.getAs[Int]("version_id")
val rt_months = row.getAs[Int](monthColumn)
val rt_count = row.getAs[Int](countColumn)
val sql = s"UPDATE $tbTarget " +
s"SET ${ColumnNameUtils.getRetentionMonthColumn(rt_months)} = $rt_count " +
s"WHERE retention_date = '$dt' AND " +
s"version_id = $version_id " +
s"AND " +
s"channel_id = $channel_id"
connection.createStatement().execute(sql)
})
}
def main(args: Array[String]): Unit = {
val mnrtSource = Constants.HIVE_TABLE_ADS_APL_MNRT_REC
val mnrtTarget = Constants.MYSQL_TABLE_RETENTION_INSTALLATION_MONTH
val martSource = Constants.HIVE_TABLE_ADS_APL_MART_REC
val martTarget = Constants.MYSQL_TABLE_RETENTION_ACTIVE_MONTH
migrate(mnrtSource, mnrtTarget, "nrt_months", "nrt_count")
migrate(martSource, martTarget, "art_months", "art_count")
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,200 | src/transformers/models/mobilebert/convert_mobilebert_original_tf_checkpoint_to_pytorch.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import argparse
import torch
from transformers import MobileBertConfig, MobileBertForPreTraining, load_tf_weights_in_mobilebert
from transformers.utils import logging
logging.set_verbosity_info()
def convert_tf_checkpoint_to_pytorch(tf_checkpoint_path, mobilebert_config_file, pytorch_dump_path):
# Initialise PyTorch model
config = MobileBertConfig.from_json_file(mobilebert_config_file)
print(f"Building PyTorch model from configuration: {config}")
model = MobileBertForPreTraining(config)
# Load weights from tf checkpoint
model = load_tf_weights_in_mobilebert(model, config, tf_checkpoint_path)
# Save pytorch-model
print(f"Save PyTorch model to {pytorch_dump_path}")
torch.save(model.state_dict(), pytorch_dump_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--tf_checkpoint_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--mobilebert_config_file",
default=None,
type=str,
required=True,
help=(
"The config json file corresponding to the pre-trained MobileBERT model. \n"
"This specifies the model architecture."
),
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_tf_checkpoint_to_pytorch(args.tf_checkpoint_path, args.mobilebert_config_file, args.pytorch_dump_path)
|
233zzh/TitanDataOperationSystem | 1,067 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/retention/function/commonFunc/InitialInsertSql.scala | package cn.edu.neu.titan.titanSpark.migration.retention.function.commonFunc
import cn.edu.neu.titan.titanSpark.migration.tbCVJoin
/**
* Created by IntelliJ IDEA.
*
* @Author: Zhao Lei
* @Email: 1176066749@qq.com
* @Date: 2020/7/13
* @Time: 16:08
* @Version: 1.0
* @Description: 返回初始化留存表中每一天/周/月的 sql 语句，所谓初始化就是把留存数都设置为 0
*/
object InitialInsertSql {
def getRetentionInitial(date: String): String = {
val sql = s"SELECT * FROM " +
s"(SELECT '$date' dt) dt, " +
s"(SELECT cid, vid FROM $tbCVJoin) cvId, " + //只需要版本id和渠道id，不用name
s"(SELECT 0 as rt_1, 0 as rt_2, 0 as rt_3, 0 as rt_4, 0 as rt_5, 0 as rt_6, 0 as rt_7, 0 as rt_8, 0 as rt_9) rt"
sql
}
def getActiveInitial(date: String): String = {
val sql = s"SELECT '$date' as activity_date, 0 as 1_day_active_num, 0 as 2_day_active_num, 0 as 3_day_active_num, " +
s"0 as 4_day_active_num, 0 as 5_day_active_num, 0 as 6_day_active_num, 0 as 7_day_active_num, 0 as 7p_day_active_num"
sql
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 70,777 | src/transformers/models/mobilebert/modeling_mobilebert.py | # MIT License
#
# Copyright (c) 2020 The Google AI Language Team Authors, The HuggingFace Inc. team and github/lonePatient
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in all
# copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
# SOFTWARE.
import math
import os
import warnings
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPooling,
MaskedLMOutput,
MultipleChoiceModelOutput,
NextSentencePredictorOutput,
QuestionAnsweringModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_mobilebert import MobileBertConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/mobilebert-uncased"
_CONFIG_FOR_DOC = "MobileBertConfig"
# TokenClassification docstring
_CHECKPOINT_FOR_TOKEN_CLASSIFICATION = "mrm8488/mobilebert-finetuned-ner"
_TOKEN_CLASS_EXPECTED_OUTPUT = "['I-ORG', 'I-ORG', 'O', 'O', 'O', 'O', 'O', 'I-LOC', 'O', 'I-LOC', 'I-LOC']"
_TOKEN_CLASS_EXPECTED_LOSS = 0.03
# QuestionAnswering docstring
_CHECKPOINT_FOR_QA = "csarron/mobilebert-uncased-squad-v2"
_QA_EXPECTED_OUTPUT = "'a nice puppet'"
_QA_EXPECTED_LOSS = 3.98
_QA_TARGET_START_INDEX = 12
_QA_TARGET_END_INDEX = 13
# SequenceClassification docstring
_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION = "lordtt13/emo-mobilebert"
_SEQ_CLASS_EXPECTED_OUTPUT = "'others'"
_SEQ_CLASS_EXPECTED_LOSS = "4.72"
MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST = ["google/mobilebert-uncased"]
def load_tf_weights_in_mobilebert(model, config, tf_checkpoint_path):
"""Load tf checkpoints in a pytorch model."""
try:
import re
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_path = os.path.abspath(tf_checkpoint_path)
logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
# Load weights from TF model
init_vars = tf.train.list_variables(tf_path)
names = []
arrays = []
for name, shape in init_vars:
logger.info(f"Loading TF weight {name} with shape {shape}")
array = tf.train.load_variable(tf_path, name)
names.append(name)
arrays.append(array)
for name, array in zip(names, arrays):
name = name.replace("ffn_layer", "ffn")
name = name.replace("FakeLayerNorm", "LayerNorm")
name = name.replace("extra_output_weights", "dense/kernel")
name = name.replace("bert", "mobilebert")
name = name.split("/")
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
# which are not required for using pretrained model
if any(
n in ["adam_v", "adam_m", "AdamWeightDecayOptimizer", "AdamWeightDecayOptimizer_1", "global_step"]
for n in name
):
logger.info(f"Skipping {'/'.join(name)}")
continue
pointer = model
for m_name in name:
if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
scope_names = re.split(r"_(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "kernel" or scope_names[0] == "gamma":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "output_bias" or scope_names[0] == "beta":
pointer = getattr(pointer, "bias")
elif scope_names[0] == "output_weights":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "squad":
pointer = getattr(pointer, "classifier")
else:
try:
pointer = getattr(pointer, scope_names[0])
except AttributeError:
logger.info(f"Skipping {'/'.join(name)}")
continue
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
if m_name[-11:] == "_embeddings":
pointer = getattr(pointer, "weight")
elif m_name == "kernel":
array = np.transpose(array)
try:
assert (
pointer.shape == array.shape
), f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched"
except AssertionError as e:
e.args += (pointer.shape, array.shape)
raise
logger.info(f"Initialize PyTorch weight {name}")
pointer.data = torch.from_numpy(array)
return model
class NoNorm(nn.Module):
def __init__(self, feat_size, eps=None):
super().__init__()
self.bias = nn.Parameter(torch.zeros(feat_size))
self.weight = nn.Parameter(torch.ones(feat_size))
def forward(self, input_tensor: torch.Tensor) -> torch.Tensor:
return input_tensor * self.weight + self.bias
NORM2FN = {"layer_norm": nn.LayerNorm, "no_norm": NoNorm}
class MobileBertEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config):
super().__init__()
self.trigram_input = config.trigram_input
self.embedding_size = config.embedding_size
self.hidden_size = config.hidden_size
self.word_embeddings = nn.Embedding(config.vocab_size, config.embedding_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
embed_dim_multiplier = 3 if self.trigram_input else 1
embedded_input_size = self.embedding_size * embed_dim_multiplier
self.embedding_transformation = nn.Linear(embedded_input_size, config.hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.register_buffer("position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)))
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
) -> torch.Tensor:
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, :seq_length]
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
if self.trigram_input:
# From the paper MobileBERT: a Compact Task-Agnostic BERT for Resource-Limited
# Devices (https://arxiv.org/abs/2004.02984)
#
# The embedding table in BERT models accounts for a substantial proportion of model size. To compress
# the embedding layer, we reduce the embedding dimension to 128 in MobileBERT.
# Then, we apply a 1D convolution with kernel size 3 on the raw token embedding to produce a 512
# dimensional output.
inputs_embeds = torch.cat(
[
nn.functional.pad(inputs_embeds[:, 1:], [0, 0, 0, 1, 0, 0], value=0.0),
inputs_embeds,
nn.functional.pad(inputs_embeds[:, :-1], [0, 0, 1, 0, 0, 0], value=0.0),
],
dim=2,
)
if self.trigram_input or self.embedding_size != self.hidden_size:
inputs_embeds = self.embedding_transformation(inputs_embeds)
# Add positional embeddings and token type embeddings, then layer
# normalize and perform dropout.
position_embeddings = self.position_embeddings(position_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + position_embeddings + token_type_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class MobileBertSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.true_hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.true_hidden_size, self.all_head_size)
self.key = nn.Linear(config.true_hidden_size, self.all_head_size)
self.value = nn.Linear(
config.true_hidden_size if config.use_bottleneck_attention else config.hidden_size, self.all_head_size
)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
query_tensor: torch.Tensor,
key_tensor: torch.Tensor,
value_tensor: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(query_tensor)
mixed_key_layer = self.key(key_tensor)
mixed_value_layer = self.value(value_tensor)
query_layer = self.transpose_for_scores(mixed_query_layer)
key_layer = self.transpose_for_scores(mixed_key_layer)
value_layer = self.transpose_for_scores(mixed_value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BertModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class MobileBertSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.use_bottleneck = config.use_bottleneck
self.dense = nn.Linear(config.true_hidden_size, config.true_hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.true_hidden_size, eps=config.layer_norm_eps)
if not self.use_bottleneck:
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, residual_tensor: torch.Tensor) -> torch.Tensor:
layer_outputs = self.dense(hidden_states)
if not self.use_bottleneck:
layer_outputs = self.dropout(layer_outputs)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class MobileBertAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.self = MobileBertSelfAttention(config)
self.output = MobileBertSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
query_tensor: torch.Tensor,
key_tensor: torch.Tensor,
value_tensor: torch.Tensor,
layer_input: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
query_tensor,
key_tensor,
value_tensor,
attention_mask,
head_mask,
output_attentions,
)
# Run a linear projection of `hidden_size` then add a residual
# with `layer_input`.
attention_output = self.output(self_outputs[0], layer_input)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class MobileBertIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.true_hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class OutputBottleneck(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.true_hidden_size, config.hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, residual_tensor: torch.Tensor) -> torch.Tensor:
layer_outputs = self.dense(hidden_states)
layer_outputs = self.dropout(layer_outputs)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class MobileBertOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.use_bottleneck = config.use_bottleneck
self.dense = nn.Linear(config.intermediate_size, config.true_hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.true_hidden_size)
if not self.use_bottleneck:
self.dropout = nn.Dropout(config.hidden_dropout_prob)
else:
self.bottleneck = OutputBottleneck(config)
def forward(
self, intermediate_states: torch.Tensor, residual_tensor_1: torch.Tensor, residual_tensor_2: torch.Tensor
) -> torch.Tensor:
layer_output = self.dense(intermediate_states)
if not self.use_bottleneck:
layer_output = self.dropout(layer_output)
layer_output = self.LayerNorm(layer_output + residual_tensor_1)
else:
layer_output = self.LayerNorm(layer_output + residual_tensor_1)
layer_output = self.bottleneck(layer_output, residual_tensor_2)
return layer_output
class BottleneckLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intra_bottleneck_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.intra_bottleneck_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
layer_input = self.dense(hidden_states)
layer_input = self.LayerNorm(layer_input)
return layer_input
class Bottleneck(nn.Module):
def __init__(self, config):
super().__init__()
self.key_query_shared_bottleneck = config.key_query_shared_bottleneck
self.use_bottleneck_attention = config.use_bottleneck_attention
self.input = BottleneckLayer(config)
if self.key_query_shared_bottleneck:
self.attention = BottleneckLayer(config)
def forward(self, hidden_states: torch.Tensor) -> Tuple[torch.Tensor]:
# This method can return three different tuples of values. These different values make use of bottlenecks,
# which are linear layers used to project the hidden states to a lower-dimensional vector, reducing memory
# usage. These linear layer have weights that are learned during training.
#
# If `config.use_bottleneck_attention`, it will return the result of the bottleneck layer four times for the
# key, query, value, and "layer input" to be used by the attention layer.
# This bottleneck is used to project the hidden. This last layer input will be used as a residual tensor
# in the attention self output, after the attention scores have been computed.
#
# If not `config.use_bottleneck_attention` and `config.key_query_shared_bottleneck`, this will return
# four values, three of which have been passed through a bottleneck: the query and key, passed through the same
# bottleneck, and the residual layer to be applied in the attention self output, through another bottleneck.
#
# Finally, in the last case, the values for the query, key and values are the hidden states without bottleneck,
# and the residual layer will be this value passed through a bottleneck.
bottlenecked_hidden_states = self.input(hidden_states)
if self.use_bottleneck_attention:
return (bottlenecked_hidden_states,) * 4
elif self.key_query_shared_bottleneck:
shared_attention_input = self.attention(hidden_states)
return (shared_attention_input, shared_attention_input, hidden_states, bottlenecked_hidden_states)
else:
return (hidden_states, hidden_states, hidden_states, bottlenecked_hidden_states)
class FFNOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.true_hidden_size)
self.LayerNorm = NORM2FN[config.normalization_type](config.true_hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor, residual_tensor: torch.Tensor) -> torch.Tensor:
layer_outputs = self.dense(hidden_states)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class FFNLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.intermediate = MobileBertIntermediate(config)
self.output = FFNOutput(config)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
intermediate_output = self.intermediate(hidden_states)
layer_outputs = self.output(intermediate_output, hidden_states)
return layer_outputs
class MobileBertLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.use_bottleneck = config.use_bottleneck
self.num_feedforward_networks = config.num_feedforward_networks
self.attention = MobileBertAttention(config)
self.intermediate = MobileBertIntermediate(config)
self.output = MobileBertOutput(config)
if self.use_bottleneck:
self.bottleneck = Bottleneck(config)
if config.num_feedforward_networks > 1:
self.ffn = nn.ModuleList([FFNLayer(config) for _ in range(config.num_feedforward_networks - 1)])
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
) -> Tuple[torch.Tensor]:
if self.use_bottleneck:
query_tensor, key_tensor, value_tensor, layer_input = self.bottleneck(hidden_states)
else:
query_tensor, key_tensor, value_tensor, layer_input = [hidden_states] * 4
self_attention_outputs = self.attention(
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_mask,
head_mask,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
s = (attention_output,)
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
if self.num_feedforward_networks != 1:
for i, ffn_module in enumerate(self.ffn):
attention_output = ffn_module(attention_output)
s += (attention_output,)
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output, hidden_states)
outputs = (
(layer_output,)
+ outputs
+ (
torch.tensor(1000),
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_output,
intermediate_output,
)
+ s
)
return outputs
class MobileBertEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.layer = nn.ModuleList([MobileBertLayer(config) for _ in range(config.num_hidden_layers)])
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states,
attention_mask,
head_mask[i],
output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class MobileBertPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.do_activate = config.classifier_activation
if self.do_activate:
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
if not self.do_activate:
return first_token_tensor
else:
pooled_output = self.dense(first_token_tensor)
pooled_output = torch.tanh(pooled_output)
return pooled_output
class MobileBertPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = NORM2FN["layer_norm"](config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
class MobileBertLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = MobileBertPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.dense = nn.Linear(config.vocab_size, config.hidden_size - config.embedding_size, bias=False)
self.decoder = nn.Linear(config.embedding_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.transform(hidden_states)
hidden_states = hidden_states.matmul(torch.cat([self.decoder.weight.t(), self.dense.weight], dim=0))
hidden_states += self.decoder.bias
return hidden_states
class MobileBertOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = MobileBertLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
class MobileBertPreTrainingHeads(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = MobileBertLMPredictionHead(config)
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, sequence_output: torch.Tensor, pooled_output: torch.Tensor) -> Tuple[torch.Tensor]:
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class MobileBertPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MobileBertConfig
pretrained_model_archive_map = MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST
load_tf_weights = load_tf_weights_in_mobilebert
base_model_prefix = "mobilebert"
_keys_to_ignore_on_load_missing = [r"position_ids"]
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, (nn.LayerNorm, NoNorm)):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
@dataclass
class MobileBertForPreTrainingOutput(ModelOutput):
"""
Output type of [`MobileBertForPreTraining`].
Args:
loss (*optional*, returned when `labels` is provided, `torch.FloatTensor` of shape `(1,)`):
Total loss as the sum of the masked language modeling loss and the next sequence prediction
(classification) loss.
prediction_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`torch.FloatTensor` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
prediction_logits: torch.FloatTensor = None
seq_relationship_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
MOBILEBERT_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`MobileBertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MOBILEBERT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`BertTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare MobileBert Model transformer outputting raw hidden-states without any specific head on top.",
MOBILEBERT_START_DOCSTRING,
)
class MobileBertModel(MobileBertPreTrainedModel):
"""
https://arxiv.org/pdf/2004.02984.pdf
"""
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = MobileBertEmbeddings(config)
self.encoder = MobileBertEncoder(config)
self.pooler = MobileBertPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
output_hidden_states: Optional[bool] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
if token_type_ids is None:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids, position_ids=position_ids, token_type_ids=token_type_ids, inputs_embeds=inputs_embeds
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with two heads on top as done during the pretraining: a `masked language modeling` head and a
`next sentence prediction (classification)` head.
""",
MOBILEBERT_START_DOCSTRING,
)
class MobileBertForPreTraining(MobileBertPreTrainedModel):
_keys_to_ignore_on_load_missing = [
"cls.predictions.decoder.weight",
"cls.predictions.decoder.bias",
"embeddings.position_ids",
]
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config)
self.cls = MobileBertPreTrainingHeads(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddigs):
self.cls.predictions.decoder = new_embeddigs
def resize_token_embeddings(self, new_num_tokens: Optional[int] = None) -> nn.Embedding:
# resize dense output embedings at first
self.cls.predictions.dense = self._get_resized_lm_head(
self.cls.predictions.dense, new_num_tokens=new_num_tokens, transposed=True
)
return super().resize_token_embeddings(new_num_tokens=new_num_tokens)
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MobileBertForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
next_sentence_label: Optional[torch.LongTensor] = None,
output_attentions: Optional[torch.FloatTensor] = None,
output_hidden_states: Optional[torch.FloatTensor] = None,
return_dict: Optional[torch.FloatTensor] = None,
) -> Union[Tuple, MobileBertForPreTrainingOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
next_sentence_label (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the next sequence prediction (classification) loss. Input should be a sequence pair
(see `input_ids` docstring) Indices should be in `[0, 1]`:
- 0 indicates sequence B is a continuation of sequence A,
- 1 indicates sequence B is a random sequence.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, MobileBertForPreTraining
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = MobileBertForPreTraining.from_pretrained("google/mobilebert-uncased")
>>> input_ids = torch.tensor(tokenizer.encode("Hello, my dog is cute", add_special_tokens=True)).unsqueeze(0)
>>> # Batch size 1
>>> outputs = model(input_ids)
>>> prediction_logits = outputs.prediction_logits
>>> seq_relationship_logits = outputs.seq_relationship_logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output, pooled_output = outputs[:2]
prediction_scores, seq_relationship_score = self.cls(sequence_output, pooled_output)
total_loss = None
if labels is not None and next_sentence_label is not None:
loss_fct = CrossEntropyLoss()
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), next_sentence_label.view(-1))
total_loss = masked_lm_loss + next_sentence_loss
if not return_dict:
output = (prediction_scores, seq_relationship_score) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return MobileBertForPreTrainingOutput(
loss=total_loss,
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""MobileBert Model with a `language modeling` head on top.""", MOBILEBERT_START_DOCSTRING)
class MobileBertForMaskedLM(MobileBertPreTrainedModel):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
_keys_to_ignore_on_load_missing = [
"cls.predictions.decoder.weight",
"cls.predictions.decoder.bias",
"embeddings.position_ids",
]
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config, add_pooling_layer=False)
self.cls = MobileBertOnlyMLMHead(config)
self.config = config
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddigs):
self.cls.predictions.decoder = new_embeddigs
def resize_token_embeddings(self, new_num_tokens: Optional[int] = None) -> nn.Embedding:
# resize dense output embedings at first
self.cls.predictions.dense = self._get_resized_lm_head(
self.cls.predictions.dense, new_num_tokens=new_num_tokens, transposed=True
)
return super().resize_token_embeddings(new_num_tokens=new_num_tokens)
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
expected_output="'paris'",
expected_loss=0.57,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class MobileBertOnlyNSPHead(nn.Module):
def __init__(self, config):
super().__init__()
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, pooled_output: torch.Tensor) -> torch.Tensor:
seq_relationship_score = self.seq_relationship(pooled_output)
return seq_relationship_score
@add_start_docstrings(
"""MobileBert Model with a `next sentence prediction (classification)` head on top.""",
MOBILEBERT_START_DOCSTRING,
)
class MobileBertForNextSentencePrediction(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config)
self.cls = MobileBertOnlyNSPHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=NextSentencePredictorOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[Tuple, NextSentencePredictorOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the next sequence prediction (classification) loss. Input should be a sequence pair
(see `input_ids` docstring) Indices should be in `[0, 1]`.
- 0 indicates sequence B is a continuation of sequence A,
- 1 indicates sequence B is a random sequence.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, MobileBertForNextSentencePrediction
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = MobileBertForNextSentencePrediction.from_pretrained("google/mobilebert-uncased")
>>> prompt = "In Italy, pizza served in formal settings, such as at a restaurant, is presented unsliced."
>>> next_sentence = "The sky is blue due to the shorter wavelength of blue light."
>>> encoding = tokenizer(prompt, next_sentence, return_tensors="pt")
>>> outputs = model(**encoding, labels=torch.LongTensor([1]))
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
if "next_sentence_label" in kwargs:
warnings.warn(
"The `next_sentence_label` argument is deprecated and will be removed in a future version, use"
" `labels` instead.",
FutureWarning,
)
labels = kwargs.pop("next_sentence_label")
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
seq_relationship_score = self.cls(pooled_output)
next_sentence_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), labels.view(-1))
if not return_dict:
output = (seq_relationship_score,) + outputs[2:]
return ((next_sentence_loss,) + output) if next_sentence_loss is not None else output
return NextSentencePredictorOutput(
loss=next_sentence_loss,
logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForSequenceClassification with Bert->MobileBert all-casing
class MobileBertForSequenceClassification(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.mobilebert = MobileBertModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_SEQ_CLASS_EXPECTED_OUTPUT,
expected_loss=_SEQ_CLASS_EXPECTED_LOSS,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a span classification head on top for extractive question-answering tasks like SQuAD (a
linear layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForQuestionAnswering with Bert->MobileBert all-casing
class MobileBertForQuestionAnswering(MobileBertPreTrainedModel):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.mobilebert = MobileBertModel(config, add_pooling_layer=False)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_QA,
output_type=QuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
qa_target_start_index=_QA_TARGET_START_INDEX,
qa_target_end_index=_QA_TARGET_END_INDEX,
expected_output=_QA_EXPECTED_OUTPUT,
expected_loss=_QA_EXPECTED_LOSS,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
start_positions: Optional[torch.Tensor] = None,
end_positions: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a multiple choice classification head on top (a linear layer on top of the pooled output and
a softmax) e.g. for RocStories/SWAG tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForMultipleChoice with Bert->MobileBert all-casing
class MobileBertForMultipleChoice(MobileBertPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.mobilebert = MobileBertModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(
MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], MultipleChoiceModelOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return MultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
MobileBert Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g.
for Named-Entity-Recognition (NER) tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_bert.BertForTokenClassification with Bert->MobileBert all-casing
class MobileBertForTokenClassification(MobileBertPreTrainedModel):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.mobilebert = MobileBertModel(config, add_pooling_layer=False)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_TOKEN_CLASSIFICATION,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_TOKEN_CLASS_EXPECTED_OUTPUT,
expected_loss=_TOKEN_CLASS_EXPECTED_LOSS,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
|
233zzh/TitanDataOperationSystem | 3,372 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/retention/function/commonFunc/WeekRetentionFunction.scala | package cn.edu.neu.titan.titanSpark.migration.retention.function.commonFunc
import java.sql.{Connection, DriverManager}
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.common.utils.{ColumnNameUtils, DateUtils}
import cn.edu.neu.titan.titanSpark.migration._
/**
* Created by IntelliJ IDEA.
*
* @Author: Zhao Lei
* @Email: 1176066749@qq.com
* @Date: 2020/7/14
* @Time: 9:05
* @Version: 1.0
* @Description: 每周更新活跃/新增用户留存的 mysql 表，更新规则是：
* 1. 先把上一周的默认数据(留存天数都为0)插入mysql横表
* 2.查询hive纵表，找出留存周数发生变化的数据
* 3.将发生变化的数据更新到mysql横表
*/
object WeekRetentionFunction {
def migrate(tbSource: String, tbTarget: String, weekColumn: String, countColumn: String): Unit = {
Class.forName(driver)
val connection: Connection = DriverManager.getConnection(url, connectionProperties)
//自定义udf，计算两个日期的间隔周数，在 mnrt 中没有自定义函数，是因为官方提供了计算月间隔的函数，而没有提供计算周间隔的函数
val weeksBetween = "weeksBetween"
spark.udf.register(weeksBetween, (startDate: String, endDate: String) => DateUtils.weeksBetween(startDate, endDate))
//插入本周的数据，默认值全部都是0
val sql_insert_currentWeek = InitialInsertSql.getRetentionInitial(currentWeek)
//选出活跃用户留存天数发生变化的数据，即：weeksBetween(currentWeek, dt) = art_weeks 的数据
val sql_select_changed = s"SELECT dt, cId channel_id, vId version_id, $weekColumn, $countColumn " +
s"FROM $tbSource rt_rec JOIN $tbCVJoin cv ON rt_rec.version = cv.vname and rt_rec.channel = cv.cname " +
s"WHERE $weeksBetween('$currentWeek', dt) = $weekColumn"
//1. 先把上一周的默认数据(留存天数都为0)插入mysql横表
spark.sql(sql_insert_currentWeek).toDF("retention_date", "channel_id", "version_id", "1_week_after_num", "2_week_after_num", "3_week_after_num", "4_week_after_num", "5_week_after_num",
"6_week_after_num", "7_week_after_num", "8_week_after_num", "9_week_after_num")
.write
.mode("append")
.jdbc(url, tbTarget, connectionProperties)
//2.查询hive纵表，找出留存周数发生变化的数据
val df = spark.sql(sql_select_changed)
//3.将发生变化的数据更新到mysql横表
df.rdd.collect.foreach(row => {
val dt = row.getAs[String]("dt")
val channel_id = row.getAs[Int]("channel_id")
val version_id = row.getAs[Int]("version_id")
val art_weeks = row.getAs[Int](weekColumn)
val art_count = row.getAs[Int](countColumn)
val sql = s"UPDATE $tbTarget " +
s"SET ${ColumnNameUtils.getRetentionWeekColumn(art_weeks)} = $art_count " +
s"WHERE retention_date = '$dt' AND " +
s"version_id = $version_id " +
s"AND " +
s"channel_id = $channel_id"
println(sql)
connection.createStatement().execute(sql)
})
}
def main(args: Array[String]): Unit = {
val wnrtSource = Constants.HIVE_TABLE_ADS_APL_WNRT_REC
val wnrtTarget = Constants.MYSQL_TABLE_RETENTION_INSTALLATION_WEEK
val wartSource = Constants.HIVE_TABLE_ADS_APL_WART_REC
val wartTarget = Constants.MYSQL_TABLE_RETENTION_ACTIVE_WEEK
migrate(wnrtSource, wnrtTarget, "nrt_weeks", "nrt_count")
migrate(wartSource, wartTarget, "art_weeks", "art_count")
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 20,742 | src/transformers/models/mobilebert/tokenization_mobilebert.py | # coding=utf-8
#
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for MobileBERT."""
import collections
import os
import unicodedata
from typing import List, Optional, Tuple
from ...tokenization_utils import PreTrainedTokenizer, _is_control, _is_punctuation, _is_whitespace
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {"mobilebert-uncased": "https://huggingface.co/google/mobilebert-uncased/resolve/main/vocab.txt"}
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"mobilebert-uncased": 512}
PRETRAINED_INIT_CONFIGURATION = {}
# Copied from transformers.models.bert.tokenization_bert.load_vocab
def load_vocab(vocab_file):
"""Loads a vocabulary file into a dictionary."""
vocab = collections.OrderedDict()
with open(vocab_file, "r", encoding="utf-8") as reader:
tokens = reader.readlines()
for index, token in enumerate(tokens):
token = token.rstrip("\n")
vocab[token] = index
return vocab
# Copied from transformers.models.bert.tokenization_bert.whitespace_tokenize
def whitespace_tokenize(text):
"""Runs basic whitespace cleaning and splitting on a piece of text."""
text = text.strip()
if not text:
return []
tokens = text.split()
return tokens
# Copied from transformers.models.bert.tokenization_bert.BertTokenizer with BERT->MobileBERT,Bert->MobileBert
class MobileBertTokenizer(PreTrainedTokenizer):
r"""
Construct a MobileBERT tokenizer. Based on WordPiece.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
File containing the vocabulary.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
do_basic_tokenize (`bool`, *optional*, defaults to `True`):
Whether or not to do basic tokenization before WordPiece.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
unk_token (`str`, *optional*, defaults to `"[UNK]"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"[PAD]"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original MobileBERT).
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
def __init__(
self,
vocab_file,
do_lower_case=True,
do_basic_tokenize=True,
never_split=None,
unk_token="[UNK]",
sep_token="[SEP]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
tokenize_chinese_chars=True,
strip_accents=None,
**kwargs,
):
super().__init__(
do_lower_case=do_lower_case,
do_basic_tokenize=do_basic_tokenize,
never_split=never_split,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
**kwargs,
)
if not os.path.isfile(vocab_file):
raise ValueError(
f"Can't find a vocabulary file at path '{vocab_file}'. To load the vocabulary from a Google pretrained"
" model use `tokenizer = MobileBertTokenizer.from_pretrained(PRETRAINED_MODEL_NAME)`"
)
self.vocab = load_vocab(vocab_file)
self.ids_to_tokens = collections.OrderedDict([(ids, tok) for tok, ids in self.vocab.items()])
self.do_basic_tokenize = do_basic_tokenize
if do_basic_tokenize:
self.basic_tokenizer = BasicTokenizer(
do_lower_case=do_lower_case,
never_split=never_split,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
)
self.wordpiece_tokenizer = WordpieceTokenizer(vocab=self.vocab, unk_token=self.unk_token)
@property
def do_lower_case(self):
return self.basic_tokenizer.do_lower_case
@property
def vocab_size(self):
return len(self.vocab)
def get_vocab(self):
return dict(self.vocab, **self.added_tokens_encoder)
def _tokenize(self, text):
split_tokens = []
if self.do_basic_tokenize:
for token in self.basic_tokenizer.tokenize(text, never_split=self.all_special_tokens):
# If the token is part of the never_split set
if token in self.basic_tokenizer.never_split:
split_tokens.append(token)
else:
split_tokens += self.wordpiece_tokenizer.tokenize(token)
else:
split_tokens = self.wordpiece_tokenizer.tokenize(text)
return split_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.vocab.get(token, self.vocab.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.ids_to_tokens.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = " ".join(tokens).replace(" ##", "").strip()
return out_string
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A MobileBERT sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is not None:
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A MobileBERT
sequence pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
index = 0
if os.path.isdir(save_directory):
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
else:
vocab_file = (filename_prefix + "-" if filename_prefix else "") + save_directory
with open(vocab_file, "w", encoding="utf-8") as writer:
for token, token_index in sorted(self.vocab.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {vocab_file}: vocabulary indices are not consecutive."
" Please check that the vocabulary is not corrupted!"
)
index = token_index
writer.write(token + "\n")
index += 1
return (vocab_file,)
# Copied from transformers.models.bert.tokenization_bert.BasicTokenizer
class BasicTokenizer(object):
"""
Constructs a BasicTokenizer that will run basic tokenization (punctuation splitting, lower casing, etc.).
Args:
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
"""
def __init__(self, do_lower_case=True, never_split=None, tokenize_chinese_chars=True, strip_accents=None):
if never_split is None:
never_split = []
self.do_lower_case = do_lower_case
self.never_split = set(never_split)
self.tokenize_chinese_chars = tokenize_chinese_chars
self.strip_accents = strip_accents
def tokenize(self, text, never_split=None):
"""
Basic Tokenization of a piece of text. Split on "white spaces" only, for sub-word tokenization, see
WordPieceTokenizer.
Args:
never_split (`List[str]`, *optional*)
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of token not to split.
"""
# union() returns a new set by concatenating the two sets.
never_split = self.never_split.union(set(never_split)) if never_split else self.never_split
text = self._clean_text(text)
# This was added on November 1st, 2018 for the multilingual and Chinese
# models. This is also applied to the English models now, but it doesn't
# matter since the English models were not trained on any Chinese data
# and generally don't have any Chinese data in them (there are Chinese
# characters in the vocabulary because Wikipedia does have some Chinese
# words in the English Wikipedia.).
if self.tokenize_chinese_chars:
text = self._tokenize_chinese_chars(text)
orig_tokens = whitespace_tokenize(text)
split_tokens = []
for token in orig_tokens:
if token not in never_split:
if self.do_lower_case:
token = token.lower()
if self.strip_accents is not False:
token = self._run_strip_accents(token)
elif self.strip_accents:
token = self._run_strip_accents(token)
split_tokens.extend(self._run_split_on_punc(token, never_split))
output_tokens = whitespace_tokenize(" ".join(split_tokens))
return output_tokens
def _run_strip_accents(self, text):
"""Strips accents from a piece of text."""
text = unicodedata.normalize("NFD", text)
output = []
for char in text:
cat = unicodedata.category(char)
if cat == "Mn":
continue
output.append(char)
return "".join(output)
def _run_split_on_punc(self, text, never_split=None):
"""Splits punctuation on a piece of text."""
if never_split is not None and text in never_split:
return [text]
chars = list(text)
i = 0
start_new_word = True
output = []
while i < len(chars):
char = chars[i]
if _is_punctuation(char):
output.append([char])
start_new_word = True
else:
if start_new_word:
output.append([])
start_new_word = False
output[-1].append(char)
i += 1
return ["".join(x) for x in output]
def _tokenize_chinese_chars(self, text):
"""Adds whitespace around any CJK character."""
output = []
for char in text:
cp = ord(char)
if self._is_chinese_char(cp):
output.append(" ")
output.append(char)
output.append(" ")
else:
output.append(char)
return "".join(output)
def _is_chinese_char(self, cp):
"""Checks whether CP is the codepoint of a CJK character."""
# This defines a "chinese character" as anything in the CJK Unicode block:
# https://en.wikipedia.org/wiki/CJK_Unified_Ideographs_(Unicode_block)
#
# Note that the CJK Unicode block is NOT all Japanese and Korean characters,
# despite its name. The modern Korean Hangul alphabet is a different block,
# as is Japanese Hiragana and Katakana. Those alphabets are used to write
# space-separated words, so they are not treated specially and handled
# like the all of the other languages.
if (
(cp >= 0x4E00 and cp <= 0x9FFF)
or (cp >= 0x3400 and cp <= 0x4DBF) #
or (cp >= 0x20000 and cp <= 0x2A6DF) #
or (cp >= 0x2A700 and cp <= 0x2B73F) #
or (cp >= 0x2B740 and cp <= 0x2B81F) #
or (cp >= 0x2B820 and cp <= 0x2CEAF) #
or (cp >= 0xF900 and cp <= 0xFAFF)
or (cp >= 0x2F800 and cp <= 0x2FA1F) #
): #
return True
return False
def _clean_text(self, text):
"""Performs invalid character removal and whitespace cleanup on text."""
output = []
for char in text:
cp = ord(char)
if cp == 0 or cp == 0xFFFD or _is_control(char):
continue
if _is_whitespace(char):
output.append(" ")
else:
output.append(char)
return "".join(output)
# Copied from transformers.models.bert.tokenization_bert.WordpieceTokenizer
class WordpieceTokenizer(object):
"""Runs WordPiece tokenization."""
def __init__(self, vocab, unk_token, max_input_chars_per_word=100):
self.vocab = vocab
self.unk_token = unk_token
self.max_input_chars_per_word = max_input_chars_per_word
def tokenize(self, text):
"""
Tokenizes a piece of text into its word pieces. This uses a greedy longest-match-first algorithm to perform
tokenization using the given vocabulary.
For example, `input = "unaffable"` wil return as output `["un", "##aff", "##able"]`.
Args:
text: A single token or whitespace separated tokens. This should have
already been passed through *BasicTokenizer*.
Returns:
A list of wordpiece tokens.
"""
output_tokens = []
for token in whitespace_tokenize(text):
chars = list(token)
if len(chars) > self.max_input_chars_per_word:
output_tokens.append(self.unk_token)
continue
is_bad = False
start = 0
sub_tokens = []
while start < len(chars):
end = len(chars)
cur_substr = None
while start < end:
substr = "".join(chars[start:end])
if start > 0:
substr = "##" + substr
if substr in self.vocab:
cur_substr = substr
break
end -= 1
if cur_substr is None:
is_bad = True
break
sub_tokens.append(cur_substr)
start = end
if is_bad:
output_tokens.append(self.unk_token)
else:
output_tokens.extend(sub_tokens)
return output_tokens
|
27182812/ChatGLM-LLaMA-chinese-insturct | 76,785 | src/transformers/models/mobilebert/modeling_tf_mobilebert.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 MobileBERT model."""
import warnings
from dataclasses import dataclass
from typing import Dict, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import (
TFBaseModelOutput,
TFBaseModelOutputWithPooling,
TFMaskedLMOutput,
TFMultipleChoiceModelOutput,
TFNextSentencePredictorOutput,
TFQuestionAnsweringModelOutput,
TFSequenceClassifierOutput,
TFTokenClassifierOutput,
)
from ...modeling_tf_utils import (
TFMaskedLanguageModelingLoss,
TFModelInputType,
TFMultipleChoiceLoss,
TFNextSentencePredictionLoss,
TFPreTrainedModel,
TFQuestionAnsweringLoss,
TFSequenceClassificationLoss,
TFTokenClassificationLoss,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import shape_list, stable_softmax
from ...utils import (
MULTIPLE_CHOICE_DUMMY_INPUTS,
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_mobilebert import MobileBertConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/mobilebert-uncased"
_CONFIG_FOR_DOC = "MobileBertConfig"
# TokenClassification docstring
_CHECKPOINT_FOR_TOKEN_CLASSIFICATION = "vumichien/mobilebert-finetuned-ner"
_TOKEN_CLASS_EXPECTED_OUTPUT = "['I-ORG', 'I-ORG', 'O', 'O', 'O', 'O', 'O', 'I-LOC', 'O', 'I-LOC', 'I-LOC']"
_TOKEN_CLASS_EXPECTED_LOSS = 0.03
# QuestionAnswering docstring
_CHECKPOINT_FOR_QA = "vumichien/mobilebert-uncased-squad-v2"
_QA_EXPECTED_OUTPUT = "'a nice puppet'"
_QA_EXPECTED_LOSS = 3.98
_QA_TARGET_START_INDEX = 12
_QA_TARGET_END_INDEX = 13
# SequenceClassification docstring
_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION = "vumichien/emo-mobilebert"
_SEQ_CLASS_EXPECTED_OUTPUT = "'others'"
_SEQ_CLASS_EXPECTED_LOSS = "4.72"
TF_MOBILEBERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"google/mobilebert-uncased",
# See all MobileBERT models at https://huggingface.co/models?filter=mobilebert
]
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPreTrainingLoss
class TFMobileBertPreTrainingLoss:
"""
Loss function suitable for BERT-like pretraining, that is, the task of pretraining a language model by combining
NSP + MLM. .. note:: Any label of -100 will be ignored (along with the corresponding logits) in the loss
computation.
"""
def hf_compute_loss(self, labels: tf.Tensor, logits: tf.Tensor) -> tf.Tensor:
loss_fn = tf.keras.losses.SparseCategoricalCrossentropy(
from_logits=True, reduction=tf.keras.losses.Reduction.NONE
)
# Clip negative labels to zero here to avoid NaNs and errors - those positions will get masked later anyway
unmasked_lm_losses = loss_fn(y_true=tf.nn.relu(labels["labels"]), y_pred=logits[0])
# make sure only labels that are not equal to -100
# are taken into account for the loss computation
lm_loss_mask = tf.cast(labels["labels"] != -100, dtype=unmasked_lm_losses.dtype)
masked_lm_losses = unmasked_lm_losses * lm_loss_mask
reduced_masked_lm_loss = tf.reduce_sum(masked_lm_losses) / tf.reduce_sum(lm_loss_mask)
# Clip negative labels to zero here to avoid NaNs and errors - those positions will get masked later anyway
unmasked_ns_loss = loss_fn(y_true=tf.nn.relu(labels["next_sentence_label"]), y_pred=logits[1])
ns_loss_mask = tf.cast(labels["next_sentence_label"] != -100, dtype=unmasked_ns_loss.dtype)
masked_ns_loss = unmasked_ns_loss * ns_loss_mask
reduced_masked_ns_loss = tf.reduce_sum(masked_ns_loss) / tf.reduce_sum(ns_loss_mask)
return tf.reshape(reduced_masked_lm_loss + reduced_masked_ns_loss, (1,))
class TFMobileBertIntermediate(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.intermediate_size, name="dense")
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
def call(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class TFLayerNorm(tf.keras.layers.LayerNormalization):
def __init__(self, feat_size, *args, **kwargs):
super().__init__(*args, **kwargs)
class TFNoNorm(tf.keras.layers.Layer):
def __init__(self, feat_size, epsilon=None, **kwargs):
super().__init__(**kwargs)
self.feat_size = feat_size
def build(self, input_shape):
self.bias = self.add_weight("bias", shape=[self.feat_size], initializer="zeros")
self.weight = self.add_weight("weight", shape=[self.feat_size], initializer="ones")
def call(self, inputs: tf.Tensor):
return inputs * self.weight + self.bias
NORM2FN = {"layer_norm": TFLayerNorm, "no_norm": TFNoNorm}
class TFMobileBertEmbeddings(tf.keras.layers.Layer):
"""Construct the embeddings from word, position and token_type embeddings."""
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.trigram_input = config.trigram_input
self.embedding_size = config.embedding_size
self.config = config
self.hidden_size = config.hidden_size
self.max_position_embeddings = config.max_position_embeddings
self.initializer_range = config.initializer_range
self.embedding_transformation = tf.keras.layers.Dense(config.hidden_size, name="embedding_transformation")
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = NORM2FN[config.normalization_type](
config.hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def build(self, input_shape):
with tf.name_scope("word_embeddings"):
self.weight = self.add_weight(
name="weight",
shape=[self.config.vocab_size, self.embedding_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
with tf.name_scope("token_type_embeddings"):
self.token_type_embeddings = self.add_weight(
name="embeddings",
shape=[self.config.type_vocab_size, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
with tf.name_scope("position_embeddings"):
self.position_embeddings = self.add_weight(
name="embeddings",
shape=[self.max_position_embeddings, self.hidden_size],
initializer=get_initializer(initializer_range=self.initializer_range),
)
super().build(input_shape)
def call(self, input_ids=None, position_ids=None, token_type_ids=None, inputs_embeds=None, training=False):
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
assert not (input_ids is None and inputs_embeds is None)
if input_ids is not None:
# Note: tf.gather, on which the embedding layer is based, won't check positive out of bound
# indices on GPU, returning zeros instead. This is a dangerous silent behavior.
tf.debugging.assert_less(
input_ids,
tf.cast(self.config.vocab_size, dtype=input_ids.dtype),
message=(
"input_ids must be smaller than the embedding layer's input dimension (got"
f" {tf.math.reduce_max(input_ids)} >= {self.config.vocab_size})"
),
)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
input_shape = shape_list(inputs_embeds)[:-1]
if token_type_ids is None:
token_type_ids = tf.fill(dims=input_shape, value=0)
if self.trigram_input:
# From the paper MobileBERT: a Compact Task-Agnostic BERT for Resource-Limited
# Devices (https://arxiv.org/abs/2004.02984)
#
# The embedding table in BERT models accounts for a substantial proportion of model size. To compress
# the embedding layer, we reduce the embedding dimension to 128 in MobileBERT.
# Then, we apply a 1D convolution with kernel size 3 on the raw token embedding to produce a 512
# dimensional output.
inputs_embeds = tf.concat(
[
tf.pad(inputs_embeds[:, 1:], ((0, 0), (0, 1), (0, 0))),
inputs_embeds,
tf.pad(inputs_embeds[:, :-1], ((0, 0), (1, 0), (0, 0))),
],
axis=2,
)
if self.trigram_input or self.embedding_size != self.hidden_size:
inputs_embeds = self.embedding_transformation(inputs_embeds)
if position_ids is None:
position_ids = tf.expand_dims(tf.range(start=0, limit=input_shape[-1]), axis=0)
position_embeds = tf.gather(params=self.position_embeddings, indices=position_ids)
token_type_embeds = tf.gather(params=self.token_type_embeddings, indices=token_type_ids)
final_embeddings = inputs_embeds + position_embeds + token_type_embeds
final_embeddings = self.LayerNorm(inputs=final_embeddings)
final_embeddings = self.dropout(inputs=final_embeddings, training=training)
return final_embeddings
class TFMobileBertSelfAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads}"
)
self.num_attention_heads = config.num_attention_heads
self.output_attentions = config.output_attentions
assert config.hidden_size % config.num_attention_heads == 0
self.attention_head_size = int(config.true_hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key"
)
self.value = tf.keras.layers.Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = tf.keras.layers.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x, batch_size):
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
x = tf.reshape(x, (batch_size, -1, self.num_attention_heads, self.attention_head_size))
return tf.transpose(x, perm=[0, 2, 1, 3])
def call(
self, query_tensor, key_tensor, value_tensor, attention_mask, head_mask, output_attentions, training=False
):
batch_size = shape_list(attention_mask)[0]
mixed_query_layer = self.query(query_tensor)
mixed_key_layer = self.key(key_tensor)
mixed_value_layer = self.value(value_tensor)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
key_layer = self.transpose_for_scores(mixed_key_layer, batch_size)
value_layer = self.transpose_for_scores(mixed_value_layer, batch_size)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = tf.matmul(
query_layer, key_layer, transpose_b=True
) # (batch size, num_heads, seq_len_q, seq_len_k)
dk = tf.cast(shape_list(key_layer)[-1], dtype=attention_scores.dtype) # scale attention_scores
attention_scores = attention_scores / tf.math.sqrt(dk)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in TFMobileBertModel call() function)
attention_mask = tf.cast(attention_mask, dtype=attention_scores.dtype)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = tf.matmul(attention_probs, value_layer)
context_layer = tf.transpose(context_layer, perm=[0, 2, 1, 3])
context_layer = tf.reshape(
context_layer, (batch_size, -1, self.all_head_size)
) # (batch_size, seq_len_q, all_head_size)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class TFMobileBertSelfOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.use_bottleneck = config.use_bottleneck
self.dense = tf.keras.layers.Dense(
config.true_hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = NORM2FN[config.normalization_type](
config.true_hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
if not self.use_bottleneck:
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, residual_tensor, training=False):
hidden_states = self.dense(hidden_states)
if not self.use_bottleneck:
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = self.LayerNorm(hidden_states + residual_tensor)
return hidden_states
class TFMobileBertAttention(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.self = TFMobileBertSelfAttention(config, name="self")
self.mobilebert_output = TFMobileBertSelfOutput(config, name="output")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_mask,
head_mask,
output_attentions,
training=False,
):
self_outputs = self.self(
query_tensor, key_tensor, value_tensor, attention_mask, head_mask, output_attentions, training=training
)
attention_output = self.mobilebert_output(self_outputs[0], layer_input, training=training)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class TFOutputBottleneck(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.hidden_size, name="dense")
self.LayerNorm = NORM2FN[config.normalization_type](
config.hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, residual_tensor, training=False):
layer_outputs = self.dense(hidden_states)
layer_outputs = self.dropout(layer_outputs, training=training)
layer_outputs = self.LayerNorm(layer_outputs + residual_tensor)
return layer_outputs
class TFMobileBertOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.use_bottleneck = config.use_bottleneck
self.dense = tf.keras.layers.Dense(
config.true_hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = NORM2FN[config.normalization_type](
config.true_hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
if not self.use_bottleneck:
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
else:
self.bottleneck = TFOutputBottleneck(config, name="bottleneck")
def call(self, hidden_states, residual_tensor_1, residual_tensor_2, training=False):
hidden_states = self.dense(hidden_states)
if not self.use_bottleneck:
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = self.LayerNorm(hidden_states + residual_tensor_1)
else:
hidden_states = self.LayerNorm(hidden_states + residual_tensor_1)
hidden_states = self.bottleneck(hidden_states, residual_tensor_2)
return hidden_states
class TFBottleneckLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.intra_bottleneck_size, name="dense")
self.LayerNorm = NORM2FN[config.normalization_type](
config.intra_bottleneck_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
def call(self, inputs):
hidden_states = self.dense(inputs)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
class TFBottleneck(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.key_query_shared_bottleneck = config.key_query_shared_bottleneck
self.use_bottleneck_attention = config.use_bottleneck_attention
self.bottleneck_input = TFBottleneckLayer(config, name="input")
if self.key_query_shared_bottleneck:
self.attention = TFBottleneckLayer(config, name="attention")
def call(self, hidden_states):
# This method can return three different tuples of values. These different values make use of bottlenecks,
# which are linear layers used to project the hidden states to a lower-dimensional vector, reducing memory
# usage. These linear layer have weights that are learned during training.
#
# If `config.use_bottleneck_attention`, it will return the result of the bottleneck layer four times for the
# key, query, value, and "layer input" to be used by the attention layer.
# This bottleneck is used to project the hidden. This last layer input will be used as a residual tensor
# in the attention self output, after the attention scores have been computed.
#
# If not `config.use_bottleneck_attention` and `config.key_query_shared_bottleneck`, this will return
# four values, three of which have been passed through a bottleneck: the query and key, passed through the same
# bottleneck, and the residual layer to be applied in the attention self output, through another bottleneck.
#
# Finally, in the last case, the values for the query, key and values are the hidden states without bottleneck,
# and the residual layer will be this value passed through a bottleneck.
bottlenecked_hidden_states = self.bottleneck_input(hidden_states)
if self.use_bottleneck_attention:
return (bottlenecked_hidden_states,) * 4
elif self.key_query_shared_bottleneck:
shared_attention_input = self.attention(hidden_states)
return (shared_attention_input, shared_attention_input, hidden_states, bottlenecked_hidden_states)
else:
return (hidden_states, hidden_states, hidden_states, bottlenecked_hidden_states)
class TFFFNOutput(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(config.true_hidden_size, name="dense")
self.LayerNorm = NORM2FN[config.normalization_type](
config.true_hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm"
)
def call(self, hidden_states, residual_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.LayerNorm(hidden_states + residual_tensor)
return hidden_states
class TFFFNLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.intermediate = TFMobileBertIntermediate(config, name="intermediate")
self.mobilebert_output = TFFFNOutput(config, name="output")
def call(self, hidden_states):
intermediate_output = self.intermediate(hidden_states)
layer_outputs = self.mobilebert_output(intermediate_output, hidden_states)
return layer_outputs
class TFMobileBertLayer(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.use_bottleneck = config.use_bottleneck
self.num_feedforward_networks = config.num_feedforward_networks
self.attention = TFMobileBertAttention(config, name="attention")
self.intermediate = TFMobileBertIntermediate(config, name="intermediate")
self.mobilebert_output = TFMobileBertOutput(config, name="output")
if self.use_bottleneck:
self.bottleneck = TFBottleneck(config, name="bottleneck")
if config.num_feedforward_networks > 1:
self.ffn = [TFFFNLayer(config, name=f"ffn.{i}") for i in range(config.num_feedforward_networks - 1)]
def call(self, hidden_states, attention_mask, head_mask, output_attentions, training=False):
if self.use_bottleneck:
query_tensor, key_tensor, value_tensor, layer_input = self.bottleneck(hidden_states)
else:
query_tensor, key_tensor, value_tensor, layer_input = [hidden_states] * 4
attention_outputs = self.attention(
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_mask,
head_mask,
output_attentions,
training=training,
)
attention_output = attention_outputs[0]
s = (attention_output,)
if self.num_feedforward_networks != 1:
for i, ffn_module in enumerate(self.ffn):
attention_output = ffn_module(attention_output)
s += (attention_output,)
intermediate_output = self.intermediate(attention_output)
layer_output = self.mobilebert_output(intermediate_output, attention_output, hidden_states, training=training)
outputs = (
(layer_output,)
+ attention_outputs[1:]
+ (
tf.constant(0),
query_tensor,
key_tensor,
value_tensor,
layer_input,
attention_output,
intermediate_output,
)
+ s
) # add attentions if we output them
return outputs
class TFMobileBertEncoder(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.output_attentions = config.output_attentions
self.output_hidden_states = config.output_hidden_states
self.layer = [TFMobileBertLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states,
attention_mask,
head_mask,
output_attentions,
output_hidden_states,
return_dict,
training=False,
):
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_outputs = layer_module(
hidden_states, attention_mask, head_mask[i], output_attentions, training=training
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
class TFMobileBertPooler(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.do_activate = config.classifier_activation
if self.do_activate:
self.dense = tf.keras.layers.Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states):
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
if not self.do_activate:
return first_token_tensor
else:
pooled_output = self.dense(first_token_tensor)
return pooled_output
class TFMobileBertPredictionHeadTransform(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.transform_act_fn = get_tf_activation(config.hidden_act)
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = NORM2FN["layer_norm"](config.hidden_size, epsilon=config.layer_norm_eps, name="LayerNorm")
def call(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
class TFMobileBertLMPredictionHead(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.transform = TFMobileBertPredictionHeadTransform(config, name="transform")
self.config = config
def build(self, input_shape):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
self.dense = self.add_weight(
shape=(self.config.hidden_size - self.config.embedding_size, self.config.vocab_size),
initializer="zeros",
trainable=True,
name="dense/weight",
)
self.decoder = self.add_weight(
shape=(self.config.vocab_size, self.config.embedding_size),
initializer="zeros",
trainable=True,
name="decoder/weight",
)
super().build(input_shape)
def get_output_embeddings(self):
return self
def set_output_embeddings(self, value):
self.decoder = value
self.config.vocab_size = shape_list(value)[0]
def get_bias(self):
return {"bias": self.bias}
def set_bias(self, value):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = tf.matmul(hidden_states, tf.concat([tf.transpose(self.decoder), self.dense], axis=0))
hidden_states = hidden_states + self.bias
return hidden_states
class TFMobileBertMLMHead(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.predictions = TFMobileBertLMPredictionHead(config, name="predictions")
def call(self, sequence_output):
prediction_scores = self.predictions(sequence_output)
return prediction_scores
@keras_serializable
class TFMobileBertMainLayer(tf.keras.layers.Layer):
config_class = MobileBertConfig
def __init__(self, config, add_pooling_layer=True, **kwargs):
super().__init__(**kwargs)
self.config = config
self.num_hidden_layers = config.num_hidden_layers
self.output_attentions = config.output_attentions
self.output_hidden_states = config.output_hidden_states
self.return_dict = config.use_return_dict
self.embeddings = TFMobileBertEmbeddings(config, name="embeddings")
self.encoder = TFMobileBertEncoder(config, name="encoder")
self.pooler = TFMobileBertPooler(config, name="pooler") if add_pooling_layer else None
def get_input_embeddings(self):
return self.embeddings
def set_input_embeddings(self, value):
self.embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids=None,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
inputs_embeds=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
training=False,
):
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if attention_mask is None:
attention_mask = tf.fill(input_shape, 1)
if token_type_ids is None:
token_type_ids = tf.fill(input_shape, 0)
embedding_output = self.embeddings(input_ids, position_ids, token_type_ids, inputs_embeds, training=training)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
extended_attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.num_hidden_layers
encoder_outputs = self.encoder(
embedding_output,
extended_attention_mask,
head_mask,
output_attentions,
output_hidden_states,
return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class TFMobileBertPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = MobileBertConfig
base_model_prefix = "mobilebert"
@dataclass
class TFMobileBertForPreTrainingOutput(ModelOutput):
"""
Output type of [`TFMobileBertForPreTraining`].
Args:
prediction_logits (`tf.Tensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`tf.Tensor` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[tf.Tensor] = None
prediction_logits: tf.Tensor = None
seq_relationship_logits: tf.Tensor = None
hidden_states: Optional[Tuple[tf.Tensor]] = None
attentions: Optional[Tuple[tf.Tensor]] = None
MOBILEBERT_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`MobileBertConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
MOBILEBERT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`Numpy array` or `tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`Numpy array` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`Numpy array` or `tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare MobileBert Model transformer outputting raw hidden-states without any specific head on top.",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertModel(TFMobileBertPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutputWithPooling]:
outputs = self.mobilebert(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def serving_output(self, output: TFBaseModelOutputWithPooling) -> TFBaseModelOutputWithPooling:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFBaseModelOutputWithPooling(
last_hidden_state=output.last_hidden_state,
pooler_output=output.pooler_output,
hidden_states=hs,
attentions=attns,
)
@add_start_docstrings(
"""
MobileBert Model with two heads on top as done during the pretraining: a `masked language modeling` head and a
`next sentence prediction (classification)` head.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForPreTraining(TFMobileBertPreTrainedModel, TFMobileBertPreTrainingLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
self.predictions = TFMobileBertMLMHead(config, name="predictions___cls")
self.seq_relationship = TFMobileBertOnlyNSPHead(2, name="seq_relationship___cls")
def get_lm_head(self):
return self.predictions.predictions
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.predictions.name + "/" + self.predictions.predictions.name
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFMobileBertForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
next_sentence_label: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFMobileBertForPreTrainingOutput]:
r"""
Return:
Examples:
```python
>>> import tensorflow as tf
>>> from transformers import AutoTokenizer, TFMobileBertForPreTraining
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = TFMobileBertForPreTraining.from_pretrained("google/mobilebert-uncased")
>>> input_ids = tf.constant(tokenizer.encode("Hello, my dog is cute"))[None, :] # Batch size 1
>>> outputs = model(input_ids)
>>> prediction_scores, seq_relationship_scores = outputs[:2]
```"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output, pooled_output = outputs[:2]
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
total_loss = None
if labels is not None and next_sentence_label is not None:
d_labels = {"labels": labels}
d_labels["next_sentence_label"] = next_sentence_label
total_loss = self.hf_compute_loss(labels=d_labels, logits=(prediction_scores, seq_relationship_score))
if not return_dict:
output = (prediction_scores, seq_relationship_score) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return TFMobileBertForPreTrainingOutput(
loss=total_loss,
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def serving_output(self, output):
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFMobileBertForPreTrainingOutput(
prediction_logits=output.prediction_logits,
seq_relationship_logits=output.seq_relationship_logits,
hidden_states=hs,
attentions=attns,
)
@add_start_docstrings("""MobileBert Model with a `language modeling` head on top.""", MOBILEBERT_START_DOCSTRING)
class TFMobileBertForMaskedLM(TFMobileBertPreTrainedModel, TFMaskedLanguageModelingLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"pooler",
r"seq_relationship___cls",
r"cls.seq_relationship",
]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, add_pooling_layer=False, name="mobilebert")
self.predictions = TFMobileBertMLMHead(config, name="predictions___cls")
def get_lm_head(self):
return self.predictions.predictions
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.mlm.name + "/" + self.mlm.predictions.name
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
expected_output="'paris'",
expected_loss=0.57,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFMaskedLMOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.predictions(sequence_output, training=training)
loss = None if labels is None else self.hf_compute_loss(labels, prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMaskedLMOutput(
loss=loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForMaskedLM.serving_output
def serving_output(self, output: TFMaskedLMOutput) -> TFMaskedLMOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFMaskedLMOutput(logits=output.logits, hidden_states=hs, attentions=attns)
class TFMobileBertOnlyNSPHead(tf.keras.layers.Layer):
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.seq_relationship = tf.keras.layers.Dense(2, name="seq_relationship")
def call(self, pooled_output):
seq_relationship_score = self.seq_relationship(pooled_output)
return seq_relationship_score
@add_start_docstrings(
"""MobileBert Model with a `next sentence prediction (classification)` head on top.""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForNextSentencePrediction(TFMobileBertPreTrainedModel, TFNextSentencePredictionLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [r"predictions___cls", r"cls.predictions"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
self.cls = TFMobileBertOnlyNSPHead(config, name="seq_relationship___cls")
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFNextSentencePredictorOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
next_sentence_label: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFNextSentencePredictorOutput]:
r"""
Return:
Examples:
```python
>>> import tensorflow as tf
>>> from transformers import AutoTokenizer, TFMobileBertForNextSentencePrediction
>>> tokenizer = AutoTokenizer.from_pretrained("google/mobilebert-uncased")
>>> model = TFMobileBertForNextSentencePrediction.from_pretrained("google/mobilebert-uncased")
>>> prompt = "In Italy, pizza served in formal settings, such as at a restaurant, is presented unsliced."
>>> next_sentence = "The sky is blue due to the shorter wavelength of blue light."
>>> encoding = tokenizer(prompt, next_sentence, return_tensors="tf")
>>> logits = model(encoding["input_ids"], token_type_ids=encoding["token_type_ids"])[0]
```"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
seq_relationship_scores = self.cls(pooled_output)
next_sentence_loss = (
None
if next_sentence_label is None
else self.hf_compute_loss(labels=next_sentence_label, logits=seq_relationship_scores)
)
if not return_dict:
output = (seq_relationship_scores,) + outputs[2:]
return ((next_sentence_loss,) + output) if next_sentence_loss is not None else output
return TFNextSentencePredictorOutput(
loss=next_sentence_loss,
logits=seq_relationship_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForNextSentencePrediction.serving_output
def serving_output(self, output: TFNextSentencePredictorOutput) -> TFNextSentencePredictorOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFNextSentencePredictorOutput(logits=output.logits, hidden_states=hs, attentions=attns)
@add_start_docstrings(
"""
MobileBert Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForSequenceClassification(TFMobileBertPreTrainedModel, TFSequenceClassificationLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
_keys_to_ignore_on_load_missing = [r"dropout"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = tf.keras.layers.Dropout(classifier_dropout)
self.classifier = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_SEQ_CLASS_EXPECTED_OUTPUT,
expected_loss=_SEQ_CLASS_EXPECTED_LOSS,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFSequenceClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output, training=training)
logits = self.classifier(pooled_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForSequenceClassification.serving_output
def serving_output(self, output: TFSequenceClassifierOutput) -> TFSequenceClassifierOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFSequenceClassifierOutput(logits=output.logits, hidden_states=hs, attentions=attns)
@add_start_docstrings(
"""
MobileBert Model with a span classification head on top for extractive question-answering tasks like SQuAD (a
linear layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForQuestionAnswering(TFMobileBertPreTrainedModel, TFQuestionAnsweringLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"pooler",
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mobilebert = TFMobileBertMainLayer(config, add_pooling_layer=False, name="mobilebert")
self.qa_outputs = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="qa_outputs"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_QA,
output_type=TFQuestionAnsweringModelOutput,
config_class=_CONFIG_FOR_DOC,
qa_target_start_index=_QA_TARGET_START_INDEX,
qa_target_end_index=_QA_TARGET_END_INDEX,
expected_output=_QA_EXPECTED_OUTPUT,
expected_loss=_QA_EXPECTED_LOSS,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
start_positions: Optional[Union[np.ndarray, tf.Tensor]] = None,
end_positions: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFQuestionAnsweringModelOutput]:
r"""
start_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.qa_outputs(sequence_output)
start_logits, end_logits = tf.split(logits, 2, axis=-1)
start_logits = tf.squeeze(start_logits, axis=-1)
end_logits = tf.squeeze(end_logits, axis=-1)
loss = None
if start_positions is not None and end_positions is not None:
labels = {"start_position": start_positions, "end_position": end_positions}
loss = self.hf_compute_loss(labels, (start_logits, end_logits))
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFQuestionAnsweringModelOutput(
loss=loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForQuestionAnswering.serving_output
def serving_output(self, output: TFQuestionAnsweringModelOutput) -> TFQuestionAnsweringModelOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFQuestionAnsweringModelOutput(
start_logits=output.start_logits, end_logits=output.end_logits, hidden_states=hs, attentions=attns
)
@add_start_docstrings(
"""
MobileBert Model with a multiple choice classification head on top (a linear layer on top of the pooled output and
a softmax) e.g. for RocStories/SWAG tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForMultipleChoice(TFMobileBertPreTrainedModel, TFMultipleChoiceLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
_keys_to_ignore_on_load_missing = [r"dropout"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.mobilebert = TFMobileBertMainLayer(config, name="mobilebert")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
self.classifier = tf.keras.layers.Dense(
1, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@property
def dummy_inputs(self):
"""
Dummy inputs to build the network.
Returns:
tf.Tensor with dummy inputs
"""
return {"input_ids": tf.constant(MULTIPLE_CHOICE_DUMMY_INPUTS, dtype=tf.int32)}
@unpack_inputs
@add_start_docstrings_to_model_forward(
MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFMultipleChoiceModelOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ..., num_choices]`
where `num_choices` is the size of the second dimension of the input tensors. (See `input_ids` above)
"""
if input_ids is not None:
num_choices = shape_list(input_ids)[1]
seq_length = shape_list(input_ids)[2]
else:
num_choices = shape_list(inputs_embeds)[1]
seq_length = shape_list(inputs_embeds)[2]
flat_input_ids = tf.reshape(input_ids, (-1, seq_length)) if input_ids is not None else None
flat_attention_mask = tf.reshape(attention_mask, (-1, seq_length)) if attention_mask is not None else None
flat_token_type_ids = tf.reshape(token_type_ids, (-1, seq_length)) if token_type_ids is not None else None
flat_position_ids = tf.reshape(position_ids, (-1, seq_length)) if position_ids is not None else None
flat_inputs_embeds = (
tf.reshape(inputs_embeds, (-1, seq_length, shape_list(inputs_embeds)[3]))
if inputs_embeds is not None
else None
)
outputs = self.mobilebert(
flat_input_ids,
flat_attention_mask,
flat_token_type_ids,
flat_position_ids,
head_mask,
flat_inputs_embeds,
output_attentions,
output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output, training=training)
logits = self.classifier(pooled_output)
reshaped_logits = tf.reshape(logits, (-1, num_choices))
loss = None if labels is None else self.hf_compute_loss(labels, reshaped_logits)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@tf.function(
input_signature=[
{
"input_ids": tf.TensorSpec((None, None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None, None), tf.int32, name="attention_mask"),
"token_type_ids": tf.TensorSpec((None, None, None), tf.int32, name="token_type_ids"),
}
]
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForMultipleChoice.serving
def serving(self, inputs: Dict[str, tf.Tensor]):
output = self.call(input_ids=inputs)
return self.serving_output(output)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForMultipleChoice.serving_output
def serving_output(self, output: TFMultipleChoiceModelOutput) -> TFMultipleChoiceModelOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFMultipleChoiceModelOutput(logits=output.logits, hidden_states=hs, attentions=attns)
@add_start_docstrings(
"""
MobileBert Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g.
for Named-Entity-Recognition (NER) tasks.
""",
MOBILEBERT_START_DOCSTRING,
)
class TFMobileBertForTokenClassification(TFMobileBertPreTrainedModel, TFTokenClassificationLoss):
# names with a '.' represents the authorized unexpected/missing layers when a TF model is loaded from a PT model
_keys_to_ignore_on_load_unexpected = [
r"pooler",
r"predictions___cls",
r"seq_relationship___cls",
r"cls.predictions",
r"cls.seq_relationship",
]
_keys_to_ignore_on_load_missing = [r"dropout"]
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.mobilebert = TFMobileBertMainLayer(config, add_pooling_layer=False, name="mobilebert")
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = tf.keras.layers.Dropout(classifier_dropout)
self.classifier = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(MOBILEBERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_TOKEN_CLASSIFICATION,
output_type=TFTokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_TOKEN_CLASS_EXPECTED_OUTPUT,
expected_loss=_TOKEN_CLASS_EXPECTED_LOSS,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFTokenClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
outputs = self.mobilebert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output, training=training)
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFTokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForTokenClassification.serving_output
def serving_output(self, output: TFTokenClassifierOutput) -> TFTokenClassifierOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFTokenClassifierOutput(logits=output.logits, hidden_states=hs, attentions=attns)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 8,377 | src/transformers/models/mobilebert/tokenization_mobilebert_fast.py | # coding=utf-8
#
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for MobileBERT."""
import json
from typing import List, Optional, Tuple
from tokenizers import normalizers
from ...tokenization_utils_fast import PreTrainedTokenizerFast
from ...utils import logging
from .tokenization_mobilebert import MobileBertTokenizer
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt", "tokenizer_file": "tokenizer.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {"mobilebert-uncased": "https://huggingface.co/google/mobilebert-uncased/resolve/main/vocab.txt"},
"tokenizer_file": {
"mobilebert-uncased": "https://huggingface.co/google/mobilebert-uncased/resolve/main/tokenizer.json"
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"mobilebert-uncased": 512}
PRETRAINED_INIT_CONFIGURATION = {}
# Copied from transformers.models.bert.tokenization_bert_fast.BertTokenizerFast with BERT->MobileBERT,Bert->MobileBert
class MobileBertTokenizerFast(PreTrainedTokenizerFast):
r"""
Construct a "fast" MobileBERT tokenizer (backed by HuggingFace's *tokenizers* library). Based on WordPiece.
This tokenizer inherits from [`PreTrainedTokenizerFast`] which contains most of the main methods. Users should
refer to this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
File containing the vocabulary.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
unk_token (`str`, *optional*, defaults to `"[UNK]"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"[PAD]"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
clean_text (`bool`, *optional*, defaults to `True`):
Whether or not to clean the text before tokenization by removing any control characters and replacing all
whitespaces by the classic one.
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters. This should likely be deactivated for Japanese (see [this
issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original MobileBERT).
wordpieces_prefix (`str`, *optional*, defaults to `"##"`):
The prefix for subwords.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
slow_tokenizer_class = MobileBertTokenizer
def __init__(
self,
vocab_file=None,
tokenizer_file=None,
do_lower_case=True,
unk_token="[UNK]",
sep_token="[SEP]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
tokenize_chinese_chars=True,
strip_accents=None,
**kwargs,
):
super().__init__(
vocab_file,
tokenizer_file=tokenizer_file,
do_lower_case=do_lower_case,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
**kwargs,
)
normalizer_state = json.loads(self.backend_tokenizer.normalizer.__getstate__())
if (
normalizer_state.get("lowercase", do_lower_case) != do_lower_case
or normalizer_state.get("strip_accents", strip_accents) != strip_accents
or normalizer_state.get("handle_chinese_chars", tokenize_chinese_chars) != tokenize_chinese_chars
):
normalizer_class = getattr(normalizers, normalizer_state.pop("type"))
normalizer_state["lowercase"] = do_lower_case
normalizer_state["strip_accents"] = strip_accents
normalizer_state["handle_chinese_chars"] = tokenize_chinese_chars
self.backend_tokenizer.normalizer = normalizer_class(**normalizer_state)
self.do_lower_case = do_lower_case
def build_inputs_with_special_tokens(self, token_ids_0, token_ids_1=None):
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A MobileBERT sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
output = [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
if token_ids_1:
output += token_ids_1 + [self.sep_token_id]
return output
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A MobileBERT
sequence pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
files = self._tokenizer.model.save(save_directory, name=filename_prefix)
return tuple(files)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 8,586 | src/transformers/models/mobilebert/configuration_mobilebert.py | # coding=utf-8
# Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" MobileBERT model configuration"""
from collections import OrderedDict
from typing import Mapping
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
logger = logging.get_logger(__name__)
MOBILEBERT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"google/mobilebert-uncased": "https://huggingface.co/google/mobilebert-uncased/resolve/main/config.json"
}
class MobileBertConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`MobileBertModel`] or a [`TFMobileBertModel`]. It
is used to instantiate a MobileBERT model according to the specified arguments, defining the model architecture.
Instantiating a configuration with the defaults will yield a similar configuration to that of the MobileBERT
[google/mobilebert-uncased](https://huggingface.co/google/mobilebert-uncased) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the MobileBERT model. Defines the number of different tokens that can be represented by
the `inputs_ids` passed when calling [`MobileBertModel`] or [`TFMobileBertModel`].
hidden_size (`int`, *optional*, defaults to 512):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 24):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 4):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 512):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"relu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed when calling [`MobileBertModel`] or
[`TFMobileBertModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
pad_token_id (`int`, *optional*, defaults to 0):
The ID of the token in the word embedding to use as padding.
embedding_size (`int`, *optional*, defaults to 128):
The dimension of the word embedding vectors.
trigram_input (`bool`, *optional*, defaults to `True`):
Use a convolution of trigram as input.
use_bottleneck (`bool`, *optional*, defaults to `True`):
Whether to use bottleneck in BERT.
intra_bottleneck_size (`int`, *optional*, defaults to 128):
Size of bottleneck layer output.
use_bottleneck_attention (`bool`, *optional*, defaults to `False`):
Whether to use attention inputs from the bottleneck transformation.
key_query_shared_bottleneck (`bool`, *optional*, defaults to `True`):
Whether to use the same linear transformation for query&key in the bottleneck.
num_feedforward_networks (`int`, *optional*, defaults to 4):
Number of FFNs in a block.
normalization_type (`str`, *optional*, defaults to `"no_norm"`):
The normalization type in MobileBERT.
classifier_dropout (`float`, *optional*):
The dropout ratio for the classification head.
Examples:
```python
>>> from transformers import MobileBertConfig, MobileBertModel
>>> # Initializing a MobileBERT configuration
>>> configuration = MobileBertConfig()
>>> # Initializing a model (with random weights) from the configuration above
>>> model = MobileBertModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```
Attributes: pretrained_config_archive_map (Dict[str, str]): A dictionary containing all the available pre-trained
checkpoints.
"""
pretrained_config_archive_map = MOBILEBERT_PRETRAINED_CONFIG_ARCHIVE_MAP
model_type = "mobilebert"
def __init__(
self,
vocab_size=30522,
hidden_size=512,
num_hidden_layers=24,
num_attention_heads=4,
intermediate_size=512,
hidden_act="relu",
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.1,
max_position_embeddings=512,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
pad_token_id=0,
embedding_size=128,
trigram_input=True,
use_bottleneck=True,
intra_bottleneck_size=128,
use_bottleneck_attention=False,
key_query_shared_bottleneck=True,
num_feedforward_networks=4,
normalization_type="no_norm",
classifier_activation=True,
classifier_dropout=None,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.type_vocab_size = type_vocab_size
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.embedding_size = embedding_size
self.trigram_input = trigram_input
self.use_bottleneck = use_bottleneck
self.intra_bottleneck_size = intra_bottleneck_size
self.use_bottleneck_attention = use_bottleneck_attention
self.key_query_shared_bottleneck = key_query_shared_bottleneck
self.num_feedforward_networks = num_feedforward_networks
self.normalization_type = normalization_type
self.classifier_activation = classifier_activation
if self.use_bottleneck:
self.true_hidden_size = intra_bottleneck_size
else:
self.true_hidden_size = hidden_size
self.classifier_dropout = classifier_dropout
# Copied from transformers.models.bert.configuration_bert.BertOnnxConfig with Bert->MobileBert
class MobileBertOnnxConfig(OnnxConfig):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
if self.task == "multiple-choice":
dynamic_axis = {0: "batch", 1: "choice", 2: "sequence"}
else:
dynamic_axis = {0: "batch", 1: "sequence"}
return OrderedDict(
[
("input_ids", dynamic_axis),
("attention_mask", dynamic_axis),
("token_type_ids", dynamic_axis),
]
)
|
233zzh/TitanDataOperationSystem | 3,036 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/retention/function/commonFunc/DayRetentionFunction.scala | package cn.edu.neu.titan.titanSpark.migration.retention.function.commonFunc
import java.sql.{Connection, DriverManager}
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.common.utils.ColumnNameUtils
import cn.edu.neu.titan.titanSpark.migration._
/**
* Created by IntelliJ IDEA.
*
* @Author: Zhao Lei
* @Email: 1176066749@qq.com
* @Date: 2020/7/14
* @Time: 21:18
* @Version: 1.0
* @Description: 每天更新活跃/新增用户留存的 mysql 表，更新规则是：
* 1. 先把前一天的默认数据(留存天数都为0)插入mysql横表
* 2.查询hive纵表，找出留存天数发生变化的数据
* 3.将发生变化的数据更新到mysql横表
*/
object DayRetentionFunction {
def migrate(tbSource: String, tbTarget: String, dayColumn: String, countColumn: String): Unit = {
Class.forName(driver)
val connection: Connection = DriverManager.getConnection(url, connectionProperties)
//插入前一天的数据，默认值全部都是 0
val sql_insert_today = InitialInsertSql.getRetentionInitial(currentDate)
//选出活跃用户留存天数发生变化的数据，即：currentDate - dt = nrt_days 的数据
val sql_select_changed = s"SELECT dt, cId channel_id, vId version_id, $dayColumn, $countColumn " +
s"FROM $tbSource rt_rec JOIN $tbCVJoin cv ON rt_rec.version = cv.vname and rt_rec.channel = cv.cname " +
s"WHERE $dayColumn > 0 AND $dayColumn <= 7 OR $dayColumn = 14 OR $dayColumn = 30 AND datediff('$currentDate', dt) = $dayColumn"
println("--------------------------------------insert today---------------------------------------")
println(sql_insert_today)
spark.sql(sql_insert_today).orderBy("vid").show(10000)
println(sql_select_changed)
//1. 先把前一天的默认数据(留存天数都为0)插入mysql横表
spark.sql(sql_insert_today).toDF("retention_date", "channel_id", "version_id", "1_day_after_num", "2_day_after_num", "3_day_after_num", "4_day_after_num", "5_day_after_num",
"6_day_after_num", "7_day_after_num", "14_day_after_num", "30_day_after_num")
.write.
mode("append").
jdbc(url, tbTarget, connectionProperties)
//2.查询hive纵表，找出留存天数发生变化的数据
val df = spark.sql(sql_select_changed)
println("---------------------------------changed--------------------------------")
df.show(300)
//3.将发生变化的数据更新到mysql横表
df.rdd.collect.foreach(row => {
val dt = row.getAs[String]("dt")
val channel_id = row.getAs[Int]("channel_id")
val version_id = row.getAs[Int]("version_id")
val rt_days = row.getAs[Int](dayColumn)
val rt_count = row.getAs[Int](countColumn)
val sql_update = s"UPDATE $tbTarget " +
s"SET ${ColumnNameUtils.getRetentionDayColumn(rt_days)} = $rt_count " +
s"WHERE retention_date = '$dt' AND " +
s"version_id = $version_id " +
s"AND " +
s"channel_id = $channel_id"
connection.createStatement().execute(sql_update)
})
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 10,171 | src/transformers/models/mluke/convert_mluke_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert mLUKE checkpoint."""
import argparse
import json
import os
from collections import OrderedDict
import torch
from transformers import LukeConfig, LukeForMaskedLM, MLukeTokenizer, XLMRobertaTokenizer
from transformers.tokenization_utils_base import AddedToken
@torch.no_grad()
def convert_luke_checkpoint(checkpoint_path, metadata_path, entity_vocab_path, pytorch_dump_folder_path, model_size):
# Load configuration defined in the metadata file
with open(metadata_path) as metadata_file:
metadata = json.load(metadata_file)
config = LukeConfig(use_entity_aware_attention=True, **metadata["model_config"])
# Load in the weights from the checkpoint_path
state_dict = torch.load(checkpoint_path, map_location="cpu")["module"]
# Load the entity vocab file
entity_vocab = load_original_entity_vocab(entity_vocab_path)
# add an entry for [MASK2]
entity_vocab["[MASK2]"] = max(entity_vocab.values()) + 1
config.entity_vocab_size += 1
tokenizer = XLMRobertaTokenizer.from_pretrained(metadata["model_config"]["bert_model_name"])
# Add special tokens to the token vocabulary for downstream tasks
entity_token_1 = AddedToken("<ent>", lstrip=False, rstrip=False)
entity_token_2 = AddedToken("<ent2>", lstrip=False, rstrip=False)
tokenizer.add_special_tokens({"additional_special_tokens": [entity_token_1, entity_token_2]})
config.vocab_size += 2
print(f"Saving tokenizer to {pytorch_dump_folder_path}")
tokenizer.save_pretrained(pytorch_dump_folder_path)
with open(os.path.join(pytorch_dump_folder_path, "tokenizer_config.json"), "r") as f:
tokenizer_config = json.load(f)
tokenizer_config["tokenizer_class"] = "MLukeTokenizer"
with open(os.path.join(pytorch_dump_folder_path, "tokenizer_config.json"), "w") as f:
json.dump(tokenizer_config, f)
with open(os.path.join(pytorch_dump_folder_path, MLukeTokenizer.vocab_files_names["entity_vocab_file"]), "w") as f:
json.dump(entity_vocab, f)
tokenizer = MLukeTokenizer.from_pretrained(pytorch_dump_folder_path)
# Initialize the embeddings of the special tokens
ent_init_index = tokenizer.convert_tokens_to_ids(["@"])[0]
ent2_init_index = tokenizer.convert_tokens_to_ids(["#"])[0]
word_emb = state_dict["embeddings.word_embeddings.weight"]
ent_emb = word_emb[ent_init_index].unsqueeze(0)
ent2_emb = word_emb[ent2_init_index].unsqueeze(0)
state_dict["embeddings.word_embeddings.weight"] = torch.cat([word_emb, ent_emb, ent2_emb])
# add special tokens for 'entity_predictions.bias'
for bias_name in ["lm_head.decoder.bias", "lm_head.bias"]:
decoder_bias = state_dict[bias_name]
ent_decoder_bias = decoder_bias[ent_init_index].unsqueeze(0)
ent2_decoder_bias = decoder_bias[ent2_init_index].unsqueeze(0)
state_dict[bias_name] = torch.cat([decoder_bias, ent_decoder_bias, ent2_decoder_bias])
# Initialize the query layers of the entity-aware self-attention mechanism
for layer_index in range(config.num_hidden_layers):
for matrix_name in ["query.weight", "query.bias"]:
prefix = f"encoder.layer.{layer_index}.attention.self."
state_dict[prefix + "w2e_" + matrix_name] = state_dict[prefix + matrix_name]
state_dict[prefix + "e2w_" + matrix_name] = state_dict[prefix + matrix_name]
state_dict[prefix + "e2e_" + matrix_name] = state_dict[prefix + matrix_name]
# Initialize the embedding of the [MASK2] entity using that of the [MASK] entity for downstream tasks
entity_emb = state_dict["entity_embeddings.entity_embeddings.weight"]
entity_mask_emb = entity_emb[entity_vocab["[MASK]"]].unsqueeze(0)
state_dict["entity_embeddings.entity_embeddings.weight"] = torch.cat([entity_emb, entity_mask_emb])
# add [MASK2] for 'entity_predictions.bias'
entity_prediction_bias = state_dict["entity_predictions.bias"]
entity_mask_bias = entity_prediction_bias[entity_vocab["[MASK]"]].unsqueeze(0)
state_dict["entity_predictions.bias"] = torch.cat([entity_prediction_bias, entity_mask_bias])
model = LukeForMaskedLM(config=config).eval()
state_dict.pop("entity_predictions.decoder.weight")
state_dict.pop("lm_head.decoder.weight")
state_dict.pop("lm_head.decoder.bias")
state_dict_for_hugging_face = OrderedDict()
for key, value in state_dict.items():
if not (key.startswith("lm_head") or key.startswith("entity_predictions")):
state_dict_for_hugging_face[f"luke.{key}"] = state_dict[key]
else:
state_dict_for_hugging_face[key] = state_dict[key]
missing_keys, unexpected_keys = model.load_state_dict(state_dict_for_hugging_face, strict=False)
if set(unexpected_keys) != {"luke.embeddings.position_ids"}:
raise ValueError(f"Unexpected unexpected_keys: {unexpected_keys}")
if set(missing_keys) != {
"lm_head.decoder.weight",
"lm_head.decoder.bias",
"entity_predictions.decoder.weight",
}:
raise ValueError(f"Unexpected missing_keys: {missing_keys}")
model.tie_weights()
assert (model.luke.embeddings.word_embeddings.weight == model.lm_head.decoder.weight).all()
assert (model.luke.entity_embeddings.entity_embeddings.weight == model.entity_predictions.decoder.weight).all()
# Check outputs
tokenizer = MLukeTokenizer.from_pretrained(pytorch_dump_folder_path, task="entity_classification")
text = "ISO 639-3 uses the code fas for the dialects spoken across Iran and アフガニスタン (Afghanistan)."
span = (0, 9)
encoding = tokenizer(text, entity_spans=[span], return_tensors="pt")
outputs = model(**encoding)
# Verify word hidden states
if model_size == "large":
raise NotImplementedError
else: # base
expected_shape = torch.Size((1, 33, 768))
expected_slice = torch.tensor([[0.0892, 0.0596, -0.2819], [0.0134, 0.1199, 0.0573], [-0.0169, 0.0927, 0.0644]])
if not (outputs.last_hidden_state.shape == expected_shape):
raise ValueError(
f"Outputs.last_hidden_state.shape is {outputs.last_hidden_state.shape}, Expected shape is {expected_shape}"
)
if not torch.allclose(outputs.last_hidden_state[0, :3, :3], expected_slice, atol=1e-4):
raise ValueError
# Verify entity hidden states
if model_size == "large":
raise NotImplementedError
else: # base
expected_shape = torch.Size((1, 1, 768))
expected_slice = torch.tensor([[-0.1482, 0.0609, 0.0322]])
if not (outputs.entity_last_hidden_state.shape == expected_shape):
raise ValueError(
f"Outputs.entity_last_hidden_state.shape is {outputs.entity_last_hidden_state.shape}, Expected shape is"
f" {expected_shape}"
)
if not torch.allclose(outputs.entity_last_hidden_state[0, :3, :3], expected_slice, atol=1e-4):
raise ValueError
# Verify masked word/entity prediction
tokenizer = MLukeTokenizer.from_pretrained(pytorch_dump_folder_path)
text = "Tokyo is the capital of <mask>."
span = (24, 30)
encoding = tokenizer(text, entity_spans=[span], return_tensors="pt")
outputs = model(**encoding)
input_ids = encoding["input_ids"][0].tolist()
mask_position_id = input_ids.index(tokenizer.convert_tokens_to_ids("<mask>"))
predicted_id = outputs.logits[0][mask_position_id].argmax(dim=-1)
assert "Japan" == tokenizer.decode(predicted_id)
predicted_entity_id = outputs.entity_logits[0][0].argmax().item()
multilingual_predicted_entities = [
entity for entity, entity_id in tokenizer.entity_vocab.items() if entity_id == predicted_entity_id
]
assert [e for e in multilingual_predicted_entities if e.startswith("en:")][0] == "en:Japan"
# Finally, save our PyTorch model and tokenizer
print("Saving PyTorch model to {}".format(pytorch_dump_folder_path))
model.save_pretrained(pytorch_dump_folder_path)
def load_original_entity_vocab(entity_vocab_path):
SPECIAL_TOKENS = ["[MASK]", "[PAD]", "[UNK]"]
data = [json.loads(line) for line in open(entity_vocab_path)]
new_mapping = {}
for entry in data:
entity_id = entry["id"]
for entity_name, language in entry["entities"]:
if entity_name in SPECIAL_TOKENS:
new_mapping[entity_name] = entity_id
break
new_entity_name = f"{language}:{entity_name}"
new_mapping[new_entity_name] = entity_id
return new_mapping
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument("--checkpoint_path", type=str, help="Path to a pytorch_model.bin file.")
parser.add_argument(
"--metadata_path", default=None, type=str, help="Path to a metadata.json file, defining the configuration."
)
parser.add_argument(
"--entity_vocab_path",
default=None,
type=str,
help="Path to an entity_vocab.tsv file, containing the entity vocabulary.",
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, help="Path to where to dump the output PyTorch model."
)
parser.add_argument(
"--model_size", default="base", type=str, choices=["base", "large"], help="Size of the model to be converted."
)
args = parser.parse_args()
convert_luke_checkpoint(
args.checkpoint_path,
args.metadata_path,
args.entity_vocab_path,
args.pytorch_dump_folder_path,
args.model_size,
)
|
233zzh/TitanDataOperationSystem | 1,649 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/baseAnalysis/function/UserStartFunction.scala | package cn.edu.neu.titan.titanSpark.migration.baseAnalysis.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.baseAnalysis.function.UserInstallFunction.migrate
import cn.edu.neu.titan.titanSpark.migration.{connectionProperties, currentDate, spark, tbCVJoin, url}
/**
* Created by IntelliJ IDEA.
*
* @Author: Wang Kuo
* @Email: 2383536228@qq.com
* @Date: 2020/7/12
* @Time: 17:33
* @Version: 1.0
* @Description: Description
*/
object UserStartFunction {
def migrate(): Unit = {
// 源表与目标表
val tbSource = Constants.HIVE_TABLE_ADS_USR_START_CUBE
val tbTarget = Constants.MYSQL_TABLE_USER_LAUNCH
val tbStart = "tbStart"
// 筛选表
val sql_select_start = "select " +
"case when version is NULL then '' else version end as version," +
"case when channel is NULL then '' else channel end as channel," +
s"start_num from $tbSource " +
s"where dt='$currentDate' and provinceid is NULL and model is NULL and os is NULL and resolution is NULL " +
"and carrier is NULL and network is NULL"
// 左外连接并转化name 为 id
val sql_join = s"select '$currentDate' launch_date, " +
"cid channel_id," +
"vid version_id," +
"case when start_num is NULL then 0 else start_num end as start_num " +
s"from $tbCVJoin left join $tbStart " +
"on vname=version and cname=channel"
// 执行sql语句
spark.sql(sql_select_start).createOrReplaceTempView(tbStart)
spark.sql(sql_join).write.mode("append").jdbc(url, tbTarget, connectionProperties)
}
def main(args: Array[String]): Unit = {
migrate()
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 1,356 | src/transformers/models/mluke/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_sentencepiece_available
_import_structure = {}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_mluke"] = ["MLukeTokenizer"]
if TYPE_CHECKING:
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_mluke import MLukeTokenizer
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
233zzh/TitanDataOperationSystem | 2,376 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/baseAnalysis/function/UserActiveFunction.scala | package cn.edu.neu.titan.titanSpark.migration.baseAnalysis.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.common.utils.DateUtils
import cn.edu.neu.titan.titanSpark.migration._
/**
* Created by IntelliJ IDEA.
*
* @Author: Wang Kuo
* @Email: 2383536228@qq.com
* @Date: 2020/7/12
* @Time: 15:29
* @Version: 1.0
* @Description: Description
*/
object UserActiveFunction {
def migrate() = {
// 源表与目标表
val tbDSource = Constants.HIVE_TABLE_ADS_USR_DAU_CUBE
val tbWSource = Constants.HIVE_TABLE_ADS_USR_WAU_CUBE
val tbMSource = Constants.HIVE_TABLE_ADS_USR_MAU_CUBE
val tbDTarget = Constants.MYSQL_TABLE_USER_ACTIVE_DAY
val tbWTarget = Constants.MYSQL_TABLE_USER_ACTIVE_WEEK
val tbMTarget = Constants.MYSQL_TABLE_USER_ACTIVE_MONTH
val tbDActive = "tbDActive"
val tbMActive = "tbMActive"
val tbWActive = "tbWActive"
val colDName = "dau_num"
val colWName = "wau_num"
val colMName = "mau_num"
executeActiveMigrate(tbDSource, tbDTarget, colDName, currentDate, tbDActive)
if (DateUtils.isFirstDayOfWeek(today)) executeActiveMigrate(tbWSource, tbWTarget, colWName, currentWeek, tbWActive)
if (DateUtils.isFirstDayOfMonth(today)) executeActiveMigrate(tbMSource, tbMTarget, colMName, currentMonth, tbMActive)
}
def executeActiveMigrate(tbSource: String, tbTarget: String, colName: String, date: String, tbActive: String) = {
val sql_select_active = "select " +
"case when version is NULL then '' else version end as version," +
"case when channel is NULL then '' else channel end as channel," +
s"dau_num active_num from $tbSource " +
s"where dt='$date' and provinceid is NULL and model is NULL and os is NULL and resolution is NULL " +
"and carrier is NULL and network is NULL"
// 左外连接并转化name 为 id
val sql_join = s"select '$date' active_date, " +
"cid channel_id," +
"vid version_id," +
"case when active_num is NULL then 0 else active_num end as active_num " +
s"from $tbCVJoin left join $tbActive " +
"on vname=version and cname=channel"
// 执行sql语句
spark.sql(sql_select_active).createOrReplaceTempView(tbActive)
spark.sql(sql_join).write.mode("append").jdbc(url, tbTarget, connectionProperties)
}
def main(args: Array[String]): Unit = {
migrate()
}
} |
27182812/ChatGLM-LLaMA-chinese-insturct | 81,121 | src/transformers/models/mluke/tokenization_mluke.py | # coding=utf-8
# Copyright 2021 Studio Ousia and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License
""" Tokenization classes for mLUKE."""
import itertools
import json
import os
from collections.abc import Mapping
from shutil import copyfile
from typing import Any, Dict, List, Optional, Tuple, Union
import numpy as np
import sentencepiece as spm
from ...tokenization_utils import PreTrainedTokenizer
from ...tokenization_utils_base import (
ENCODE_KWARGS_DOCSTRING,
AddedToken,
BatchEncoding,
EncodedInput,
PaddingStrategy,
TensorType,
TextInput,
TextInputPair,
TruncationStrategy,
to_py_obj,
)
from ...utils import add_end_docstrings, is_tf_tensor, is_torch_tensor, logging
logger = logging.get_logger(__name__)
EntitySpan = Tuple[int, int]
EntitySpanInput = List[EntitySpan]
Entity = str
EntityInput = List[Entity]
SPIECE_UNDERLINE = "▁"
VOCAB_FILES_NAMES = {"vocab_file": "sentencepiece.bpe.model", "entity_vocab_file": "entity_vocab.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"studio-ousia/mluke-base": "https://huggingface.co/studio-ousia/mluke-base/resolve/main/vocab.json",
},
"merges_file": {
"studio-ousia/mluke-base": "https://huggingface.co/studio-ousia/mluke-base/resolve/main/merges.txt",
},
"entity_vocab_file": {
"studio-ousia/mluke-base": "https://huggingface.co/studio-ousia/mluke-base/resolve/main/entity_vocab.json",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"studio-ousia/mluke-base": 512,
}
ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING = r"""
return_token_type_ids (`bool`, *optional*):
Whether to return token type IDs. If left to the default, will return the token type IDs according to
the specific tokenizer's default, defined by the `return_outputs` attribute.
[What are token type IDs?](../glossary#token-type-ids)
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific tokenizer's default, defined by the `return_outputs` attribute.
[What are attention masks?](../glossary#attention-mask)
return_overflowing_tokens (`bool`, *optional*, defaults to `False`):
Whether or not to return overflowing token sequences. If a pair of sequences of input ids (or a batch
of pairs) is provided with `truncation_strategy = longest_first` or `True`, an error is raised instead
of returning overflowing tokens.
return_special_tokens_mask (`bool`, *optional*, defaults to `False`):
Whether or not to return special tokens mask information.
return_offsets_mapping (`bool`, *optional*, defaults to `False`):
Whether or not to return `(char_start, char_end)` for each token.
This is only available on fast tokenizers inheriting from [`PreTrainedTokenizerFast`], if using
Python's tokenizer, this method will raise `NotImplementedError`.
return_length (`bool`, *optional*, defaults to `False`):
Whether or not to return the lengths of the encoded inputs.
verbose (`bool`, *optional*, defaults to `True`):
Whether or not to print more information and warnings.
**kwargs: passed to the `self.tokenize()` method
Return:
[`BatchEncoding`]: A [`BatchEncoding`] with the following fields:
- **input_ids** -- List of token ids to be fed to a model.
[What are input IDs?](../glossary#input-ids)
- **token_type_ids** -- List of token type ids to be fed to a model (when `return_token_type_ids=True` or
if *"token_type_ids"* is in `self.model_input_names`).
[What are token type IDs?](../glossary#token-type-ids)
- **attention_mask** -- List of indices specifying which tokens should be attended to by the model (when
`return_attention_mask=True` or if *"attention_mask"* is in `self.model_input_names`).
[What are attention masks?](../glossary#attention-mask)
- **entity_ids** -- List of entity ids to be fed to a model.
[What are input IDs?](../glossary#input-ids)
- **entity_position_ids** -- List of entity positions in the input sequence to be fed to a model.
- **entity_token_type_ids** -- List of entity token type ids to be fed to a model (when
`return_token_type_ids=True` or if *"entity_token_type_ids"* is in `self.model_input_names`).
[What are token type IDs?](../glossary#token-type-ids)
- **entity_attention_mask** -- List of indices specifying which entities should be attended to by the model
(when `return_attention_mask=True` or if *"entity_attention_mask"* is in `self.model_input_names`).
[What are attention masks?](../glossary#attention-mask)
- **entity_start_positions** -- List of the start positions of entities in the word token sequence (when
`task="entity_span_classification"`).
- **entity_end_positions** -- List of the end positions of entities in the word token sequence (when
`task="entity_span_classification"`).
- **overflowing_tokens** -- List of overflowing tokens sequences (when a `max_length` is specified and
`return_overflowing_tokens=True`).
- **num_truncated_tokens** -- Number of tokens truncated (when a `max_length` is specified and
`return_overflowing_tokens=True`).
- **special_tokens_mask** -- List of 0s and 1s, with 1 specifying added special tokens and 0 specifying
regular sequence tokens (when `add_special_tokens=True` and `return_special_tokens_mask=True`).
- **length** -- The length of the inputs (when `return_length=True`)
"""
class MLukeTokenizer(PreTrainedTokenizer):
"""
Adapted from [`XLMRobertaTokenizer`] and [`LukeTokenizer`]. Based on
[SentencePiece](https://github.com/google/sentencepiece).
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
entity_vocab_file (`str`):
Path to the entity vocabulary file.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
task (`str`, *optional*):
Task for which you want to prepare sequences. One of `"entity_classification"`,
`"entity_pair_classification"`, or `"entity_span_classification"`. If you specify this argument, the entity
sequence is automatically created based on the given entity span(s).
max_entity_length (`int`, *optional*, defaults to 32):
The maximum length of `entity_ids`.
max_mention_length (`int`, *optional*, defaults to 30):
The maximum number of tokens inside an entity span.
entity_token_1 (`str`, *optional*, defaults to `<ent>`):
The special token used to represent an entity span in a word token sequence. This token is only used when
`task` is set to `"entity_classification"` or `"entity_pair_classification"`.
entity_token_2 (`str`, *optional*, defaults to `<ent2>`):
The special token used to represent an entity span in a word token sequence. This token is only used when
`task` is set to `"entity_pair_classification"`.
additional_special_tokens (`List[str]`, *optional*, defaults to `["<s>NOTUSED", "</s>NOTUSED"]`):
Additional special tokens used by the tokenizer.
sp_model_kwargs (`dict`, *optional*):
Will be passed to the `SentencePieceProcessor.__init__()` method. The [Python wrapper for
SentencePiece](https://github.com/google/sentencepiece/tree/master/python) can be used, among other things,
to set:
- `enable_sampling`: Enable subword regularization.
- `nbest_size`: Sampling parameters for unigram. Invalid for BPE-Dropout.
- `nbest_size = {0,1}`: No sampling is performed.
- `nbest_size > 1`: samples from the nbest_size results.
- `nbest_size < 0`: assuming that nbest_size is infinite and samples from the all hypothesis (lattice)
using forward-filtering-and-backward-sampling algorithm.
- `alpha`: Smoothing parameter for unigram sampling, and dropout probability of merge operations for
BPE-dropout.
Attributes:
sp_model (`SentencePieceProcessor`):
The *SentencePiece* processor that is used for every conversion (string, tokens and IDs).
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
entity_vocab_file,
bos_token="<s>",
eos_token="</s>",
sep_token="</s>",
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
task=None,
max_entity_length=32,
max_mention_length=30,
entity_token_1="<ent>",
entity_token_2="<ent2>",
entity_unk_token="[UNK]",
entity_pad_token="[PAD]",
entity_mask_token="[MASK]",
entity_mask2_token="[MASK2]",
sp_model_kwargs: Optional[Dict[str, Any]] = None,
**kwargs,
) -> None:
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
# we add 2 special tokens for downstream tasks
# for more information about lstrip and rstrip, see https://github.com/huggingface/transformers/pull/2778
entity_token_1 = (
AddedToken(entity_token_1, lstrip=False, rstrip=False)
if isinstance(entity_token_1, str)
else entity_token_1
)
entity_token_2 = (
AddedToken(entity_token_2, lstrip=False, rstrip=False)
if isinstance(entity_token_2, str)
else entity_token_2
)
kwargs["additional_special_tokens"] = kwargs.get("additional_special_tokens", [])
kwargs["additional_special_tokens"] += [entity_token_1, entity_token_2]
self.sp_model_kwargs = {} if sp_model_kwargs is None else sp_model_kwargs
super().__init__(
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
cls_token=cls_token,
pad_token=pad_token,
mask_token=mask_token,
sp_model_kwargs=self.sp_model_kwargs,
task=task,
max_entity_length=max_entity_length,
max_mention_length=max_mention_length,
entity_token_1=entity_token_1,
entity_token_2=entity_token_2,
entity_unk_token=entity_unk_token,
entity_pad_token=entity_pad_token,
entity_mask_token=entity_mask_token,
entity_mask2_token=entity_mask2_token,
**kwargs,
)
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(str(vocab_file))
self.vocab_file = vocab_file
# Original fairseq vocab and spm vocab must be "aligned":
# Vocab | 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9
# -------- | ------- | ------- | ------ | ------- | --- | --- | --- | ----- | ----- | ----
# fairseq | '<s>' | '<pad>' | '</s>' | '<unk>' | ',' | '.' | '▁' | 's' | '▁de' | '-'
# spm | '<unk>' | '<s>' | '</s>' | ',' | '.' | '▁' | 's' | '▁de' | '-' | '▁a'
# Mimic fairseq token-to-id alignment for the first 4 token
self.fairseq_tokens_to_ids = {"<s>": 0, "<pad>": 1, "</s>": 2, "<unk>": 3}
# The first "real" token "," has position 4 in the original fairseq vocab and position 3 in the spm vocab
self.fairseq_offset = 1
self.fairseq_tokens_to_ids["<mask>"] = len(self.sp_model) + self.fairseq_offset
self.fairseq_ids_to_tokens = {v: k for k, v in self.fairseq_tokens_to_ids.items()}
with open(entity_vocab_file, encoding="utf-8") as entity_vocab_handle:
self.entity_vocab = json.load(entity_vocab_handle)
for entity_special_token in [entity_unk_token, entity_pad_token, entity_mask_token, entity_mask2_token]:
if entity_special_token not in self.entity_vocab:
raise ValueError(
f"Specified entity special token ``{entity_special_token}`` is not found in entity_vocab. "
f"Probably an incorrect entity vocab file is loaded: {entity_vocab_file}."
)
self.entity_unk_token_id = self.entity_vocab[entity_unk_token]
self.entity_pad_token_id = self.entity_vocab[entity_pad_token]
self.entity_mask_token_id = self.entity_vocab[entity_mask_token]
self.entity_mask2_token_id = self.entity_vocab[entity_mask2_token]
self.task = task
if task is None or task == "entity_span_classification":
self.max_entity_length = max_entity_length
elif task == "entity_classification":
self.max_entity_length = 1
elif task == "entity_pair_classification":
self.max_entity_length = 2
else:
raise ValueError(
f"Task {task} not supported. Select task from ['entity_classification', 'entity_pair_classification',"
" 'entity_span_classification'] only."
)
self.max_mention_length = max_mention_length
def __getstate__(self):
state = self.__dict__.copy()
state["sp_model"] = None
state["sp_model_proto"] = self.sp_model.serialized_model_proto()
return state
def __setstate__(self, d):
self.__dict__ = d
# for backward compatibility
if not hasattr(self, "sp_model_kwargs"):
self.sp_model_kwargs = {}
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.LoadFromSerializedProto(self.sp_model_proto)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer.__call__
def __call__(
self,
text: Union[TextInput, List[TextInput]],
text_pair: Optional[Union[TextInput, List[TextInput]]] = None,
entity_spans: Optional[Union[EntitySpanInput, List[EntitySpanInput]]] = None,
entity_spans_pair: Optional[Union[EntitySpanInput, List[EntitySpanInput]]] = None,
entities: Optional[Union[EntityInput, List[EntityInput]]] = None,
entities_pair: Optional[Union[EntityInput, List[EntityInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: Optional[bool] = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) or one or several pair(s) of
sequences, depending on the task you want to prepare them for.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence must be a string. Note that this
tokenizer does not support tokenization based on pretokenized strings.
text_pair (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence must be a string. Note that this
tokenizer does not support tokenization based on pretokenized strings.
entity_spans (`List[Tuple[int, int]]`, `List[List[Tuple[int, int]]]`, *optional*):
The sequence or batch of sequences of entity spans to be encoded. Each sequence consists of tuples each
with two integers denoting character-based start and end positions of entities. If you specify
`"entity_classification"` or `"entity_pair_classification"` as the `task` argument in the constructor,
the length of each sequence must be 1 or 2, respectively. If you specify `entities`, the length of each
sequence must be equal to the length of each sequence of `entities`.
entity_spans_pair (`List[Tuple[int, int]]`, `List[List[Tuple[int, int]]]`, *optional*):
The sequence or batch of sequences of entity spans to be encoded. Each sequence consists of tuples each
with two integers denoting character-based start and end positions of entities. If you specify the
`task` argument in the constructor, this argument is ignored. If you specify `entities_pair`, the
length of each sequence must be equal to the length of each sequence of `entities_pair`.
entities (`List[str]`, `List[List[str]]`, *optional*):
The sequence or batch of sequences of entities to be encoded. Each sequence consists of strings
representing entities, i.e., special entities (e.g., [MASK]) or entity titles of Wikipedia (e.g., Los
Angeles). This argument is ignored if you specify the `task` argument in the constructor. The length of
each sequence must be equal to the length of each sequence of `entity_spans`. If you specify
`entity_spans` without specifying this argument, the entity sequence or the batch of entity sequences
is automatically constructed by filling it with the [MASK] entity.
entities_pair (`List[str]`, `List[List[str]]`, *optional*):
The sequence or batch of sequences of entities to be encoded. Each sequence consists of strings
representing entities, i.e., special entities (e.g., [MASK]) or entity titles of Wikipedia (e.g., Los
Angeles). This argument is ignored if you specify the `task` argument in the constructor. The length of
each sequence must be equal to the length of each sequence of `entity_spans_pair`. If you specify
`entity_spans_pair` without specifying this argument, the entity sequence or the batch of entity
sequences is automatically constructed by filling it with the [MASK] entity.
max_entity_length (`int`, *optional*):
The maximum length of `entity_ids`.
"""
# Input type checking for clearer error
is_valid_single_text = isinstance(text, str)
is_valid_batch_text = isinstance(text, (list, tuple)) and (len(text) == 0 or (isinstance(text[0], str)))
if not (is_valid_single_text or is_valid_batch_text):
raise ValueError("text input must be of type `str` (single example) or `List[str]` (batch).")
is_valid_single_text_pair = isinstance(text_pair, str)
is_valid_batch_text_pair = isinstance(text_pair, (list, tuple)) and (
len(text_pair) == 0 or isinstance(text_pair[0], str)
)
if not (text_pair is None or is_valid_single_text_pair or is_valid_batch_text_pair):
raise ValueError("text_pair input must be of type `str` (single example) or `List[str]` (batch).")
is_batched = bool(isinstance(text, (list, tuple)))
if is_batched:
batch_text_or_text_pairs = list(zip(text, text_pair)) if text_pair is not None else text
if entities is None:
batch_entities_or_entities_pairs = None
else:
batch_entities_or_entities_pairs = (
list(zip(entities, entities_pair)) if entities_pair is not None else entities
)
if entity_spans is None:
batch_entity_spans_or_entity_spans_pairs = None
else:
batch_entity_spans_or_entity_spans_pairs = (
list(zip(entity_spans, entity_spans_pair)) if entity_spans_pair is not None else entity_spans
)
return self.batch_encode_plus(
batch_text_or_text_pairs=batch_text_or_text_pairs,
batch_entity_spans_or_entity_spans_pairs=batch_entity_spans_or_entity_spans_pairs,
batch_entities_or_entities_pairs=batch_entities_or_entities_pairs,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
text=text,
text_pair=text_pair,
entity_spans=entity_spans,
entity_spans_pair=entity_spans_pair,
entities=entities,
entities_pair=entities_pair,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
is_split_into_words=is_split_into_words,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._encode_plus
def _encode_plus(
self,
text: Union[TextInput],
text_pair: Optional[Union[TextInput]] = None,
entity_spans: Optional[EntitySpanInput] = None,
entity_spans_pair: Optional[EntitySpanInput] = None,
entities: Optional[EntityInput] = None,
entities_pair: Optional[EntityInput] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: Optional[bool] = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast. "
"More information on available tokenizers at "
"https://github.com/huggingface/transformers/pull/2674"
)
if is_split_into_words:
raise NotImplementedError("is_split_into_words is not supported in this tokenizer.")
(
first_ids,
second_ids,
first_entity_ids,
second_entity_ids,
first_entity_token_spans,
second_entity_token_spans,
) = self._create_input_sequence(
text=text,
text_pair=text_pair,
entities=entities,
entities_pair=entities_pair,
entity_spans=entity_spans,
entity_spans_pair=entity_spans_pair,
**kwargs,
)
# prepare_for_model will create the attention_mask and token_type_ids
return self.prepare_for_model(
first_ids,
pair_ids=second_ids,
entity_ids=first_entity_ids,
pair_entity_ids=second_entity_ids,
entity_token_spans=first_entity_token_spans,
pair_entity_token_spans=second_entity_token_spans,
add_special_tokens=add_special_tokens,
padding=padding_strategy.value,
truncation=truncation_strategy.value,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._batch_encode_plus
def _batch_encode_plus(
self,
batch_text_or_text_pairs: Union[List[TextInput], List[TextInputPair]],
batch_entity_spans_or_entity_spans_pairs: Optional[
Union[List[EntitySpanInput], List[Tuple[EntitySpanInput, EntitySpanInput]]]
] = None,
batch_entities_or_entities_pairs: Optional[
Union[List[EntityInput], List[Tuple[EntityInput, EntityInput]]]
] = None,
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
is_split_into_words: Optional[bool] = False,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
if is_split_into_words:
raise NotImplementedError("is_split_into_words is not supported in this tokenizer.")
# input_ids is a list of tuples (one for each example in the batch)
input_ids = []
entity_ids = []
entity_token_spans = []
for index, text_or_text_pair in enumerate(batch_text_or_text_pairs):
if not isinstance(text_or_text_pair, (list, tuple)):
text, text_pair = text_or_text_pair, None
else:
text, text_pair = text_or_text_pair
entities, entities_pair = None, None
if batch_entities_or_entities_pairs is not None:
entities_or_entities_pairs = batch_entities_or_entities_pairs[index]
if entities_or_entities_pairs:
if isinstance(entities_or_entities_pairs[0], str):
entities, entities_pair = entities_or_entities_pairs, None
else:
entities, entities_pair = entities_or_entities_pairs
entity_spans, entity_spans_pair = None, None
if batch_entity_spans_or_entity_spans_pairs is not None:
entity_spans_or_entity_spans_pairs = batch_entity_spans_or_entity_spans_pairs[index]
if len(entity_spans_or_entity_spans_pairs) > 0 and isinstance(
entity_spans_or_entity_spans_pairs[0], list
):
entity_spans, entity_spans_pair = entity_spans_or_entity_spans_pairs
else:
entity_spans, entity_spans_pair = entity_spans_or_entity_spans_pairs, None
(
first_ids,
second_ids,
first_entity_ids,
second_entity_ids,
first_entity_token_spans,
second_entity_token_spans,
) = self._create_input_sequence(
text=text,
text_pair=text_pair,
entities=entities,
entities_pair=entities_pair,
entity_spans=entity_spans,
entity_spans_pair=entity_spans_pair,
**kwargs,
)
input_ids.append((first_ids, second_ids))
entity_ids.append((first_entity_ids, second_entity_ids))
entity_token_spans.append((first_entity_token_spans, second_entity_token_spans))
batch_outputs = self._batch_prepare_for_model(
input_ids,
batch_entity_ids_pairs=entity_ids,
batch_entity_token_spans_pairs=entity_token_spans,
add_special_tokens=add_special_tokens,
padding_strategy=padding_strategy,
truncation_strategy=truncation_strategy,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=return_tensors,
verbose=verbose,
)
return BatchEncoding(batch_outputs)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._check_entity_input_format
def _check_entity_input_format(self, entities: Optional[EntityInput], entity_spans: Optional[EntitySpanInput]):
if not isinstance(entity_spans, list):
raise ValueError("entity_spans should be given as a list")
elif len(entity_spans) > 0 and not isinstance(entity_spans[0], tuple):
raise ValueError(
"entity_spans should be given as a list of tuples containing the start and end character indices"
)
if entities is not None:
if not isinstance(entities, list):
raise ValueError("If you specify entities, they should be given as a list")
if len(entities) > 0 and not isinstance(entities[0], str):
raise ValueError("If you specify entities, they should be given as a list of entity names")
if len(entities) != len(entity_spans):
raise ValueError("If you specify entities, entities and entity_spans must be the same length")
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._create_input_sequence
def _create_input_sequence(
self,
text: Union[TextInput],
text_pair: Optional[Union[TextInput]] = None,
entities: Optional[EntityInput] = None,
entities_pair: Optional[EntityInput] = None,
entity_spans: Optional[EntitySpanInput] = None,
entity_spans_pair: Optional[EntitySpanInput] = None,
**kwargs,
) -> Tuple[list, list, list, list, list, list]:
def get_input_ids(text):
tokens = self.tokenize(text, **kwargs)
return self.convert_tokens_to_ids(tokens)
def get_input_ids_and_entity_token_spans(text, entity_spans):
if entity_spans is None:
return get_input_ids(text), None
cur = 0
input_ids = []
entity_token_spans = [None] * len(entity_spans)
split_char_positions = sorted(frozenset(itertools.chain(*entity_spans)))
char_pos2token_pos = {}
for split_char_position in split_char_positions:
orig_split_char_position = split_char_position
if (
split_char_position > 0 and text[split_char_position - 1] == " "
): # whitespace should be prepended to the following token
split_char_position -= 1
if cur != split_char_position:
input_ids += get_input_ids(text[cur:split_char_position])
cur = split_char_position
char_pos2token_pos[orig_split_char_position] = len(input_ids)
input_ids += get_input_ids(text[cur:])
entity_token_spans = [
(char_pos2token_pos[char_start], char_pos2token_pos[char_end]) for char_start, char_end in entity_spans
]
return input_ids, entity_token_spans
first_ids, second_ids = None, None
first_entity_ids, second_entity_ids = None, None
first_entity_token_spans, second_entity_token_spans = None, None
if self.task is None:
if entity_spans is None:
first_ids = get_input_ids(text)
else:
self._check_entity_input_format(entities, entity_spans)
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
if entities is None:
first_entity_ids = [self.entity_mask_token_id] * len(entity_spans)
else:
first_entity_ids = [self.entity_vocab.get(entity, self.entity_unk_token_id) for entity in entities]
if text_pair is not None:
if entity_spans_pair is None:
second_ids = get_input_ids(text_pair)
else:
self._check_entity_input_format(entities_pair, entity_spans_pair)
second_ids, second_entity_token_spans = get_input_ids_and_entity_token_spans(
text_pair, entity_spans_pair
)
if entities_pair is None:
second_entity_ids = [self.entity_mask_token_id] * len(entity_spans_pair)
else:
second_entity_ids = [
self.entity_vocab.get(entity, self.entity_unk_token_id) for entity in entities_pair
]
elif self.task == "entity_classification":
if not (isinstance(entity_spans, list) and len(entity_spans) == 1 and isinstance(entity_spans[0], tuple)):
raise ValueError(
"Entity spans should be a list containing a single tuple "
"containing the start and end character indices of an entity"
)
first_entity_ids = [self.entity_mask_token_id]
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
# add special tokens to input ids
entity_token_start, entity_token_end = first_entity_token_spans[0]
first_ids = (
first_ids[:entity_token_end] + [self.additional_special_tokens_ids[0]] + first_ids[entity_token_end:]
)
first_ids = (
first_ids[:entity_token_start]
+ [self.additional_special_tokens_ids[0]]
+ first_ids[entity_token_start:]
)
first_entity_token_spans = [(entity_token_start, entity_token_end + 2)]
elif self.task == "entity_pair_classification":
if not (
isinstance(entity_spans, list)
and len(entity_spans) == 2
and isinstance(entity_spans[0], tuple)
and isinstance(entity_spans[1], tuple)
):
raise ValueError(
"Entity spans should be provided as a list of two tuples, "
"each tuple containing the start and end character indices of an entity"
)
head_span, tail_span = entity_spans
first_entity_ids = [self.entity_mask_token_id, self.entity_mask2_token_id]
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
head_token_span, tail_token_span = first_entity_token_spans
token_span_with_special_token_ids = [
(head_token_span, self.additional_special_tokens_ids[0]),
(tail_token_span, self.additional_special_tokens_ids[1]),
]
if head_token_span[0] < tail_token_span[0]:
first_entity_token_spans[0] = (head_token_span[0], head_token_span[1] + 2)
first_entity_token_spans[1] = (tail_token_span[0] + 2, tail_token_span[1] + 4)
token_span_with_special_token_ids = reversed(token_span_with_special_token_ids)
else:
first_entity_token_spans[0] = (head_token_span[0] + 2, head_token_span[1] + 4)
first_entity_token_spans[1] = (tail_token_span[0], tail_token_span[1] + 2)
for (entity_token_start, entity_token_end), special_token_id in token_span_with_special_token_ids:
first_ids = first_ids[:entity_token_end] + [special_token_id] + first_ids[entity_token_end:]
first_ids = first_ids[:entity_token_start] + [special_token_id] + first_ids[entity_token_start:]
elif self.task == "entity_span_classification":
if not (isinstance(entity_spans, list) and len(entity_spans) > 0 and isinstance(entity_spans[0], tuple)):
raise ValueError(
"Entity spans should be provided as a list of tuples, "
"each tuple containing the start and end character indices of an entity"
)
first_ids, first_entity_token_spans = get_input_ids_and_entity_token_spans(text, entity_spans)
first_entity_ids = [self.entity_mask_token_id] * len(entity_spans)
else:
raise ValueError(f"Task {self.task} not supported")
return (
first_ids,
second_ids,
first_entity_ids,
second_entity_ids,
first_entity_token_spans,
second_entity_token_spans,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._batch_prepare_for_model
def _batch_prepare_for_model(
self,
batch_ids_pairs: List[Tuple[List[int], None]],
batch_entity_ids_pairs: List[Tuple[Optional[List[int]], Optional[List[int]]]],
batch_entity_token_spans_pairs: List[Tuple[Optional[List[Tuple[int, int]]], Optional[List[Tuple[int, int]]]]],
add_special_tokens: bool = True,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
truncation_strategy: TruncationStrategy = TruncationStrategy.DO_NOT_TRUNCATE,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[str] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_length: bool = False,
verbose: bool = True,
) -> BatchEncoding:
"""
Prepares a sequence of input id, or a pair of sequences of inputs ids so that it can be used by the model. It
adds special tokens, truncates sequences if overflowing while taking into account the special tokens and
manages a moving window (with user defined stride) for overflowing tokens
Args:
batch_ids_pairs: list of tokenized input ids or input ids pairs
batch_entity_ids_pairs: list of entity ids or entity ids pairs
batch_entity_token_spans_pairs: list of entity spans or entity spans pairs
max_entity_length: The maximum length of the entity sequence.
"""
batch_outputs = {}
for input_ids, entity_ids, entity_token_span_pairs in zip(
batch_ids_pairs, batch_entity_ids_pairs, batch_entity_token_spans_pairs
):
first_ids, second_ids = input_ids
first_entity_ids, second_entity_ids = entity_ids
first_entity_token_spans, second_entity_token_spans = entity_token_span_pairs
outputs = self.prepare_for_model(
first_ids,
second_ids,
entity_ids=first_entity_ids,
pair_entity_ids=second_entity_ids,
entity_token_spans=first_entity_token_spans,
pair_entity_token_spans=second_entity_token_spans,
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterward
truncation=truncation_strategy.value,
max_length=max_length,
max_entity_length=max_entity_length,
stride=stride,
pad_to_multiple_of=None, # we pad in batch afterward
return_attention_mask=False, # we pad in batch afterward
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding_strategy.value,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return batch_outputs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer.prepare_for_model
def prepare_for_model(
self,
ids: List[int],
pair_ids: Optional[List[int]] = None,
entity_ids: Optional[List[int]] = None,
pair_entity_ids: Optional[List[int]] = None,
entity_token_spans: Optional[List[Tuple[int, int]]] = None,
pair_entity_token_spans: Optional[List[Tuple[int, int]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TruncationStrategy] = None,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
stride: int = 0,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs,
) -> BatchEncoding:
"""
Prepares a sequence of input id, entity id and entity span, or a pair of sequences of inputs ids, entity ids,
entity spans so that it can be used by the model. It adds special tokens, truncates sequences if overflowing
while taking into account the special tokens and manages a moving window (with user defined stride) for
overflowing tokens. Please Note, for *pair_ids* different than `None` and *truncation_strategy = longest_first*
or `True`, it is not possible to return overflowing tokens. Such a combination of arguments will raise an
error.
Args:
ids (`List[int]`):
Tokenized input ids of the first sequence.
pair_ids (`List[int]`, *optional*):
Tokenized input ids of the second sequence.
entity_ids (`List[int]`, *optional*):
Entity ids of the first sequence.
pair_entity_ids (`List[int]`, *optional*):
Entity ids of the second sequence.
entity_token_spans (`List[Tuple[int, int]]`, *optional*):
Entity spans of the first sequence.
pair_entity_token_spans (`List[Tuple[int, int]]`, *optional*):
Entity spans of the second sequence.
max_entity_length (`int`, *optional*):
The maximum length of the entity sequence.
"""
# Backward compatibility for 'truncation_strategy', 'pad_to_max_length'
padding_strategy, truncation_strategy, max_length, kwargs = self._get_padding_truncation_strategies(
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
verbose=verbose,
**kwargs,
)
# Compute lengths
pair = bool(pair_ids is not None)
len_ids = len(ids)
len_pair_ids = len(pair_ids) if pair else 0
if return_token_type_ids and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
if (
return_overflowing_tokens
and truncation_strategy == TruncationStrategy.LONGEST_FIRST
and pair_ids is not None
):
raise ValueError(
"Not possible to return overflowing tokens for pair of sequences with the "
"`longest_first`. Please select another truncation strategy than `longest_first`, "
"for instance `only_second` or `only_first`."
)
# Load from model defaults
if return_token_type_ids is None:
return_token_type_ids = "token_type_ids" in self.model_input_names
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
encoded_inputs = {}
# Compute the total size of the returned word encodings
total_len = len_ids + len_pair_ids + (self.num_special_tokens_to_add(pair=pair) if add_special_tokens else 0)
# Truncation: Handle max sequence length and max_entity_length
overflowing_tokens = []
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE and max_length and total_len > max_length:
# truncate words up to max_length
ids, pair_ids, overflowing_tokens = self.truncate_sequences(
ids,
pair_ids=pair_ids,
num_tokens_to_remove=total_len - max_length,
truncation_strategy=truncation_strategy,
stride=stride,
)
if return_overflowing_tokens:
encoded_inputs["overflowing_tokens"] = overflowing_tokens
encoded_inputs["num_truncated_tokens"] = total_len - max_length
# Add special tokens
if add_special_tokens:
sequence = self.build_inputs_with_special_tokens(ids, pair_ids)
token_type_ids = self.create_token_type_ids_from_sequences(ids, pair_ids)
entity_token_offset = 1 # 1 * <s> token
pair_entity_token_offset = len(ids) + 3 # 1 * <s> token & 2 * <sep> tokens
else:
sequence = ids + pair_ids if pair else ids
token_type_ids = [0] * len(ids) + ([0] * len(pair_ids) if pair else [])
entity_token_offset = 0
pair_entity_token_offset = len(ids)
# Build output dictionary
encoded_inputs["input_ids"] = sequence
if return_token_type_ids:
encoded_inputs["token_type_ids"] = token_type_ids
if return_special_tokens_mask:
if add_special_tokens:
encoded_inputs["special_tokens_mask"] = self.get_special_tokens_mask(ids, pair_ids)
else:
encoded_inputs["special_tokens_mask"] = [0] * len(sequence)
# Set max entity length
if not max_entity_length:
max_entity_length = self.max_entity_length
if entity_ids is not None:
total_entity_len = 0
num_invalid_entities = 0
valid_entity_ids = [ent_id for ent_id, span in zip(entity_ids, entity_token_spans) if span[1] <= len(ids)]
valid_entity_token_spans = [span for span in entity_token_spans if span[1] <= len(ids)]
total_entity_len += len(valid_entity_ids)
num_invalid_entities += len(entity_ids) - len(valid_entity_ids)
valid_pair_entity_ids, valid_pair_entity_token_spans = None, None
if pair_entity_ids is not None:
valid_pair_entity_ids = [
ent_id
for ent_id, span in zip(pair_entity_ids, pair_entity_token_spans)
if span[1] <= len(pair_ids)
]
valid_pair_entity_token_spans = [span for span in pair_entity_token_spans if span[1] <= len(pair_ids)]
total_entity_len += len(valid_pair_entity_ids)
num_invalid_entities += len(pair_entity_ids) - len(valid_pair_entity_ids)
if num_invalid_entities != 0:
logger.warning(
f"{num_invalid_entities} entities are ignored because their entity spans are invalid due to the"
" truncation of input tokens"
)
if truncation_strategy != TruncationStrategy.DO_NOT_TRUNCATE and total_entity_len > max_entity_length:
# truncate entities up to max_entity_length
valid_entity_ids, valid_pair_entity_ids, overflowing_entities = self.truncate_sequences(
valid_entity_ids,
pair_ids=valid_pair_entity_ids,
num_tokens_to_remove=total_entity_len - max_entity_length,
truncation_strategy=truncation_strategy,
stride=stride,
)
valid_entity_token_spans = valid_entity_token_spans[: len(valid_entity_ids)]
if valid_pair_entity_token_spans is not None:
valid_pair_entity_token_spans = valid_pair_entity_token_spans[: len(valid_pair_entity_ids)]
if return_overflowing_tokens:
encoded_inputs["overflowing_entities"] = overflowing_entities
encoded_inputs["num_truncated_entities"] = total_entity_len - max_entity_length
final_entity_ids = valid_entity_ids + valid_pair_entity_ids if valid_pair_entity_ids else valid_entity_ids
encoded_inputs["entity_ids"] = list(final_entity_ids)
entity_position_ids = []
entity_start_positions = []
entity_end_positions = []
for token_spans, offset in (
(valid_entity_token_spans, entity_token_offset),
(valid_pair_entity_token_spans, pair_entity_token_offset),
):
if token_spans is not None:
for start, end in token_spans:
start += offset
end += offset
position_ids = list(range(start, end))[: self.max_mention_length]
position_ids += [-1] * (self.max_mention_length - end + start)
entity_position_ids.append(position_ids)
entity_start_positions.append(start)
entity_end_positions.append(end - 1)
encoded_inputs["entity_position_ids"] = entity_position_ids
if self.task == "entity_span_classification":
encoded_inputs["entity_start_positions"] = entity_start_positions
encoded_inputs["entity_end_positions"] = entity_end_positions
if return_token_type_ids:
encoded_inputs["entity_token_type_ids"] = [0] * len(encoded_inputs["entity_ids"])
# Check lengths
self._eventual_warn_about_too_long_sequence(encoded_inputs["input_ids"], max_length, verbose)
# Padding
if padding_strategy != PaddingStrategy.DO_NOT_PAD or return_attention_mask:
encoded_inputs = self.pad(
encoded_inputs,
max_length=max_length,
max_entity_length=max_entity_length,
padding=padding_strategy.value,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
if return_length:
encoded_inputs["length"] = len(encoded_inputs["input_ids"])
batch_outputs = BatchEncoding(
encoded_inputs, tensor_type=return_tensors, prepend_batch_axis=prepend_batch_axis
)
return batch_outputs
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer.pad
def pad(
self,
encoded_inputs: Union[
BatchEncoding,
List[BatchEncoding],
Dict[str, EncodedInput],
Dict[str, List[EncodedInput]],
List[Dict[str, EncodedInput]],
],
padding: Union[bool, str, PaddingStrategy] = True,
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
verbose: bool = True,
) -> BatchEncoding:
"""
Pad a single encoded input or a batch of encoded inputs up to predefined length or to the max sequence length
in the batch. Padding side (left/right) padding token ids are defined at the tokenizer level (with
`self.padding_side`, `self.pad_token_id` and `self.pad_token_type_id`) .. note:: If the `encoded_inputs` passed
are dictionary of numpy arrays, PyTorch tensors or TensorFlow tensors, the result will use the same type unless
you provide a different tensor type with `return_tensors`. In the case of PyTorch tensors, you will lose the
specific device of your tensors however.
Args:
encoded_inputs ([`BatchEncoding`], list of [`BatchEncoding`], `Dict[str, List[int]]`, `Dict[str, List[List[int]]` or `List[Dict[str, List[int]]]`):
Tokenized inputs. Can represent one input ([`BatchEncoding`] or `Dict[str, List[int]]`) or a batch of
tokenized inputs (list of [`BatchEncoding`], *Dict[str, List[List[int]]]* or *List[Dict[str,
List[int]]]*) so you can use this method during preprocessing as well as in a PyTorch Dataloader
collate function. Instead of `List[int]` you can have tensors (numpy arrays, PyTorch tensors or
TensorFlow tensors), see the note above for the return type.
padding (`bool`, `str` or [`~utils.PaddingStrategy`], *optional*, defaults to `True`):
Select a strategy to pad the returned sequences (according to the model's padding side and padding
index) among:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
max_length (`int`, *optional*):
Maximum length of the returned list and optionally padding length (see above).
max_entity_length (`int`, *optional*):
The maximum length of the entity sequence.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value. This is especially useful to enable
the use of Tensor Cores on NVIDIA hardware with compute capability `>= 7.5` (Volta).
return_attention_mask (`bool`, *optional*):
Whether to return the attention mask. If left to the default, will return the attention mask according
to the specific tokenizer's default, defined by the `return_outputs` attribute. [What are attention
masks?](../glossary#attention-mask)
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
verbose (`bool`, *optional*, defaults to `True`):
Whether or not to print more information and warnings.
"""
# If we have a list of dicts, let's convert it in a dict of lists
# We do this to allow using this method as a collate_fn function in PyTorch Dataloader
if isinstance(encoded_inputs, (list, tuple)) and isinstance(encoded_inputs[0], Mapping):
encoded_inputs = {key: [example[key] for example in encoded_inputs] for key in encoded_inputs[0].keys()}
# The model's main input name, usually `input_ids`, has be passed for padding
if self.model_input_names[0] not in encoded_inputs:
raise ValueError(
"You should supply an encoding or a list of encodings to this method "
f"that includes {self.model_input_names[0]}, but you provided {list(encoded_inputs.keys())}"
)
required_input = encoded_inputs[self.model_input_names[0]]
if not required_input:
if return_attention_mask:
encoded_inputs["attention_mask"] = []
return encoded_inputs
# If we have PyTorch/TF/NumPy tensors/arrays as inputs, we cast them as python objects
# and rebuild them afterwards if no return_tensors is specified
# Note that we lose the specific device the tensor may be on for PyTorch
first_element = required_input[0]
if isinstance(first_element, (list, tuple)):
# first_element might be an empty list/tuple in some edge cases so we grab the first non empty element.
index = 0
while len(required_input[index]) == 0:
index += 1
if index < len(required_input):
first_element = required_input[index][0]
# At this state, if `first_element` is still a list/tuple, it's an empty one so there is nothing to do.
if not isinstance(first_element, (int, list, tuple)):
if is_tf_tensor(first_element):
return_tensors = "tf" if return_tensors is None else return_tensors
elif is_torch_tensor(first_element):
return_tensors = "pt" if return_tensors is None else return_tensors
elif isinstance(first_element, np.ndarray):
return_tensors = "np" if return_tensors is None else return_tensors
else:
raise ValueError(
f"type of {first_element} unknown: {type(first_element)}. "
"Should be one of a python, numpy, pytorch or tensorflow object."
)
for key, value in encoded_inputs.items():
encoded_inputs[key] = to_py_obj(value)
# Convert padding_strategy in PaddingStrategy
padding_strategy, _, max_length, _ = self._get_padding_truncation_strategies(
padding=padding, max_length=max_length, verbose=verbose
)
if max_entity_length is None:
max_entity_length = self.max_entity_length
required_input = encoded_inputs[self.model_input_names[0]]
if required_input and not isinstance(required_input[0], (list, tuple)):
encoded_inputs = self._pad(
encoded_inputs,
max_length=max_length,
max_entity_length=max_entity_length,
padding_strategy=padding_strategy,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
return BatchEncoding(encoded_inputs, tensor_type=return_tensors)
batch_size = len(required_input)
if any(len(v) != batch_size for v in encoded_inputs.values()):
raise ValueError("Some items in the output dictionary have a different batch size than others.")
if padding_strategy == PaddingStrategy.LONGEST:
max_length = max(len(inputs) for inputs in required_input)
max_entity_length = (
max(len(inputs) for inputs in encoded_inputs["entity_ids"]) if "entity_ids" in encoded_inputs else 0
)
padding_strategy = PaddingStrategy.MAX_LENGTH
batch_outputs = {}
for i in range(batch_size):
inputs = {k: v[i] for k, v in encoded_inputs.items()}
outputs = self._pad(
inputs,
max_length=max_length,
max_entity_length=max_entity_length,
padding_strategy=padding_strategy,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
return BatchEncoding(batch_outputs, tensor_type=return_tensors)
# Copied from transformers.models.luke.tokenization_luke.LukeTokenizer._pad
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
max_entity_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
Args:
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
max_entity_length: The maximum length of the entity sequence.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
`>= 7.5` (Volta).
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
entities_provided = bool("entity_ids" in encoded_inputs)
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(encoded_inputs["input_ids"])
if entities_provided:
max_entity_length = len(encoded_inputs["entity_ids"])
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
if (
entities_provided
and max_entity_length is not None
and pad_to_multiple_of is not None
and (max_entity_length % pad_to_multiple_of != 0)
):
max_entity_length = ((max_entity_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = padding_strategy != PaddingStrategy.DO_NOT_PAD and (
len(encoded_inputs["input_ids"]) != max_length
or (entities_provided and len(encoded_inputs["entity_ids"]) != max_entity_length)
)
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(encoded_inputs["input_ids"])
if entities_provided and return_attention_mask and "entity_attention_mask" not in encoded_inputs:
encoded_inputs["entity_attention_mask"] = [1] * len(encoded_inputs["entity_ids"])
if needs_to_be_padded:
difference = max_length - len(encoded_inputs["input_ids"])
if entities_provided:
entity_difference = max_entity_length - len(encoded_inputs["entity_ids"])
if self.padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if entities_provided:
encoded_inputs["entity_attention_mask"] = (
encoded_inputs["entity_attention_mask"] + [0] * entity_difference
)
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = encoded_inputs["token_type_ids"] + [0] * difference
if entities_provided:
encoded_inputs["entity_token_type_ids"] = (
encoded_inputs["entity_token_type_ids"] + [0] * entity_difference
)
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs["input_ids"] = encoded_inputs["input_ids"] + [self.pad_token_id] * difference
if entities_provided:
encoded_inputs["entity_ids"] = (
encoded_inputs["entity_ids"] + [self.entity_pad_token_id] * entity_difference
)
encoded_inputs["entity_position_ids"] = (
encoded_inputs["entity_position_ids"] + [[-1] * self.max_mention_length] * entity_difference
)
if self.task == "entity_span_classification":
encoded_inputs["entity_start_positions"] = (
encoded_inputs["entity_start_positions"] + [0] * entity_difference
)
encoded_inputs["entity_end_positions"] = (
encoded_inputs["entity_end_positions"] + [0] * entity_difference
)
elif self.padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if entities_provided:
encoded_inputs["entity_attention_mask"] = [0] * entity_difference + encoded_inputs[
"entity_attention_mask"
]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [0] * difference + encoded_inputs["token_type_ids"]
if entities_provided:
encoded_inputs["entity_token_type_ids"] = [0] * entity_difference + encoded_inputs[
"entity_token_type_ids"
]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs["input_ids"] = [self.pad_token_id] * difference + encoded_inputs["input_ids"]
if entities_provided:
encoded_inputs["entity_ids"] = [self.entity_pad_token_id] * entity_difference + encoded_inputs[
"entity_ids"
]
encoded_inputs["entity_position_ids"] = [
[-1] * self.max_mention_length
] * entity_difference + encoded_inputs["entity_position_ids"]
if self.task == "entity_span_classification":
encoded_inputs["entity_start_positions"] = [0] * entity_difference + encoded_inputs[
"entity_start_positions"
]
encoded_inputs["entity_end_positions"] = [0] * entity_difference + encoded_inputs[
"entity_end_positions"
]
else:
raise ValueError("Invalid padding strategy:" + str(self.padding_side))
return encoded_inputs
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str, str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file):
copyfile(self.vocab_file, out_vocab_file)
entity_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["entity_vocab_file"]
)
with open(entity_vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.entity_vocab, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
return out_vocab_file, entity_vocab_file
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.build_inputs_with_special_tokens
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. An XLM-RoBERTa sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s></s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + sep + token_ids_1 + sep
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.get_special_tokens_mask
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1, 1] + ([0] * len(token_ids_1)) + [1]
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.create_token_type_ids_from_sequences
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. XLM-RoBERTa does
not make use of token type ids, therefore a list of zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep + sep + token_ids_1 + sep) * [0]
@property
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.vocab_size
def vocab_size(self):
return len(self.sp_model) + self.fairseq_offset + 1 # Add the <mask> token
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer.get_vocab
def get_vocab(self):
vocab = {self.convert_ids_to_tokens(i): i for i in range(self.vocab_size)}
vocab.update(self.added_tokens_encoder)
return vocab
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer._tokenize
def _tokenize(self, text: str) -> List[str]:
return self.sp_model.encode(text, out_type=str)
# Copied from transformers.models.xlm_roberta.tokenization_xlm_roberta.XLMRobertaTokenizer._convert_token_to_id
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
if token in self.fairseq_tokens_to_ids:
return self.fairseq_tokens_to_ids[token]
spm_id = self.sp_model.PieceToId(token)
# Need to return unknown token if the SP model returned 0
return spm_id + self.fairseq_offset if spm_id else self.unk_token_id
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
if index in self.fairseq_ids_to_tokens:
return self.fairseq_ids_to_tokens[index]
return self.sp_model.IdToPiece(index - self.fairseq_offset)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (strings for sub-words) in a single string."""
out_string = "".join(tokens).replace(SPIECE_UNDERLINE, " ").strip()
return out_string
|
27182812/ChatGLM-LLaMA-chinese-insturct | 13,896 | src/transformers/models/xlm_prophetnet/tokenization_xlm_prophetnet.py | # coding=utf-8
# Copyright 2020 The Microsoft Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import collections
import os
from shutil import copyfile
from typing import Any, Dict, List, Optional, Tuple
from ...tokenization_utils import PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
SPIECE_UNDERLINE = "▁"
VOCAB_FILES_NAMES = {"vocab_file": "prophetnet.tokenizer"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"microsoft/xprophetnet-large-wiki100-cased": (
"https://huggingface.co/microsoft/xprophetnet-large-wiki100-cased/resolve/main/prophetnet.tokenizer"
),
}
}
PRETRAINED_INIT_CONFIGURATION = {
"microsoft/xprophetnet-large-wiki100-cased": {"do_lower_case": False},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"microsoft/xprophetnet-large-wiki100-cased": 512,
}
def load_vocab(vocab_file):
"""Loads a vocabulary file into a dictionary."""
vocab = collections.OrderedDict()
with open(vocab_file, "r", encoding="utf-8") as reader:
tokens = reader.readlines()
for index, token in enumerate(tokens):
token = token.rstrip("\n")
vocab[token] = index
return vocab
class XLMProphetNetTokenizer(PreTrainedTokenizer):
"""
Adapted from [`RobertaTokenizer`] and [`XLNetTokenizer`]. Based on
[SentencePiece](https://github.com/google/sentencepiece).
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the end of sequence.
The token used is the `sep_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"<s>"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
mask_token (`str`, *optional*, defaults to `"<mask>"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
additional_special_tokens (`List[str]`, *optional*, defaults to `["<s>NOTUSED", "</s>NOTUSED"]`):
Additional special tokens used by the tokenizer.
sp_model_kwargs (`dict`, *optional*):
Will be passed to the `SentencePieceProcessor.__init__()` method. The [Python wrapper for
SentencePiece](https://github.com/google/sentencepiece/tree/master/python) can be used, among other things,
to set:
- `enable_sampling`: Enable subword regularization.
- `nbest_size`: Sampling parameters for unigram. Invalid for BPE-Dropout.
- `nbest_size = {0,1}`: No sampling is performed.
- `nbest_size > 1`: samples from the nbest_size results.
- `nbest_size < 0`: assuming that nbest_size is infinite and samples from the all hypothesis (lattice)
using forward-filtering-and-backward-sampling algorithm.
- `alpha`: Smoothing parameter for unigram sampling, and dropout probability of merge operations for
BPE-dropout.
Attributes:
sp_model (`SentencePieceProcessor`):
The *SentencePiece* processor that is used for every conversion (string, tokens and IDs).
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
bos_token="[SEP]",
eos_token="[SEP]",
sep_token="[SEP]",
unk_token="[UNK]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
sp_model_kwargs: Optional[Dict[str, Any]] = None,
**kwargs,
) -> None:
self.sp_model_kwargs = {} if sp_model_kwargs is None else sp_model_kwargs
super().__init__(
bos_token=bos_token,
eos_token=eos_token,
sep_token=sep_token,
unk_token=unk_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
sp_model_kwargs=self.sp_model_kwargs,
**kwargs,
)
try:
import sentencepiece as spm
except ImportError:
logger.warning(
"You need to install SentencePiece to use XLMRobertaTokenizer: https://github.com/google/sentencepiece"
" pip install sentencepiece"
)
raise
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(str(vocab_file))
self.vocab_file = vocab_file
# Original fairseq vocab and spm vocab must be "aligned":
# Vocab | 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9
# -------- | ------- | ------- | ------ | ------- | --- | --- | --- | ----- | ----- | ----
# fairseq | '<s>' | '<pad>' | '</s>' | '<unk>' | ',' | '.' | '▁' | 's' | '▁de' | '-'
# spm | '<unk>' | '<s>' | '</s>' | ',' | '.' | '▁' | 's' | '▁de' | '-' | '▁a'
# put special tokens and [unused] tokens into the vocab
self.fairseq_tokens_to_ids = {"[PAD]": 0, "[CLS]": 1, "[SEP]": 2, "[UNK]": 3, "[MASK]": 4}
for i in range(10):
tok = f"[unused{i}]"
self.fairseq_tokens_to_ids[tok] = 5 + i
# The first "real" token "," has position 15 in the embedding vocab and position 3 in the spm vocab
self.fairseq_offset = 12
self.fairseq_ids_to_tokens = {v: k for k, v in self.fairseq_tokens_to_ids.items()}
for k in self.fairseq_tokens_to_ids.keys():
self.unique_no_split_tokens.append(k)
def __getstate__(self):
state = self.__dict__.copy()
state["sp_model"] = None
return state
def __setstate__(self, d):
self.__dict__ = d
try:
import sentencepiece as spm
except ImportError:
logger.warning(
"You need to install SentencePiece to use XLMRobertaTokenizer: https://github.com/google/sentencepiece"
" pip install sentencepiece"
)
raise
# for backward compatibility
if not hasattr(self, "sp_model_kwargs"):
self.sp_model_kwargs = {}
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(self.vocab_file)
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return ([0] * len(token_ids_0)) + [1]
return ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. XLMProphetNet
does not make use of token type ids, therefore a list of zeros is returned.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of zeros.
"""
sep = [self.sep_token_id]
if token_ids_1 is None:
return len(token_ids_0 + sep) * [0]
return len(token_ids_0 + sep + sep + token_ids_1 + sep) * [0]
@property
def vocab_size(self):
return len(self.sp_model) + self.fairseq_offset
def get_vocab(self):
vocab = {self.convert_ids_to_tokens(i): i for i in range(self.vocab_size)}
vocab.update(self.added_tokens_encoder)
return vocab
def _tokenize(self, text: str) -> str:
return self.sp_model.encode(text, out_type=str)
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
if token in self.fairseq_tokens_to_ids:
return self.fairseq_tokens_to_ids[token]
spm_id = self.sp_model.PieceToId(token)
# Need to return unknown token if the SP model returned 0
return spm_id + self.fairseq_offset if spm_id else self.unk_token_id
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
if index in self.fairseq_ids_to_tokens:
return self.fairseq_ids_to_tokens[index]
return self.sp_model.IdToPiece(index - self.fairseq_offset)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (strings for sub-words) in a single string."""
out_string = "".join(tokens).replace(SPIECE_UNDERLINE, " ").strip()
return out_string
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file) and os.path.isfile(self.vocab_file):
copyfile(self.vocab_file, out_vocab_file)
elif not os.path.isfile(self.vocab_file):
with open(out_vocab_file, "wb") as fi:
content_spiece_model = self.sp_model.serialized_model_proto()
fi.write(content_spiece_model)
return (out_vocab_file,)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A XLMProphetNet sequence has the following format:
- single sequence: `X [SEP]`
- pair of sequences: `A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: list of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return token_ids_0 + [self.sep_token_id]
sep = [self.sep_token_id]
return token_ids_0 + sep + token_ids_1 + sep
|
233zzh/TitanDataOperationSystem | 1,583 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/baseAnalysis/function/UserInstallFunction.scala | package cn.edu.neu.titan.titanSpark.migration.baseAnalysis.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.{connectionProperties, currentDate, spark, tbCVJoin, url}
/**
* Created by IntelliJ IDEA.
*
* @Author: Wang Kuo
* @Email: 2383536228@qq.com
* @Date: 2020/7/13
* @Time: 14:33
* @Version: 1.0
* @Description: Description
*/
object UserInstallFunction {
def migrate(): Unit = {
// 源表与目标表
val tbSource = Constants.HIVE_TABLE_ADS_USR_DNU_CUBE
val tbTarget = Constants.MYSQL_TABLE_USER_INSTALLATION_DAY
val tbNew = "tbNew"
// 筛选表
val sql_select_start = "select " +
"case when version is NULL then '' else version end as version," +
"case when channel is NULL then '' else channel end as channel," +
s"dnu_num increase_num from $tbSource " +
s"where dt='$currentDate' and provinceid is NULL and model is NULL and os is NULL and resolution is NULL " +
"and carrier is NULL and network is NULL"
// 左外连接并转化name 为 id
val sql_join = s"select '$currentDate' installation_date, " +
"cid channel_id," +
"vid version_id," +
"case when increase_num is NULL then 0 else increase_num end as increase_num " +
s"from $tbCVJoin left join $tbNew " +
"on vname=version and cname=channel"
// 执行sql语句
spark.sql(sql_select_start).createOrReplaceTempView(tbNew)
spark.sql(sql_join).write.mode("append").jdbc(url, tbTarget, connectionProperties)
}
def main(args: Array[String]): Unit = {
migrate()
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,615 | src/transformers/models/xlm_prophetnet/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_sentencepiece_available, is_torch_available
_import_structure = {
"configuration_xlm_prophetnet": ["XLM_PROPHETNET_PRETRAINED_CONFIG_ARCHIVE_MAP", "XLMProphetNetConfig"],
}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_xlm_prophetnet"] = ["XLMProphetNetTokenizer"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_xlm_prophetnet"] = [
"XLM_PROPHETNET_PRETRAINED_MODEL_ARCHIVE_LIST",
"XLMProphetNetDecoder",
"XLMProphetNetEncoder",
"XLMProphetNetForCausalLM",
"XLMProphetNetForConditionalGeneration",
"XLMProphetNetModel",
"XLMProphetNetPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_xlm_prophetnet import XLM_PROPHETNET_PRETRAINED_CONFIG_ARCHIVE_MAP, XLMProphetNetConfig
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_xlm_prophetnet import XLMProphetNetTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_xlm_prophetnet import (
XLM_PROPHETNET_PRETRAINED_MODEL_ARCHIVE_LIST,
XLMProphetNetDecoder,
XLMProphetNetEncoder,
XLMProphetNetForCausalLM,
XLMProphetNetForConditionalGeneration,
XLMProphetNetModel,
XLMProphetNetPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
233zzh/TitanDataOperationSystem | 1,120 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/function/ParticipationDurationDay.scala | package cn.edu.neu.titan.titanSpark.migration.participation.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration._
import cn.edu.neu.titan.titanSpark.migration.participation._
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/19
* @Time: 22:19
* @Version: 1.0
* @Description: Description
*/
object ParticipationDurationDay {
def main(args: Array[String]): Unit = {
migrate()
}
def migrate(): Unit = {
val tbDurationRange = Constants.MYSQL_TABLE_DURATION_RANGE_DAY
val tbTarget = Constants.MYSQL_TABLE_BASE_PARTICIPATION_DURATION_DAY
val tbSource = Constants.HIVE_TABLE_ADS_FLW_DDURATION_CUBE
val dimName = "duration_range"
val colDurationCount = "duration_count"
val colUser = "user_num" //单日使用总时长在指定范围内的用户数
// 声明需要增加的列
val colSource = Array((tbSource, colDurationCount))
val colTarget = Array(colUser)
//时间
val dt = currentDate
// 执行迁移
executeMigrate2(dt, colSource, tbTarget, tbDurationRange, dimName, colTarget)
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 9,125 | src/transformers/models/xlm_prophetnet/configuration_xlm_prophetnet.py | # coding=utf-8
# Copyright 2020 The Microsoft Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" XLM-ProphetNet model configuration"""
from typing import Callable, Optional, Union
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
XLM_PROPHETNET_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"microsoft/xprophetnet-large-wiki100-cased": (
"https://huggingface.co/microsoft/xprophetnet-large-wiki100-cased/resolve/main/config.json"
),
}
class XLMProphetNetConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`XLMProphetNetModel`]. It is used to instantiate a
XLMProphetNet model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the XLMProphetNet
[microsoft/xprophetnet-large-wiki100-cased](https://huggingface.co/microsoft/xprophetnet-large-wiki100-cased)
architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
activation_dropout (`float`, *optional*, defaults to 0.1):
The dropout ratio for activations inside the fully connected layer.
activation_function (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the ProphetNET model. Defines the number of different tokens that can be represented by
the `inputs_ids` passed when calling [`XLMProphetNetModel`].
hidden_size (`int`, *optional*, defaults to 1024):
Dimensionality of the layers and the pooler layer.
encoder_ffn_dim (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often named feed-forward) layer in decoder.
num_encoder_layers (`int`, *optional*, defaults to 12):
Number of encoder layers.
num_encoder_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer encoder.
decoder_ffn_dim (`int`, *optional*, defaults to 4096):
Dimensionality of the `intermediate` (often named feed-forward) layer in decoder.
num_decoder_layers (`int`, *optional*, defaults to 12):
Number of decoder layers.
num_decoder_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer decoder.
attention_dropout (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
init_std (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
add_cross_attention (`bool`, *optional*, defaults to `True`):
Whether cross-attention layers should be added to the model.
is_encoder_decoder (`bool`, *optional*, defaults to `True`):
Whether this is an encoder/decoder model.
pad_token_id (`int`, *optional*, defaults to 1)
Padding token id.
bos_token_id (`int`, *optional*, defaults to 0)
Beginning of stream token id.
eos_token_id (`int`, *optional*, defaults to 2)
End of stream token id.
ngram (`int`, *optional*, defaults to 2)
Number of future tokens to predict. Set to 1 to be same as traditional Language model to predict next first
token.
num_buckets (`int`, *optional*, defaults to 32)
The number of buckets to use for each attention layer. This is for relative position calculation. See the
[T5 paper](see https://arxiv.org/abs/1910.10683) for more details.
relative_max_distance (`int`, *optional*, defaults to 128)
Relative distances greater than this number will be put into the last same bucket. This is for relative
position calculation. See the [T5 paper](see https://arxiv.org/abs/1910.10683) for more details.
disable_ngram_loss (`bool`, *optional*, defaults to `False`):
Whether be trained predicting only the next first token.
eps (`float`, *optional*, defaults to 0.0):
Controls the `epsilon` parameter value for label smoothing in the loss calculation. If set to 0, no label
smoothing is performed.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
"""
model_type = "xlm-prophetnet"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {
"num_attention_heads": "num_encoder_attention_heads",
}
def __init__(
self,
activation_dropout: Optional[float] = 0.1,
activation_function: Optional[Union[str, Callable]] = "gelu",
vocab_size: Optional[int] = 30522,
hidden_size: Optional[int] = 1024,
encoder_ffn_dim: Optional[int] = 4096,
num_encoder_layers: Optional[int] = 12,
num_encoder_attention_heads: Optional[int] = 16,
decoder_ffn_dim: Optional[int] = 4096,
num_decoder_layers: Optional[int] = 12,
num_decoder_attention_heads: Optional[int] = 16,
attention_dropout: Optional[float] = 0.1,
dropout: Optional[float] = 0.1,
max_position_embeddings: Optional[int] = 512,
init_std: Optional[float] = 0.02,
is_encoder_decoder: Optional[bool] = True,
add_cross_attention: Optional[bool] = True,
decoder_start_token_id: Optional[int] = 0,
ngram: Optional[int] = 2,
num_buckets: Optional[int] = 32,
relative_max_distance: Optional[int] = 128,
disable_ngram_loss: Optional[bool] = False,
eps: Optional[float] = 0.0,
use_cache: Optional[bool] = True,
pad_token_id: Optional[int] = 0,
bos_token_id: Optional[int] = 1,
eos_token_id: Optional[int] = 2,
**kwargs,
):
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.encoder_ffn_dim = encoder_ffn_dim
self.num_encoder_layers = num_encoder_layers
self.num_encoder_attention_heads = num_encoder_attention_heads
self.decoder_ffn_dim = decoder_ffn_dim
self.num_decoder_layers = num_decoder_layers
self.num_decoder_attention_heads = num_decoder_attention_heads
self.max_position_embeddings = max_position_embeddings
self.init_std = init_std # Normal(0, this parameter)
self.activation_function = activation_function
# parameters for xlmprophetnet
self.ngram = ngram
self.num_buckets = num_buckets
self.relative_max_distance = relative_max_distance
self.disable_ngram_loss = disable_ngram_loss
self.eps = eps
# 3 Types of Dropout
self.attention_dropout = attention_dropout
self.activation_dropout = activation_dropout
self.dropout = dropout
self.use_cache = use_cache
super().__init__(
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
is_encoder_decoder=is_encoder_decoder,
add_cross_attention=add_cross_attention,
decoder_start_token_id=decoder_start_token_id,
**kwargs,
)
@property
def num_hidden_layers(self) -> int:
return self.num_encoder_layers + self.num_decoder_layers
@num_hidden_layers.setter
def num_hidden_layers(self, value):
raise NotImplementedError(
"This model does not support the setting of `num_hidden_layers`. Please set `num_encoder_layers` and"
" `num_decoder_layers`."
)
|
233zzh/TitanDataOperationSystem | 1,121 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/function/ParticipationInterval.scala | package cn.edu.neu.titan.titanSpark.migration.participation.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.currentDate
import cn.edu.neu.titan.titanSpark.migration.participation.executeMigrate2
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/20
* @Time: 11:46
* @Version: 1.0
* @Description: Description
*/
object ParticipationInterval {
def main(args: Array[String]): Unit = {
migrate()
}
def migrate(): Unit = {
val tbDurationRange = Constants.MYSQL_TABLE_INTERVAL_RANGE
val tbTarget = Constants.MYSQL_TABLE_BASE_PARTICIPATION_INTERVAL
val tbSource = Constants.HIVE_TABLE_ADS_APL_USR_ITV
val dimName = "itv_days"
val colStartCount = "itv_count"
val colStart = "start_num" //到结束日期为止30天内启动间隔在指定范围内的启动次数
// 声明需要增加的列
val colSource = Array((tbSource, colStartCount))
val colTarget = Array(colStart)
//时间
val dt = currentDate
// 执行迁移
executeMigrate2(dt, colSource, tbTarget, tbDurationRange, dimName, colTarget)
}
}
|
233zzh/TitanDataOperationSystem | 1,135 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/function/ParticipationFrequencyDay.scala | package cn.edu.neu.titan.titanSpark.migration.participation.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.currentDate
import cn.edu.neu.titan.titanSpark.migration.participation.executeMigrate2
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/20
* @Time: 11:46
* @Version: 1.0
* @Description: Description
*/
object ParticipationFrequencyDay {
def main(args: Array[String]): Unit = {
migrate()
}
def migrate(): Unit = {
val tbDurationRange = Constants.MYSQL_TABLE_FREQUENCY_RANGE_DAY
val tbTarget = Constants.MYSQL_TABLE_BASE_PARTICIPATION_FREQUENCY_DAY
val tbSource = Constants.HIVE_TABLE_ADS_FLW_DSTART_CUBE
val dimName = "start_num_range"
val colStartCount = "start_count"
val colUser = "user_num" //单日使用总时长在指定范围内的用户数
// 声明需要增加的列
val colSource = Array((tbSource, colStartCount))
val colTarget = Array(colUser)
//时间
val dt = currentDate
// 执行迁移
executeMigrate2(dt, colSource, tbTarget, tbDurationRange, dimName, colTarget)
}
}
|
233zzh/TitanDataOperationSystem | 1,400 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/function/ParticipationFrequencyWeek.scala | package cn.edu.neu.titan.titanSpark.migration.participation.function
import cn.edu.neu.titan.titanSpark.analysis.flow.function.FlwWStartCubeFunction.flwWStartCubeFunction
import cn.edu.neu.titan.titanSpark.analysis.today
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.common.utils.DateUtils
import cn.edu.neu.titan.titanSpark.migration.currentWeek
import cn.edu.neu.titan.titanSpark.migration.participation.executeMigrate2
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/20
* @Time: 11:46
* @Version: 1.0
* @Description: Description
*/
object ParticipationFrequencyWeek {
def main(args: Array[String]): Unit = {
if(DateUtils.isFirstDayOfWeek(today)){
migrate()
}
}
def migrate(): Unit = {
val tbDurationRange = Constants.MYSQL_TABLE_FREQUENCY_RANGE_WEEK
val tbTarget = Constants.MYSQL_TABLE_BASE_PARTICIPATION_FREQUENCY_WEEK
val tbSource = Constants.HIVE_TABLE_ADS_FLW_WSTART_CUBE
val dimName = "start_num_range"
val colStartCount = "start_count"
val colUser = "user_num" //单日使用总时长在指定范围内的用户数
// 声明需要增加的列
val colSource = Array((tbSource, colStartCount))
val colTarget = Array(colUser)
//时间
val dt = currentWeek
// 执行迁移
executeMigrate2(dt, colSource, tbTarget, tbDurationRange, dimName, colTarget)
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 119,050 | src/transformers/models/xlm_prophetnet/modeling_xlm_prophetnet.py | # coding=utf-8
# Copyright 2020 The Microsoft Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch XLM-ProphetNet model."""
import copy
import math
import warnings
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import Tensor, nn
from torch.nn import LayerNorm
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput
from ...modeling_utils import PreTrainedModel
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_xlm_prophetnet import XLMProphetNetConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "XLMProphetNetConfig"
XLM_PROPHETNET_PRETRAINED_MODEL_ARCHIVE_LIST = [
"microsoft/xprophetnet-large-wiki100-cased",
# See all XLMProphetNet models at https://huggingface.co/models?filter=xprophetnet
]
# Copied from src.transformers.models.prophetnet.modeling_prophetnet.PROPHETNET_START_DOCSTRING with ProphetNetConfig->XLMProphetNetConfig
XLM_PROPHETNET_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
Original ProphetNet code can be found [here](https://github.com/microsoft/ProphetNet). Checkpoints were converted
from original Fairseq checkpoints. For more information on the checkpoint conversion, please take a look at the
file `convert_prophetnet_original_pytorch_checkpoint_to_pytorch.py`.
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matters related to general usage and
behavior.
Parameters:
config ([`XLMProphetNetConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
# Copied from src.transformers.models.prophetnet.modeling_prophetnet.PROPHETNET_INPUTS_DOCSTRING with ProphetNet->XLMProphetNet
XLM_PROPHETNET_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
XLMProphetNet uses the `eos_token_id` as the starting token for `decoder_input_ids` generation. If
`past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
decoder_attention_mask (`torch.BoolTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`tuple(tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)`, *optional*) is a sequence of
hidden-states at the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# Copied from src.transformers.models.prophetnet.modeling_prophetnet.PROPHETNET_STANDALONE_INPUTS_DOCSTRING with ProphetNet->XLMProphetNet
XLM_PROPHETNET_STANDALONE_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# Copied from transformers.models.prophetnet.modeling_prophetnet.softmax
def softmax(hidden_state, dim, onnx_trace=False):
if onnx_trace:
return nn.functional.softmax(hidden_state.float(), dim=dim)
else:
return nn.functional.softmax(hidden_state, dim=dim, dtype=torch.float32)
# Copied from transformers.models.prophetnet.modeling_prophetnet.ngram_attention_bias
def ngram_attention_bias(sequence_length, ngram, device, dtype):
"""
This function computes the bias for the predict stream
"""
left_block = (
torch.ones((ngram, sequence_length, sequence_length), device=device, dtype=dtype) * torch.finfo(dtype).min
)
right_block = left_block.detach().clone()
# create bias
for stream_idx in range(ngram):
right_block[stream_idx].fill_diagonal_(0, wrap=False)
left_block[stream_idx].triu_(-stream_idx + 1)
left_block[:, :, 0] = 0
return torch.cat([left_block, right_block], dim=2)
# Copied from transformers.models.prophetnet.modeling_prophetnet.compute_relative_buckets
def compute_relative_buckets(num_buckets, max_distance, relative_positions, is_bidirectional=False):
"""
This function computes individual parts of the relative position buckets. For more detail, see paper.
"""
inv_relative_positions = -relative_positions
rel_positions_bucket = 0
if is_bidirectional:
num_buckets = num_buckets // 2
rel_positions_bucket = (
rel_positions_bucket
+ torch.lt(inv_relative_positions, torch.zeros_like(inv_relative_positions)).int() * num_buckets
)
inv_relative_positions = torch.abs(inv_relative_positions)
else:
inv_relative_positions = torch.max(inv_relative_positions, torch.zeros_like(inv_relative_positions))
max_exact = num_buckets // 2
is_small = torch.lt(inv_relative_positions, max_exact)
val_if_large = max_exact + torch.log(inv_relative_positions.float() / max_exact) / math.log(
max_distance / max_exact
) * (num_buckets - max_exact)
val_if_large = torch.min(val_if_large, torch.ones_like(val_if_large) * (num_buckets - 1)).int()
rel_positions_bucket = rel_positions_bucket + torch.where(is_small, inv_relative_positions.int(), val_if_large)
return rel_positions_bucket
# Copied from transformers.models.prophetnet.modeling_prophetnet.compute_all_stream_relative_buckets
def compute_all_stream_relative_buckets(num_buckets, max_distance, position_ids):
"""
This function computes both main and predict relative position buckets. For more detail, see paper.
"""
# main stream
main_stream_relative_positions = position_ids.unsqueeze(1).repeat(1, position_ids.size(-1), 1)
main_stream_relative_positions = main_stream_relative_positions - position_ids.unsqueeze(-1)
# predicting stream
predicting_stream_relative_positions = torch.cat((position_ids - 1, position_ids), dim=-1).unsqueeze(1)
predicting_stream_relative_positions = predicting_stream_relative_positions.repeat(1, position_ids.size(-1), 1)
predicting_stream_relative_positions = predicting_stream_relative_positions - position_ids.unsqueeze(-1)
# get both position buckets
main_relative_position_buckets = compute_relative_buckets(
num_buckets, max_distance, main_stream_relative_positions, is_bidirectional=False
)
predict_relative_position_buckets = compute_relative_buckets(
num_buckets, max_distance, predicting_stream_relative_positions, is_bidirectional=False
)
return main_relative_position_buckets, predict_relative_position_buckets
@dataclass
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetSeq2SeqLMOutput with ProphetNet->XLMProphetNet all-casing
class XLMProphetNetSeq2SeqLMOutput(ModelOutput):
"""
Base class for sequence-to-sequence language models outputs.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss.
logits (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, config.vocab_size)`):
Prediction scores of the main stream language modeling head (scores for each vocabulary token before
SoftMax).
logits_ngram (`torch.FloatTensor` of shape `(batch_size, ngram * decoder_sequence_length, config.vocab_size)`):
Prediction scores of the predict stream language modeling head (scores for each vocabulary token before
SoftMax).
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
decoder_ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
decoder_ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the self-attention heads.
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, encoder_sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, encoder_sequence_length)`. Attentions weights of the encoder, after the attention
softmax, used to compute the weighted average in the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
logits_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@property
def decoder_cross_attentions(self):
warnings.warn(
"`decoder_cross_attentions` is deprecated and will be removed soon. Please use `cross_attentions`"
" instead.",
FutureWarning,
)
return self.cross_attentions
@dataclass
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetSeq2SeqModelOutput with ProphetNet->XLMProphetNet all-casing
class XLMProphetNetSeq2SeqModelOutput(ModelOutput):
"""
Base class for model encoder's outputs that also contains : pre-computed hidden states that can speed up sequential
decoding.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, hidden_size)`):
Sequence of main stream hidden-states at the output of the last layer of the decoder of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
last_hidden_state_ngram (`torch.FloatTensor` of shape `(batch_size,ngram * decoder_sequence_length, config.vocab_size)`, *optional*):
Sequence of predict stream hidden-states at the output of the last layer of the decoder of the model.
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
decoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
decoder_ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
decoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
decoder_ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
encoder_last_hidden_state (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder of the model.
encoder_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, encoder_sequence_length, hidden_size)`.
Hidden-states of the encoder at the output of each layer plus the initial embedding outputs.
encoder_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, encoder_sequence_length)`.
Attentions weights of the encoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
"""
last_hidden_state: torch.FloatTensor
last_hidden_state_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
decoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
decoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
decoder_ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
encoder_last_hidden_state: Optional[torch.FloatTensor] = None
encoder_hidden_states: Optional[Tuple[torch.FloatTensor]] = None
encoder_attentions: Optional[Tuple[torch.FloatTensor]] = None
@property
def decoder_cross_attentions(self):
warnings.warn(
"`decoder_cross_attentions` is deprecated and will be removed soon. Please use `cross_attentions`"
" instead.",
FutureWarning,
)
return self.cross_attentions
@dataclass
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetDecoderModelOutput with ProphetNet->XLMProphetNet all-casing
class XLMProphetNetDecoderModelOutput(ModelOutput):
"""
Base class for model's outputs that may also contain a past key/values (to speed up sequential decoding).
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, hidden_size)`):
Sequence of main stream hidden-states at the output of the last layer of the decoder of the model.
If `past_key_values` is used only the last hidden-state of the sequences of shape `(batch_size, 1,
hidden_size)` is output.
last_hidden_state_ngram (`torch.FloatTensor` of shape `(batch_size, ngram * decoder_sequence_length, config.vocab_size)`):
Sequence of predict stream hidden-states at the output of the last layer of the decoder of the model.
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
"""
last_hidden_state: torch.FloatTensor
last_hidden_state_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states_ngram: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetDecoderLMOutput with ProphetNet->XLMProphetNet all-casing
class XLMProphetNetDecoderLMOutput(ModelOutput):
"""
Base class for model's outputs that may also contain a past key/values (to speed up sequential decoding).
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Language modeling loss.
logits (`torch.FloatTensor` of shape `(batch_size, decoder_sequence_length, config.vocab_size)`):
Prediction scores of the main stream language modeling head (scores for each vocabulary token before
SoftMax).
logits_ngram (`torch.FloatTensor` of shape `(batch_size, ngram * decoder_sequence_length, config.vocab_size)`):
Prediction scores of the predict stream language modeling head (scores for each vocabulary token before
SoftMax).
past_key_values (`List[torch.FloatTensor]`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
List of `torch.FloatTensor` of length `config.n_layers`, with each tensor of shape `(2, batch_size,
num_attn_heads, decoder_sequence_length, embed_size_per_head)`).
Contains pre-computed hidden-states (key and values in the attention blocks) of the decoder that can be
used (see `past_key_values` input) to speed up sequential decoding.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, decoder_sequence_length, hidden_size)`.
Hidden-states of main stream of the decoder at the output of each layer plus the initial embedding outputs.
ngram_hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, ngram * decoder_sequence_length, hidden_size)`.
Hidden-states of the predict stream of the decoder at the output of each layer plus the initial embedding
outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the decoder, after the attention softmax, used to compute the weighted average in the
self-attention heads.
ngram_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
decoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the predict stream of the decoder, after the attention softmax, used to compute the
weighted average in the
cross_attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_attn_heads,
encoder_sequence_length, decoder_sequence_length)`.
Attentions weights of the cross-attention layer of the decoder, after the attention softmax, used to
compute the weighted average in the
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
logits_ngram: Optional[torch.FloatTensor] = None
past_key_values: Optional[Tuple[torch.FloatTensor]] = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
hidden_states_ngram: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
ngram_attentions: Optional[Tuple[torch.FloatTensor]] = None
cross_attentions: Optional[Tuple[torch.FloatTensor]] = None
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetPreTrainedModel with ProphetNet->XLMProphetNet
class XLMProphetNetPreTrainedModel(PreTrainedModel):
config_class = XLMProphetNetConfig
base_model_prefix = "prophetnet"
supports_gradient_checkpointing = True
def _init_weights(self, module):
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=self.config.init_std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.init_std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (XLMProphetNetDecoder, XLMProphetNetEncoder)):
module.gradient_checkpointing = value
def _shift_right(self, input_ids):
decoder_start_token_id = self.config.decoder_start_token_id
pad_token_id = self.config.pad_token_id
assert decoder_start_token_id is not None, (
"self.model.config.decoder_start_token_id has to be defined. In XLMProphetNet it is usually set to the"
" pad_token_id. See XLMProphetNet docs for more information"
)
# shift inputs to the right
shifted_input_ids = input_ids.new_zeros(input_ids.shape)
shifted_input_ids[..., 1:] = input_ids[..., :-1].clone()
shifted_input_ids[..., 0] = decoder_start_token_id
assert pad_token_id is not None, "self.model.config.pad_token_id has to be defined."
# replace possible -100 values in labels by `pad_token_id`
shifted_input_ids.masked_fill_(shifted_input_ids == -100, pad_token_id)
assert torch.all(shifted_input_ids >= 0).item(), "Verify that `shifted_input_ids` has only positive values"
return shifted_input_ids
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetPositionalEmbeddings with ProphetNet->XLMProphetNet
class XLMProphetNetPositionalEmbeddings(nn.Embedding):
"""
This module learns positional embeddings up to a fixed maximum size. Padding ids are ignored by either offsetting
based on padding_idx or by setting padding_idx to None and ensuring that the appropriate position ids are passed to
the forward function.
"""
def __init__(self, config: XLMProphetNetConfig) -> None:
self.max_length = config.max_position_embeddings
super().__init__(config.max_position_embeddings, config.hidden_size, config.pad_token_id)
def forward(self, inputs_shape, device, attention_mask=None, past_key_values=None, position_ids=None):
assert (position_ids is None) or (
self.padding_idx is None
), "If position_ids is pre-computed then padding_idx should not be set."
if position_ids is None:
if past_key_values is not None:
# position_ids is the same for every token when decoding a single step
# Without the int() cast, it doesn't work in some cases when exporting to ONNX
prev_num_input_ids = past_key_values[0][0].shape[2]
num_input_ids = inputs_shape[1] + prev_num_input_ids
position_ids = torch.ones((1, 1), dtype=torch.long, device=device) * (
int(self.padding_idx + num_input_ids)
)
else:
if attention_mask is None:
attention_mask = torch.ones(inputs_shape, dtype=torch.long, device=device)
# retrieve position_ids from input_ids / attention_mask
position_ids = (
torch.cumsum(attention_mask, dim=1).type_as(attention_mask) * attention_mask
).long() + self.padding_idx
# make sure position_ids are not bigger then max_length
position_ids = position_ids.clamp(0, self.max_length - 1)
return super().forward(position_ids), position_ids
def _forward(self, position_ids):
return super().forward(position_ids)
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetAttention with ProphetNet->XLMProphetNet
class XLMProphetNetAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
config: XLMProphetNetConfig,
num_attn_heads: int,
):
super().__init__()
hidden_size = config.hidden_size
self.attention_dropout = config.attention_dropout
self.dropout = config.dropout
self.num_attn_heads = num_attn_heads
self.head_dim = hidden_size // num_attn_heads
assert self.head_dim * num_attn_heads == hidden_size, (
"`config.hidden_size` must be divisible by `config.num_encoder_attention_heads` and"
" `config.num_decoder_attention_heads`"
)
self.key_proj = nn.Linear(hidden_size, hidden_size)
self.value_proj = nn.Linear(hidden_size, hidden_size)
self.query_proj = nn.Linear(hidden_size, hidden_size)
self.out_proj = nn.Linear(hidden_size, hidden_size)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_attn_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states,
key_value_states: Optional[Tensor] = None,
attention_mask: Optional[Tensor] = None,
layer_head_mask: Optional[Tensor] = None,
past_key_value: Optional[Tuple[Tensor]] = None,
output_attentions: bool = False,
) -> Tuple[Tensor, Optional[Tensor]]:
batch_size, tgt_len, hidden_size = hidden_states.size()
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
assert list(hidden_states.size()) == [
batch_size,
tgt_len,
hidden_size,
], f"Size of hidden states should be {batch_size, tgt_len, hidden_size}, but is {hidden_states.size()}"
# previous time steps are cached - no need to recompute key and value if they are static
query_states = self.query_proj(hidden_states) / (self.head_dim**0.5)
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.key_proj(key_value_states), -1, batch_size)
value_states = self._shape(self.value_proj(key_value_states), -1, batch_size)
else:
# self_attention
key_states = self._shape(self.key_proj(hidden_states), -1, batch_size)
value_states = self._shape(self.value_proj(hidden_states), -1, batch_size)
if is_cross_attention:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
# project states into the correct shape
proj_shape = (batch_size, self.num_attn_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, batch_size).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(2)
attn_weights = torch.einsum("bsij,bsjk->bsik", query_states, key_states.transpose(2, 3))
expected_shape = (batch_size, self.num_attn_heads, tgt_len, src_len)
if attn_weights.size() != expected_shape:
raise ValueError(f"Attention weights should have size {expected_shape}, but is {attn_weights.size()}")
# This is part of a workaround to get around fork/join parallelism not supporting Optional types.
if attention_mask is not None and attention_mask.dim() == 0:
attention_mask = None
expected_shape = (batch_size, self.num_attn_heads, 1, src_len)
if attention_mask is not None and attention_mask.size() != expected_shape:
raise ValueError(f"Attention mask should have size {expected_shape}, but is {attention_mask.size()}")
if attention_mask is not None: # don't attend to padding symbols
attn_weights = attn_weights + attention_mask
if output_attentions:
attn_weights_reshaped = attn_weights
else:
attn_weights_reshaped = None
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
assert layer_head_mask.size() == (self.num_attn_heads,), (
f"Head mask for a single layer should be of size {(self.num_attn_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(
batch_size, self.num_attn_heads, tgt_len, src_len
)
# apply head_mask also on attn_weights_reshaped which is used for n-gram attention inside the model
attn_weights_reshaped = layer_head_mask.view(1, -1, 1, 1) * attn_weights_reshaped
attn_probs = nn.functional.dropout(
attn_weights,
p=self.attention_dropout,
training=self.training,
)
attn_output = torch.einsum("bsij,bsjk->bsik", attn_probs, value_states)
expected_shape = (batch_size, self.num_attn_heads, tgt_len, self.head_dim)
if attn_output.size() != expected_shape:
raise ValueError(f"`attn_output` should have shape {expected_shape}, but is of shape {attn_output.size()}")
attn_output = attn_output.transpose(1, 2).reshape(batch_size, tgt_len, hidden_size)
attn_output = self.out_proj(attn_output)
attn_output = nn.functional.dropout(attn_output, p=self.dropout, training=self.training)
return attn_output, attn_weights_reshaped, past_key_value
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetFeedForward with ProphetNet->XLMProphetNet
class XLMProphetNetFeedForward(nn.Module):
"""
This is the residual two feed-forward layer block based on the original Transformer implementation.
"""
def __init__(self, config: XLMProphetNetConfig, ffn_dim: int):
super().__init__()
self.activation_fn = ACT2FN[config.activation_function]
self.intermediate = nn.Linear(config.hidden_size, ffn_dim)
self.output = nn.Linear(ffn_dim, config.hidden_size)
self.activation_dropout = config.activation_dropout
self.dropout = config.dropout
def forward(self, hidden_states):
hidden_states = self.intermediate(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.output(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
return hidden_states
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetNgramSelfAttention with ProphetNet->XLMProphetNet
class XLMProphetNetNgramSelfAttention(nn.Module):
def __init__(self, config: XLMProphetNetConfig):
super().__init__()
self.hidden_size = config.hidden_size
self.num_buckets = config.num_buckets
self.relative_max_distance = config.relative_max_distance
self.num_attn_heads = config.num_decoder_attention_heads
self.dropout = config.dropout
self.attention_dropout = config.attention_dropout
self.head_dim = config.hidden_size // self.num_attn_heads
self.ngram = config.ngram
assert (
self.head_dim * self.num_attn_heads == config.hidden_size
), "config.hidden_size must be divisible by num_attn_heads"
# key, value, query projection
self.key_proj = nn.Linear(config.hidden_size, config.hidden_size)
self.value_proj = nn.Linear(config.hidden_size, config.hidden_size)
self.query_proj = nn.Linear(config.hidden_size, config.hidden_size)
# out projection
self.out_proj = nn.Linear(config.hidden_size, config.hidden_size)
# rel position embeddings
self.relative_pos_embeddings = nn.Linear(config.hidden_size, self.num_buckets * self.num_attn_heads)
# for onnx runtime
self.onnx_trace = False
def _shape(self, tensor, seq_len, batch_size):
return tensor.view(batch_size, seq_len, self.num_attn_heads, self.head_dim).transpose(1, 2).contiguous()
def prepare_for_onnx_export_(self):
self.onnx_trace = True
def forward(
self,
hidden_states,
past_key_value: Optional[Tuple[Tensor]] = None,
attention_mask=None,
layer_head_mask=None,
extended_predict_attention_mask=None,
main_relative_position_buckets=None,
predict_relative_position_buckets=None,
position_ids=None,
):
batch_size, ngram_sequence_length, hidden_size = hidden_states.size()
assert list(hidden_states.size()) == [batch_size, ngram_sequence_length, hidden_size], (
f"`hidden_states` should be of shape {batch_size, ngram_sequence_length, hidden_size}, but is of shape"
f" {hidden_states.shape}"
)
# project
query_states = self.query_proj(hidden_states)
key_states = self.key_proj(hidden_states)
value_states = self.value_proj(hidden_states)
# normalize
query_states = query_states / (self.head_dim**0.5)
# reshape
query_states = self._shape(query_states, ngram_sequence_length, batch_size)
key_states = self._shape(key_states, -1, batch_size)
value_states = self._shape(value_states, -1, batch_size)
proj_shape = (batch_size, self.num_attn_heads, -1, self.head_dim)
query_states = query_states.view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
# chunk into main stream and predict stream
hidden_states_list = hidden_states.chunk(1 + self.ngram, dim=1)
query_states_list = query_states.chunk(1 + self.ngram, dim=2)
key_states_list = key_states.chunk(1 + self.ngram, dim=2)
value_states_list = value_states.chunk(1 + self.ngram, dim=2)
main_hidden_states, hidden_states_predict_list = hidden_states_list[0], hidden_states_list[1:]
main_query_states, predict_query_states_list = query_states_list[0], query_states_list[1:]
main_key_states, predict_key_states_list = key_states_list[0], key_states_list[1:]
main_value_states, predict_value_states_list = value_states_list[0], value_states_list[1:]
# saved states are stored with shape (batch_size, num_attn_heads, seq_len, head_dim)
if past_key_value is not None:
prev_main_key_states = past_key_value[0]
main_key_states = torch.cat((prev_main_key_states, main_key_states), dim=2)
prev_main_value_states = past_key_value[1]
main_value_states = torch.cat((prev_main_value_states, main_value_states), dim=2)
# Update cache
past_key_value = (main_key_states, main_value_states)
# get seq_length of main stream only
sequence_length = ngram_sequence_length // (1 + self.ngram)
# MAIN-STREAM
# main attn weights
# [batch_size, number_heads, sequence_length, head_dimesion]
# x [batch_size, number_heads, head_dimesion, sequence_length]
# -> [batch_size, number_heads, sequence_length, sequence_length]
main_attn_weights = torch.einsum("bntc,bncs->bnts", main_query_states, main_key_states.transpose(2, 3))
# retrieve relative position embeddings for each layer -> see paper for more details
main_relative_pos_embeddings = self.get_main_relative_pos_embeddings(
main_hidden_states, main_attn_weights, position_ids, main_relative_position_buckets
)
main_attn_weights = main_attn_weights + main_relative_pos_embeddings
if attention_mask is not None:
main_attn_weights = main_attn_weights + attention_mask
main_attn_probs = softmax(
main_attn_weights,
dim=-1,
onnx_trace=self.onnx_trace,
).type_as(main_attn_weights)
if layer_head_mask is not None:
assert layer_head_mask.size() == (self.num_attn_heads,), (
f"Head mask for a single layer should be of size {(self.num_attn_heads,)}, but is"
f" {layer_head_mask.size()}"
)
main_attn_probs = layer_head_mask.view(1, -1, 1, 1) * main_attn_probs.view(
batch_size, self.num_attn_heads, -1, sequence_length
)
main_attn_probs = nn.functional.dropout(main_attn_probs, p=self.attention_dropout, training=self.training)
# project to attn_output
# [batch_size, number_heads, sequence_length, sequence_length]
# x [batch_size, number_heads, sequence_length, head_dimesion]
# -> [batch_size, number_heads, sequence_length, head_dimesion]
main_attn_output = torch.einsum("bntc,bncs->bnts", main_attn_probs, main_value_states)
# reshape so that num_heads dim is merged into last `head_dim` axis
main_attn_output = main_attn_output.transpose(1, 2).reshape(batch_size, 1, sequence_length, hidden_size)
main_attn_output = self.out_proj(main_attn_output)
# PREDICT-STREAM
# [batch_size, ngram, number_heads, sequence_length, head_dimesion]
predict_query_states = torch.stack(predict_query_states_list, 1).view(
batch_size, self.ngram, self.num_attn_heads, sequence_length, self.head_dim
)
# [batch_size, ngram, number_heads, 2*sequence_length, head_dimesion]
predict_key_states = torch.stack([torch.cat([main_key_states, key], 2) for key in predict_key_states_list], 1)
# [batch_size, sequence_length, ngram, hidden_size]
predict_hidden_states = torch.stack(hidden_states_predict_list, dim=2)
# [batch_size, number_heads, ngram, 2*sequence_length, head_dimesion]
predict_value_states = torch.cat(
[torch.cat([main_value_states, v_p], 2).unsqueeze(2) for v_p in predict_value_states_list], 2
)
# [batch_size, ngram, number_heads, sequence_length, head_dimesion]
# x [batch_size, ngram, number_heads, 2*sequence_length, head_dimesion]
# -> [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
predict_attn_weights = torch.einsum("bnhtc,bnhsc->bnhts", (predict_query_states, predict_key_states))
# retrieve relative position embeddings for each layer -> see paper for more details
# [batch_size, ngram, number_heads, sequence_length, predict_relative_pos_embeddings]
predict_relative_pos_embeddings = self.get_predict_relative_pos_embeddings(
predict_hidden_states, predict_attn_weights, position_ids, predict_relative_position_buckets
)
# [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
predict_attn_weights = predict_attn_weights + predict_relative_pos_embeddings
if extended_predict_attention_mask is not None:
# Permuting Predict attention mask to [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
extended_predict_attention_mask = extended_predict_attention_mask.permute(0, 2, 1, 3, 4)
extended_predict_attention_mask = extended_predict_attention_mask.to(predict_attn_weights.dtype)
predict_attn_weights = predict_attn_weights + extended_predict_attention_mask
predict_attn_probs = softmax(
predict_attn_weights,
dim=-1,
onnx_trace=self.onnx_trace,
).type_as(predict_attn_weights)
if layer_head_mask is not None:
assert layer_head_mask.size() == (self.num_attn_heads,), (
f"Head mask for a single layer should be of size {(self.num_attn_heads,)}, but is"
f" {layer_head_mask.size()}"
)
predict_attn_probs = layer_head_mask.view(1, 1, -1, 1, 1) * predict_attn_probs
predict_attn_probs = nn.functional.dropout(
predict_attn_probs, p=self.attention_dropout, training=self.training
)
# project to attention output
# [batch_size, ngram, number_heads, sequence_length, 2*sequence_length]
# x [batch_size, ngram, number_heads, 2*sequence_length, head_dimesion]
# -> [batch_size, ngram, number_heads, sequence_length, head_dimesion]
predict_attn_output = torch.einsum(
"bnhts,bnhsc->bnhtc", (predict_attn_probs, predict_value_states.transpose(1, 2))
)
# reshape so that num_heads dim is merged into last `head_dim` axis
# [batch_size, ngram, number_heads, sequence_length, head_dimesion] -> [batch_size, ngram, sequence_length, hidden_size]
predict_attn_output = predict_attn_output.transpose(2, 3)
predict_attn_output = predict_attn_output.reshape(batch_size, self.ngram, sequence_length, hidden_size)
predict_attn_output = self.out_proj(predict_attn_output)
# concat to single attn output
# [batch_size, (1+ngram)*sequence_length, hidden_size]
attn_output = torch.cat([main_attn_output, predict_attn_output], 1).view(batch_size, -1, hidden_size)
# reshape into better form for `config.output_attentions`
main_attn_probs = main_attn_probs.view(batch_size, self.num_attn_heads, sequence_length, -1)
attn_output = nn.functional.dropout(attn_output, p=self.dropout, training=self.training)
return attn_output, main_attn_probs, predict_attn_probs, past_key_value
def get_main_relative_pos_embeddings(
self, hidden_states, attn_weights, position_ids, main_relative_position_buckets
):
# input hidden_states [batch_size, sequence_length, hidden_size]
# input attn_weights [batch_size, num_heads, sequence_length, sequence_length]
# input position_ids [batch_size, sequence_length] or [1,1]
batch_size, num_attn_heads, tgt_len, src_len = attn_weights.shape
attn_weights = attn_weights.view(batch_size, num_attn_heads, tgt_len, src_len)
if main_relative_position_buckets is None:
batch_size, sequence_length = hidden_states.shape[:2]
relative_positions = (
torch.arange(1, attn_weights.shape[-1] + 1)
.unsqueeze(0)
.unsqueeze(0)
.repeat(batch_size, sequence_length, 1)
.to(position_ids.device)
)
# [batch_size, sequence_length, sequence_length+1]
relative_positions = relative_positions - position_ids.unsqueeze(0).repeat(batch_size, sequence_length, 1)
main_relative_position_buckets = compute_relative_buckets(
self.num_buckets, self.relative_max_distance, relative_positions, False
)
# [batch_size, sequence_length, num_buckets * num_heads]
rel_pos_embeddings = self.relative_pos_embeddings(hidden_states)
rel_pos_embeddings = rel_pos_embeddings.view(
rel_pos_embeddings.shape[:2] + (self.num_buckets, self.num_attn_heads)
)
rel_pos_embeddings = rel_pos_embeddings.permute(0, 3, 1, 2)
# [batch_size, num_heads, sequence_length, num_buckets]
rel_pos_embeddings = rel_pos_embeddings.reshape(attn_weights.shape[:3] + (-1,))
main_relative_position_buckets = main_relative_position_buckets.repeat(1, self.num_attn_heads, 1)
# [batch_size * num_heads * sequence_length, sequence_length]
main_relative_position_buckets = main_relative_position_buckets.view(
-1, main_relative_position_buckets.shape[-1]
)
main_relative_position_buckets = main_relative_position_buckets.long()
# [batch_size * num_heads * sequence_length, sequence_length]
rel_pos_embeddings = rel_pos_embeddings.reshape(-1, rel_pos_embeddings.size(-1))
main_relative_pos_embeddings = torch.gather(rel_pos_embeddings, dim=1, index=main_relative_position_buckets)
main_relative_pos_embeddings = main_relative_pos_embeddings.view(batch_size, num_attn_heads, tgt_len, -1)
return main_relative_pos_embeddings
def get_predict_relative_pos_embeddings(
self, hidden_states, attn_weights, position_ids, predict_relative_position_buckets
):
# input hidden_states [batch_size, sequence_length, ngram, hidden_size]
# input attn_weights [batch_size, ngram, num_heads, sequence_length, 2*sequence_length]
# input position_ids [batch_size, sequence_length] or [1,1]
# input predict_relative_position_buckets [batch_size, sequence_length, 2*sequence_length] or None
batch_size, sequence_length = hidden_states.shape[0:2]
if predict_relative_position_buckets is None:
key_sequence_length = attn_weights.shape[-1]
assert (
position_ids[0][0] == key_sequence_length - 1
), "`position_ids` are incorrect. They should be of the format 1 2 3 4 5 ... (key_sequence_length - 1)"
relative_positions = (
torch.arange(0, key_sequence_length)
.unsqueeze(0)
.unsqueeze(0)
.repeat(batch_size, sequence_length, 1)
.to(position_ids.device)
)
relative_positions = relative_positions - position_ids.unsqueeze(0).repeat(batch_size, sequence_length, 1)
predict_relative_position_buckets = compute_relative_buckets(
self.num_buckets, self.relative_max_distance, relative_positions, False
)
# [batch_size, ngram, sequence_length, hidden_size]
hidden_states = hidden_states.transpose(1, 2)
rel_pos_embeddings = self.relative_pos_embeddings(hidden_states)
# [batch_size, ngram, sequence_length, num_buckets, num_heads]
rel_pos_embeddings = rel_pos_embeddings.view(
hidden_states.shape[:-1] + (self.num_buckets, self.num_attn_heads)
)
rel_pos_embeddings = rel_pos_embeddings.permute(0, 2, 1, 4, 3)
# [batch_size * ngram * sequence_length * num_heads, num_buckets]
rel_pos_embeddings = rel_pos_embeddings.reshape(-1, self.num_buckets)
# [ngram, batch_size, num_heads * sequence_length, -1]
predict_relative_position_buckets = predict_relative_position_buckets.unsqueeze(0)
predict_relative_position_buckets = predict_relative_position_buckets.repeat(
self.ngram, 1, self.num_attn_heads, 1
)
# [ngram * batch_size * num_heads * sequence_length, -1]
predict_relative_position_buckets = predict_relative_position_buckets.view(
-1, predict_relative_position_buckets.size(-1)
).long()
predict_relative_pos_embeddings = torch.gather(
rel_pos_embeddings, dim=1, index=predict_relative_position_buckets
)
# [batch_size, gram, num_heads, sequence_length, -1]
predict_relative_pos_embeddings = predict_relative_pos_embeddings.view(
batch_size, self.ngram, self.num_attn_heads, sequence_length, -1
)
return predict_relative_pos_embeddings
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetEncoderLayer with ProphetNet->XLMProphetNet, Prophetnet->XLMProphetnet
class XLMProphetNetEncoderLayer(nn.Module):
"""
Encoder block for XLMProphetnet
"""
def __init__(self, config: XLMProphetNetConfig):
super().__init__()
# 1st residual block
self.self_attn = XLMProphetNetAttention(config, config.num_encoder_attention_heads)
self.self_attn_layer_norm = LayerNorm(config.hidden_size)
# 2nd residual block
self.feed_forward = XLMProphetNetFeedForward(config, config.encoder_ffn_dim)
self.feed_forward_layer_norm = LayerNorm(config.hidden_size)
def forward(
self,
hidden_states,
attention_mask,
layer_head_mask,
output_attentions: bool = False,
):
# 1st residual block
attention_output, attn_weights, _ = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = self.self_attn_layer_norm(attention_output + hidden_states)
# 2nd residual block
feed_forward_output = self.feed_forward(hidden_states)
hidden_states = self.feed_forward_layer_norm(feed_forward_output + hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetDecoderLayer with Prophetnet->XLMProphetnet, ProphetNet->XLMProphetNet
class XLMProphetNetDecoderLayer(nn.Module):
"""
Decoder block for XLMProphetnet
"""
def __init__(self, config: XLMProphetNetConfig):
super().__init__()
# 1st residual block
self.self_attn = XLMProphetNetNgramSelfAttention(config)
self.self_attn_layer_norm = LayerNorm(config.hidden_size)
# 2nd residual block
if config.add_cross_attention:
self.cross_attn = XLMProphetNetAttention(config, config.num_decoder_attention_heads)
self.cross_attn_layer_norm = LayerNorm(config.hidden_size)
# 3rd residual block
self.feed_forward = XLMProphetNetFeedForward(config, config.decoder_ffn_dim)
self.feed_forward_layer_norm = LayerNorm(config.hidden_size)
def forward(
self,
hidden_states,
attention_mask=None,
encoder_hidden_states=None,
encoder_attn_mask=None,
layer_head_mask=None,
cross_attn_layer_head_mask=None,
extended_predict_attention_mask=None,
main_relative_position_buckets=None,
predict_relative_position_buckets=None,
position_ids=None,
past_key_value=None,
use_cache: bool = True,
output_attentions: bool = False,
):
# 1st residual block
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
ngram_attention_output, self_attn_weights, self_attn_weights_ngram, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
extended_predict_attention_mask=extended_predict_attention_mask,
main_relative_position_buckets=main_relative_position_buckets,
predict_relative_position_buckets=predict_relative_position_buckets,
position_ids=position_ids,
)
hidden_states = self.self_attn_layer_norm(hidden_states + ngram_attention_output)
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attn_weights = None
if encoder_hidden_states is not None:
# 2nd residual block
attention_output, cross_attn_weights, cross_attn_present_key_value = self.cross_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attn_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
)
hidden_states = self.cross_attn_layer_norm(attention_output + hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# 3rd residual block
feed_forward_output = self.feed_forward(hidden_states)
hidden_states = self.feed_forward_layer_norm(feed_forward_output + hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, self_attn_weights_ngram, cross_attn_weights)
if use_cache:
outputs += (present_key_value,)
return outputs
@add_start_docstrings(
"The standalone encoder part of the XLMProphetNetModel.",
XLM_PROPHETNET_START_DOCSTRING,
)
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetEncoder with microsoft/prophetnet-large-uncased->patrickvonplaten/xprophetnet-large-uncased-standalone, ProphetNet->XLMProphetNet, PROPHETNET->XLM_PROPHETNET
class XLMProphetNetEncoder(XLMProphetNetPreTrainedModel):
r"""
word_embeddings (`torch.nn.Embeddings` of shape `(config.vocab_size, config.hidden_size)`, *optional*):
The word embedding parameters. This can be used to initialize [`XLMProphetNetEncoder`] with pre-defined word
embeddings instead of randomly initialized word embeddings.
"""
def __init__(self, config: XLMProphetNetConfig, word_embeddings: nn.Embedding = None):
super().__init__(config)
self.word_embeddings = (
word_embeddings
if word_embeddings is not None
else nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
)
self.position_embeddings = XLMProphetNetPositionalEmbeddings(config)
self.embeddings_layer_norm = LayerNorm(config.hidden_size)
self.layers = nn.ModuleList([XLMProphetNetEncoderLayer(config) for _ in range(config.num_encoder_layers)])
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.word_embeddings
def set_input_embeddings(self, value):
self.word_embeddings = value
@add_start_docstrings_to_model_forward(XLM_PROPHETNET_STANDALONE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, XLMProphetNetEncoder
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> model = XLMProphetNetEncoder.from_pretrained("patrickvonplaten/prophetnet-large-uncased-standalone")
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is None and inputs_embeds is None:
raise ValueError("Either input_ids or inputs_embeds has to be passed.")
elif input_ids is not None and inputs_embeds is not None:
raise ValueError("Make sure to only pass input_ids or inputs_embeds.")
elif input_ids is not None and inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
# prepare attention mask
if attention_mask is not None:
extended_attention_mask = (
1.0 - attention_mask[:, None, None, :].repeat(1, self.config.num_encoder_attention_heads, 1, 1)
) * torch.finfo(self.dtype).min
extended_attention_mask = extended_attention_mask.to(inputs_embeds.dtype)
else:
extended_attention_mask = None
position_embeddings, position_ids = self.position_embeddings(inputs_embeds.shape[:2], inputs_embeds.device)
hidden_states = inputs_embeds + position_embeddings
hidden_states = self.embeddings_layer_norm(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.config.dropout, training=self.training)
encoder_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
assert head_mask.size()[0] == (
len(self.layers)
), f"The head_mask should be specified for {len(self.layers)} layers, but it is for {head_mask.size()[0]}."
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_hidden_states = encoder_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
extended_attention_mask,
(head_mask[idx] if head_mask is not None else None),
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask=extended_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_hidden_states = encoder_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_hidden_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_hidden_states, attentions=all_attentions
)
@add_start_docstrings(
"The standalone decoder part of the XLMProphetNetModel.",
XLM_PROPHETNET_START_DOCSTRING,
)
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetDecoder with microsoft/prophetnet-large-uncased->patrickvonplaten/xprophetnet-large-uncased-standalone, ProphetNet->XLMProphetNet, PROPHETNET->XLM_PROPHETNET,
class XLMProphetNetDecoder(XLMProphetNetPreTrainedModel):
r"""
word_embeddings (`torch.nn.Embeddings` of shape `(config.vocab_size, config.hidden_size)`, *optional*):
The word embedding parameters. This can be used to initialize [`XLMProphetNetEncoder`] with pre-defined word
embeddings instead of randomly initialized word embeddings.
"""
def __init__(self, config: XLMProphetNetConfig, word_embeddings: Optional[nn.Embedding] = None):
super().__init__(config)
self.ngram = config.ngram
self.num_buckets = config.num_buckets
self.relative_max_distance = config.relative_max_distance
self.dropout = config.dropout
self.max_target_positions = config.max_position_embeddings
self.word_embeddings = (
word_embeddings
if word_embeddings is not None
else nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
)
self.position_embeddings = XLMProphetNetPositionalEmbeddings(config)
self.ngram_embeddings = nn.Embedding(self.ngram, config.hidden_size, None)
self.layers = nn.ModuleList([XLMProphetNetDecoderLayer(config) for _ in range(config.num_decoder_layers)])
self.embeddings_layer_norm = LayerNorm(config.hidden_size)
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.word_embeddings
def set_input_embeddings(self, value):
self.word_embeddings = value
@add_start_docstrings_to_model_forward(XLM_PROPHETNET_STANDALONE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=XLMProphetNetDecoderModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, XLMProphetNetDecoderModelOutput]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, XLMProphetNetDecoder
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> model = XLMProphetNetDecoder.from_pretrained(
... "patrickvonplaten/xprophetnet-large-uncased-standalone", add_cross_attention=False
... )
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is None and inputs_embeds is None:
raise ValueError("Either `decoder_input_ids` or `decoder_inputs_embeds` has to be passed.")
elif input_ids is not None and inputs_embeds is not None:
raise ValueError("Make sure to only pass `decoder_input_ids` or `decoder_inputs_embeds`.")
elif input_ids is not None and inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
batch_size, sequence_length = inputs_embeds.shape[:2]
main_stream_pos_embed, position_ids = self.position_embeddings(
(batch_size, sequence_length),
device=inputs_embeds.device,
past_key_values=past_key_values,
)
if past_key_values is not None:
main_relative_position_buckets, predict_relative_position_buckets = None, None
else:
(
main_relative_position_buckets,
predict_relative_position_buckets,
) = self.compute_buffered_relative_buckets(position_ids)
predicting_stream_pos_embed = self.position_embeddings._forward(position_ids + 1)
# add position embeddings
hidden_states = inputs_embeds + main_stream_pos_embed
ngram_embeddings = self.ngram_embeddings.weight
# prepare attention mask
if past_key_values is not None:
assert (
hidden_states.size(1) == 1
), "At the moment `use_cache` is only supported for `decoder_input_ids` of length 1"
ngram_hidden_states = [
(ngram_embeddings[ngram - 1] + predicting_stream_pos_embed).repeat(batch_size, 1, 1)
for ngram in range(self.ngram)
]
extended_attention_mask = None
extended_predict_attention_mask = None
else:
ngram_hidden_states = [
(ngram_embeddings[ngram - 1] + predicting_stream_pos_embed) for ngram in range(self.ngram)
]
extended_attention_mask = self.prepare_attention_mask(hidden_states, attention_mask)
extended_predict_attention_mask = self.prepare_predict_attention_mask(hidden_states, attention_mask)
# prepare encoder attention mask
if encoder_attention_mask is not None:
extended_encoder_attention_mask = (
1.0 - encoder_attention_mask[:, None, None, :].repeat(1, self.config.num_decoder_attention_heads, 1, 1)
) * torch.finfo(self.dtype).min
extended_encoder_attention_mask = extended_encoder_attention_mask.to(inputs_embeds.dtype)
else:
extended_encoder_attention_mask = None
hidden_states = torch.cat([hidden_states] + ngram_hidden_states, 1)
if self.embeddings_layer_norm:
hidden_states = self.embeddings_layer_norm(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# init attentions, hidden_states and cache with empty tuples
all_main_stream_hidden_states = () if output_hidden_states else None
all_ngram_stream_hidden_states = () if output_hidden_states and self.config.ngram > 0 else None
all_main_stream_attns = () if output_attentions else None
all_ngram_stream_attns = () if output_attentions else None
all_cross_attns = () if output_attentions and self.config.add_cross_attention else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
present_key_values = () if use_cache else None
# check if head_mask/cross_attn_head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
assert attn_mask.size()[0] == (len(self.layers)), (
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
if output_hidden_states:
# grad cannot be kept because tensor is sliced
all_main_stream_hidden_states += (hidden_states[:, :sequence_length],)
if self.config.ngram > 0:
all_ngram_stream_hidden_states += (hidden_states[:, sequence_length:],)
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, use_cache, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
extended_attention_mask,
encoder_hidden_states,
extended_encoder_attention_mask,
(head_mask[idx] if head_mask is not None else None),
(cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None),
extended_predict_attention_mask,
main_relative_position_buckets,
predict_relative_position_buckets,
position_ids,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=extended_attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attn_mask=extended_encoder_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None
),
extended_predict_attention_mask=extended_predict_attention_mask,
main_relative_position_buckets=main_relative_position_buckets,
predict_relative_position_buckets=predict_relative_position_buckets,
position_ids=position_ids,
past_key_value=past_key_value,
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
present_key_values += (layer_outputs[4 if output_attentions else 1],)
if output_attentions:
all_main_stream_attns += (layer_outputs[1],)
all_ngram_stream_attns += (layer_outputs[2],)
if self.config.add_cross_attention:
all_cross_attns += (layer_outputs[3],)
if output_hidden_states:
all_main_stream_hidden_states += (hidden_states[:, :sequence_length],)
if self.config.ngram > 0:
all_ngram_stream_hidden_states += (hidden_states[:, sequence_length:],)
# split last_hidden_state for return
last_hidden_state = hidden_states[:, :sequence_length]
last_hidden_state_ngram = hidden_states[:, sequence_length:] if self.config.ngram > 0 else None
if not return_dict:
return tuple(
v
for v in [
last_hidden_state,
last_hidden_state_ngram,
present_key_values,
all_main_stream_hidden_states,
all_ngram_stream_hidden_states,
all_main_stream_attns,
all_ngram_stream_attns,
all_cross_attns,
]
if v is not None
)
return XLMProphetNetDecoderModelOutput(
last_hidden_state=last_hidden_state,
last_hidden_state_ngram=last_hidden_state_ngram,
past_key_values=present_key_values,
hidden_states=all_main_stream_hidden_states,
hidden_states_ngram=all_ngram_stream_hidden_states,
attentions=all_main_stream_attns,
ngram_attentions=all_ngram_stream_attns,
cross_attentions=all_cross_attns,
)
def compute_buffered_relative_buckets(self, position_ids):
batch_size, sequence_length = position_ids.shape
position_ids = torch.arange(1, self.max_target_positions).to(position_ids.device).repeat(1, 1)
main_relative_buckets, predict_relative_buckets = compute_all_stream_relative_buckets(
self.num_buckets, self.relative_max_distance, position_ids
)
# buffer relative buckets
main_relative_buckets = main_relative_buckets[:, :sequence_length, :sequence_length].repeat(batch_size, 1, 1)
predict_relative_buckets = torch.cat(
[
predict_relative_buckets[:, :sequence_length, :sequence_length],
predict_relative_buckets[
:, :sequence_length, self.max_target_positions : self.max_target_positions + sequence_length
],
],
2,
).repeat(batch_size, 1, 1)
return main_relative_buckets, predict_relative_buckets
def prepare_attention_mask(self, hidden_states, attention_mask):
batch_size, seq_length = hidden_states.shape[:2]
# get causal mask
causal_mask = torch.full(
(seq_length, seq_length),
torch.finfo(hidden_states.dtype).min,
dtype=hidden_states.dtype,
device=hidden_states.device,
)
causal_mask = torch.triu(causal_mask, 1)
extended_causal_mask = causal_mask[:seq_length, :seq_length][None, None, :, :].expand(
(batch_size, self.config.num_decoder_attention_heads) + causal_mask.shape
)
# add usual attention mask
if attention_mask is not None:
extended_attention_mask = (1.0 - attention_mask[:, None, None, :]) * torch.finfo(self.dtype).min
extended_attention_mask = extended_causal_mask + extended_attention_mask
else:
extended_attention_mask = extended_causal_mask
return extended_attention_mask.to(hidden_states.dtype)
def prepare_predict_attention_mask(self, hidden_states, attention_mask):
batch_size, seq_length = hidden_states.shape[:2]
# get causal mask
predict_causal_mask = ngram_attention_bias(
self.max_target_positions, self.ngram, hidden_states.device, hidden_states.dtype
)
predict_causal_mask = torch.cat(
[
predict_causal_mask[:, :seq_length, :seq_length],
predict_causal_mask[
:, :seq_length, self.max_target_positions : self.max_target_positions + seq_length
],
],
dim=-1,
)
extended_predict_causal_mask = predict_causal_mask[None, None, :, :, :].expand(
(batch_size, self.config.num_decoder_attention_heads) + predict_causal_mask.shape
)
# add usual attention mask
if attention_mask is not None:
extended_attention_mask = (1.0 - attention_mask[:, None, None, None, :]) * torch.finfo(self.dtype).min
extended_attention_mask = extended_attention_mask.expand(
(batch_size, self.config.num_decoder_attention_heads, self.ngram, seq_length, seq_length)
)
# predicted stream attention_mask should always be 0
extended_attention_mask = torch.cat(
[extended_attention_mask, torch.zeros_like(extended_attention_mask)], dim=-1
)
extended_predict_attention_mask = extended_predict_causal_mask + extended_attention_mask
else:
extended_predict_attention_mask = extended_predict_causal_mask
return extended_predict_attention_mask.to(hidden_states.dtype)
@add_start_docstrings(
"The bare XLMProphetNet Model outputting raw hidden-states without any specific head on top.",
XLM_PROPHETNET_START_DOCSTRING,
)
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetModel with microsoft/prophetnet-large-uncased->patrickvonplaten/xprophetnet-large-uncased-standalone, ProphetNet->XLMProphetNet, PROPHETNET->XLM_PROPHETNET
class XLMProphetNetModel(XLMProphetNetPreTrainedModel):
_keys_to_ignore_on_load_missing = ["decoder.word_embeddings.weight", "encoder.word_embeddings.weight"]
def __init__(self, config: XLMProphetNetConfig):
super().__init__(config)
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
encoder_config = copy.deepcopy(config)
encoder_config.is_encoder_decoder = False
encoder_config.use_cache = False
self.encoder = XLMProphetNetEncoder(encoder_config, self.word_embeddings)
decoder_config = copy.deepcopy(config)
decoder_config.is_decoder = True
decoder_config.is_encoder_decoder = False
self.decoder = XLMProphetNetDecoder(decoder_config, self.word_embeddings)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.word_embeddings
def set_input_embeddings(self, value):
self.word_embeddings = value
self.encoder.word_embeddings = self.word_embeddings
self.decoder.word_embeddings = self.word_embeddings
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(XLM_PROPHETNET_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=XLMProphetNetSeq2SeqModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.Tensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, XLMProphetNetSeq2SeqModelOutput]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, XLMProphetNetModel
>>> tokenizer = AutoTokenizer.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> model = XLMProphetNetModel.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="pt").input_ids # Batch size 1
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> last_hidden_states = outputs.last_hidden_state # main stream hidden states
>>> last_hidden_states_ngram = outputs.last_hidden_state_ngram # predict hidden states
```"""
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# decoder outputs consists of (dec_features, past_key_values, dec_hidden, dec_attn)
decoder_outputs = self.decoder(
input_ids=decoder_input_ids,
attention_mask=decoder_attention_mask,
encoder_hidden_states=encoder_outputs[0],
encoder_attention_mask=attention_mask,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=decoder_inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
use_cache=use_cache,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return XLMProphetNetSeq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
last_hidden_state_ngram=decoder_outputs.last_hidden_state_ngram,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_ngram_hidden_states=decoder_outputs.hidden_states_ngram,
decoder_attentions=decoder_outputs.attentions,
decoder_ngram_attentions=decoder_outputs.ngram_attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"The XLMProphetNet Model with a language modeling head. Can be used for sequence generation tasks.",
XLM_PROPHETNET_START_DOCSTRING,
)
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetForConditionalGeneration with microsoft/prophetnet-large-uncased->patrickvonplaten/xprophetnet-large-uncased-standalone, ProphetNet->XLMProphetNet, PROPHETNET->XLM_PROPHETNET
class XLMProphetNetForConditionalGeneration(XLMProphetNetPreTrainedModel):
_keys_to_ignore_on_load_missing = [
"decoder.word_embeddings.weight",
"encoder.word_embeddings.weight",
"lm_head.weight",
]
def __init__(self, config: XLMProphetNetConfig):
super().__init__(config)
self.prophetnet = XLMProphetNetModel(config)
self.padding_idx = config.pad_token_id
self.disable_ngram_loss = config.disable_ngram_loss
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def get_input_embeddings(self):
return self.prophetnet.word_embeddings
@add_start_docstrings_to_model_forward(XLM_PROPHETNET_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=XLMProphetNetSeq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.Tensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, XLMProphetNetSeq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[-100, 0, ...,
config.vocab_size - 1]`. All labels set to `-100` are ignored (masked), the loss is only computed for
labels in `[0, ..., config.vocab_size]`
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, XLMProphetNetForConditionalGeneration
>>> tokenizer = AutoTokenizer.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> model = XLMProphetNetForConditionalGeneration.from_pretrained(
... "patrickvonplaten/xprophetnet-large-uncased-standalone"
... )
>>> input_ids = tokenizer(
... "Studies have been shown that owning a dog is good for you", return_tensors="pt"
... ).input_ids # Batch size 1
>>> decoder_input_ids = tokenizer("Studies show that", return_tensors="pt").input_ids # Batch size 1
>>> outputs = model(input_ids=input_ids, decoder_input_ids=decoder_input_ids)
>>> logits_next_token = outputs.logits # logits to predict next token as usual
>>> logits_ngram_next_tokens = outputs.logits_ngram # logits to predict 2nd, 3rd, ... next tokens
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None and decoder_input_ids is None and decoder_inputs_embeds is None:
# get decoder inputs from shifting lm labels to the right
decoder_input_ids = self._shift_right(labels)
outputs = self.prophetnet(
input_ids=input_ids,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
encoder_outputs=encoder_outputs,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
decoder_inputs_embeds=decoder_inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
batch_size, sequence_length = (
decoder_input_ids.shape if decoder_input_ids is not None else decoder_inputs_embeds.shape[:2]
)
predicting_streams = outputs[1].view(batch_size, self.config.ngram, sequence_length, -1)
predict_logits = self.lm_head(predicting_streams)
logits = predict_logits[:, 0]
logits_ngram = predict_logits[:, 1:] if self.config.ngram > 1 else None
# To use .view in loss computation, make sure that logits is contiguous.
if not logits.is_contiguous():
logits = logits.contiguous()
loss = None
if labels is not None:
loss = self._compute_loss(predict_logits, labels)
if not return_dict:
all_logits = tuple(v for v in [logits, logits_ngram] if v is not None)
return (loss,) + all_logits + outputs[2:] if loss is not None else all_logits + outputs[2:]
else:
return XLMProphetNetSeq2SeqLMOutput(
loss=loss,
logits=logits,
logits_ngram=logits_ngram,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_ngram_hidden_states=outputs.decoder_ngram_hidden_states,
decoder_attentions=outputs.decoder_attentions,
decoder_ngram_attentions=outputs.decoder_ngram_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
def _compute_loss(self, logits, labels, ignore_index=-100):
expend_targets = labels.new_zeros(self.config.ngram, labels.size(0), labels.size(1)).fill_(ignore_index)
for i in range(self.config.ngram):
if i > 0 and self.disable_ngram_loss:
break
expend_targets[i, :, :] = labels
logits = logits.transpose(0, 1).contiguous()
lprobs = nn.functional.log_softmax(
logits.view(-1, logits.size(-1)),
dim=-1,
dtype=torch.float32,
)
loss = nn.functional.nll_loss(lprobs, expend_targets.view(-1), reduction="mean")
if self.config.eps > 0.0:
smooth_loss = -lprobs.sum(dim=-1, keepdim=True)
non_masked_tokens = expend_targets.ne(ignore_index).view(-1)
smooth_loss = smooth_loss[non_masked_tokens]
smooth_loss = smooth_loss.mean()
eps_i = self.config.eps / lprobs.size(-1)
loss = (1.0 - self.config.eps) * loss + eps_i * smooth_loss
return loss
def prepare_inputs_for_generation(
self,
decoder_input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
assert encoder_outputs is not None, "`encoder_outputs` have to be passed for generation."
if past_key_values:
decoder_input_ids = decoder_input_ids[:, -1:]
# first step, decoder_cached_states are empty
return {
"input_ids": None, # encoder_outputs is defined. input_ids not needed
"encoder_outputs": encoder_outputs,
"past_key_values": past_key_values,
"decoder_input_ids": decoder_input_ids,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache,
}
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return self._shift_right(labels)
@staticmethod
# Copied from transformers.models.bart.modeling_bart.BartForConditionalGeneration._reorder_cache
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
# cached cross_attention states don't have to be reordered -> they are always the same
reordered_past += (
tuple(past_state.index_select(0, beam_idx) for past_state in layer_past[:2]) + layer_past[2:],
)
return reordered_past
def get_encoder(self):
return self.prophetnet.encoder
def get_decoder(self):
return self.prophetnet.decoder
@add_start_docstrings(
"The standalone decoder part of the XLMProphetNetModel with a lm head on top. The model can be used for causal"
" language modeling.",
XLM_PROPHETNET_START_DOCSTRING,
)
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetForCausalLM with microsoft/prophetnet-large-uncased->patrickvonplaten/xprophetnet-large-uncased-standalone, ProphetNet->XLMProphetNet, PROPHETNET->XLM_PROPHETNET
class XLMProphetNetForCausalLM(XLMProphetNetPreTrainedModel):
_keys_to_ignore_on_load_missing = ["lm_head.weight"]
def __init__(self, config: XLMProphetNetConfig):
# set config for CLM
config = copy.deepcopy(config)
config.is_decoder = True
config.is_encoder_decoder = False
super().__init__(config)
self.prophetnet = XLMProphetNetDecoderWrapper(config)
self.padding_idx = config.pad_token_id
self.disable_ngram_loss = config.disable_ngram_loss
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.prophetnet.decoder.word_embeddings
def set_input_embeddings(self, value):
self.prophetnet.decoder.word_embeddings = value
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def set_decoder(self, decoder):
self.prophetnet.decoder = decoder
def get_decoder(self):
return self.prophetnet.decoder
@add_start_docstrings_to_model_forward(XLM_PROPHETNET_STANDALONE_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=XLMProphetNetDecoderLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, XLMProphetNetDecoderLMOutput]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the left-to-right language modeling loss (next word prediction). Indices should be in
`[-100, 0, ..., config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are
ignored (masked), the loss is only computed for the tokens with labels n `[0, ..., config.vocab_size]`
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, XLMProphetNetForCausalLM
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> model = XLMProphetNetForCausalLM.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> assert model.config.is_decoder, f"{model.__class__} has to be configured as a decoder."
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> # Model can also be used with EncoderDecoder framework
>>> from transformers import BertTokenizer, EncoderDecoderModel, AutoTokenizer
>>> import torch
>>> tokenizer_enc = BertTokenizer.from_pretrained("bert-large-uncased")
>>> tokenizer_dec = AutoTokenizer.from_pretrained("patrickvonplaten/xprophetnet-large-uncased-standalone")
>>> model = EncoderDecoderModel.from_encoder_decoder_pretrained(
... "bert-large-uncased", "patrickvonplaten/xprophetnet-large-uncased-standalone"
... )
>>> ARTICLE = (
... "the us state department said wednesday it had received no "
... "formal word from bolivia that it was expelling the us ambassador there "
... "but said the charges made against him are `` baseless ."
... )
>>> input_ids = tokenizer_enc(ARTICLE, return_tensors="pt").input_ids
>>> labels = tokenizer_dec(
... "us rejects charges against its ambassador in bolivia", return_tensors="pt"
... ).input_ids
>>> outputs = model(input_ids=input_ids, decoder_input_ids=labels[:, :-1], labels=labels[:, 1:])
>>> loss = outputs.loss
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# decoder outputs consists of (dec_features, past_key_values, dec_hidden, dec_attn)
outputs = self.prophetnet.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
batch_size, sequence_length = input_ids.shape if input_ids is not None else inputs_embeds.shape[:2]
predicting_streams = outputs[1].view(batch_size, self.config.ngram, sequence_length, -1)
predict_logits = self.lm_head(predicting_streams)
logits = predict_logits[:, 0]
logits_ngram = predict_logits[:, 1:] if self.config.ngram > 1 else None
loss = None
if labels is not None:
loss = self._compute_loss(predict_logits, labels)
if not return_dict:
all_logits = tuple(v for v in [logits, logits_ngram] if v is not None)
return (loss,) + all_logits + outputs[2:] if loss is not None else all_logits + outputs[2:]
else:
return XLMProphetNetDecoderLMOutput(
loss=loss,
logits=logits,
logits_ngram=logits_ngram,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
hidden_states_ngram=outputs.hidden_states_ngram,
attentions=outputs.attentions,
ngram_attentions=outputs.ngram_attentions,
cross_attentions=outputs.cross_attentions,
)
def _compute_loss(self, logits, labels, ignore_index=-100):
expend_targets = labels.new_zeros(self.config.ngram, labels.size(0), labels.size(1)).fill_(ignore_index)
for i in range(self.config.ngram):
if i > 0 and self.disable_ngram_loss:
break
expend_targets[i, :, :] = labels
logits = logits.transpose(0, 1).contiguous()
lprobs = nn.functional.log_softmax(
logits.view(-1, logits.size(-1)),
dim=-1,
dtype=torch.float32,
)
loss = nn.functional.nll_loss(lprobs, expend_targets.view(-1), reduction="mean")
if self.config.eps > 0.0:
smooth_loss = -lprobs.sum(dim=-1, keepdim=True)
non_masked_tokens = expend_targets.ne(ignore_index).view(-1)
smooth_loss = smooth_loss[non_masked_tokens]
smooth_loss = smooth_loss.mean()
eps_i = self.config.eps / lprobs.size(-1)
loss = (1.0 - self.config.eps) * loss + eps_i * smooth_loss
return loss
def prepare_inputs_for_generation(
self,
input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
use_cache=None,
**kwargs,
):
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_ids.shape)
if past_key_values:
input_ids = input_ids[:, -1:]
# first step, decoder_cached_states are empty
return {
"input_ids": input_ids, # encoder_outputs is defined. input_ids not needed
"attention_mask": attention_mask,
"head_mask": head_mask,
"past_key_values": past_key_values,
"use_cache": use_cache,
}
@staticmethod
# Copied from transformers.models.bart.modeling_bart.BartForCausalLM._reorder_cache
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
# Copied from transformers.models.prophetnet.modeling_prophetnet.ProphetNetDecoderWrapper with ProphetNet->XLMProphetNet, prophetnet->XLMProphetNet
class XLMProphetNetDecoderWrapper(XLMProphetNetPreTrainedModel):
"""
This is a wrapper class, so that [`XLMProphetNetForCausalLM`] can correctly be loaded from pretrained XLMProphetNet
classes.
"""
def __init__(self, config: XLMProphetNetConfig):
super().__init__(config)
self.decoder = XLMProphetNetDecoder(config)
def forward(self, *args, **kwargs):
return self.decoder(*args, **kwargs)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 1,862 | src/transformers/models/timesformer/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {
"configuration_timesformer": ["TIMESFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP", "TimesformerConfig"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_timesformer"] = [
"TIMESFORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
"TimesformerModel",
"TimesformerForVideoClassification",
"TimesformerPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_timesformer import TIMESFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP, TimesformerConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_timesformer import (
TIMESFORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
TimesformerForVideoClassification,
TimesformerModel,
TimesformerPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
233zzh/TitanDataOperationSystem | 1,104 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/function/ParticipationPage.scala | package cn.edu.neu.titan.titanSpark.migration.participation.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.currentDate
import cn.edu.neu.titan.titanSpark.migration.participation.executeMigrate2
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/20
* @Time: 11:46
* @Version: 1.0
* @Description: Description
*/
object ParticipationPage {
def main(args: Array[String]): Unit = {
migrate()
}
def migrate(): Unit = {
val tbDurationRange = Constants.MYSQL_TABLE_PAGE_RANGE
val tbTarget = Constants.MYSQL_TABLE_BASE_PARTICIPATION_PAGE
val tbSource = Constants.HIVE_TABLE_ADS_FLW_PAGE_CUBE
val dimName = "pv_num_range"
val colStartCount = "pv_count"
val colStart = "start_num" //单日使用总时长在指定范围内的用户数
// 声明需要增加的列
val colSource = Array((tbSource, colStartCount))
val colTarget = Array(colStart)
//时间
val dt = currentDate
// 执行迁移
executeMigrate2(dt, colSource, tbTarget, tbDurationRange, dimName, colTarget)
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 34,652 | src/transformers/models/timesformer/modeling_timesformer.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch TimeSformer model."""
import collections
from typing import Optional, Tuple, Union
import torch
import torch.nn.functional
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput, ImageClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_timesformer import TimesformerConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "TimesformerConfig"
_CHECKPOINT_FOR_DOC = "facebook/timesformer"
TIMESFORMER_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/timesformer-base-finetuned-k400",
# See all TimeSformer models at https://huggingface.co/models?filter=timesformer
]
# Adapted from https://github.com/facebookresearch/TimeSformer/blob/a5ef29a7b7264baff199a30b3306ac27de901133/timesformer/models/vit.py#L155
class TimesformerPatchEmbeddings(nn.Module):
"""Image to Patch Embedding"""
def __init__(self, config):
super().__init__()
image_size = config.image_size
patch_size = config.patch_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_patches = num_patches
self.projection = nn.Conv2d(config.num_channels, config.hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values):
batch_size, num_frames, num_channels, height, width = pixel_values.shape
pixel_values = pixel_values.reshape(batch_size * num_frames, num_channels, height, width)
embeddings = self.projection(pixel_values)
patch_width = embeddings.size(-1)
embeddings = embeddings.flatten(2).transpose(1, 2)
return embeddings, num_frames, patch_width
class TimesformerEmbeddings(nn.Module):
"""
Construct the patch and position embeddings.
"""
def __init__(self, config):
super().__init__()
embed_dim = config.hidden_size
num_frames = config.num_frames
drop_rate = config.hidden_dropout_prob
attention_type = config.attention_type
self.attention_type = attention_type
self.patch_embeddings = TimesformerPatchEmbeddings(config)
self.num_patches = self.patch_embeddings.num_patches
# Positional Embeddings
self.cls_token = nn.Parameter(torch.zeros(1, 1, embed_dim))
self.position_embeddings = nn.Parameter(torch.zeros(1, self.num_patches + 1, embed_dim))
self.pos_drop = nn.Dropout(p=drop_rate)
if attention_type != "space_only":
self.time_embeddings = nn.Parameter(torch.zeros(1, num_frames, embed_dim))
self.time_drop = nn.Dropout(p=drop_rate)
def forward(self, pixel_values):
batch_size = pixel_values.shape[0]
# create patch embeddings
embeddings, num_frames, patch_width = self.patch_embeddings(pixel_values)
cls_tokens = self.cls_token.expand(embeddings.size(0), -1, -1)
embeddings = torch.cat((cls_tokens, embeddings), dim=1)
# resizing the positional embeddings in case they don't match the input at inference
if embeddings.size(1) != self.position_embeddings.size(1):
position_embeddings = self.position_embeddings
cls_pos_embed = position_embeddings[0, 0, :].unsqueeze(0).unsqueeze(1)
other_pos_embed = position_embeddings[0, 1:, :].unsqueeze(0).transpose(1, 2)
patch_num = int(other_pos_embed.size(2) ** 0.5)
patch_height = embeddings.size(1) // patch_width
other_pos_embed = other_pos_embed.reshape(1, embeddings.size(2), patch_num, patch_num)
new_pos_embed = nn.functional.interpolate(
other_pos_embed, size=(patch_height, patch_width), mode="nearest"
)
new_pos_embed = new_pos_embed.flatten(2)
new_pos_embed = new_pos_embed.transpose(1, 2)
new_pos_embed = torch.cat((cls_pos_embed, new_pos_embed), 1)
embeddings = embeddings + new_pos_embed
else:
embeddings = embeddings + self.position_embeddings
embeddings = self.pos_drop(embeddings)
# Time Embeddings
if self.attention_type != "space_only":
cls_tokens = embeddings[:batch_size, 0, :].unsqueeze(1)
embeddings = embeddings[:, 1:]
_, patch_height, patch_width = embeddings.shape
embeddings = (
embeddings.reshape(batch_size, num_frames, patch_height, patch_width)
.permute(0, 2, 1, 3)
.reshape(batch_size * patch_height, num_frames, patch_width)
)
# Resizing time embeddings in case they don't match
if num_frames != self.time_embeddings.size(1):
time_embeddings = self.time_embeddings.transpose(1, 2)
new_time_embeddings = nn.functional.interpolate(time_embeddings, size=(num_frames), mode="nearest")
new_time_embeddings = new_time_embeddings.transpose(1, 2)
embeddings = embeddings + new_time_embeddings
else:
embeddings = embeddings + self.time_embeddings
embeddings = self.time_drop(embeddings)
embeddings = embeddings.view(batch_size, patch_height, num_frames, patch_width).reshape(
batch_size, patch_height * num_frames, patch_width
)
embeddings = torch.cat((cls_tokens, embeddings), dim=1)
return embeddings
# Copied from transformers.models.beit.modeling_beit.drop_path
def drop_path(input: torch.Tensor, drop_prob: float = 0.0, training: bool = False) -> torch.Tensor:
"""
Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).
Comment by Ross Wightman: This is the same as the DropConnect impl I created for EfficientNet, etc networks,
however, the original name is misleading as 'Drop Connect' is a different form of dropout in a separate paper...
See discussion: https://github.com/tensorflow/tpu/issues/494#issuecomment-532968956 ... I've opted for changing the
layer and argument names to 'drop path' rather than mix DropConnect as a layer name and use 'survival rate' as the
argument.
"""
if drop_prob == 0.0 or not training:
return input
keep_prob = 1 - drop_prob
shape = (input.shape[0],) + (1,) * (input.ndim - 1) # work with diff dim tensors, not just 2D ConvNets
random_tensor = keep_prob + torch.rand(shape, dtype=input.dtype, device=input.device)
random_tensor.floor_() # binarize
output = input.div(keep_prob) * random_tensor
return output
# Copied from transformers.models.beit.modeling_beit.BeitDropPath with Beit->TimeSformer
class TimeSformerDropPath(nn.Module):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks)."""
def __init__(self, drop_prob: Optional[float] = None) -> None:
super().__init__()
self.drop_prob = drop_prob
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
return drop_path(hidden_states, self.drop_prob, self.training)
def extra_repr(self) -> str:
return "p={}".format(self.drop_prob)
# Adapted from https://github.com/facebookresearch/TimeSformer/blob/a5ef29a7b7264baff199a30b3306ac27de901133/timesformer/models/vit.py#L57
class TimesformerSelfAttention(nn.Module):
def __init__(self, config: TimesformerConfig):
super().__init__()
num_heads = config.num_attention_heads
qkv_bias = config.qkv_bias
attention_dropout_prob = config.attention_probs_dropout_prob
self.num_heads = num_heads
head_dim = config.hidden_size // num_heads
self.scale = head_dim**-0.5
self.qkv = nn.Linear(config.hidden_size, config.hidden_size * 3, bias=qkv_bias)
self.attn_drop = nn.Dropout(attention_dropout_prob)
def forward(self, hidden_states, output_attentions: bool = False):
batch_size, hidden_size, num_channels = hidden_states.shape
qkv = (
self.qkv(hidden_states)
.reshape(batch_size, hidden_size, 3, self.num_heads, num_channels // self.num_heads)
.permute(2, 0, 3, 1, 4)
)
query, key, value = qkv[0], qkv[1], qkv[2]
attention_probs = (query @ key.transpose(-2, -1)) * self.scale
attention_probs = attention_probs.softmax(dim=-1)
attention_probs = self.attn_drop(attention_probs)
context_layer = (attention_probs @ value).transpose(1, 2).reshape(batch_size, hidden_size, num_channels)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
class TimesformerSelfOutput(nn.Module):
"""
The residual connection is defined in TimesformerLayer instead of here (as is the case with other models), due to
the layernorm applied before each block.
"""
def __init__(self, config: TimesformerConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class TimeSformerAttention(nn.Module):
def __init__(self, config: TimesformerConfig) -> None:
super().__init__()
self.attention = TimesformerSelfAttention(config)
self.output = TimesformerSelfOutput(config)
def forward(
self,
hidden_states: torch.Tensor,
output_attentions: bool = False,
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
self_outputs = self.attention(hidden_states, output_attentions)
attention_output = self.output(self_outputs[0])
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Adapted from https://github.com/facebookresearch/TimeSformer/blob/a5ef29a7b7264baff199a30b3306ac27de901133/timesformer/models/vit.py#L39
class TimesformerIntermediate(nn.Module):
def __init__(self, config: TimesformerConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class TimesformerOutput(nn.Module):
def __init__(self, config: TimesformerConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
# Adapted from https://github.com/facebookresearch/TimeSformer/blob/a5ef29a7b7264baff199a30b3306ac27de901133/timesformer/models/vit.py#L89
class TimesformerLayer(nn.Module):
def __init__(self, config: TimesformerConfig, layer_index: int) -> None:
super().__init__()
attention_type = config.attention_type
drop_path_rates = [
x.item() for x in torch.linspace(0, config.drop_path_rate, config.num_hidden_layers)
] # stochastic depth decay rule
drop_path_rate = drop_path_rates[layer_index]
self.drop_path = TimeSformerDropPath(config.drop_path_rate) if drop_path_rate > 0.0 else nn.Identity()
self.attention = TimeSformerAttention(config)
self.intermediate = TimesformerIntermediate(config)
self.output = TimesformerOutput(config)
self.layernorm_before = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.layernorm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.config = config
self.attention_type = attention_type
if attention_type not in ["divided_space_time", "space_only", "joint_space_time"]:
raise ValueError("Unknown attention type: {}".format(attention_type))
# Temporal Attention Parameters
if self.attention_type == "divided_space_time":
self.temporal_layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.temporal_attention = TimeSformerAttention(config)
self.temporal_dense = nn.Linear(config.hidden_size, config.hidden_size)
def forward(self, hidden_states: torch.Tensor, output_attentions: bool = False):
num_frames = self.config.num_frames
num_patch_width = self.config.image_size // self.config.patch_size
batch_size = hidden_states.shape[0]
num_spatial_tokens = (hidden_states.size(1) - 1) // num_frames
num_patch_height = num_spatial_tokens // num_patch_width
if self.attention_type in ["space_only", "joint_space_time"]:
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), output_attentions=output_attentions
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
hidden_states = hidden_states + self.drop_path(attention_output)
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = self.output(layer_output)
layer_output = hidden_states + self.drop_path(layer_output)
outputs = (layer_output,) + outputs
return outputs
elif self.attention_type == "divided_space_time":
# Temporal
temporal_embedding = hidden_states[:, 1:, :]
temporal_embedding = temporal_embedding.reshape(
batch_size, num_patch_height, num_patch_width, num_frames, temporal_embedding.shape[2]
).reshape(batch_size * num_patch_height * num_patch_width, num_frames, temporal_embedding.shape[2])
temporal_attention_outputs = self.temporal_attention(
self.temporal_layernorm(temporal_embedding),
)
attention_output = temporal_attention_outputs[0]
residual_temporal = self.drop_path(attention_output)
residual_temporal = residual_temporal.reshape(
batch_size, num_patch_height, num_patch_width, num_frames, residual_temporal.shape[2]
).reshape(batch_size, num_patch_height * num_patch_width * num_frames, residual_temporal.shape[2])
residual_temporal = self.temporal_dense(residual_temporal)
temporal_embedding = hidden_states[:, 1:, :] + residual_temporal
# Spatial
init_cls_token = hidden_states[:, 0, :].unsqueeze(1)
cls_token = init_cls_token.repeat(1, num_frames, 1)
cls_token = cls_token.reshape(batch_size * num_frames, 1, cls_token.shape[2])
spatial_embedding = temporal_embedding
spatial_embedding = (
spatial_embedding.reshape(
batch_size, num_patch_height, num_patch_width, num_frames, spatial_embedding.shape[2]
)
.permute(0, 3, 1, 2, 4)
.reshape(batch_size * num_frames, num_patch_height * num_patch_width, spatial_embedding.shape[2])
)
spatial_embedding = torch.cat((cls_token, spatial_embedding), 1)
spatial_attention_outputs = self.attention(
self.layernorm_before(spatial_embedding), output_attentions=output_attentions
)
attention_output = spatial_attention_outputs[0]
outputs = spatial_attention_outputs[1:] # add self attentions if we output attention weights
residual_spatial = self.drop_path(attention_output)
# Taking care of CLS token
cls_token = residual_spatial[:, 0, :]
cls_token = cls_token.reshape(batch_size, num_frames, cls_token.shape[1])
cls_token = torch.mean(cls_token, 1, True) # averaging for every frame
residual_spatial = residual_spatial[:, 1:, :]
residual_spatial = (
residual_spatial.reshape(
batch_size, num_frames, num_patch_height, num_patch_width, residual_spatial.shape[2]
)
.permute(0, 2, 3, 1, 4)
.reshape(batch_size, num_patch_height * num_patch_width * num_frames, residual_spatial.shape[2])
)
residual = residual_spatial
hidden_states = temporal_embedding
# Mlp
hidden_states = torch.cat((init_cls_token, hidden_states), 1) + torch.cat((cls_token, residual), 1)
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = self.output(layer_output)
layer_output = hidden_states + self.drop_path(layer_output)
outputs = (layer_output,) + outputs
return outputs
class TimesformerEncoder(nn.Module):
def __init__(self, config: TimesformerConfig) -> None:
super().__init__()
self.config = config
self.layer = nn.ModuleList([TimesformerLayer(config, ind) for ind in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
) -> Union[tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
)
else:
layer_outputs = layer_module(hidden_states, output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class TimesformerPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = TimesformerConfig
base_model_prefix = "timesformer"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
if isinstance(module, (nn.Linear, nn.Conv2d)):
nn.init.trunc_normal_(module.weight, std=self.config.initializer_range)
if module.bias is not None:
nn.init.constant_(module.bias, 0)
elif isinstance(module, nn.LayerNorm):
nn.init.constant_(module.bias, 0)
nn.init.constant_(module.weight, 1.0)
elif isinstance(module, TimesformerEmbeddings):
nn.init.trunc_normal_(module.cls_token, std=self.config.initializer_range)
nn.init.trunc_normal_(module.position_embeddings, std=self.config.initializer_range)
module.patch_embeddings.apply(self._init_weights)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, TimesformerEncoder):
module.gradient_checkpointing = value
TIMESFORMER_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it
as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`TimesformerConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
TIMESFORMER_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_frames, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoFeatureExtractor`]. See
[`VideoMAEFeatureExtractor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare TimeSformer Model transformer outputting raw hidden-states without any specific head on top.",
TIMESFORMER_START_DOCSTRING,
)
class TimesformerModel(TimesformerPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.config = config
self.embeddings = TimesformerEmbeddings(config)
self.encoder = TimesformerEncoder(config)
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(TIMESFORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Returns:
Examples:
```python
>>> import av
>>> import numpy as np
>>> from transformers import AutoImageProcessor, TimesformerModel
>>> from huggingface_hub import hf_hub_download
>>> np.random.seed(0)
>>> def read_video_pyav(container, indices):
... '''
... Decode the video with PyAV decoder.
... Args:
... container (`av.container.input.InputContainer`): PyAV container.
... indices (`List[int]`): List of frame indices to decode.
... Returns:
... result (np.ndarray): np array of decoded frames of shape (num_frames, height, width, 3).
... '''
... frames = []
... container.seek(0)
... start_index = indices[0]
... end_index = indices[-1]
... for i, frame in enumerate(container.decode(video=0)):
... if i > end_index:
... break
... if i >= start_index and i in indices:
... frames.append(frame)
... return np.stack([x.to_ndarray(format="rgb24") for x in frames])
>>> def sample_frame_indices(clip_len, frame_sample_rate, seg_len):
... converted_len = int(clip_len * frame_sample_rate)
... end_idx = np.random.randint(converted_len, seg_len)
... start_idx = end_idx - converted_len
... indices = np.linspace(start_idx, end_idx, num=clip_len)
... indices = np.clip(indices, start_idx, end_idx - 1).astype(np.int64)
... return indices
>>> # video clip consists of 300 frames (10 seconds at 30 FPS)
>>> file_path = hf_hub_download(
... repo_id="nielsr/video-demo", filename="eating_spaghetti.mp4", repo_type="dataset"
... )
>>> container = av.open(file_path)
>>> # sample 8 frames
>>> indices = sample_frame_indices(clip_len=8, frame_sample_rate=4, seg_len=container.streams.video[0].frames)
>>> video = read_video_pyav(container, indices)
>>> image_processor = AutoImageProcessor.from_pretrained("MCG-NJU/videomae-base")
>>> model = TimesformerModel.from_pretrained("facebook/timesformer-base-finetuned-k400")
>>> # prepare video for the model
>>> inputs = image_processor(list(video), return_tensors="pt")
>>> # forward pass
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
>>> list(last_hidden_states.shape)
[1, 1569, 768]
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
embedding_output = self.embeddings(pixel_values)
encoder_outputs = self.encoder(
embedding_output,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
if self.layernorm is not None:
sequence_output = self.layernorm(sequence_output)
if not return_dict:
return (sequence_output,) + encoder_outputs[1:]
return BaseModelOutput(
last_hidden_state=sequence_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings(
"""TimeSformer Model transformer with a video classification head on top (a linear layer on top of the final hidden state
of the [CLS] token) e.g. for ImageNet.""",
TIMESFORMER_START_DOCSTRING,
)
class TimesformerForVideoClassification(TimesformerPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.timesformer = TimesformerModel(config)
# Classifier head
self.classifier = nn.Linear(config.hidden_size, config.num_labels) if config.num_labels > 0 else nn.Identity()
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(TIMESFORMER_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=ImageClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, ImageClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> import av
>>> import torch
>>> import numpy as np
>>> from transformers import AutoImageProcessor, TimesformerForVideoClassification
>>> from huggingface_hub import hf_hub_download
>>> np.random.seed(0)
>>> def read_video_pyav(container, indices):
... '''
... Decode the video with PyAV decoder.
... Args:
... container (`av.container.input.InputContainer`): PyAV container.
... indices (`List[int]`): List of frame indices to decode.
... Returns:
... result (np.ndarray): np array of decoded frames of shape (num_frames, height, width, 3).
... '''
... frames = []
... container.seek(0)
... start_index = indices[0]
... end_index = indices[-1]
... for i, frame in enumerate(container.decode(video=0)):
... if i > end_index:
... break
... if i >= start_index and i in indices:
... frames.append(frame)
... return np.stack([x.to_ndarray(format="rgb24") for x in frames])
>>> def sample_frame_indices(clip_len, frame_sample_rate, seg_len):
... converted_len = int(clip_len * frame_sample_rate)
... end_idx = np.random.randint(converted_len, seg_len)
... start_idx = end_idx - converted_len
... indices = np.linspace(start_idx, end_idx, num=clip_len)
... indices = np.clip(indices, start_idx, end_idx - 1).astype(np.int64)
... return indices
>>> # video clip consists of 300 frames (10 seconds at 30 FPS)
>>> file_path = hf_hub_download(
... repo_id="nielsr/video-demo", filename="eating_spaghetti.mp4", repo_type="dataset"
... )
>>> container = av.open(file_path)
>>> # sample 8 frames
>>> indices = sample_frame_indices(clip_len=8, frame_sample_rate=1, seg_len=container.streams.video[0].frames)
>>> video = read_video_pyav(container, indices)
>>> image_processor = AutoImageProcessor.from_pretrained("MCG-NJU/videomae-base-finetuned-kinetics")
>>> model = TimesformerForVideoClassification.from_pretrained("facebook/timesformer-base-finetuned-k400")
>>> inputs = image_processor(list(video), return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**inputs)
... logits = outputs.logits
>>> # model predicts one of the 400 Kinetics-400 classes
>>> predicted_label = logits.argmax(-1).item()
>>> print(model.config.id2label[predicted_label])
eating spaghetti
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.timesformer(
pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0][:, 0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return ImageClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
|
233zzh/TitanDataOperationSystem | 1,307 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/function/ParticipationFrequencyMonth.scala | package cn.edu.neu.titan.titanSpark.migration.participation.function
import cn.edu.neu.titan.titanSpark.analysis.today
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.common.utils.DateUtils
import cn.edu.neu.titan.titanSpark.migration.currentMonth
import cn.edu.neu.titan.titanSpark.migration.participation.executeMigrate2
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/20
* @Time: 11:46
* @Version: 1.0
* @Description: Description
*/
object ParticipationFrequencyMonth {
def main(args: Array[String]): Unit = {
if (DateUtils.isFirstDayOfMonth(today)) {
migrate()
}
}
def migrate(): Unit = {
val tbDurationRange = Constants.MYSQL_TABLE_FREQUENCY_RANGE_MONTH
val tbTarget = Constants.MYSQL_TABLE_BASE_PARTICIPATION_FREQUENCY_MONTH
val tbSource = Constants.HIVE_TABLE_ADS_FLW_MSTART_CUBE
val dimName = "start_num_range"
val colStartCount = "start_count"
val colUser = "user_num" //单日使用总时长在指定范围内的用户数
// 声明需要增加的列
val colSource = Array((tbSource, colStartCount))
val colTarget = Array(colUser)
//时间
val dt = currentMonth
// 执行迁移
executeMigrate2(dt, colSource, tbTarget, tbDurationRange, dimName, colTarget)
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 5,659 | src/transformers/models/timesformer/configuration_timesformer.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TimeSformer model configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
TIMESFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/timesformer": "https://huggingface.co/facebook/timesformer/resolve/main/config.json",
}
class TimesformerConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`TimesformerModel`]. It is used to instantiate a
TimeSformer model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the TimeSformer
[facebook/timesformer](https://huggingface.co/facebook/timesformer-base-finetuned-k600) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 16):
The size (resolution) of each patch.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
num_frames (`int`, *optional*, defaults to 8):
The number of frames in each video.
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-6):
The epsilon used by the layer normalization layers.
qkv_bias (`bool`, *optional*, defaults to `True`):
Whether to add a bias to the queries, keys and values.
attention_type (`str`, *optional*, defaults to `"divided_space_time"`):
The attention type to use. Must be one of `"divided_space_time"`, `"space_only"`, `"joint_space_time"`.
drop_path_rate (`float`, *optional*, defaults to 0):
The dropout ratio for stochastic depth.
Example:
```python
>>> from transformers import TimesformerConfig, TimesformerModel
>>> # Initializing a TimeSformer timesformer-base style configuration
>>> configuration = TimesformerConfig()
>>> # Initializing a model from the configuration
>>> model = TimesformerModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "timesformer"
def __init__(
self,
image_size=224,
patch_size=16,
num_channels=3,
num_frames=8,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.0,
initializer_range=0.02,
layer_norm_eps=1e-6,
qkv_bias=True,
attention_type="divided_space_time",
drop_path_rate=0,
**kwargs,
):
super().__init__(**kwargs)
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_frames = num_frames
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.qkv_bias = qkv_bias
self.attention_type = attention_type
self.drop_path_rate = drop_path_rate
|
27182812/ChatGLM-LLaMA-chinese-insturct | 10,185 | src/transformers/models/timesformer/convert_timesformer_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert TimeSformer checkpoints from the original repository: https://github.com/MCG-NJU/TimeSformer"""
import argparse
import json
import gdown
import numpy as np
import torch
from huggingface_hub import hf_hub_download
from transformers import TimesformerConfig, TimesformerForVideoClassification, VideoMAEFeatureExtractor
def get_timesformer_config(model_name):
config = TimesformerConfig()
if "large" in model_name:
config.num_frames = 96
if "hr" in model_name:
config.num_frames = 16
config.image_size = 448
repo_id = "huggingface/label-files"
if "k400" in model_name:
config.num_labels = 400
filename = "kinetics400-id2label.json"
elif "k600" in model_name:
config.num_labels = 600
filename = "kinetics600-id2label.json"
elif "ssv2" in model_name:
config.num_labels = 174
filename = "something-something-v2-id2label.json"
else:
raise ValueError("Model name should either contain 'k400', 'k600' or 'ssv2'.")
id2label = json.load(open(hf_hub_download(repo_id, filename, repo_type="dataset"), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
return config
def rename_key(name):
if "encoder." in name:
name = name.replace("encoder.", "")
if "cls_token" in name:
name = name.replace("cls_token", "timesformer.embeddings.cls_token")
if "pos_embed" in name:
name = name.replace("pos_embed", "timesformer.embeddings.position_embeddings")
if "time_embed" in name:
name = name.replace("time_embed", "timesformer.embeddings.time_embeddings")
if "patch_embed.proj" in name:
name = name.replace("patch_embed.proj", "timesformer.embeddings.patch_embeddings.projection")
if "patch_embed.norm" in name:
name = name.replace("patch_embed.norm", "timesformer.embeddings.norm")
if "blocks" in name:
name = name.replace("blocks", "timesformer.encoder.layer")
if "attn.proj" in name:
name = name.replace("attn.proj", "attention.output.dense")
if "attn" in name and "bias" not in name and "temporal" not in name:
name = name.replace("attn", "attention.self")
if "attn" in name and "temporal" not in name:
name = name.replace("attn", "attention.attention")
if "temporal_norm1" in name:
name = name.replace("temporal_norm1", "temporal_layernorm")
if "temporal_attn.proj" in name:
name = name.replace("temporal_attn", "temporal_attention.output.dense")
if "temporal_fc" in name:
name = name.replace("temporal_fc", "temporal_dense")
if "norm1" in name and "temporal" not in name:
name = name.replace("norm1", "layernorm_before")
if "norm2" in name:
name = name.replace("norm2", "layernorm_after")
if "mlp.fc1" in name:
name = name.replace("mlp.fc1", "intermediate.dense")
if "mlp.fc2" in name:
name = name.replace("mlp.fc2", "output.dense")
if "norm.weight" in name and "fc" not in name and "temporal" not in name:
name = name.replace("norm.weight", "timesformer.layernorm.weight")
if "norm.bias" in name and "fc" not in name and "temporal" not in name:
name = name.replace("norm.bias", "timesformer.layernorm.bias")
if "head" in name:
name = name.replace("head", "classifier")
return name
def convert_state_dict(orig_state_dict, config):
for key in orig_state_dict.copy().keys():
val = orig_state_dict.pop(key)
if key.startswith("model."):
key = key.replace("model.", "")
if "qkv" in key:
key_split = key.split(".")
layer_num = int(key_split[1])
prefix = "timesformer.encoder.layer."
if "temporal" in key:
postfix = ".temporal_attention.attention.qkv."
else:
postfix = ".attention.attention.qkv."
if "weight" in key:
orig_state_dict[f"{prefix}{layer_num}{postfix}weight"] = val
else:
orig_state_dict[f"{prefix}{layer_num}{postfix}bias"] = val
else:
orig_state_dict[rename_key(key)] = val
return orig_state_dict
# We will verify our results on a video of eating spaghetti
# Frame indices used: [164 168 172 176 181 185 189 193 198 202 206 210 215 219 223 227]
def prepare_video():
file = hf_hub_download(
repo_id="hf-internal-testing/spaghetti-video", filename="eating_spaghetti.npy", repo_type="dataset"
)
video = np.load(file)
return list(video)
def convert_timesformer_checkpoint(checkpoint_url, pytorch_dump_folder_path, model_name, push_to_hub):
config = get_timesformer_config(model_name)
model = TimesformerForVideoClassification(config)
# download original checkpoint, hosted on Google Drive
output = "pytorch_model.bin"
gdown.cached_download(checkpoint_url, output, quiet=False)
files = torch.load(output, map_location="cpu")
if "model" in files:
state_dict = files["model"]
elif "module" in files:
state_dict = files["module"]
else:
state_dict = files["model_state"]
new_state_dict = convert_state_dict(state_dict, config)
model.load_state_dict(new_state_dict)
model.eval()
# verify model on basic input
feature_extractor = VideoMAEFeatureExtractor(image_mean=[0.5, 0.5, 0.5], image_std=[0.5, 0.5, 0.5])
video = prepare_video()
inputs = feature_extractor(video[:8], return_tensors="pt")
outputs = model(**inputs)
logits = outputs.logits
model_names = [
# Kinetics-400 checkpoints (hr = high resolution input of 448px instead of 224px)
"timesformer-base-finetuned-k400",
"timesformer-large-finetuned-k400",
"timesformer-hr-finetuned-k400",
# Kinetics-600 checkpoints (hr = high resolution input of 448px instead of 224px)
"timesformer-base-finetuned-k600",
"timesformer-large-finetuned-k600",
"timesformer-hr-finetuned-k600",
# Something-Something-v2 checkpoints (hr = high resolution input of 448px instead of 224px)
"timesformer-base-finetuned-ssv2",
"timesformer-large-finetuned-ssv2",
"timesformer-hr-finetuned-ssv2",
]
# NOTE: logits were tested with image_mean and image_std equal to [0.5, 0.5, 0.5] and [0.5, 0.5, 0.5]
if model_name == "timesformer-base-finetuned-k400":
expected_shape = torch.Size([1, 400])
expected_slice = torch.tensor([-0.3016, -0.7713, -0.4205])
elif model_name == "timesformer-base-finetuned-k600":
expected_shape = torch.Size([1, 600])
expected_slice = torch.tensor([-0.7267, -0.7466, 3.2404])
elif model_name == "timesformer-base-finetuned-ssv2":
expected_shape = torch.Size([1, 174])
expected_slice = torch.tensor([-0.9059, 0.6433, -3.1457])
elif model_name == "timesformer-large-finetuned-k400":
expected_shape = torch.Size([1, 400])
expected_slice = torch.tensor([0, 0, 0])
elif model_name == "timesformer-large-finetuned-k600":
expected_shape = torch.Size([1, 600])
expected_slice = torch.tensor([0, 0, 0])
elif model_name == "timesformer-large-finetuned-ssv2":
expected_shape = torch.Size([1, 174])
expected_slice = torch.tensor([0, 0, 0])
elif model_name == "timesformer-hr-finetuned-k400":
expected_shape = torch.Size([1, 400])
expected_slice = torch.tensor([-0.9617, -3.7311, -3.7708])
elif model_name == "timesformer-hr-finetuned-k600":
expected_shape = torch.Size([1, 600])
expected_slice = torch.tensor([2.5273, 0.7127, 1.8848])
elif model_name == "timesformer-hr-finetuned-ssv2":
expected_shape = torch.Size([1, 174])
expected_slice = torch.tensor([-3.6756, -0.7513, 0.7180])
else:
raise ValueError(f"Model name not supported. Should be one of {model_names}")
# verify logits
assert logits.shape == expected_shape
assert torch.allclose(logits[0, :3], expected_slice, atol=1e-4)
print("Logits ok!")
if pytorch_dump_folder_path is not None:
print(f"Saving model and feature extractor to {pytorch_dump_folder_path}")
feature_extractor.save_pretrained(pytorch_dump_folder_path)
model.save_pretrained(pytorch_dump_folder_path)
if push_to_hub:
print("Pushing to the hub...")
model.push_to_hub(f"fcakyon/{model_name}")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--checkpoint_url",
default="https://drive.google.com/u/1/uc?id=17yvuYp9L4mn-HpIcK5Zo6K3UoOy1kA5l&export=download",
type=str,
help=(
"URL of the original PyTorch checkpoint (on Google Drive) you'd like to convert. Should be a direct"
" download link."
),
)
parser.add_argument(
"--pytorch_dump_folder_path",
default="",
type=str,
help="Path to the output PyTorch model directory.",
)
parser.add_argument("--model_name", default="timesformer-base-finetuned-k400", type=str, help="Name of the model.")
parser.add_argument(
"--push_to_hub", action="store_true", help="Whether or not to push the converted model to the 🤗 hub."
)
args = parser.parse_args()
convert_timesformer_checkpoint(
args.checkpoint_url, args.pytorch_dump_folder_path, args.model_name, args.push_to_hub
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,952 | src/transformers/models/tapas/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {
"configuration_tapas": ["TAPAS_PRETRAINED_CONFIG_ARCHIVE_MAP", "TapasConfig"],
"tokenization_tapas": ["TapasTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tapas"] = [
"TAPAS_PRETRAINED_MODEL_ARCHIVE_LIST",
"TapasForMaskedLM",
"TapasForQuestionAnswering",
"TapasForSequenceClassification",
"TapasModel",
"TapasPreTrainedModel",
"load_tf_weights_in_tapas",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_tapas"] = [
"TF_TAPAS_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFTapasForMaskedLM",
"TFTapasForQuestionAnswering",
"TFTapasForSequenceClassification",
"TFTapasModel",
"TFTapasPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_tapas import TAPAS_PRETRAINED_CONFIG_ARCHIVE_MAP, TapasConfig
from .tokenization_tapas import TapasTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tapas import (
TAPAS_PRETRAINED_MODEL_ARCHIVE_LIST,
TapasForMaskedLM,
TapasForQuestionAnswering,
TapasForSequenceClassification,
TapasModel,
TapasPreTrainedModel,
load_tf_weights_in_tapas,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_tapas import (
TF_TAPAS_PRETRAINED_MODEL_ARCHIVE_LIST,
TFTapasForMaskedLM,
TFTapasForQuestionAnswering,
TFTapasForSequenceClassification,
TFTapasModel,
TFTapasPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
233zzh/TitanDataOperationSystem | 1,205 | 代码/spark任务代码/titanSpark/src/main/scala/cn/edu/neu/titan/titanSpark/migration/participation/function/ParticipationDurationSingle.scala | package cn.edu.neu.titan.titanSpark.migration.participation.function
import cn.edu.neu.titan.titanSpark.common.constant.Constants
import cn.edu.neu.titan.titanSpark.migration.currentDate
import cn.edu.neu.titan.titanSpark.migration.participation.executeMigrate2
/**
* Created by IntelliJ IDEA.
*
* @Author: 张志浩 Zhang Zhihao
* @Email: 3382885270@qq.com
* @Date: 2020/7/20
* @Time: 11:10
* @Version: 1.0
* @Description: Description
*/
object ParticipationDurationSingle {
def main(args: Array[String]): Unit = {
migrate()
}
def migrate(): Unit = {
val tbDurationRange = Constants.MYSQL_TABLE_DURATION_RANGE_SINGLE
val tbTarget = Constants.MYSQL_TABLE_BASE_PARTICIPATION_DURATION_SINGLE
val tbSource = Constants.HIVE_TABLE_ADS_FLW_SDURATION_CUBE
//需要转id的列
val dimName = "duration_range"
//hive的num列
val colDurationCount = "duration_count"
//mysql的num列
val colStart = "start_num" //单日单次使用时长在指定范围内的使用次数
// 声明需要增加的列
val colSource = Array((tbSource, colDurationCount))
val colTarget = Array(colStart)
//时间
val dt = currentDate
// 执行迁移
executeMigrate2(dt, colSource, tbTarget, tbDurationRange, dimName, colTarget)
}
}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 5,049 | src/transformers/models/tapas/convert_tapas_original_tf_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2020 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert TAPAS checkpoint."""
import argparse
from transformers import (
TapasConfig,
TapasForMaskedLM,
TapasForQuestionAnswering,
TapasForSequenceClassification,
TapasModel,
TapasTokenizer,
load_tf_weights_in_tapas,
)
from transformers.utils import logging
logging.set_verbosity_info()
def convert_tf_checkpoint_to_pytorch(
task, reset_position_index_per_cell, tf_checkpoint_path, tapas_config_file, pytorch_dump_path
):
# Initialise PyTorch model.
# If you want to convert a checkpoint that uses absolute position embeddings, make sure to set reset_position_index_per_cell of
# TapasConfig to False.
# initialize configuration from json file
config = TapasConfig.from_json_file(tapas_config_file)
# set absolute/relative position embeddings parameter
config.reset_position_index_per_cell = reset_position_index_per_cell
# set remaining parameters of TapasConfig as well as the model based on the task
if task == "SQA":
model = TapasForQuestionAnswering(config=config)
elif task == "WTQ":
# run_task_main.py hparams
config.num_aggregation_labels = 4
config.use_answer_as_supervision = True
# hparam_utils.py hparams
config.answer_loss_cutoff = 0.664694
config.cell_selection_preference = 0.207951
config.huber_loss_delta = 0.121194
config.init_cell_selection_weights_to_zero = True
config.select_one_column = True
config.allow_empty_column_selection = False
config.temperature = 0.0352513
model = TapasForQuestionAnswering(config=config)
elif task == "WIKISQL_SUPERVISED":
# run_task_main.py hparams
config.num_aggregation_labels = 4
config.use_answer_as_supervision = False
# hparam_utils.py hparams
config.answer_loss_cutoff = 36.4519
config.cell_selection_preference = 0.903421
config.huber_loss_delta = 222.088
config.init_cell_selection_weights_to_zero = True
config.select_one_column = True
config.allow_empty_column_selection = True
config.temperature = 0.763141
model = TapasForQuestionAnswering(config=config)
elif task == "TABFACT":
model = TapasForSequenceClassification(config=config)
elif task == "MLM":
model = TapasForMaskedLM(config=config)
elif task == "INTERMEDIATE_PRETRAINING":
model = TapasModel(config=config)
else:
raise ValueError(f"Task {task} not supported.")
print(f"Building PyTorch model from configuration: {config}")
# Load weights from tf checkpoint
load_tf_weights_in_tapas(model, config, tf_checkpoint_path)
# Save pytorch-model (weights and configuration)
print(f"Save PyTorch model to {pytorch_dump_path}")
model.save_pretrained(pytorch_dump_path)
# Save tokenizer files
print(f"Save tokenizer files to {pytorch_dump_path}")
tokenizer = TapasTokenizer(vocab_file=tf_checkpoint_path[:-10] + "vocab.txt", model_max_length=512)
tokenizer.save_pretrained(pytorch_dump_path)
print("Used relative position embeddings:", model.config.reset_position_index_per_cell)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--task", default="SQA", type=str, help="Model task for which to convert a checkpoint. Defaults to SQA."
)
parser.add_argument(
"--reset_position_index_per_cell",
default=False,
action="store_true",
help="Whether to use relative position embeddings or not. Defaults to True.",
)
parser.add_argument(
"--tf_checkpoint_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--tapas_config_file",
default=None,
type=str,
required=True,
help=(
"The config json file corresponding to the pre-trained TAPAS model. \n"
"This specifies the model architecture."
),
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_tf_checkpoint_to_pytorch(
args.task,
args.reset_position_index_per_cell,
args.tf_checkpoint_path,
args.tapas_config_file,
args.pytorch_dump_path,
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 108,611 | src/transformers/models/tapas/modeling_tf_tapas.py | # coding=utf-8
# Copyright 2021 Google Research and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""TF 2.0 TAPAS model."""
import enum
import math
from dataclasses import dataclass
from typing import Dict, Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import (
TFBaseModelOutputWithPastAndCrossAttentions,
TFBaseModelOutputWithPooling,
TFMaskedLMOutput,
TFSequenceClassifierOutput,
)
from ...modeling_tf_utils import (
TFMaskedLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import shape_list, stable_softmax
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_tensorflow_probability_available,
logging,
replace_return_docstrings,
requires_backends,
)
from .configuration_tapas import TapasConfig
logger = logging.get_logger(__name__)
# soft dependency
if is_tensorflow_probability_available():
try:
import tensorflow_probability as tfp
# On the first call, check whether a compatible version of TensorFlow is installed
# TensorFlow Probability depends on a recent stable release of TensorFlow
n = tfp.distributions.Normal(loc=0.0, scale=1.0)
except ImportError:
logger.error(
"TAPAS models are not usable since `tensorflow_probability` can't be loaded."
"It seems you have `tensorflow_probability` installed with the wrong tensorflow version."
"Please try to reinstall it following the instructions here: https://github.com/tensorflow/probability."
)
_CONFIG_FOR_DOC = "TapasConfig"
_CHECKPOINT_FOR_DOC = "google/tapas-base"
TF_TAPAS_PRETRAINED_MODEL_ARCHIVE_LIST = [
# large models
"google/tapas-large",
"google/tapas-large-finetuned-sqa",
"google/tapas-large-finetuned-wtq",
"google/tapas-large-finetuned-wikisql-supervised",
"google/tapas-large-finetuned-tabfact",
# base models
"google/tapas-base",
"google/tapas-base-finetuned-sqa",
"google/tapas-base-finetuned-wtq",
"google/tapas-base-finetuned-wikisql-supervised",
"google/tapas-base-finetuned-tabfact",
# small models
"google/tapas-small",
"google/tapas-small-finetuned-sqa",
"google/tapas-small-finetuned-wtq",
"google/tapas-small-finetuned-wikisql-supervised",
"google/tapas-small-finetuned-tabfact",
# mini models
"google/tapas-mini",
"google/tapas-mini-finetuned-sqa",
"google/tapas-mini-finetuned-wtq",
"google/tapas-mini-finetuned-wikisql-supervised",
"google/tapas-mini-finetuned-tabfact",
# tiny models
"google/tapas-tiny",
"google/tapas-tiny-finetuned-sqa",
"google/tapas-tiny-finetuned-wtq",
"google/tapas-tiny-finetuned-wikisql-supervised",
"google/tapas-tiny-finetuned-tabfact",
# See all TAPAS models at https://huggingface.co/models?filter=tapas
]
EPSILON_ZERO_DIVISION = 1e-10
CLOSE_ENOUGH_TO_LOG_ZERO = -10000.0
@dataclass
class TFTableQuestionAnsweringOutput(ModelOutput):
"""
Output type of [`TFTapasForQuestionAnswering`].
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `labels` (and possibly `answer`, `aggregation_labels`, `numeric_values` and `numeric_values_scale` are provided)):
Total loss as the sum of the hierarchical cell selection log-likelihood loss and (optionally) the
semi-supervised regression loss and (optionally) supervised loss for aggregations.
logits (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Prediction scores of the cell selection head, for every token.
logits_aggregation (`tf.Tensor`, *optional*, of shape `(batch_size, num_aggregation_labels)`):
Prediction scores of the aggregation head, for every aggregation operator.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer plus
the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
loss: Optional[tf.Tensor] = None
logits: tf.Tensor = None
logits_aggregation: Optional[tf.Tensor] = None
hidden_states: Optional[Tuple[tf.Tensor]] = None
attentions: Optional[Tuple[tf.Tensor]] = None
class TFTapasEmbeddings(tf.keras.layers.Layer):
"""
Construct the embeddings from word, position and token_type embeddings. Same as BertEmbeddings but with a number of
additional token type embeddings to encode tabular structure.
"""
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.number_of_token_type_embeddings = len(config.type_vocab_sizes)
self.reset_position_index_per_cell = config.reset_position_index_per_cell
self.hidden_size = config.hidden_size
self.max_position_embeddings = config.max_position_embeddings
self.initializer_range = config.initializer_range
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def build(self, input_shape: tf.TensorShape):
with tf.name_scope("word_embeddings"):
self.weight = self.add_weight(
name="weight",
shape=[self.config.vocab_size, self.hidden_size],
initializer=get_initializer(self.initializer_range),
)
with tf.name_scope("position_embeddings"):
self.position_embeddings = self.add_weight(
name="embeddings",
shape=[self.max_position_embeddings, self.hidden_size],
initializer=get_initializer(self.initializer_range),
)
for i, type_vocab_size in enumerate(self.config.type_vocab_sizes):
with tf.name_scope(f"token_type_embeddings_{i}"):
setattr(
self,
f"token_type_embeddings_{i}",
self.add_weight(
name="embeddings",
shape=[type_vocab_size, self.hidden_size],
initializer=get_initializer(self.initializer_range),
),
)
super().build(input_shape)
def call(
self,
input_ids: tf.Tensor = None,
position_ids: tf.Tensor = None,
token_type_ids: tf.Tensor = None,
inputs_embeds: tf.Tensor = None,
training: bool = False,
) -> tf.Tensor:
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
assert not (input_ids is None and inputs_embeds is None)
if input_ids is not None:
input_shape = shape_list(input_ids)
else:
input_shape = shape_list(inputs_embeds)[:-1]
seq_length = input_shape[1]
if token_type_ids is None:
token_type_ids = tf.fill(dims=input_shape + [self.number_of_token_type_embeddings], value=0)
if position_ids is None:
# create absolute position embeddings
position_ids = tf.expand_dims(tf.range(start=0, limit=seq_length), axis=0)
position_ids = tf.broadcast_to(position_ids, shape=input_shape)
# when self.config.reset_position_index_per_cell is set to True, create relative position embeddings
if self.reset_position_index_per_cell:
# shape (batch_size, seq_len)
col_index = IndexMap(token_type_ids[:, :, 1], self.config.type_vocab_sizes[1], batch_dims=1)
# shape (batch_size, seq_len)
row_index = IndexMap(token_type_ids[:, :, 2], self.config.type_vocab_sizes[2], batch_dims=1)
# shape (batch_size, seq_len)
full_index = ProductIndexMap(col_index, row_index)
# shape (max_rows * max_columns,). First absolute position for every cell
first_position_per_segment = reduce_min(position_ids, full_index)[0]
# ? shape (batch_size, seq_len). First absolute position of the cell for every token
first_position = gather(first_position_per_segment, full_index)
# shape (1, seq_len)
position = tf.expand_dims(tf.range(start=0, limit=seq_length), axis=0)
position_ids = tf.math.minimum(self.max_position_embeddings - 1, position - first_position)
if input_ids is not None:
# Note: tf.gather, on which the embedding layer is based, won't check positive out of bound
# indices on GPU, returning zeros instead. This is a dangerous silent behavior.
tf.debugging.assert_less(
input_ids,
tf.cast(self.config.vocab_size, dtype=input_ids.dtype),
message=(
"input_ids must be smaller than the embedding layer's input dimension (got"
f" {tf.math.reduce_max(input_ids)} >= {self.config.vocab_size})"
),
)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
position_embeddings = tf.gather(self.position_embeddings, indices=position_ids)
final_embeddings = inputs_embeds + position_embeddings
for i in range(self.number_of_token_type_embeddings):
name = f"token_type_embeddings_{i}"
final_embeddings += tf.gather(params=getattr(self, name), indices=token_type_ids[:, :, i])
final_embeddings = self.LayerNorm(inputs=final_embeddings)
final_embeddings = self.dropout(inputs=final_embeddings, training=training)
return final_embeddings
# Copied from transformers.models.bert.modeling_tf_bert.TFBertSelfAttention with Bert->Tapas
class TFTapasSelfAttention(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number "
f"of attention heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.sqrt_att_head_size = math.sqrt(self.attention_head_size)
self.query = tf.keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = tf.keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key"
)
self.value = tf.keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = tf.keras.layers.Dropout(rate=config.attention_probs_dropout_prob)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, tensor: tf.Tensor, batch_size: int) -> tf.Tensor:
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
tensor = tf.reshape(tensor=tensor, shape=(batch_size, -1, self.num_attention_heads, self.attention_head_size))
# Transpose the tensor from [batch_size, seq_length, num_attention_heads, attention_head_size] to [batch_size, num_attention_heads, seq_length, attention_head_size]
return tf.transpose(tensor, perm=[0, 2, 1, 3])
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: tf.Tensor,
encoder_attention_mask: tf.Tensor,
past_key_value: Tuple[tf.Tensor],
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
batch_size = shape_list(hidden_states)[0]
mixed_query_layer = self.query(inputs=hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(inputs=encoder_hidden_states), batch_size)
value_layer = self.transpose_for_scores(self.value(inputs=encoder_hidden_states), batch_size)
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(inputs=hidden_states), batch_size)
value_layer = self.transpose_for_scores(self.value(inputs=hidden_states), batch_size)
key_layer = tf.concat([past_key_value[0], key_layer], axis=2)
value_layer = tf.concat([past_key_value[1], value_layer], axis=2)
else:
key_layer = self.transpose_for_scores(self.key(inputs=hidden_states), batch_size)
value_layer = self.transpose_for_scores(self.value(inputs=hidden_states), batch_size)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
# (batch size, num_heads, seq_len_q, seq_len_k)
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
dk = tf.cast(self.sqrt_att_head_size, dtype=attention_scores.dtype)
attention_scores = tf.divide(attention_scores, dk)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in TFTapasModel call() function)
attention_scores = tf.add(attention_scores, attention_mask)
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(logits=attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(inputs=attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = tf.multiply(attention_probs, head_mask)
attention_output = tf.matmul(attention_probs, value_layer)
attention_output = tf.transpose(attention_output, perm=[0, 2, 1, 3])
# (batch_size, seq_len_q, all_head_size)
attention_output = tf.reshape(tensor=attention_output, shape=(batch_size, -1, self.all_head_size))
outputs = (attention_output, attention_probs) if output_attentions else (attention_output,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
# Copied from transformers.models.bert.modeling_tf_bert.TFBertSelfOutput with Bert->Tapas
class TFTapasSelfOutput(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
hidden_states = self.LayerNorm(inputs=hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertAttention with Bert->Tapas
class TFTapasAttention(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.self_attention = TFTapasSelfAttention(config, name="self")
self.dense_output = TFTapasSelfOutput(config, name="output")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
input_tensor: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: tf.Tensor,
encoder_attention_mask: tf.Tensor,
past_key_value: Tuple[tf.Tensor],
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
self_outputs = self.self_attention(
hidden_states=input_tensor,
attention_mask=attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=past_key_value,
output_attentions=output_attentions,
training=training,
)
attention_output = self.dense_output(
hidden_states=self_outputs[0], input_tensor=input_tensor, training=training
)
# add attentions (possibly with past_key_value) if we output them
outputs = (attention_output,) + self_outputs[1:]
return outputs
# Copied from transformers.models.bert.modeling_tf_bert.TFBertIntermediate with Bert->Tapas
class TFTapasIntermediate(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.intermediate_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertOutput with Bert->Tapas
class TFTapasOutput(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = tf.keras.layers.Dropout(rate=config.hidden_dropout_prob)
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
hidden_states = self.LayerNorm(inputs=hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertLayer with Bert->Tapas
class TFTapasLayer(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.attention = TFTapasAttention(config, name="attention")
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = TFTapasAttention(config, name="crossattention")
self.intermediate = TFTapasIntermediate(config, name="intermediate")
self.bert_output = TFTapasOutput(config, name="output")
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: Optional[tf.Tensor],
encoder_attention_mask: Optional[tf.Tensor],
past_key_value: Optional[Tuple[tf.Tensor]],
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
input_tensor=hidden_states,
attention_mask=attention_mask,
head_mask=head_mask,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=self_attn_past_key_value,
output_attentions=output_attentions,
training=training,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
input_tensor=attention_output,
attention_mask=attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
training=training,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
intermediate_output = self.intermediate(hidden_states=attention_output)
layer_output = self.bert_output(
hidden_states=intermediate_output, input_tensor=attention_output, training=training
)
outputs = (layer_output,) + outputs # add attentions if we output them
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
# Copied from transformers.models.bert.modeling_tf_bert.TFBertEncoder with Bert->Tapas
class TFTapasEncoder(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.layer = [TFTapasLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: Optional[tf.Tensor],
encoder_attention_mask: Optional[tf.Tensor],
past_key_values: Optional[Tuple[Tuple[tf.Tensor]]],
use_cache: Optional[bool],
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[TFBaseModelOutputWithPastAndCrossAttentions, Tuple[tf.Tensor]]:
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
past_key_value = past_key_values[i] if past_key_values is not None else None
layer_outputs = layer_module(
hidden_states=hidden_states,
attention_mask=attention_mask,
head_mask=head_mask[i],
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=past_key_value,
output_attentions=output_attentions,
training=training,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if self.config.add_cross_attention and encoder_hidden_states is not None:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v for v in [hidden_states, all_hidden_states, all_attentions, all_cross_attentions] if v is not None
)
return TFBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPooler with Bert->Tapas
class TFTapasPooler(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(inputs=first_token_tensor)
return pooled_output
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPredictionHeadTransform with Bert->Tapas
class TFTapasPredictionHeadTransform(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
if isinstance(config.hidden_act, str):
self.transform_act_fn = get_tf_activation(config.hidden_act)
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(inputs=hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertLMPredictionHead with Bert->Tapas
class TFTapasLMPredictionHead(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, input_embeddings: tf.keras.layers.Layer, **kwargs):
super().__init__(**kwargs)
self.config = config
self.hidden_size = config.hidden_size
self.transform = TFTapasPredictionHeadTransform(config, name="transform")
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.input_embeddings = input_embeddings
def build(self, input_shape: tf.TensorShape):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
super().build(input_shape)
def get_output_embeddings(self) -> tf.keras.layers.Layer:
return self.input_embeddings
def set_output_embeddings(self, value: tf.Variable):
self.input_embeddings.weight = value
self.input_embeddings.vocab_size = shape_list(value)[0]
def get_bias(self) -> Dict[str, tf.Variable]:
return {"bias": self.bias}
def set_bias(self, value: tf.Variable):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.transform(hidden_states=hidden_states)
seq_length = shape_list(hidden_states)[1]
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, self.hidden_size])
hidden_states = tf.matmul(a=hidden_states, b=self.input_embeddings.weight, transpose_b=True)
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, seq_length, self.config.vocab_size])
hidden_states = tf.nn.bias_add(value=hidden_states, bias=self.bias)
return hidden_states
# Copied from transformers.models.bert.modeling_tf_bert.TFBertMLMHead with Bert->Tapas
class TFTapasMLMHead(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, input_embeddings: tf.keras.layers.Layer, **kwargs):
super().__init__(**kwargs)
self.predictions = TFTapasLMPredictionHead(config, input_embeddings, name="predictions")
def call(self, sequence_output: tf.Tensor) -> tf.Tensor:
prediction_scores = self.predictions(hidden_states=sequence_output)
return prediction_scores
@keras_serializable
class TFTapasMainLayer(tf.keras.layers.Layer):
config_class = TapasConfig
def __init__(self, config: TapasConfig, add_pooling_layer: bool = True, **kwargs):
requires_backends(self, "tensorflow_probability")
super().__init__(**kwargs)
self.config = config
self.embeddings = TFTapasEmbeddings(config, name="embeddings")
self.encoder = TFTapasEncoder(config, name="encoder")
self.pooler = TFTapasPooler(config, name="pooler") if add_pooling_layer else None
def get_input_embeddings(self) -> tf.keras.layers.Layer:
return self.embeddings
def set_input_embeddings(self, value: tf.Variable):
self.embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
if token_type_ids is None:
token_type_ids = tf.fill(dims=input_shape + [len(self.config.type_vocab_sizes)], value=0)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
training=training,
)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
extended_attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.config.num_hidden_layers
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(hidden_states=sequence_output) if self.pooler is not None else None
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class TFTapasPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = TapasConfig
base_model_prefix = "tapas"
@tf.function(
input_signature=[
{
"input_ids": tf.TensorSpec((None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None), tf.float32, name="attention_mask"),
"token_type_ids": tf.TensorSpec((None, None, None), tf.int32, name="token_type_ids"),
}
]
)
def serving(self, inputs):
output = self.call(inputs)
return self.serving_output(output)
TAPAS_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`TapasConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
TAPAS_INPUTS_DOCSTRING = r"""
Args:
input_ids (`np.ndarray`, `tf.Tensor`, `List[tf.Tensor]` ``Dict[str, tf.Tensor]` or `Dict[str, np.ndarray]` and each example must have the shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`np.ndarray` or `tf.Tensor` of shape `({0}, 7)`, *optional*):
Token indices that encode tabular structure. Indices can be obtained using [`AutoTokenizer`]. See this
class for more info.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`np.ndarray` or `tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. If
`reset_position_index_per_cell` of [`TapasConfig`] is set to `True`, relative position embeddings will be
used. Selected in the range `[0, config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`np.ndarray` or `tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`np.ndarray` or `tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False``):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare Tapas Model transformer outputting raw hidden-states without any specific head on top.",
TAPAS_START_DOCSTRING,
)
class TFTapasModel(TFTapasPreTrainedModel):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.tapas = TFTapasMainLayer(config, name="tapas")
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFBaseModelOutputWithPooling, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasModel
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasModel.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="tf")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def serving_output(self, output: TFBaseModelOutputWithPooling) -> TFBaseModelOutputWithPooling:
hidden_states = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attentions = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFBaseModelOutputWithPooling(
last_hidden_state=output.last_hidden_state,
pooler_output=output.pooler_output,
hidden_states=hidden_states,
attentions=attentions,
)
@add_start_docstrings("""Tapas Model with a `language modeling` head on top.""", TAPAS_START_DOCSTRING)
class TFTapasForMaskedLM(TFTapasPreTrainedModel, TFMaskedLanguageModelingLoss):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
if config.is_decoder:
logger.warning(
"If you want to use `TFTapasForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.tapas = TFTapasMainLayer(config, add_pooling_layer=False, name="tapas")
self.lm_head = TFTapasMLMHead(config, input_embeddings=self.tapas.embeddings, name="cls")
def get_lm_head(self) -> tf.keras.layers.Layer:
return self.lm_head.predictions
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFMaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[TFMaskedLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` or `np.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForMaskedLM
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasForMaskedLM.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> inputs = tokenizer(
... table=table, queries="How many [MASK] has George [MASK] played in?", return_tensors="tf"
... )
>>> labels = tokenizer(
... table=table, queries="How many movies has George Clooney played in?", return_tensors="tf"
... )["input_ids"]
>>> outputs = model(**inputs, labels=labels)
>>> logits = outputs.logits
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels=labels, logits=prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMaskedLMOutput(
loss=loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def serving_output(self, output: TFMaskedLMOutput) -> TFMaskedLMOutput:
hidden_states = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attentions = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFMaskedLMOutput(logits=output.logits, hidden_states=hidden_states, attentions=attentions)
class TFTapasComputeTokenLogits(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.temperature = config.temperature
# cell selection heads
with tf.name_scope("output"):
self.output_weights = self.add_weight(
name="output_weights",
shape=(config.hidden_size,),
dtype=tf.float32,
trainable=True,
initializer=tf.zeros_initializer()
if config.init_cell_selection_weights_to_zero
else tf.keras.initializers.TruncatedNormal(stddev=config.initializer_range),
)
self.output_bias = self.add_weight(
name="output_bias", shape=(), trainable=True, initializer=tf.zeros_initializer()
)
def call(self, sequence_output: tf.Tensor) -> tf.Tensor:
"""
Computes logits per token
Args:
sequence_output (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Also known as last_hidden_state. Sequence of hidden-states at the output of the last layer of the
model.
Returns:
logits (`tf.Tensor` of shape `(batch_size, sequence_length)`): Logits per token.
"""
logits = (tf.einsum("bsj,j->bs", sequence_output, self.output_weights) + self.output_bias) / self.temperature
return logits
class TFTapasComputeColumnLogits(tf.keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
with tf.name_scope("column_output"):
self.column_output_weights = self.add_weight(
name="column_output_weights",
shape=[config.hidden_size],
dtype=tf.float32,
trainable=True,
initializer=tf.zeros_initializer()
if config.init_cell_selection_weights_to_zero
else tf.keras.initializers.TruncatedNormal(stddev=config.initializer_range),
)
self.column_output_bias = self.add_weight(
name="column_output_bias", shape=(), trainable=True, initializer=tf.zeros_initializer()
)
def call(self, sequence_output, cell_index, cell_mask, allow_empty_column_selection) -> tf.Tensor:
"""
Computes the column logits.
Args:
sequence_output (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Also known as last_hidden_state. Sequence of hidden-states at the output of the last layer of the
model.
cell_index (`ProductIndexMap`):
Index that groups tokens into cells.
cell_mask (`tf.Tensor` of shape `(batch_size, max_num_rows * max_num_cols)`):
Mask for cells that exist in the table (i.e. that are not padding).
allow_empty_column_selection (`bool`):
Whether to allow not to select any column
Returns:
column_logits (`tf.Tensor`of shape `(batch_size, max_num_cols)`): Tensor containing the column logits for
every example in the batch.
"""
# First, compute the token logits (batch_size, seq_len) - without temperature
token_logits = tf.einsum("bsj,j->bs", sequence_output, self.column_output_weights) + self.column_output_bias
# Next, average the logits per cell (batch_size, max_num_cols*max_num_rows)
cell_logits, cell_logits_index = reduce_mean(token_logits, cell_index)
# Finally, average the logits per column (batch_size, max_num_cols)
column_index = cell_index.project_inner(cell_logits_index)
column_logits, out_index = reduce_sum(cell_logits * cell_mask, column_index)
cell_count, _ = reduce_sum(cell_mask, column_index)
column_logits /= cell_count + EPSILON_ZERO_DIVISION
# Mask columns that do not appear in the example.
is_padding = tf.logical_and(cell_count < 0.5, tf.not_equal(out_index.indices, 0))
column_logits += CLOSE_ENOUGH_TO_LOG_ZERO * tf.cast(is_padding, tf.float32)
if not allow_empty_column_selection:
column_logits += CLOSE_ENOUGH_TO_LOG_ZERO * tf.cast(tf.equal(out_index.indices, 0), tf.float32)
return column_logits
@add_start_docstrings(
"""
Tapas Model with a cell selection head and optional aggregation head on top for question-answering tasks on tables
(linear layers on top of the hidden-states output to compute `logits` and optional `logits_aggregation`), e.g. for
SQA, WTQ or WikiSQL-supervised tasks.
""",
TAPAS_START_DOCSTRING,
)
class TFTapasForQuestionAnswering(TFTapasPreTrainedModel):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
# base model
self.tapas = TFTapasMainLayer(config, name="tapas")
# dropout
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob)
self.compute_token_logits = TFTapasComputeTokenLogits(config, name="compute_token_logits")
self.compute_column_logits = TFTapasComputeColumnLogits(config, name="compute_column_logits")
if config.num_aggregation_labels > 0:
self.aggregation_classifier = tf.keras.layers.Dense(
config.num_aggregation_labels,
kernel_initializer=get_initializer(config.initializer_range),
name="aggregation_classifier",
)
self.config = config
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFTableQuestionAnsweringOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
table_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
aggregation_labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
float_answer: Optional[Union[np.ndarray, tf.Tensor]] = None,
numeric_values: Optional[Union[np.ndarray, tf.Tensor]] = None,
numeric_values_scale: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[TFTableQuestionAnsweringOutput, Tuple[tf.Tensor]]:
r"""
table_mask (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Mask for the table. Indicates which tokens belong to the table (1). Question tokens, table headers and
padding are 0.
labels (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Labels per token for computing the hierarchical cell selection loss. This encodes the positions of the
answer appearing in the table. Can be obtained using [`AutoTokenizer`].
- 1 for tokens that are **part of the answer**,
- 0 for tokens that are **not part of the answer**.
aggregation_labels (`tf.Tensor` of shape `(batch_size, )`, *optional*):
Aggregation function index for every example in the batch for computing the aggregation loss. Indices
should be in `[0, ..., config.num_aggregation_labels - 1]`. Only required in case of strong supervision for
aggregation (WikiSQL-supervised).
float_answer (`tf.Tensor` of shape `(batch_size, )`, *optional*):
Float answer for every example in the batch. Set to *float('nan')* for cell selection questions. Only
required in case of weak supervision (WTQ) to calculate the aggregate mask and regression loss.
numeric_values (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Numeric values of every token, NaN for tokens which are not numeric values. Can be obtained using
[`AutoTokenizer`]. Only required in case of weak supervision for aggregation (WTQ) to calculate the
regression loss.
numeric_values_scale (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Scale of the numeric values of every token. Can be obtained using [`AutoTokenizer`]. Only required in case
of weak supervision for aggregation (WTQ) to calculate the regression loss.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForQuestionAnswering
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-wtq")
>>> model = TapasForQuestionAnswering.from_pretrained("google/tapas-base-finetuned-wtq")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="tf")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> logits_aggregation = outputs.logits_aggregation
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
pooled_output = outputs[1]
sequence_output = self.dropout(sequence_output)
if input_ids is not None:
input_shape = shape_list(input_ids)
else:
input_shape = shape_list(inputs_embeds)[:-1]
# Construct indices for the table.
if token_type_ids is None:
token_type_ids = tf.fill(input_shape + [len(self.config.type_vocab_sizes)], 0)
token_types = [
"segment_ids",
"column_ids",
"row_ids",
"prev_labels",
"column_ranks",
"inv_column_ranks",
"numeric_relations",
]
row_ids = token_type_ids[:, :, token_types.index("row_ids")]
column_ids = token_type_ids[:, :, token_types.index("column_ids")]
# Construct indices for the table.
row_index = IndexMap(
indices=tf.minimum(tf.cast(row_ids, tf.int32), self.config.max_num_rows - 1),
num_segments=self.config.max_num_rows,
batch_dims=1,
)
col_index = IndexMap(
indices=tf.minimum(tf.cast(column_ids, tf.int32), self.config.max_num_columns - 1),
num_segments=self.config.max_num_columns,
batch_dims=1,
)
cell_index = ProductIndexMap(row_index, col_index)
# Masks.
input_shape = shape_list(input_ids) if input_ids is not None else shape_list(inputs_embeds)[:-1]
if attention_mask is None:
attention_mask = tf.ones(input_shape)
# Table cells only, without question tokens and table headers.
if table_mask is None:
table_mask = tf.where(row_ids > 0, tf.ones_like(row_ids), tf.zeros_like(row_ids))
# <float32>[batch_size, seq_length]
input_mask_float = tf.cast(attention_mask, tf.float32)
table_mask_float = tf.cast(table_mask, tf.float32)
# Mask for cells that exist in the table (i.e. that are not padding).
cell_mask, _ = reduce_mean(input_mask_float, cell_index)
# Compute logits per token. These are used to select individual cells.
logits = self.compute_token_logits(sequence_output)
# Compute logits per column. These are used to select a column.
column_logits = None
if self.config.select_one_column:
column_logits = self.compute_column_logits(
sequence_output, cell_index, cell_mask, self.config.allow_empty_column_selection
)
# Aggregate logits.
logits_aggregation = None
if self.config.num_aggregation_labels > 0:
logits_aggregation = self.aggregation_classifier(pooled_output)
# Total loss calculation
total_loss = tf.zeros(shape=(1,), dtype=tf.float32)
calculate_loss = False
if labels is not None:
calculate_loss = True
is_supervised = not self.config.num_aggregation_labels > 0 or not self.config.use_answer_as_supervision
# Semi-supervised cell selection in case of no aggregation:
# If the answer (the denotation) appears directly in the table we might
# select the answer without applying any aggregation function. There are
# some ambiguous cases, see utils._calculate_aggregate_mask for more info.
# `aggregate_mask` is 1 for examples where we chose to aggregate and 0
# for examples where we chose to select the answer directly.
# `labels` encodes the positions of the answer appearing in the table.
if is_supervised:
aggregate_mask = None
else:
if float_answer is not None:
assert (
shape_list(labels)[0] == shape_list(float_answer)[0]
), "Make sure the answers are a FloatTensor of shape (batch_size,)"
# <float32>[batch_size]
aggregate_mask = _calculate_aggregate_mask(
float_answer,
pooled_output,
self.config.cell_selection_preference,
labels,
self.aggregation_classifier,
)
else:
aggregate_mask = None
raise ValueError("You have to specify float answers in order to calculate the aggregate mask")
# Cell selection log-likelihood
if self.config.average_logits_per_cell:
logits_per_cell, _ = reduce_mean(logits, cell_index)
logits = gather(logits_per_cell, cell_index)
dist_per_token = tfp.distributions.Bernoulli(logits=logits)
# Compute cell selection loss per example.
selection_loss_per_example = None
if not self.config.select_one_column:
weight = tf.where(
labels == 0,
tf.ones_like(labels, dtype=tf.float32),
self.config.positive_label_weight * tf.ones_like(labels, dtype=tf.float32),
)
selection_loss_per_token = -dist_per_token.log_prob(labels) * weight
selection_loss_per_example = tf.reduce_sum(selection_loss_per_token * input_mask_float, axis=1) / (
tf.reduce_sum(input_mask_float, axis=1) + EPSILON_ZERO_DIVISION
)
else:
selection_loss_per_example, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
dist_per_token = tfp.distributions.Bernoulli(logits=logits)
# Supervised cell selection
if self.config.disable_per_token_loss:
pass
elif is_supervised:
total_loss += tf.reduce_mean(selection_loss_per_example)
else:
# For the not supervised case, do not assign loss for cell selection
total_loss += tf.reduce_mean(selection_loss_per_example * (1.0 - aggregate_mask))
# Semi-supervised regression loss and supervised loss for aggregations
if self.config.num_aggregation_labels > 0:
if is_supervised:
# Note that `aggregate_mask` is None if the setting is supervised.
if aggregation_labels is not None:
assert (
shape_list(labels)[0] == shape_list(aggregation_labels)[0]
), "Make sure the aggregation labels are a LongTensor of shape (batch_size,)"
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
else:
raise ValueError(
"You have to specify aggregation labels in order to calculate the aggregation loss"
)
else:
aggregation_labels = tf.zeros(shape_list(labels)[0], dtype=tf.int32)
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
if self.config.use_answer_as_supervision:
if numeric_values is not None and numeric_values_scale is not None:
assert shape_list(numeric_values) == shape_list(numeric_values_scale)
# Add regression loss for numeric answers which require aggregation.
answer_loss, large_answer_loss_mask = _calculate_regression_loss(
float_answer,
aggregate_mask,
dist_per_token,
numeric_values,
numeric_values_scale,
table_mask_float,
logits_aggregation,
self.config,
)
per_example_additional_loss += answer_loss
# Zero loss for examples with answer_loss > cutoff.
per_example_additional_loss *= large_answer_loss_mask
else:
raise ValueError(
"You have to specify numeric values and numeric values scale in order to calculate the"
" regression loss"
)
total_loss += tf.reduce_mean(per_example_additional_loss)
else:
# if no label ids are provided, set them to zeros in order to properly compute logits
labels = tf.zeros_like(logits)
_, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
if not return_dict:
output = (logits, logits_aggregation) + outputs[2:]
return ((total_loss,) + output) if calculate_loss else output
return TFTableQuestionAnsweringOutput(
loss=total_loss if calculate_loss else None,
logits=logits,
logits_aggregation=logits_aggregation,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def serving_output(self, output: TFTableQuestionAnsweringOutput) -> TFTableQuestionAnsweringOutput:
hidden_states = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attentions = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFTableQuestionAnsweringOutput(
logits=output.logits,
logits_aggregation=output.logits_aggregation,
hidden_states=hidden_states,
attentions=attentions,
)
@add_start_docstrings(
"""
Tapas Model with a sequence classification head on top (a linear layer on top of the pooled output), e.g. for table
entailment tasks, such as TabFact (Chen et al., 2020).
""",
TAPAS_START_DOCSTRING,
)
class TFTapasForSequenceClassification(TFTapasPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.tapas = TFTapasMainLayer(config, name="tapas")
self.dropout = tf.keras.layers.Dropout(config.hidden_dropout_prob, name="dropout")
self.classifier = tf.keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
@replace_return_docstrings(output_type=TFSequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[TFSequenceClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy). Note: this is called
"classification_class_index" in the original implementation.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForSequenceClassification
>>> import tensorflow as tf
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> model = TapasForSequenceClassification.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = [
... "There is only one actor who is 45 years old",
... "There are 3 actors which played in more than 60 movies",
... ]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="tf")
>>> labels = tf.convert_to_tensor([1, 0]) # 1 means entailed, 0 means refuted
>>> outputs = model(**inputs, labels=labels)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
pooled_output = self.dropout(inputs=pooled_output, training=training)
logits = self.classifier(inputs=pooled_output)
loss = None if labels is None else self.hf_compute_loss(labels=labels, logits=logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def serving_output(self, output: TFSequenceClassifierOutput) -> TFSequenceClassifierOutput:
hidden_states = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attentions = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFSequenceClassifierOutput(logits=output.logits, hidden_states=hidden_states, attentions=attentions)
""" TAPAS utilities."""
class AverageApproximationFunction(str, enum.Enum):
RATIO = "ratio"
FIRST_ORDER = "first_order"
SECOND_ORDER = "second_order"
# Beginning of everything related to segmented tensors
class IndexMap(object):
"""Index grouping entries within a tensor."""
def __init__(self, indices, num_segments, batch_dims=0):
"""
Creates an index.
Args:
indices: <int32> Tensor of indices, same shape as `values`.
num_segments: <int32> Scalar tensor, the number of segments. All elements
in a batched segmented tensor must have the same number of segments (although many segments can be empty).
batch_dims: Python integer, the number of batch dimensions. The first
`batch_dims` dimensions of a SegmentedTensor are treated as batch dimensions. Segments in different batch
elements are always distinct even if they have the same index.
"""
self.indices = tf.convert_to_tensor(indices)
self.num_segments = tf.convert_to_tensor(num_segments)
self.batch_dims = batch_dims
def batch_shape(self):
return tf.shape(self.indices)[: self.batch_dims]
class ProductIndexMap(IndexMap):
"""The product of two indices."""
def __init__(self, outer_index, inner_index):
"""
Combines indices i and j into pairs (i, j). The result is an index where each segment (i, j) is the
intersection of segments i and j. For example if the inputs represent table cells indexed by respectively rows
and columns the output will be a table indexed by (row, column) pairs, i.e. by cell. The implementation
combines indices {0, .., n - 1} and {0, .., m - 1} into {0, .., nm - 1}. The output has `num_segments` equal to
`outer_index.num_segements` * `inner_index.num_segments`.
Args:
outer_index: IndexMap.
inner_index: IndexMap, must have the same shape as `outer_index`.
"""
if outer_index.batch_dims != inner_index.batch_dims:
raise ValueError("outer_index.batch_dims and inner_index.batch_dims must be the same.")
super(ProductIndexMap, self).__init__(
indices=(
inner_index.indices
+ outer_index.indices * tf.cast(inner_index.num_segments, inner_index.indices.dtype)
),
num_segments=inner_index.num_segments * outer_index.num_segments,
batch_dims=inner_index.batch_dims,
)
self.outer_index = outer_index
self.inner_index = inner_index
def project_outer(self, index):
"""Projects an index with the same index set onto the outer components."""
return IndexMap(
indices=tf.math.floordiv(index.indices, self.inner_index.num_segments),
num_segments=self.outer_index.num_segments,
batch_dims=index.batch_dims,
)
def project_inner(self, index):
"""Projects an index with the same index set onto the inner components."""
return IndexMap(
indices=tf.math.floormod(index.indices, self.inner_index.num_segments),
num_segments=self.inner_index.num_segments,
batch_dims=index.batch_dims,
)
def gather(values, index, name="segmented_gather"):
"""
Gathers from `values` using the index map. For each element in the domain of the index map this operation looks up
a value for that index in `values`. Two elements from the same segment always get assigned the same value.
Args:
values: [B1, ..., Bn, num_segments, V1, ...] Tensor with segment values.
index: [B1, ..., Bn, I1, ..., Ik] IndexMap.
name: Name for the TensorFlow operation.
Returns:
[B1, ..., Bn, I1, ..., Ik, V1, ...] Tensor with the gathered values.
"""
return tf.gather(values, index.indices, batch_dims=index.batch_dims, name=name)
def flatten(index, name="segmented_flatten"):
"""
Flattens a batched index map to a 1d index map. This operation relabels the segments to keep batch elements
distinct. The k-th batch element will have indices shifted by `num_segments` * (k - 1). The result is a tensor with
`num_segments` multiplied by the number of elements in the batch.
Args:
index: IndexMap to flatten.
name: Name for the TensorFlow operation.
Returns:
The flattened IndexMap.
"""
batch_size = tf.reduce_prod(index.batch_shape())
offset = tf.range(batch_size) * index.num_segments
offset = tf.reshape(offset, index.batch_shape())
for _ in range(index.batch_dims, index.indices.shape.rank):
offset = tf.expand_dims(offset, -1)
indices = tf.cast(offset, index.indices.dtype) + index.indices
return IndexMap(indices=tf.reshape(indices, [-1]), num_segments=index.num_segments * batch_size, batch_dims=0)
def range_index_map(batch_shape, num_segments, name="range_index_map"):
"""
Constructs an index map equal to range(num_segments).
Args:
batch_shape (`tf.Tensor`):
Batch shape
num_segments (`int`):
Number of segments
name (`str`, *optional*, defaults to 'range_index_map'):
Name for the operation. Currently not used
Returns:
(`IndexMap`): IndexMap of shape batch_shape with elements equal to range(num_segments).
"""
batch_shape = tf.convert_to_tensor(batch_shape)
batch_shape.shape.assert_has_rank(1)
num_segments = tf.convert_to_tensor(num_segments)
num_segments.shape.assert_has_rank(0)
indices = tf.range(num_segments)
shape = tf.concat([tf.ones_like(batch_shape, dtype=tf.int32), tf.expand_dims(num_segments, axis=0)], axis=0)
indices = tf.reshape(indices, shape)
multiples = tf.concat([batch_shape, [1]], axis=0)
indices = tf.tile(indices, multiples)
return IndexMap(indices=indices, num_segments=num_segments, batch_dims=batch_shape.shape.as_list()[0])
def _segment_reduce(values, index, segment_reduce_fn, name):
"""
Applies a segment reduction segment-wise.
Args:
values (`tf.Tensor`):
Tensor with segment values.
index (`IndexMap`):
IndexMap.
segment_reduce_fn (`str`):
Name for the reduce operation. One of "sum", "mean", "max" or "min".
name (`str`):
Name for the operation. Currently not used
Returns:
(`IndexMap`): IndexMap of shape batch_shape with elements equal to range(num_segments).
"""
# Flatten the batch dimensions, as segments ops do not support batching.
# However if `values` has extra dimensions to the right keep them
# unflattened. Segmented ops support vector-valued operations.
flat_index = flatten(index)
vector_shape = tf.shape(values)[index.indices.shape.rank :]
flattened_shape = tf.concat([[-1], vector_shape], axis=0)
flat_values = tf.reshape(values, flattened_shape)
segment_means = segment_reduce_fn(
data=flat_values, segment_ids=flat_index.indices, num_segments=flat_index.num_segments
)
# Unflatten the values.
new_shape = tf.concat([index.batch_shape(), [index.num_segments], vector_shape], axis=0)
output_values = tf.reshape(segment_means, new_shape)
output_index = range_index_map(index.batch_shape(), index.num_segments)
return output_values, output_index
def reduce_mean(values, index, name="segmented_reduce_mean"):
"""
Averages a tensor over its segments. Outputs 0 for empty segments. This operations computes the mean over segments,
with support for:
- Batching using the first dimensions [B1, B2, ..., Bn]. Each element in a batch can have different indices.
- Vectorization using the last dimension [V1, V2, ...]. If they are present the output will be a mean of vectors
rather than scalars.
Only the middle dimensions [I1, ..., Ik] are reduced by the operation.
Args:
values: [B1, B2, ..., Bn, I1, .., Ik, V1, V2, ..] tensor of values to be
averaged.
index: IndexMap [B1, B2, ..., Bn, I1, .., Ik] index defining the segments.
name: Name for the TensorFlow ops.
Returns:
A pair (output_values, output_index) where `output_values` is a tensor of shape [B1, B2, ..., Bn, num_segments,
V1, V2, ..] and `index` is an IndexMap with shape [B1, B2, ..., Bn, num_segments].
"""
return _segment_reduce(values, index, tf.math.unsorted_segment_mean, name)
def reduce_sum(values, index, name="segmented_reduce_sum"):
"""
Sums a tensor over its segments. Outputs 0 for empty segments. This operations computes the sum over segments, with
support for:
- Batching using the first dimensions [B1, B2, ..., Bn]. Each element in a batch can have different indices.
- Vectorization using the last dimension [V1, V2, ...]. If they are present the output will be a sum of vectors
rather than scalars.
Only the middle dimensions [I1, ..., Ik] are reduced by the operation.
Args:
values: [B1, B2, ..., Bn, I1, .., Ik, V1, V2, ..] tensor of values to be
averaged.
index: IndexMap [B1, B2, ..., Bn, I1, .., Ik] index defining the segments.
name: Name for the TensorFlow ops.
Returns:
A pair (output_values, output_index) where `output_values` is a tensor of shape [B1, B2, ..., Bn, num_segments,
V1, V2, ..] and `index` is an IndexMap with shape [B1, B2, ..., Bn, num_segments].
"""
return _segment_reduce(values, index, tf.math.unsorted_segment_sum, name)
def reduce_max(values, index, name="segmented_reduce_max"):
"""
Computes the maximum over segments. This operations computes the maximum over segments, with support for:
- Batching using the first dimensions [B1, B2, ..., Bn]. Each element in a batch can have different indices.
- Vectorization using the last dimension [V1, V2, ...]. If they are present the output will be an element-wise
maximum of vectors rather than scalars.
Only the middle dimensions [I1, ..., Ik] are reduced by the operation.
Args:
values: [B1, B2, ..., Bn, I1, .., Ik, V1, V2, ..] tensor of values to be
averaged.
index: IndexMap [B1, B2, ..., Bn, I1, .., Ik] index defining the segments.
name: Name for the TensorFlow ops.
Returns:
A pair (output_values, output_index) where `output_values` is a tensor of shape [B1, B2, ..., Bn, num_segments,
V1, V2, ..] and `index` is an IndexMap with shape [B1, B2, ..., Bn, num_segments].
"""
return _segment_reduce(values, index, tf.math.unsorted_segment_max, name)
def reduce_min(values, index, name="segmented_reduce_min"):
"""Computes the minimum over segments."""
return _segment_reduce(values, index, tf.math.unsorted_segment_min, name)
def _single_column_cell_selection_loss(token_logits, column_logits, labels, cell_index, col_index, cell_mask):
"""
Computes the loss for cell selection constrained to a single column. The loss is a hierarchical log-likelihood. The
model first predicts a column and then selects cells within that column (conditioned on the column). Cells outside
the selected column are never selected.
Args:
token_logits (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Tensor containing the logits per token.
column_logits (`tf.Tensor` of shape `(batch_size, max_num_cols)`):
Tensor containing the logits per column.
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Labels per token.
cell_index (`ProductIndexMap`):
Index that groups tokens into cells.
col_index (`IndexMap`):
Index that groups tokens into columns.
cell_mask (`tf.Tensor` of shape `(batch_size, max_num_rows * max_num_cols)`):
Mask for cells that exist in the table (i.e. that are not padding).
Returns:
selection_loss_per_example (`tf.Tensor` of shape `(batch_size,)`): Loss for each example. logits (`tf.Tensor`
of shape `(batch_size, sequence_length)`): New logits which are only allowed to select cells in a single
column. Logits outside of the most likely column according to *column_logits* will be set to a very low value
(such that the probabilities are 0).
"""
# First find the column we should select. We use the column with maximum
# number of selected cells.
labels_per_column, _ = reduce_sum(tf.cast(labels, tf.float32), col_index)
column_label = tf.argmax(labels_per_column, axis=-1, output_type=tf.int32)
# Check if there are no selected cells in the column. In that case the model
# should predict the special column id 0, which means "select nothing".
no_cell_selected = tf.equal(tf.reduce_max(labels_per_column, axis=-1), 0)
column_label = tf.where(no_cell_selected, tf.zeros_like(column_label), column_label)
column_dist = tfp.distributions.Categorical(logits=column_logits)
column_loss_per_example = -column_dist.log_prob(column_label)
# Reduce the labels and logits to per-cell from per-token.
logits_per_cell, _ = reduce_mean(token_logits, cell_index)
labels_per_cell, labels_index = reduce_max(tf.cast(labels, tf.int32), cell_index)
# Mask for the selected column.
column_id_for_cells = cell_index.project_inner(labels_index).indices
column_mask = tf.cast(tf.equal(column_id_for_cells, tf.expand_dims(column_label, axis=1)), tf.float32)
# Compute the log-likelihood for cells, but only for the selected column.
cell_dist = tfp.distributions.Bernoulli(logits=logits_per_cell)
cell_log_prob = cell_dist.log_prob(labels_per_cell)
cell_loss = -tf.reduce_sum(cell_log_prob * column_mask * cell_mask, axis=1)
# We need to normalize the loss by the number of cells in the column.
cell_loss /= tf.reduce_sum(column_mask * cell_mask, axis=1) + EPSILON_ZERO_DIVISION
selection_loss_per_example = column_loss_per_example
selection_loss_per_example += tf.where(no_cell_selected, tf.zeros_like(selection_loss_per_example), cell_loss)
# Set the probs outside the selected column (selected by the *model*)
# to 0. This ensures backwards compatibility with models that select
# cells from multiple columns.
selected_column_id = tf.argmax(column_logits, axis=-1, output_type=tf.int32)
selected_column_mask = tf.cast(
tf.equal(column_id_for_cells, tf.expand_dims(selected_column_id, axis=-1)), tf.float32
)
# Never select cells with the special column id 0.
selected_column_mask = tf.where(
tf.equal(column_id_for_cells, 0), tf.zeros_like(selected_column_mask), selected_column_mask
)
logits_per_cell += CLOSE_ENOUGH_TO_LOG_ZERO * (1.0 - cell_mask * selected_column_mask)
logits = gather(logits_per_cell, cell_index)
return selection_loss_per_example, logits
def _calculate_aggregate_mask(answer, pooled_output, cell_selection_preference, labels, aggregation_classifier):
"""
Finds examples where the model should select cells with no aggregation.
Returns a mask that determines for which examples should the model select answers directly from the table, without
any aggregation function. If the answer is a piece of text the case is unambiguous as aggregation functions only
apply to numbers. If the answer is a number but does not appear in the table then we must use some aggregation
case. The ambiguous case is when the answer is a number that also appears in the table. In this case we use the
aggregation function probabilities predicted by the model to decide whether to select or aggregate. The threshold
for this is a hyperparameter *cell_selection_preference*
Args:
answer (`tf.Tensor` of shape `(batch_size, )`):
Answer for every example in the batch. Nan if there is no scalar answer.
pooled_output (`tf.Tensor` of shape `(batch_size, hidden_size)`):
Output of the pooler (BertPooler) on top of the encoder layer.
cell_selection_preference (`float`):
Preference for cell selection in ambiguous cases.
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Labels per token. aggregation_classifier (`torch.nn.Linear`): Aggregation head
Returns:
aggregate_mask (`tf.Tensor` of shape `(batch_size,)`): A mask set to 1 for examples that should use aggregation
functions.
"""
# tf.Tensor(batch_size,)
aggregate_mask_init = tf.cast(tf.logical_not(tf.math.is_nan(answer)), tf.float32)
logits_aggregation = aggregation_classifier(pooled_output)
dist_aggregation = tfp.distributions.Categorical(logits=logits_aggregation)
# Index 0 corresponds to "no aggregation".
aggregation_ops_total_mass = tf.reduce_sum(dist_aggregation.probs_parameter()[:, 1:], axis=1)
# Cell selection examples according to current model.
is_pred_cell_selection = aggregation_ops_total_mass <= cell_selection_preference
# Examples with non-empty cell selection supervision.
is_cell_supervision_available = tf.reduce_sum(labels, axis=1) > 0
aggregate_mask = tf.where(
tf.logical_and(is_pred_cell_selection, is_cell_supervision_available),
tf.zeros_like(aggregate_mask_init, dtype=tf.float32),
aggregate_mask_init,
)
aggregate_mask = tf.stop_gradient(aggregate_mask)
return aggregate_mask
def _calculate_aggregation_loss_known(
logits_aggregation, aggregate_mask, aggregation_labels, use_answer_as_supervision, num_aggregation_labels
):
"""
Calculates aggregation loss when its type is known during training.
In the weakly supervised setting, the only known information is that for cell selection examples, "no aggregation"
should be predicted. For other examples (those that require aggregation), no loss is accumulated. In the setting
where aggregation type is always known, standard cross entropy loss is accumulated for all examples
Args:
logits_aggregation (`tf.Tensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
aggregate_mask (`tf.Tensor` of shape `(batch_size, )`):
A mask set to 1 for examples that should use aggregation functions.
aggregation_labels (`tf.Tensor` of shape `(batch_size, )`):
Aggregation function id for every example in the batch.
use_answer_as_supervision (`bool`, *optional*):
Whether to use the answer as the only supervision for aggregation examples.
num_aggregation_labels (`int`, *optional*, defaults to 0):
The number of aggregation operators to predict.
Returns:
aggregation_loss_known (`tf.Tensor` of shape `(batch_size,)`): Aggregation loss (when its type is known during
training) per example.
"""
if use_answer_as_supervision:
# Prepare "no aggregation" targets for cell selection examples.
target_aggregation = tf.zeros_like(aggregate_mask, dtype=tf.int32)
else:
# Use aggregation supervision as the target.
target_aggregation = aggregation_labels
one_hot_labels = tf.one_hot(target_aggregation, depth=num_aggregation_labels, dtype=tf.float32)
log_probs = tf.nn.log_softmax(logits_aggregation, axis=-1)
# <float32>[batch_size]
per_example_aggregation_intermediate = -tf.reduce_sum(one_hot_labels * log_probs, axis=-1)
if use_answer_as_supervision:
# Accumulate loss only for examples requiring cell selection
# (no aggregation).
return per_example_aggregation_intermediate * (1 - aggregate_mask)
else:
return per_example_aggregation_intermediate
def _calculate_aggregation_loss_unknown(logits_aggregation, aggregate_mask):
"""
Calculates aggregation loss in the case of answer supervision.
Args:
logits_aggregation (`tf.Tensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
aggregate_mask (`tf.Tensor` of shape `(batch_size, )`):
A mask set to 1 for examples that should use aggregation functions
Returns:
aggregation_loss_unknown (`tf.Tensor` of shape `(batch_size,)`): Aggregation loss (in case of answer
supervision) per example.
"""
dist_aggregation = tfp.distributions.Categorical(logits=logits_aggregation)
# Index 0 corresponds to "no aggregation".
aggregation_ops_total_mass = tf.reduce_sum(dist_aggregation.probs_parameter()[:, 1:], axis=1)
# Predict some aggregation in case of an answer that needs aggregation.
# This increases the probability of all aggregation functions, in a way
# similar to MML, but without considering whether the function gives the
# correct answer.
return -tf.math.log(aggregation_ops_total_mass) * aggregate_mask
def _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
use_answer_as_supervision,
num_aggregation_labels,
aggregation_loss_weight,
):
"""
Calculates the aggregation loss per example.
Args:
logits_aggregation (`tf.Tensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
aggregate_mask (`tf.Tensor` of shape `(batch_size, )`):
A mask set to 1 for examples that should use aggregation functions.
aggregation_labels (`tf.Tensor` of shape `(batch_size, )`):
Aggregation function id for every example in the batch.
use_answer_as_supervision (`bool`, *optional*):
Whether to use the answer as the only supervision for aggregation examples.
num_aggregation_labels (`int`, *optional*, defaults to 0):
The number of aggregation operators to predict.
aggregation_loss_weight (`float`, *optional*, defaults to 1.0):
Importance weight for the aggregation loss.
Returns:
aggregation_loss (`tf.Tensor` of shape `(batch_size,)`): Aggregation loss per example.
"""
per_example_aggregation_loss = _calculate_aggregation_loss_known(
logits_aggregation, aggregate_mask, aggregation_labels, use_answer_as_supervision, num_aggregation_labels
)
if use_answer_as_supervision:
# Add aggregation loss for numeric answers that need aggregation.
per_example_aggregation_loss += _calculate_aggregation_loss_unknown(logits_aggregation, aggregate_mask)
return aggregation_loss_weight * per_example_aggregation_loss
def _calculate_expected_result(
dist_per_cell, numeric_values, numeric_values_scale, input_mask_float, logits_aggregation, config
):
"""
Calculates the expected result given cell and aggregation probabilities.
Args:
dist_per_cell (`tfp.distributions.Bernoulli`):
Cell selection distribution for each cell.
numeric_values (`tf.Tensor` of shape `(batch_size, seq_length)`):
Numeric values of every token. Nan for tokens which are not numeric values.
numeric_values_scale (`tf.Tensor` of shape `(batch_size, seq_length)`):
Scale of the numeric values of every token.
input_mask_float (`tf.Tensor` of shape `(batch_size, seq_length)`):
Mask for the table, without question tokens and table headers.
logits_aggregation (`tf.Tensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
config ([`TapasConfig`]):
Model configuration class with all the hyperparameters of the model
Returns:
expected_result (`tf.Tensor` of shape `(batch_size,)`): The expected result per example.
"""
if config.use_gumbel_for_cells:
gumbel_dist = tfp.distributions.RelaxedBernoulli(
# The token logits where already divided by the temperature and used for
# computing cell selection errors so we need to multiply it again here
config.temperature,
logits=dist_per_cell.logits_parameter() * config.temperature,
)
scaled_probability_per_cell = gumbel_dist.sample()
else:
scaled_probability_per_cell = dist_per_cell.probs_parameter()
# <float32>[batch_size, seq_length]
scaled_probability_per_cell = (scaled_probability_per_cell / numeric_values_scale) * input_mask_float
count_result = tf.reduce_sum(scaled_probability_per_cell, axis=1)
numeric_values_masked = tf.where(
tf.math.is_nan(numeric_values), tf.zeros_like(numeric_values), numeric_values
) # Mask non-numeric table values to zero.
sum_result = tf.reduce_sum(scaled_probability_per_cell * numeric_values_masked, axis=1)
avg_approximation = config.average_approximation_function
if avg_approximation == AverageApproximationFunction.RATIO:
average_result = sum_result / (count_result + EPSILON_ZERO_DIVISION)
elif avg_approximation == AverageApproximationFunction.FIRST_ORDER:
# The sum of all probabilities exept that correspond to other cells
ex = tf.reduce_sum(scaled_probability_per_cell, axis=1, keepdims=True) - scaled_probability_per_cell + 1
average_result = tf.reduce_sum(numeric_values_masked * scaled_probability_per_cell / ex, axis=1)
elif avg_approximation == AverageApproximationFunction.SECOND_ORDER:
# The sum of all probabilities exept that correspond to other cells
ex = tf.reduce_sum(scaled_probability_per_cell, axis=1, keepdims=True) - scaled_probability_per_cell + 1
pointwise_var = scaled_probability_per_cell * (1 - scaled_probability_per_cell)
var = tf.reduce_sum(pointwise_var, axis=1, keepdims=True) - pointwise_var
multiplier = (var / tf.math.square(ex) + 1) / ex
average_result = tf.reduce_sum(numeric_values_masked * scaled_probability_per_cell * multiplier, axis=1)
else:
raise ValueError("Invalid average_approximation_function: %s", config.average_approximation_function)
if config.use_gumbel_for_aggregation:
gumbel_dist = tfp.distributions.RelaxedOneHotCategorical(
config.aggregation_temperature, logits=logits_aggregation[:, 1:]
)
# <float32>[batch_size, num_aggregation_labels - 1]
aggregation_op_only_probs = gumbel_dist.sample()
else:
# <float32>[batch_size, num_aggregation_labels - 1]
aggregation_op_only_probs = stable_softmax(logits_aggregation[:, 1:] / config.aggregation_temperature, axis=-1)
all_results = tf.concat(
[
tf.expand_dims(sum_result, axis=1),
tf.expand_dims(average_result, axis=1),
tf.expand_dims(count_result, axis=1),
],
axis=1,
)
expected_result = tf.reduce_sum(all_results * aggregation_op_only_probs, axis=1)
return expected_result
def _calculate_regression_loss(
answer,
aggregate_mask,
dist_per_cell,
numeric_values,
numeric_values_scale,
input_mask_float,
logits_aggregation,
config,
):
"""
Calculates the regression loss per example.
Args:
answer (`tf.Tensor` of shape `(batch_size,)`):
Answer for every example in the batch. Nan if there is no scalar answer.
aggregate_mask (`tf.Tensor` of shape `(batch_size,)`):
A mask set to 1 for examples that should use aggregation functions.
dist_per_cell (`torch.distributions.Bernoulli`):
Cell selection distribution for each cell.
numeric_values (`tf.Tensor` of shape `(batch_size, seq_length)`):
Numeric values of every token. Nan for tokens which are not numeric values.
numeric_values_scale (`tf.Tensor` of shape `(batch_size, seq_length)`):
Scale of the numeric values of every token.
input_mask_float (`tf.Tensor` of shape `(batch_size, seq_length)`):
Mask for the table, without question tokens and table headers.
logits_aggregation (`tf.Tensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
config ([`TapasConfig`]):
Model configuration class with all the parameters of the model
Returns:
per_example_answer_loss_scaled (`tf.Tensor` of shape `(batch_size,)`): Scales answer loss for each example in
the batch. large_answer_loss_mask (`tf.Tensor` of shape `(batch_size,)`): A mask which is 1 for examples for
which their answer loss is larger than the answer_loss_cutoff.
"""
# float32 (batch_size,)
expected_result = _calculate_expected_result(
dist_per_cell, numeric_values, numeric_values_scale, input_mask_float, logits_aggregation, config
)
# <float32>[batch_size]
answer_masked = tf.where(tf.math.is_nan(answer), tf.zeros_like(answer), answer)
if config.use_normalized_answer_loss:
normalizer = tf.stop_gradient(
tf.math.maximum(tf.math.abs(expected_result), tf.math.abs(answer_masked)) + EPSILON_ZERO_DIVISION
)
normalized_answer_masked = answer_masked / normalizer
normalized_expected_result = expected_result / normalizer
per_example_answer_loss = tf.compat.v1.losses.huber_loss(
normalized_answer_masked * aggregate_mask,
normalized_expected_result * aggregate_mask,
delta=tf.cast(1.0, tf.float32),
reduction=tf.losses.Reduction.NONE,
)
else:
per_example_answer_loss = tf.compat.v1.losses.huber_loss(
answer_masked * aggregate_mask,
expected_result * aggregate_mask,
delta=tf.cast(config.huber_loss_delta, tf.float32),
reduction=tf.losses.Reduction.NONE,
)
if config.answer_loss_cutoff is None:
large_answer_loss_mask = tf.ones_like(per_example_answer_loss, dtype=tf.float32)
else:
large_answer_loss_mask = tf.where(
per_example_answer_loss > config.answer_loss_cutoff,
tf.zeros_like(per_example_answer_loss, dtype=tf.float32),
tf.ones_like(per_example_answer_loss, dtype=tf.float32),
)
per_example_answer_loss_scaled = config.answer_loss_importance * (per_example_answer_loss * aggregate_mask)
return per_example_answer_loss_scaled, large_answer_loss_mask
|
27182812/ChatGLM-LLaMA-chinese-insturct | 12,900 | src/transformers/models/tapas/configuration_tapas.py | # coding=utf-8
# Copyright 2020 Google Research and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
TAPAS configuration. Based on the BERT configuration with added parameters.
Hyperparameters are taken from run_task_main.py and hparam_utils.py of the original implementation. URLS:
- https://github.com/google-research/tapas/blob/master/tapas/run_task_main.py
- https://github.com/google-research/tapas/blob/master/tapas/utils/hparam_utils.py
"""
from ...configuration_utils import PretrainedConfig
TAPAS_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"google/tapas-base-finetuned-sqa": (
"https://huggingface.co/google/tapas-base-finetuned-sqa/resolve/main/config.json"
),
"google/tapas-base-finetuned-wtq": (
"https://huggingface.co/google/tapas-base-finetuned-wtq/resolve/main/config.json"
),
"google/tapas-base-finetuned-wikisql-supervised": (
"https://huggingface.co/google/tapas-base-finetuned-wikisql-supervised/resolve/main/config.json"
),
"google/tapas-base-finetuned-tabfact": (
"https://huggingface.co/google/tapas-base-finetuned-tabfact/resolve/main/config.json"
),
}
class TapasConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`TapasModel`]. It is used to instantiate a TAPAS
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the TAPAS
[google/tapas-base-finetuned-sqa](https://huggingface.co/google/tapas-base-finetuned-sqa) architecture.
Configuration objects inherit from [`PreTrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Hyperparameters additional to BERT are taken from run_task_main.py and hparam_utils.py of the original
implementation. Original implementation available at https://github.com/google-research/tapas/tree/master.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the TAPAS model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`TapasModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `Callable`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"swish"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 1024):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_sizes (`List[int]`, *optional*, defaults to `[3, 256, 256, 2, 256, 256, 10]`):
The vocabulary sizes of the `token_type_ids` passed when calling [`TapasModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
positive_label_weight (`float`, *optional*, defaults to 10.0):
Weight for positive labels.
num_aggregation_labels (`int`, *optional*, defaults to 0):
The number of aggregation operators to predict.
aggregation_loss_weight (`float`, *optional*, defaults to 1.0):
Importance weight for the aggregation loss.
use_answer_as_supervision (`bool`, *optional*):
Whether to use the answer as the only supervision for aggregation examples.
answer_loss_importance (`float`, *optional*, defaults to 1.0):
Importance weight for the regression loss.
use_normalized_answer_loss (`bool`, *optional*, defaults to `False`):
Whether to normalize the answer loss by the maximum of the predicted and expected value.
huber_loss_delta (`float`, *optional*):
Delta parameter used to calculate the regression loss.
temperature (`float`, *optional*, defaults to 1.0):
Value used to control (OR change) the skewness of cell logits probabilities.
aggregation_temperature (`float`, *optional*, defaults to 1.0):
Scales aggregation logits to control the skewness of probabilities.
use_gumbel_for_cells (`bool`, *optional*, defaults to `False`):
Whether to apply Gumbel-Softmax to cell selection.
use_gumbel_for_aggregation (`bool`, *optional*, defaults to `False`):
Whether to apply Gumbel-Softmax to aggregation selection.
average_approximation_function (`string`, *optional*, defaults to `"ratio"`):
Method to calculate the expected average of cells in the weak supervision case. One of `"ratio"`,
`"first_order"` or `"second_order"`.
cell_selection_preference (`float`, *optional*):
Preference for cell selection in ambiguous cases. Only applicable in case of weak supervision for
aggregation (WTQ, WikiSQL). If the total mass of the aggregation probabilities (excluding the "NONE"
operator) is higher than this hyperparameter, then aggregation is predicted for an example.
answer_loss_cutoff (`float`, *optional*):
Ignore examples with answer loss larger than cutoff.
max_num_rows (`int`, *optional*, defaults to 64):
Maximum number of rows.
max_num_columns (`int`, *optional*, defaults to 32):
Maximum number of columns.
average_logits_per_cell (`bool`, *optional*, defaults to `False`):
Whether to average logits per cell.
select_one_column (`bool`, *optional*, defaults to `True`):
Whether to constrain the model to only select cells from a single column.
allow_empty_column_selection (`bool`, *optional*, defaults to `False`):
Whether to allow not to select any column.
init_cell_selection_weights_to_zero (`bool`, *optional*, defaults to `False`):
Whether to initialize cell selection weights to 0 so that the initial probabilities are 50%.
reset_position_index_per_cell (`bool`, *optional*, defaults to `True`):
Whether to restart position indexes at every cell (i.e. use relative position embeddings).
disable_per_token_loss (`bool`, *optional*, defaults to `False`):
Whether to disable any (strong or weak) supervision on cells.
aggregation_labels (`Dict[int, label]`, *optional*):
The aggregation labels used to aggregate the results. For example, the WTQ models have the following
aggregation labels: `{0: "NONE", 1: "SUM", 2: "AVERAGE", 3: "COUNT"}`
no_aggregation_label_index (`int`, *optional*):
If the aggregation labels are defined and one of these labels represents "No aggregation", this should be
set to its index. For example, the WTQ models have the "NONE" aggregation label at index 0, so that value
should be set to 0 for these models.
Example:
```python
>>> from transformers import TapasModel, TapasConfig
>>> # Initializing a default (SQA) Tapas configuration
>>> configuration = TapasConfig()
>>> # Initializing a model from the configuration
>>> model = TapasModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "tapas"
def __init__(
self,
vocab_size=30522,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=1024,
type_vocab_sizes=[3, 256, 256, 2, 256, 256, 10],
initializer_range=0.02,
layer_norm_eps=1e-12,
pad_token_id=0,
positive_label_weight=10.0,
num_aggregation_labels=0,
aggregation_loss_weight=1.0,
use_answer_as_supervision=None,
answer_loss_importance=1.0,
use_normalized_answer_loss=False,
huber_loss_delta=None,
temperature=1.0,
aggregation_temperature=1.0,
use_gumbel_for_cells=False,
use_gumbel_for_aggregation=False,
average_approximation_function="ratio",
cell_selection_preference=None,
answer_loss_cutoff=None,
max_num_rows=64,
max_num_columns=32,
average_logits_per_cell=False,
select_one_column=True,
allow_empty_column_selection=False,
init_cell_selection_weights_to_zero=False,
reset_position_index_per_cell=True,
disable_per_token_loss=False,
aggregation_labels=None,
no_aggregation_label_index=None,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, **kwargs)
# BERT hyperparameters (with updated max_position_embeddings and type_vocab_sizes)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.type_vocab_sizes = type_vocab_sizes
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
# Fine-tuning task hyperparameters
self.positive_label_weight = positive_label_weight
self.num_aggregation_labels = num_aggregation_labels
self.aggregation_loss_weight = aggregation_loss_weight
self.use_answer_as_supervision = use_answer_as_supervision
self.answer_loss_importance = answer_loss_importance
self.use_normalized_answer_loss = use_normalized_answer_loss
self.huber_loss_delta = huber_loss_delta
self.temperature = temperature
self.aggregation_temperature = aggregation_temperature
self.use_gumbel_for_cells = use_gumbel_for_cells
self.use_gumbel_for_aggregation = use_gumbel_for_aggregation
self.average_approximation_function = average_approximation_function
self.cell_selection_preference = cell_selection_preference
self.answer_loss_cutoff = answer_loss_cutoff
self.max_num_rows = max_num_rows
self.max_num_columns = max_num_columns
self.average_logits_per_cell = average_logits_per_cell
self.select_one_column = select_one_column
self.allow_empty_column_selection = allow_empty_column_selection
self.init_cell_selection_weights_to_zero = init_cell_selection_weights_to_zero
self.reset_position_index_per_cell = reset_position_index_per_cell
self.disable_per_token_loss = disable_per_token_loss
# Aggregation hyperparameters
self.aggregation_labels = aggregation_labels
self.no_aggregation_label_index = no_aggregation_label_index
if isinstance(self.aggregation_labels, dict):
self.aggregation_labels = {int(k): v for k, v in aggregation_labels.items()}
|
27182812/ChatGLM-LLaMA-chinese-insturct | 120,544 | src/transformers/models/tapas/tokenization_tapas.py | # coding=utf-8
# Copyright 2020 Google Research and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Tokenization class for TAPAS model."""
import collections
import datetime
import enum
import itertools
import math
import os
import re
import unicodedata
from dataclasses import dataclass
from typing import Callable, Dict, Generator, List, Optional, Text, Tuple, Union
import numpy as np
from ...tokenization_utils import PreTrainedTokenizer, _is_control, _is_punctuation, _is_whitespace
from ...tokenization_utils_base import (
ENCODE_KWARGS_DOCSTRING,
BatchEncoding,
EncodedInput,
PreTokenizedInput,
TextInput,
)
from ...utils import ExplicitEnum, PaddingStrategy, TensorType, add_end_docstrings, is_pandas_available, logging
if is_pandas_available():
import pandas as pd
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
# large models
"google/tapas-large-finetuned-sqa": (
"https://huggingface.co/google/tapas-large-finetuned-sqa/resolve/main/vocab.txt"
),
"google/tapas-large-finetuned-wtq": (
"https://huggingface.co/google/tapas-large-finetuned-wtq/resolve/main/vocab.txt"
),
"google/tapas-large-finetuned-wikisql-supervised": (
"https://huggingface.co/google/tapas-large-finetuned-wikisql-supervised/resolve/main/vocab.txt"
),
"google/tapas-large-finetuned-tabfact": (
"https://huggingface.co/google/tapas-large-finetuned-tabfact/resolve/main/vocab.txt"
),
# base models
"google/tapas-base-finetuned-sqa": (
"https://huggingface.co/google/tapas-base-finetuned-sqa/resolve/main/vocab.txt"
),
"google/tapas-base-finetuned-wtq": (
"https://huggingface.co/google/tapas-base-finetuned-wtq/resolve/main/vocab.txt"
),
"google/tapas-base-finetuned-wikisql-supervised": (
"https://huggingface.co/google/tapas-base-finetuned-wikisql-supervised/resolve/main/vocab.txt"
),
"google/tapas-base-finetuned-tabfact": (
"https://huggingface.co/google/tapas-base-finetuned-tabfact/resolve/main/vocab.txt"
),
# medium models
"google/tapas-medium-finetuned-sqa": (
"https://huggingface.co/google/tapas-medium-finetuned-sqa/resolve/main/vocab.txt"
),
"google/tapas-medium-finetuned-wtq": (
"https://huggingface.co/google/tapas-medium-finetuned-wtq/resolve/main/vocab.txt"
),
"google/tapas-medium-finetuned-wikisql-supervised": (
"https://huggingface.co/google/tapas-medium-finetuned-wikisql-supervised/resolve/main/vocab.txt"
),
"google/tapas-medium-finetuned-tabfact": (
"https://huggingface.co/google/tapas-medium-finetuned-tabfact/resolve/main/vocab.txt"
),
# small models
"google/tapas-small-finetuned-sqa": (
"https://huggingface.co/google/tapas-small-finetuned-sqa/resolve/main/vocab.txt"
),
"google/tapas-small-finetuned-wtq": (
"https://huggingface.co/google/tapas-small-finetuned-wtq/resolve/main/vocab.txt"
),
"google/tapas-small-finetuned-wikisql-supervised": (
"https://huggingface.co/google/tapas-small-finetuned-wikisql-supervised/resolve/main/vocab.txt"
),
"google/tapas-small-finetuned-tabfact": (
"https://huggingface.co/google/tapas-small-finetuned-tabfact/resolve/main/vocab.txt"
),
# tiny models
"google/tapas-tiny-finetuned-sqa": (
"https://huggingface.co/google/tapas-tiny-finetuned-sqa/resolve/main/vocab.txt"
),
"google/tapas-tiny-finetuned-wtq": (
"https://huggingface.co/google/tapas-tiny-finetuned-wtq/resolve/main/vocab.txt"
),
"google/tapas-tiny-finetuned-wikisql-supervised": (
"https://huggingface.co/google/tapas-tiny-finetuned-wikisql-supervised/resolve/main/vocab.txt"
),
"google/tapas-tiny-finetuned-tabfact": (
"https://huggingface.co/google/tapas-tiny-finetuned-tabfact/resolve/main/vocab.txt"
),
# mini models
"google/tapas-mini-finetuned-sqa": (
"https://huggingface.co/google/tapas-mini-finetuned-sqa/resolve/main/vocab.txt"
),
"google/tapas-mini-finetuned-wtq": (
"https://huggingface.co/google/tapas-mini-finetuned-wtq/resolve/main/vocab.txt"
),
"google/tapas-mini-finetuned-wikisql-supervised": (
"https://huggingface.co/google/tapas-mini-finetuned-wikisql-supervised/resolve/main/vocab.txt"
),
"google/tapas-mini-finetuned-tabfact": (
"https://huggingface.co/google/tapas-mini-finetuned-tabfact/resolve/main/vocab.txt"
),
}
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {name: 512 for name in PRETRAINED_VOCAB_FILES_MAP.keys()}
PRETRAINED_INIT_CONFIGURATION = {name: {"do_lower_case": True} for name in PRETRAINED_VOCAB_FILES_MAP.keys()}
class TapasTruncationStrategy(ExplicitEnum):
"""
Possible values for the `truncation` argument in [`~TapasTokenizer.__call__`]. Useful for tab-completion in an IDE.
"""
DROP_ROWS_TO_FIT = "drop_rows_to_fit"
DO_NOT_TRUNCATE = "do_not_truncate"
TableValue = collections.namedtuple("TokenValue", ["token", "column_id", "row_id"])
@dataclass(frozen=True)
class TokenCoordinates:
column_index: int
row_index: int
token_index: int
@dataclass
class TokenizedTable:
rows: List[List[List[Text]]]
selected_tokens: List[TokenCoordinates]
@dataclass(frozen=True)
class SerializedExample:
tokens: List[Text]
column_ids: List[int]
row_ids: List[int]
segment_ids: List[int]
def _is_inner_wordpiece(token: Text):
return token.startswith("##")
def load_vocab(vocab_file):
"""Loads a vocabulary file into a dictionary."""
vocab = collections.OrderedDict()
with open(vocab_file, "r", encoding="utf-8") as reader:
tokens = reader.readlines()
for index, token in enumerate(tokens):
token = token.rstrip("\n")
vocab[token] = index
return vocab
def whitespace_tokenize(text):
"""Runs basic whitespace cleaning and splitting on a piece of text."""
text = text.strip()
if not text:
return []
tokens = text.split()
return tokens
TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING = r"""
add_special_tokens (`bool`, *optional*, defaults to `True`):
Whether or not to encode the sequences with the special tokens relative to their model.
padding (`bool`, `str` or [`~utils.PaddingStrategy`], *optional*, defaults to `False`):
Activates and controls padding. Accepts the following values:
- `True` or `'longest'`: Pad to the longest sequence in the batch (or no padding if only a single
sequence if provided).
- `'max_length'`: Pad to a maximum length specified with the argument `max_length` or to the maximum
acceptable input length for the model if that argument is not provided.
- `False` or `'do_not_pad'` (default): No padding (i.e., can output a batch with sequences of different
lengths).
truncation (`bool`, `str` or [`TapasTruncationStrategy`], *optional*, defaults to `False`):
Activates and controls truncation. Accepts the following values:
- `True` or `'drop_rows_to_fit'`: Truncate to a maximum length specified with the argument `max_length`
or to the maximum acceptable input length for the model if that argument is not provided. This will
truncate row by row, removing rows from the table.
- `False` or `'do_not_truncate'` (default): No truncation (i.e., can output batch with sequence lengths
greater than the model maximum admissible input size).
max_length (`int`, *optional*):
Controls the maximum length to use by one of the truncation/padding parameters.
If left unset or set to `None`, this will use the predefined model maximum length if a maximum length
is required by one of the truncation/padding parameters. If the model has no specific maximum input
length (like XLNet) truncation/padding to a maximum length will be deactivated.
is_split_into_words (`bool`, *optional*, defaults to `False`):
Whether or not the input is already pre-tokenized (e.g., split into words). If set to `True`, the
tokenizer assumes the input is already split into words (for instance, by splitting it on whitespace)
which it will tokenize. This is useful for NER or token classification.
pad_to_multiple_of (`int`, *optional*):
If set will pad the sequence to a multiple of the provided value. This is especially useful to enable
the use of Tensor Cores on NVIDIA hardware with compute capability `>= 7.5` (Volta).
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors instead of list of python integers. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return Numpy `np.ndarray` objects.
"""
class TapasTokenizer(PreTrainedTokenizer):
r"""
Construct a TAPAS tokenizer. Based on WordPiece. Flattens a table and one or more related sentences to be used by
TAPAS models.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods. [`TapasTokenizer`] creates several token type ids to
encode tabular structure. To be more precise, it adds 7 token type ids, in the following order: `segment_ids`,
`column_ids`, `row_ids`, `prev_labels`, `column_ranks`, `inv_column_ranks` and `numeric_relations`:
- segment_ids: indicate whether a token belongs to the question (0) or the table (1). 0 for special tokens and
padding.
- column_ids: indicate to which column of the table a token belongs (starting from 1). Is 0 for all question
tokens, special tokens and padding.
- row_ids: indicate to which row of the table a token belongs (starting from 1). Is 0 for all question tokens,
special tokens and padding. Tokens of column headers are also 0.
- prev_labels: indicate whether a token was (part of) an answer to the previous question (1) or not (0). Useful in
a conversational setup (such as SQA).
- column_ranks: indicate the rank of a table token relative to a column, if applicable. For example, if you have a
column "number of movies" with values 87, 53 and 69, then the column ranks of these tokens are 3, 1 and 2
respectively. 0 for all question tokens, special tokens and padding.
- inv_column_ranks: indicate the inverse rank of a table token relative to a column, if applicable. For example, if
you have a column "number of movies" with values 87, 53 and 69, then the inverse column ranks of these tokens are
1, 3 and 2 respectively. 0 for all question tokens, special tokens and padding.
- numeric_relations: indicate numeric relations between the question and the tokens of the table. 0 for all
question tokens, special tokens and padding.
[`TapasTokenizer`] runs end-to-end tokenization on a table and associated sentences: punctuation splitting and
wordpiece.
Args:
vocab_file (`str`):
File containing the vocabulary.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
do_basic_tokenize (`bool`, *optional*, defaults to `True`):
Whether or not to do basic tokenization before WordPiece.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
unk_token (`str`, *optional*, defaults to `"[UNK]"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"[PAD]"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
empty_token (`str`, *optional*, defaults to `"[EMPTY]"`):
The token used for empty cell values in a table. Empty cell values include "", "n/a", "nan" and "?".
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters. This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
cell_trim_length (`int`, *optional*, defaults to -1):
If > 0: Trim cells so that the length is <= this value. Also disables further cell trimming, should thus be
used with `truncation` set to `True`.
max_column_id (`int`, *optional*):
Max column id to extract.
max_row_id (`int`, *optional*):
Max row id to extract.
strip_column_names (`bool`, *optional*, defaults to `False`):
Whether to add empty strings instead of column names.
update_answer_coordinates (`bool`, *optional*, defaults to `False`):
Whether to recompute the answer coordinates from the answer text.
min_question_length (`int`, *optional*):
Minimum length of each question in terms of tokens (will be skipped otherwise).
max_question_length (`int`, *optional*):
Maximum length of each question in terms of tokens (will be skipped otherwise).
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
def __init__(
self,
vocab_file,
do_lower_case=True,
do_basic_tokenize=True,
never_split=None,
unk_token="[UNK]",
sep_token="[SEP]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
empty_token="[EMPTY]",
tokenize_chinese_chars=True,
strip_accents=None,
cell_trim_length: int = -1,
max_column_id: int = None,
max_row_id: int = None,
strip_column_names: bool = False,
update_answer_coordinates: bool = False,
min_question_length=None,
max_question_length=None,
model_max_length: int = 512,
additional_special_tokens: Optional[List[str]] = None,
**kwargs,
):
if not is_pandas_available():
raise ImportError("Pandas is required for the TAPAS tokenizer.")
if additional_special_tokens is not None:
if empty_token not in additional_special_tokens:
additional_special_tokens.append(empty_token)
else:
additional_special_tokens = [empty_token]
super().__init__(
do_lower_case=do_lower_case,
do_basic_tokenize=do_basic_tokenize,
never_split=never_split,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
empty_token=empty_token,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
cell_trim_length=cell_trim_length,
max_column_id=max_column_id,
max_row_id=max_row_id,
strip_column_names=strip_column_names,
update_answer_coordinates=update_answer_coordinates,
min_question_length=min_question_length,
max_question_length=max_question_length,
model_max_length=model_max_length,
additional_special_tokens=additional_special_tokens,
**kwargs,
)
if not os.path.isfile(vocab_file):
raise ValueError(
f"Can't find a vocabulary file at path '{vocab_file}'. To load the vocabulary from a Google pretrained"
" model use `tokenizer = BertTokenizer.from_pretrained(PRETRAINED_MODEL_NAME)`"
)
self.vocab = load_vocab(vocab_file)
self.ids_to_tokens = collections.OrderedDict([(ids, tok) for tok, ids in self.vocab.items()])
self.do_basic_tokenize = do_basic_tokenize
if do_basic_tokenize:
self.basic_tokenizer = BasicTokenizer(
do_lower_case=do_lower_case,
never_split=never_split,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
)
self.wordpiece_tokenizer = WordpieceTokenizer(vocab=self.vocab, unk_token=self.unk_token)
# Additional properties
self.cell_trim_length = cell_trim_length
self.max_column_id = max_column_id if max_column_id is not None else self.model_max_length
self.max_row_id = max_row_id if max_row_id is not None else self.model_max_length
self.strip_column_names = strip_column_names
self.update_answer_coordinates = update_answer_coordinates
self.min_question_length = min_question_length
self.max_question_length = max_question_length
@property
def do_lower_case(self):
return self.basic_tokenizer.do_lower_case
@property
def vocab_size(self):
return len(self.vocab)
def get_vocab(self):
return dict(self.vocab, **self.added_tokens_encoder)
def _tokenize(self, text):
if format_text(text) == EMPTY_TEXT:
return [self.additional_special_tokens[0]]
split_tokens = []
if self.do_basic_tokenize:
for token in self.basic_tokenizer.tokenize(text, never_split=self.all_special_tokens):
# If the token is part of the never_split set
if token in self.basic_tokenizer.never_split:
split_tokens.append(token)
else:
split_tokens += self.wordpiece_tokenizer.tokenize(token)
else:
split_tokens = self.wordpiece_tokenizer.tokenize(text)
return split_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.vocab.get(token, self.vocab.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.ids_to_tokens.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = " ".join(tokens).replace(" ##", "").strip()
return out_string
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
index = 0
if os.path.isdir(save_directory):
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
else:
vocab_file = (filename_prefix + "-" if filename_prefix else "") + save_directory
with open(vocab_file, "w", encoding="utf-8") as writer:
for token, token_index in sorted(self.vocab.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {vocab_file}: vocabulary indices are not consecutive."
" Please check that the vocabulary is not corrupted!"
)
index = token_index
writer.write(token + "\n")
index += 1
return (vocab_file,)
def create_attention_mask_from_sequences(self, query_ids: List[int], table_values: List[TableValue]) -> List[int]:
"""
Creates the attention mask according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the attention mask values.
"""
return [1] * (1 + len(query_ids) + 1 + len(table_values))
def create_segment_token_type_ids_from_sequences(
self, query_ids: List[int], table_values: List[TableValue]
) -> List[int]:
"""
Creates the segment token type IDs according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the segment token type IDs values.
"""
table_ids = list(zip(*table_values))[0] if table_values else []
return [0] * (1 + len(query_ids) + 1) + [1] * len(table_ids)
def create_column_token_type_ids_from_sequences(
self, query_ids: List[int], table_values: List[TableValue]
) -> List[int]:
"""
Creates the column token type IDs according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the column token type IDs values.
"""
table_column_ids = list(zip(*table_values))[1] if table_values else []
return [0] * (1 + len(query_ids) + 1) + list(table_column_ids)
def create_row_token_type_ids_from_sequences(
self, query_ids: List[int], table_values: List[TableValue]
) -> List[int]:
"""
Creates the row token type IDs according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the row token type IDs values.
"""
table_row_ids = list(zip(*table_values))[2] if table_values else []
return [0] * (1 + len(query_ids) + 1) + list(table_row_ids)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a question and flattened table for question answering or sequence classification tasks
by concatenating and adding special tokens.
Args:
token_ids_0 (`List[int]`): The ids of the question.
token_ids_1 (`List[int]`, *optional*): The ids of the flattened table.
Returns:
`List[int]`: The model input with special tokens.
"""
if token_ids_1 is None:
raise ValueError("With TAPAS, you must provide both question IDs and table IDs.")
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id] + token_ids_1
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of question IDs.
token_ids_1 (`List[int]`, *optional*):
List of flattened table IDs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is not None:
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1))
return [1] + ([0] * len(token_ids_0)) + [1]
@add_end_docstrings(TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def __call__(
self,
table: "pd.DataFrame",
queries: Optional[
Union[
TextInput,
PreTokenizedInput,
EncodedInput,
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
]
] = None,
answer_coordinates: Optional[Union[List[Tuple], List[List[Tuple]]]] = None,
answer_text: Optional[Union[List[TextInput], List[List[TextInput]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) related to a table.
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
queries (`str` or `List[str]`):
Question or batch of questions related to a table to be encoded. Note that in case of a batch, all
questions must refer to the **same** table.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. In case only a single table-question pair
is provided, then the answer_coordinates must be a single list of one or more tuples. Each tuple must
be a (row_index, column_index) pair. The first data row (not the column header row) has index 0. The
first column has index 0. In case a batch of table-question pairs is provided, then the
answer_coordinates must be a list of lists of tuples (each list corresponding to a single
table-question pair).
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. In case only a single table-question pair is
provided, then the answer_text must be a single list of one or more strings. Each string must be the
answer text of a corresponding answer coordinate. In case a batch of table-question pairs is provided,
then the answer_coordinates must be a list of lists of strings (each list corresponding to a single
table-question pair).
"""
assert isinstance(table, pd.DataFrame), "Table must be of type pd.DataFrame"
# Input type checking for clearer error
valid_query = False
# Check that query has a valid type
if queries is None or isinstance(queries, str):
valid_query = True
elif isinstance(queries, (list, tuple)):
if len(queries) == 0 or isinstance(queries[0], str):
valid_query = True
if not valid_query:
raise ValueError(
"queries input must of type `str` (single example), `List[str]` (batch or single pretokenized"
" example). "
)
is_batched = isinstance(queries, (list, tuple))
if is_batched:
return self.batch_encode_plus(
table=table,
queries=queries,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
table=table,
query=queries,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def batch_encode_plus(
self,
table: "pd.DataFrame",
queries: Optional[
Union[
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
]
] = None,
answer_coordinates: Optional[List[List[Tuple]]] = None,
answer_text: Optional[List[List[TextInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Prepare a table and a list of strings for the model.
<Tip warning={true}>
This method is deprecated, `__call__` should be used instead.
</Tip>
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
queries (`List[str]`):
Batch of questions related to a table to be encoded. Note that all questions must refer to the **same**
table.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. Each tuple must be a (row_index,
column_index) pair. The first data row (not the column header row) has index 0. The first column has
index 0. The answer_coordinates must be a list of lists of tuples (each list corresponding to a single
table-question pair).
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. In case a batch of table-question pairs is
provided, then the answer_coordinates must be a list of lists of strings (each list corresponding to a
single table-question pair). Each string must be the answer text of a corresponding answer coordinate.
"""
if return_token_type_ids is not None and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
if (answer_coordinates and not answer_text) or (not answer_coordinates and answer_text):
raise ValueError("In case you provide answers, both answer_coordinates and answer_text should be provided")
elif answer_coordinates is None and answer_text is None:
answer_coordinates = answer_text = [None] * len(queries)
if "is_split_into_words" in kwargs:
raise NotImplementedError("Currently TapasTokenizer only supports questions as strings.")
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
return self._batch_encode_plus(
table=table,
queries=queries,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _get_question_tokens(self, query):
"""Tokenizes the query, taking into account the max and min question length."""
query_tokens = self.tokenize(query)
if self.max_question_length is not None and len(query_tokens) > self.max_question_length:
logger.warning("Skipping query as its tokens are longer than the max question length")
return "", []
if self.min_question_length is not None and len(query_tokens) < self.min_question_length:
logger.warning("Skipping query as its tokens are shorter than the min question length")
return "", []
return query, query_tokens
def _batch_encode_plus(
self,
table,
queries: Union[
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
],
answer_coordinates: Optional[List[List[Tuple]]] = None,
answer_text: Optional[List[List[TextInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
table_tokens = self._tokenize_table(table)
queries_tokens = []
for idx, query in enumerate(queries):
query, query_tokens = self._get_question_tokens(query)
queries[idx] = query
queries_tokens.append(query_tokens)
batch_outputs = self._batch_prepare_for_model(
table,
queries,
tokenized_table=table_tokens,
queries_tokens=queries_tokens,
answer_coordinates=answer_coordinates,
padding=padding,
truncation=truncation,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
return BatchEncoding(batch_outputs)
def _batch_prepare_for_model(
self,
raw_table: "pd.DataFrame",
raw_queries: Union[
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
],
tokenized_table: Optional[TokenizedTable] = None,
queries_tokens: Optional[List[List[str]]] = None,
answer_coordinates: Optional[List[List[Tuple]]] = None,
answer_text: Optional[List[List[TextInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = True,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs,
) -> BatchEncoding:
batch_outputs = {}
for index, example in enumerate(zip(raw_queries, queries_tokens, answer_coordinates, answer_text)):
raw_query, query_tokens, answer_coords, answer_txt = example
outputs = self.prepare_for_model(
raw_table,
raw_query,
tokenized_table=tokenized_table,
query_tokens=query_tokens,
answer_coordinates=answer_coords,
answer_text=answer_txt,
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterwards
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=None, # we pad in batch afterwards
return_attention_mask=False, # we pad in batch afterwards
return_token_type_ids=return_token_type_ids,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
prev_answer_coordinates=answer_coordinates[index - 1] if index != 0 else None,
prev_answer_text=answer_text[index - 1] if index != 0 else None,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return batch_outputs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING)
def encode(
self,
table: "pd.DataFrame",
query: Optional[
Union[
TextInput,
PreTokenizedInput,
EncodedInput,
]
] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs,
) -> List[int]:
"""
Prepare a table and a string for the model. This method does not return token type IDs, attention masks, etc.
which are necessary for the model to work correctly. Use that method if you want to build your processing on
your own, otherwise refer to `__call__`.
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
query (`str` or `List[str]`):
Question related to a table to be encoded.
"""
encoded_inputs = self.encode_plus(
table,
query=query,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
return_tensors=return_tensors,
**kwargs,
)
return encoded_inputs["input_ids"]
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def encode_plus(
self,
table: "pd.DataFrame",
query: Optional[
Union[
TextInput,
PreTokenizedInput,
EncodedInput,
]
] = None,
answer_coordinates: Optional[List[Tuple]] = None,
answer_text: Optional[List[TextInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Prepare a table and a string for the model.
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
query (`str` or `List[str]`):
Question related to a table to be encoded.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. The answer_coordinates must be a single
list of one or more tuples. Each tuple must be a (row_index, column_index) pair. The first data row
(not the column header row) has index 0. The first column has index 0.
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. The answer_text must be a single list of one or
more strings. Each string must be the answer text of a corresponding answer coordinate.
"""
if return_token_type_ids is not None and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
if (answer_coordinates and not answer_text) or (not answer_coordinates and answer_text):
raise ValueError("In case you provide answers, both answer_coordinates and answer_text should be provided")
if "is_split_into_words" in kwargs:
raise NotImplementedError("Currently TapasTokenizer only supports questions as strings.")
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
return self._encode_plus(
table=table,
query=query,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
truncation=truncation,
padding=padding,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _encode_plus(
self,
table: "pd.DataFrame",
query: Union[
TextInput,
PreTokenizedInput,
EncodedInput,
],
answer_coordinates: Optional[List[Tuple]] = None,
answer_text: Optional[List[TextInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = True,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
):
if query is None:
query = ""
logger.warning(
"TAPAS is a question answering model but you have not passed a query. Please be aware that the "
"model will probably not behave correctly."
)
table_tokens = self._tokenize_table(table)
query, query_tokens = self._get_question_tokens(query)
return self.prepare_for_model(
table,
query,
tokenized_table=table_tokens,
query_tokens=query_tokens,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
truncation=truncation,
padding=padding,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def prepare_for_model(
self,
raw_table: "pd.DataFrame",
raw_query: Union[
TextInput,
PreTokenizedInput,
EncodedInput,
],
tokenized_table: Optional[TokenizedTable] = None,
query_tokens: Optional[TokenizedTable] = None,
answer_coordinates: Optional[List[Tuple]] = None,
answer_text: Optional[List[TextInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = True,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs,
) -> BatchEncoding:
"""
Prepares a sequence of input id so that it can be used by the model. It adds special tokens, truncates
sequences if overflowing while taking into account the special tokens.
Args:
raw_table (`pd.DataFrame`):
The original table before any transformation (like tokenization) was applied to it.
raw_query (`TextInput` or `PreTokenizedInput` or `EncodedInput`):
The original query before any transformation (like tokenization) was applied to it.
tokenized_table (`TokenizedTable`):
The table after tokenization.
query_tokens (`List[str]`):
The query after tokenization.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. The answer_coordinates must be a single
list of one or more tuples. Each tuple must be a (row_index, column_index) pair. The first data row
(not the column header row) has index 0. The first column has index 0.
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. The answer_text must be a single list of one or
more strings. Each string must be the answer text of a corresponding answer coordinate.
"""
if isinstance(padding, bool):
if padding and (max_length is not None or pad_to_multiple_of is not None):
padding = PaddingStrategy.MAX_LENGTH
else:
padding = PaddingStrategy.DO_NOT_PAD
elif not isinstance(padding, PaddingStrategy):
padding = PaddingStrategy(padding)
if isinstance(truncation, bool):
if truncation:
truncation = TapasTruncationStrategy.DROP_ROWS_TO_FIT
else:
truncation = TapasTruncationStrategy.DO_NOT_TRUNCATE
elif not isinstance(truncation, TapasTruncationStrategy):
truncation = TapasTruncationStrategy(truncation)
encoded_inputs = {}
is_part_of_batch = False
prev_answer_coordinates, prev_answer_text = None, None
if "prev_answer_coordinates" in kwargs and "prev_answer_text" in kwargs:
is_part_of_batch = True
prev_answer_coordinates = kwargs["prev_answer_coordinates"]
prev_answer_text = kwargs["prev_answer_text"]
num_rows = self._get_num_rows(raw_table, truncation != TapasTruncationStrategy.DO_NOT_TRUNCATE)
num_columns = self._get_num_columns(raw_table)
_, _, num_tokens = self._get_table_boundaries(tokenized_table)
if truncation != TapasTruncationStrategy.DO_NOT_TRUNCATE:
num_rows, num_tokens = self._get_truncated_table_rows(
query_tokens, tokenized_table, num_rows, num_columns, max_length, truncation_strategy=truncation
)
table_data = list(self._get_table_values(tokenized_table, num_columns, num_rows, num_tokens))
query_ids = self.convert_tokens_to_ids(query_tokens)
table_ids = list(zip(*table_data))[0] if len(table_data) > 0 else list(zip(*table_data))
table_ids = self.convert_tokens_to_ids(list(table_ids))
if "return_overflowing_tokens" in kwargs and kwargs["return_overflowing_tokens"]:
raise ValueError("TAPAS does not return overflowing tokens as it works on tables.")
if add_special_tokens:
input_ids = self.build_inputs_with_special_tokens(query_ids, table_ids)
else:
input_ids = query_ids + table_ids
if max_length is not None and len(input_ids) > max_length:
raise ValueError(
"Could not encode the query and table header given the maximum length. Encoding the query and table "
f"header results in a length of {len(input_ids)} which is higher than the max_length of {max_length}"
)
encoded_inputs["input_ids"] = input_ids
segment_ids = self.create_segment_token_type_ids_from_sequences(query_ids, table_data)
column_ids = self.create_column_token_type_ids_from_sequences(query_ids, table_data)
row_ids = self.create_row_token_type_ids_from_sequences(query_ids, table_data)
if not is_part_of_batch or (prev_answer_coordinates is None and prev_answer_text is None):
# simply set the prev_labels to zeros
prev_labels = [0] * len(row_ids)
else:
prev_labels = self.get_answer_ids(
column_ids, row_ids, table_data, prev_answer_text, prev_answer_coordinates
)
# FIRST: parse both the table and question in terms of numeric values
raw_table = add_numeric_table_values(raw_table)
raw_query = add_numeric_values_to_question(raw_query)
# SECOND: add numeric-related features (and not parse them in these functions):
column_ranks, inv_column_ranks = self._get_numeric_column_ranks(column_ids, row_ids, raw_table)
numeric_relations = self._get_numeric_relations(raw_query, column_ids, row_ids, raw_table)
# Load from model defaults
if return_token_type_ids is None:
return_token_type_ids = "token_type_ids" in self.model_input_names
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
if return_attention_mask:
attention_mask = self.create_attention_mask_from_sequences(query_ids, table_data)
encoded_inputs["attention_mask"] = attention_mask
if answer_coordinates is not None and answer_text is not None:
labels = self.get_answer_ids(column_ids, row_ids, table_data, answer_text, answer_coordinates)
numeric_values = self._get_numeric_values(raw_table, column_ids, row_ids)
numeric_values_scale = self._get_numeric_values_scale(raw_table, column_ids, row_ids)
encoded_inputs["labels"] = labels
encoded_inputs["numeric_values"] = numeric_values
encoded_inputs["numeric_values_scale"] = numeric_values_scale
if return_token_type_ids:
token_type_ids = [
segment_ids,
column_ids,
row_ids,
prev_labels,
column_ranks,
inv_column_ranks,
numeric_relations,
]
token_type_ids = [list(ids) for ids in list(zip(*token_type_ids))]
encoded_inputs["token_type_ids"] = token_type_ids
if return_special_tokens_mask:
if add_special_tokens:
encoded_inputs["special_tokens_mask"] = self.get_special_tokens_mask(query_ids, table_ids)
else:
encoded_inputs["special_tokens_mask"] = [0] * len(input_ids)
# Check lengths
if max_length is None and len(encoded_inputs["input_ids"]) > self.model_max_length and verbose:
if not self.deprecation_warnings.get("sequence-length-is-longer-than-the-specified-maximum", False):
logger.warning(
"Token indices sequence length is longer than the specified maximum sequence length "
f"for this model ({len(encoded_inputs['input_ids'])} > {self.model_max_length}). Running this "
"sequence through the model will result in indexing errors."
)
self.deprecation_warnings["sequence-length-is-longer-than-the-specified-maximum"] = True
# Padding
if padding != PaddingStrategy.DO_NOT_PAD or return_attention_mask:
encoded_inputs = self.pad(
encoded_inputs,
max_length=max_length,
padding=padding.value,
pad_to_multiple_of=pad_to_multiple_of,
return_attention_mask=return_attention_mask,
)
if return_length:
encoded_inputs["length"] = len(encoded_inputs["input_ids"])
batch_outputs = BatchEncoding(
encoded_inputs, tensor_type=return_tensors, prepend_batch_axis=prepend_batch_axis
)
return batch_outputs
def _get_truncated_table_rows(
self,
query_tokens: List[str],
tokenized_table: TokenizedTable,
num_rows: int,
num_columns: int,
max_length: int,
truncation_strategy: Union[str, TapasTruncationStrategy],
) -> Tuple[int, int]:
"""
Truncates a sequence pair in-place following the strategy.
Args:
query_tokens (`List[str]`):
List of strings corresponding to the tokenized query.
tokenized_table (`TokenizedTable`):
Tokenized table
num_rows (`int`):
Total number of table rows
num_columns (`int`):
Total number of table columns
max_length (`int`):
Total maximum length.
truncation_strategy (`str` or [`TapasTruncationStrategy`]):
Truncation strategy to use. Seeing as this method should only be called when truncating, the only
available strategy is the `"drop_rows_to_fit"` strategy.
Returns:
`Tuple(int, int)`: tuple containing the number of rows after truncation, and the number of tokens available
for each table element.
"""
if not isinstance(truncation_strategy, TapasTruncationStrategy):
truncation_strategy = TapasTruncationStrategy(truncation_strategy)
if max_length is None:
max_length = self.model_max_length
if truncation_strategy == TapasTruncationStrategy.DROP_ROWS_TO_FIT:
while True:
num_tokens = self._get_max_num_tokens(
query_tokens, tokenized_table, num_rows=num_rows, num_columns=num_columns, max_length=max_length
)
if num_tokens is not None:
# We could fit the table.
break
# Try to drop a row to fit the table.
num_rows -= 1
if num_rows < 1:
break
elif truncation_strategy != TapasTruncationStrategy.DO_NOT_TRUNCATE:
raise ValueError(f"Unknown truncation strategy {truncation_strategy}.")
return num_rows, num_tokens or 1
def _tokenize_table(
self,
table=None,
):
"""
Tokenizes column headers and cell texts of a table.
Args:
table (`pd.Dataframe`):
Table. Returns: `TokenizedTable`: TokenizedTable object.
"""
tokenized_rows = []
tokenized_row = []
# tokenize column headers
for column in table:
if self.strip_column_names:
tokenized_row.append(self.tokenize(""))
else:
tokenized_row.append(self.tokenize(column))
tokenized_rows.append(tokenized_row)
# tokenize cell values
for idx, row in table.iterrows():
tokenized_row = []
for cell in row:
tokenized_row.append(self.tokenize(cell))
tokenized_rows.append(tokenized_row)
token_coordinates = []
for row_index, row in enumerate(tokenized_rows):
for column_index, cell in enumerate(row):
for token_index, _ in enumerate(cell):
token_coordinates.append(
TokenCoordinates(
row_index=row_index,
column_index=column_index,
token_index=token_index,
)
)
return TokenizedTable(
rows=tokenized_rows,
selected_tokens=token_coordinates,
)
def _question_encoding_cost(self, question_tokens):
# Two extra spots of SEP and CLS.
return len(question_tokens) + 2
def _get_token_budget(self, question_tokens, max_length=None):
"""
Computes the number of tokens left for the table after tokenizing a question, taking into account the max
sequence length of the model.
Args:
question_tokens (`List[String]`):
List of question tokens. Returns: `int`: the number of tokens left for the table, given the model max
length.
"""
return (max_length if max_length is not None else self.model_max_length) - self._question_encoding_cost(
question_tokens
)
def _get_table_values(self, table, num_columns, num_rows, num_tokens) -> Generator[TableValue, None, None]:
"""Iterates over partial table and returns token, column and row indexes."""
for tc in table.selected_tokens:
# First row is header row.
if tc.row_index >= num_rows + 1:
continue
if tc.column_index >= num_columns:
continue
cell = table.rows[tc.row_index][tc.column_index]
token = cell[tc.token_index]
word_begin_index = tc.token_index
# Don't add partial words. Find the starting word piece and check if it
# fits in the token budget.
while word_begin_index >= 0 and _is_inner_wordpiece(cell[word_begin_index]):
word_begin_index -= 1
if word_begin_index >= num_tokens:
continue
yield TableValue(token, tc.column_index + 1, tc.row_index)
def _get_table_boundaries(self, table):
"""Return maximal number of rows, columns and tokens."""
max_num_tokens = 0
max_num_columns = 0
max_num_rows = 0
for tc in table.selected_tokens:
max_num_columns = max(max_num_columns, tc.column_index + 1)
max_num_rows = max(max_num_rows, tc.row_index + 1)
max_num_tokens = max(max_num_tokens, tc.token_index + 1)
max_num_columns = min(self.max_column_id, max_num_columns)
max_num_rows = min(self.max_row_id, max_num_rows)
return max_num_rows, max_num_columns, max_num_tokens
def _get_table_cost(self, table, num_columns, num_rows, num_tokens):
return sum(1 for _ in self._get_table_values(table, num_columns, num_rows, num_tokens))
def _get_max_num_tokens(self, question_tokens, tokenized_table, num_columns, num_rows, max_length):
"""Computes max number of tokens that can be squeezed into the budget."""
token_budget = self._get_token_budget(question_tokens, max_length)
_, _, max_num_tokens = self._get_table_boundaries(tokenized_table)
if self.cell_trim_length >= 0 and max_num_tokens > self.cell_trim_length:
max_num_tokens = self.cell_trim_length
num_tokens = 0
for num_tokens in range(max_num_tokens + 1):
cost = self._get_table_cost(tokenized_table, num_columns, num_rows, num_tokens + 1)
if cost > token_budget:
break
if num_tokens < max_num_tokens:
if self.cell_trim_length >= 0:
# We don't allow dynamic trimming if a cell_trim_length is set.
return None
if num_tokens == 0:
return None
return num_tokens
def _get_num_columns(self, table):
num_columns = table.shape[1]
if num_columns >= self.max_column_id:
raise ValueError("Too many columns")
return num_columns
def _get_num_rows(self, table, drop_rows_to_fit):
num_rows = table.shape[0]
if num_rows >= self.max_row_id:
if drop_rows_to_fit:
num_rows = self.max_row_id - 1
else:
raise ValueError("Too many rows")
return num_rows
def _serialize_text(self, question_tokens):
"""Serializes texts in index arrays."""
tokens = []
segment_ids = []
column_ids = []
row_ids = []
# add [CLS] token at the beginning
tokens.append(self.cls_token)
segment_ids.append(0)
column_ids.append(0)
row_ids.append(0)
for token in question_tokens:
tokens.append(token)
segment_ids.append(0)
column_ids.append(0)
row_ids.append(0)
return tokens, segment_ids, column_ids, row_ids
def _serialize(
self,
question_tokens,
table,
num_columns,
num_rows,
num_tokens,
):
"""Serializes table and text."""
tokens, segment_ids, column_ids, row_ids = self._serialize_text(question_tokens)
# add [SEP] token between question and table tokens
tokens.append(self.sep_token)
segment_ids.append(0)
column_ids.append(0)
row_ids.append(0)
for token, column_id, row_id in self._get_table_values(table, num_columns, num_rows, num_tokens):
tokens.append(token)
segment_ids.append(1)
column_ids.append(column_id)
row_ids.append(row_id)
return SerializedExample(
tokens=tokens,
segment_ids=segment_ids,
column_ids=column_ids,
row_ids=row_ids,
)
def _get_column_values(self, table, col_index):
table_numeric_values = {}
for row_index, row in table.iterrows():
cell = row[col_index]
if cell.numeric_value is not None:
table_numeric_values[row_index] = cell.numeric_value
return table_numeric_values
def _get_cell_token_indexes(self, column_ids, row_ids, column_id, row_id):
for index in range(len(column_ids)):
if column_ids[index] - 1 == column_id and row_ids[index] - 1 == row_id:
yield index
def _get_numeric_column_ranks(self, column_ids, row_ids, table):
"""Returns column ranks for all numeric columns."""
ranks = [0] * len(column_ids)
inv_ranks = [0] * len(column_ids)
# original code from tf_example_utils.py of the original implementation
if table is not None:
for col_index in range(len(table.columns)):
table_numeric_values = self._get_column_values(table, col_index)
if not table_numeric_values:
continue
try:
key_fn = get_numeric_sort_key_fn(table_numeric_values.values())
except ValueError:
continue
table_numeric_values = {row_index: key_fn(value) for row_index, value in table_numeric_values.items()}
table_numeric_values_inv = collections.defaultdict(list)
for row_index, value in table_numeric_values.items():
table_numeric_values_inv[value].append(row_index)
unique_values = sorted(table_numeric_values_inv.keys())
for rank, value in enumerate(unique_values):
for row_index in table_numeric_values_inv[value]:
for index in self._get_cell_token_indexes(column_ids, row_ids, col_index, row_index):
ranks[index] = rank + 1
inv_ranks[index] = len(unique_values) - rank
return ranks, inv_ranks
def _get_numeric_sort_key_fn(self, table_numeric_values, value):
"""
Returns the sort key function for comparing value to table values. The function returned will be a suitable
input for the key param of the sort(). See number_annotation_utils._get_numeric_sort_key_fn for details
Args:
table_numeric_values: Numeric values of a column
value: Numeric value in the question
Returns:
A function key function to compare column and question values.
"""
if not table_numeric_values:
return None
all_values = list(table_numeric_values.values())
all_values.append(value)
try:
return get_numeric_sort_key_fn(all_values)
except ValueError:
return None
def _get_numeric_relations(self, question, column_ids, row_ids, table):
"""
Returns numeric relations embeddings
Args:
question: Question object.
column_ids: Maps word piece position to column id.
row_ids: Maps word piece position to row id.
table: The table containing the numeric cell values.
"""
numeric_relations = [0] * len(column_ids)
# first, we add any numeric value spans to the question:
# Create a dictionary that maps a table cell to the set of all relations
# this cell has with any value in the question.
cell_indices_to_relations = collections.defaultdict(set)
if question is not None and table is not None:
for numeric_value_span in question.numeric_spans:
for value in numeric_value_span.values:
for column_index in range(len(table.columns)):
table_numeric_values = self._get_column_values(table, column_index)
sort_key_fn = self._get_numeric_sort_key_fn(table_numeric_values, value)
if sort_key_fn is None:
continue
for row_index, cell_value in table_numeric_values.items():
relation = get_numeric_relation(value, cell_value, sort_key_fn)
if relation is not None:
cell_indices_to_relations[column_index, row_index].add(relation)
# For each cell add a special feature for all its word pieces.
for (column_index, row_index), relations in cell_indices_to_relations.items():
relation_set_index = 0
for relation in relations:
assert relation.value >= Relation.EQ.value
relation_set_index += 2 ** (relation.value - Relation.EQ.value)
for cell_token_index in self._get_cell_token_indexes(column_ids, row_ids, column_index, row_index):
numeric_relations[cell_token_index] = relation_set_index
return numeric_relations
def _get_numeric_values(self, table, column_ids, row_ids):
"""Returns numeric values for computation of answer loss."""
numeric_values = [float("nan")] * len(column_ids)
if table is not None:
num_rows = table.shape[0]
num_columns = table.shape[1]
for col_index in range(num_columns):
for row_index in range(num_rows):
numeric_value = table.iloc[row_index, col_index].numeric_value
if numeric_value is not None:
if numeric_value.float_value is None:
continue
float_value = numeric_value.float_value
if float_value == float("inf"):
continue
for index in self._get_cell_token_indexes(column_ids, row_ids, col_index, row_index):
numeric_values[index] = float_value
return numeric_values
def _get_numeric_values_scale(self, table, column_ids, row_ids):
"""Returns a scale to each token to down weigh the value of long words."""
numeric_values_scale = [1.0] * len(column_ids)
if table is None:
return numeric_values_scale
num_rows = table.shape[0]
num_columns = table.shape[1]
for col_index in range(num_columns):
for row_index in range(num_rows):
indices = list(self._get_cell_token_indexes(column_ids, row_ids, col_index, row_index))
num_indices = len(indices)
if num_indices > 1:
for index in indices:
numeric_values_scale[index] = float(num_indices)
return numeric_values_scale
def _pad_to_seq_length(self, inputs):
while len(inputs) > self.model_max_length:
inputs.pop()
while len(inputs) < self.model_max_length:
inputs.append(0)
def _get_all_answer_ids_from_coordinates(
self,
column_ids,
row_ids,
answers_list,
):
"""Maps lists of answer coordinates to token indexes."""
answer_ids = [0] * len(column_ids)
found_answers = set()
all_answers = set()
for answers in answers_list:
column_index, row_index = answers
all_answers.add((column_index, row_index))
for index in self._get_cell_token_indexes(column_ids, row_ids, column_index, row_index):
found_answers.add((column_index, row_index))
answer_ids[index] = 1
missing_count = len(all_answers) - len(found_answers)
return answer_ids, missing_count
def _get_all_answer_ids(self, column_ids, row_ids, answer_coordinates):
"""
Maps answer coordinates of a question to token indexes.
In the SQA format (TSV), the coordinates are given as (row, column) tuples. Here, we first swap them to
(column, row) format before calling _get_all_answer_ids_from_coordinates.
"""
def _to_coordinates(answer_coordinates_question):
return [(coords[1], coords[0]) for coords in answer_coordinates_question]
return self._get_all_answer_ids_from_coordinates(
column_ids, row_ids, answers_list=(_to_coordinates(answer_coordinates))
)
def _find_tokens(self, text, segment):
"""Return start index of segment in text or None."""
logging.info(f"text: {text} {segment}")
for index in range(1 + len(text) - len(segment)):
for seg_index, seg_token in enumerate(segment):
if text[index + seg_index].piece != seg_token.piece:
break
else:
return index
return None
def _find_answer_coordinates_from_answer_text(
self,
tokenized_table,
answer_text,
):
"""Returns all occurrences of answer_text in the table."""
logging.info(f"answer text: {answer_text}")
for row_index, row in enumerate(tokenized_table.rows):
if row_index == 0:
# We don't search for answers in the header.
continue
for col_index, cell in enumerate(row):
token_index = self._find_tokens(cell, answer_text)
if token_index is not None:
yield TokenCoordinates(
row_index=row_index,
column_index=col_index,
token_index=token_index,
)
def _find_answer_ids_from_answer_texts(
self,
column_ids,
row_ids,
tokenized_table,
answer_texts,
):
"""Maps question with answer texts to the first matching token indexes."""
answer_ids = [0] * len(column_ids)
for answer_text in answer_texts:
for coordinates in self._find_answer_coordinates_from_answer_text(
tokenized_table,
answer_text,
):
# Maps answer coordinates to indexes this can fail if tokens / rows have
# been pruned.
indexes = list(
self._get_cell_token_indexes(
column_ids,
row_ids,
column_id=coordinates.column_index,
row_id=coordinates.row_index - 1,
)
)
indexes.sort()
coordinate_answer_ids = []
if indexes:
begin_index = coordinates.token_index + indexes[0]
end_index = begin_index + len(answer_text)
for index in indexes:
if index >= begin_index and index < end_index:
coordinate_answer_ids.append(index)
if len(coordinate_answer_ids) == len(answer_text):
for index in coordinate_answer_ids:
answer_ids[index] = 1
break
return answer_ids
def _get_answer_ids(self, column_ids, row_ids, answer_coordinates):
"""Maps answer coordinates of a question to token indexes."""
answer_ids, missing_count = self._get_all_answer_ids(column_ids, row_ids, answer_coordinates)
if missing_count:
raise ValueError("Couldn't find all answers")
return answer_ids
def get_answer_ids(self, column_ids, row_ids, tokenized_table, answer_texts_question, answer_coordinates_question):
if self.update_answer_coordinates:
return self._find_answer_ids_from_answer_texts(
column_ids,
row_ids,
tokenized_table,
answer_texts=[self.tokenize(at) for at in answer_texts_question],
)
return self._get_answer_ids(column_ids, row_ids, answer_coordinates_question)
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
Args:
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
`>= 7.5` (Volta).
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(encoded_inputs["input_ids"])
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = (
padding_strategy != PaddingStrategy.DO_NOT_PAD and len(encoded_inputs["input_ids"]) != max_length
)
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(encoded_inputs["input_ids"])
if needs_to_be_padded:
difference = max_length - len(encoded_inputs["input_ids"])
if self.padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = (
encoded_inputs["token_type_ids"] + [[self.pad_token_type_id] * 7] * difference
)
if "labels" in encoded_inputs:
encoded_inputs["labels"] = encoded_inputs["labels"] + [0] * difference
if "numeric_values" in encoded_inputs:
encoded_inputs["numeric_values"] = encoded_inputs["numeric_values"] + [float("nan")] * difference
if "numeric_values_scale" in encoded_inputs:
encoded_inputs["numeric_values_scale"] = (
encoded_inputs["numeric_values_scale"] + [1.0] * difference
)
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs["input_ids"] = encoded_inputs["input_ids"] + [self.pad_token_id] * difference
elif self.padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [[self.pad_token_type_id] * 7] * difference + encoded_inputs[
"token_type_ids"
]
if "labels" in encoded_inputs:
encoded_inputs["labels"] = [0] * difference + encoded_inputs["labels"]
if "numeric_values" in encoded_inputs:
encoded_inputs["numeric_values"] = [float("nan")] * difference + encoded_inputs["numeric_values"]
if "numeric_values_scale" in encoded_inputs:
encoded_inputs["numeric_values_scale"] = [1.0] * difference + encoded_inputs[
"numeric_values_scale"
]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs["input_ids"] = [self.pad_token_id] * difference + encoded_inputs["input_ids"]
else:
raise ValueError("Invalid padding strategy:" + str(self.padding_side))
return encoded_inputs
# Everything related to converting logits to predictions
def _get_cell_token_probs(self, probabilities, segment_ids, row_ids, column_ids):
for i, p in enumerate(probabilities):
segment_id = segment_ids[i]
col = column_ids[i] - 1
row = row_ids[i] - 1
if col >= 0 and row >= 0 and segment_id == 1:
yield i, p
def _get_mean_cell_probs(self, probabilities, segment_ids, row_ids, column_ids):
"""Computes average probability per cell, aggregating over tokens."""
coords_to_probs = collections.defaultdict(list)
for i, prob in self._get_cell_token_probs(probabilities, segment_ids, row_ids, column_ids):
col = column_ids[i] - 1
row = row_ids[i] - 1
coords_to_probs[(col, row)].append(prob)
return {coords: np.array(cell_probs).mean() for coords, cell_probs in coords_to_probs.items()}
def convert_logits_to_predictions(self, data, logits, logits_agg=None, cell_classification_threshold=0.5):
"""
Converts logits of [`TapasForQuestionAnswering`] to actual predicted answer coordinates and optional
aggregation indices.
The original implementation, on which this function is based, can be found
[here](https://github.com/google-research/tapas/blob/4908213eb4df7aa988573350278b44c4dbe3f71b/tapas/experiments/prediction_utils.py#L288).
Args:
data (`dict`):
Dictionary mapping features to actual values. Should be created using [`TapasTokenizer`].
logits (`torch.Tensor` or `tf.Tensor` of shape `(batch_size, sequence_length)`):
Tensor containing the logits at the token level.
logits_agg (`torch.Tensor` or `tf.Tensor` of shape `(batch_size, num_aggregation_labels)`, *optional*):
Tensor containing the aggregation logits.
cell_classification_threshold (`float`, *optional*, defaults to 0.5):
Threshold to be used for cell selection. All table cells for which their probability is larger than
this threshold will be selected.
Returns:
`tuple` comprising various elements depending on the inputs:
- predicted_answer_coordinates (`List[List[[tuple]]` of length `batch_size`): Predicted answer coordinates
as a list of lists of tuples. Each element in the list contains the predicted answer coordinates of a
single example in the batch, as a list of tuples. Each tuple is a cell, i.e. (row index, column index).
- predicted_aggregation_indices (`List[int]`of length `batch_size`, *optional*, returned when
`logits_aggregation` is provided): Predicted aggregation operator indices of the aggregation head.
"""
# converting to numpy arrays to work with PT/TF
logits = logits.numpy()
if logits_agg is not None:
logits_agg = logits_agg.numpy()
data = {key: value.numpy() for key, value in data.items() if key != "training"}
# input data is of type float32
# np.log(np.finfo(np.float32).max) = 88.72284
# Any value over 88.72284 will overflow when passed through the exponential, sending a warning
# We disable this warning by truncating the logits.
logits[logits < -88.7] = -88.7
# Compute probabilities from token logits
probabilities = 1 / (1 + np.exp(-logits)) * data["attention_mask"]
token_types = [
"segment_ids",
"column_ids",
"row_ids",
"prev_labels",
"column_ranks",
"inv_column_ranks",
"numeric_relations",
]
# collect input_ids, segment ids, row ids and column ids of batch. Shape (batch_size, seq_len)
input_ids = data["input_ids"]
segment_ids = data["token_type_ids"][:, :, token_types.index("segment_ids")]
row_ids = data["token_type_ids"][:, :, token_types.index("row_ids")]
column_ids = data["token_type_ids"][:, :, token_types.index("column_ids")]
# next, get answer coordinates for every example in the batch
num_batch = input_ids.shape[0]
predicted_answer_coordinates = []
for i in range(num_batch):
probabilities_example = probabilities[i].tolist()
segment_ids_example = segment_ids[i]
row_ids_example = row_ids[i]
column_ids_example = column_ids[i]
max_width = column_ids_example.max()
max_height = row_ids_example.max()
if max_width == 0 and max_height == 0:
continue
cell_coords_to_prob = self._get_mean_cell_probs(
probabilities_example,
segment_ids_example.tolist(),
row_ids_example.tolist(),
column_ids_example.tolist(),
)
# Select the answers above the classification threshold.
answer_coordinates = []
for col in range(max_width):
for row in range(max_height):
cell_prob = cell_coords_to_prob.get((col, row), None)
if cell_prob is not None:
if cell_prob > cell_classification_threshold:
answer_coordinates.append((row, col))
answer_coordinates = sorted(answer_coordinates)
predicted_answer_coordinates.append(answer_coordinates)
output = (predicted_answer_coordinates,)
if logits_agg is not None:
predicted_aggregation_indices = logits_agg.argmax(axis=-1)
output = (predicted_answer_coordinates, predicted_aggregation_indices.tolist())
return output
# End of everything related to converting logits to predictions
# Copied from transformers.models.bert.tokenization_bert.BasicTokenizer
class BasicTokenizer(object):
"""
Constructs a BasicTokenizer that will run basic tokenization (punctuation splitting, lower casing, etc.).
Args:
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
"""
def __init__(self, do_lower_case=True, never_split=None, tokenize_chinese_chars=True, strip_accents=None):
if never_split is None:
never_split = []
self.do_lower_case = do_lower_case
self.never_split = set(never_split)
self.tokenize_chinese_chars = tokenize_chinese_chars
self.strip_accents = strip_accents
def tokenize(self, text, never_split=None):
"""
Basic Tokenization of a piece of text. Split on "white spaces" only, for sub-word tokenization, see
WordPieceTokenizer.
Args:
never_split (`List[str]`, *optional*)
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of token not to split.
"""
# union() returns a new set by concatenating the two sets.
never_split = self.never_split.union(set(never_split)) if never_split else self.never_split
text = self._clean_text(text)
# This was added on November 1st, 2018 for the multilingual and Chinese
# models. This is also applied to the English models now, but it doesn't
# matter since the English models were not trained on any Chinese data
# and generally don't have any Chinese data in them (there are Chinese
# characters in the vocabulary because Wikipedia does have some Chinese
# words in the English Wikipedia.).
if self.tokenize_chinese_chars:
text = self._tokenize_chinese_chars(text)
orig_tokens = whitespace_tokenize(text)
split_tokens = []
for token in orig_tokens:
if token not in never_split:
if self.do_lower_case:
token = token.lower()
if self.strip_accents is not False:
token = self._run_strip_accents(token)
elif self.strip_accents:
token = self._run_strip_accents(token)
split_tokens.extend(self._run_split_on_punc(token, never_split))
output_tokens = whitespace_tokenize(" ".join(split_tokens))
return output_tokens
def _run_strip_accents(self, text):
"""Strips accents from a piece of text."""
text = unicodedata.normalize("NFD", text)
output = []
for char in text:
cat = unicodedata.category(char)
if cat == "Mn":
continue
output.append(char)
return "".join(output)
def _run_split_on_punc(self, text, never_split=None):
"""Splits punctuation on a piece of text."""
if never_split is not None and text in never_split:
return [text]
chars = list(text)
i = 0
start_new_word = True
output = []
while i < len(chars):
char = chars[i]
if _is_punctuation(char):
output.append([char])
start_new_word = True
else:
if start_new_word:
output.append([])
start_new_word = False
output[-1].append(char)
i += 1
return ["".join(x) for x in output]
def _tokenize_chinese_chars(self, text):
"""Adds whitespace around any CJK character."""
output = []
for char in text:
cp = ord(char)
if self._is_chinese_char(cp):
output.append(" ")
output.append(char)
output.append(" ")
else:
output.append(char)
return "".join(output)
def _is_chinese_char(self, cp):
"""Checks whether CP is the codepoint of a CJK character."""
# This defines a "chinese character" as anything in the CJK Unicode block:
# https://en.wikipedia.org/wiki/CJK_Unified_Ideographs_(Unicode_block)
#
# Note that the CJK Unicode block is NOT all Japanese and Korean characters,
# despite its name. The modern Korean Hangul alphabet is a different block,
# as is Japanese Hiragana and Katakana. Those alphabets are used to write
# space-separated words, so they are not treated specially and handled
# like the all of the other languages.
if (
(cp >= 0x4E00 and cp <= 0x9FFF)
or (cp >= 0x3400 and cp <= 0x4DBF) #
or (cp >= 0x20000 and cp <= 0x2A6DF) #
or (cp >= 0x2A700 and cp <= 0x2B73F) #
or (cp >= 0x2B740 and cp <= 0x2B81F) #
or (cp >= 0x2B820 and cp <= 0x2CEAF) #
or (cp >= 0xF900 and cp <= 0xFAFF)
or (cp >= 0x2F800 and cp <= 0x2FA1F) #
): #
return True
return False
def _clean_text(self, text):
"""Performs invalid character removal and whitespace cleanup on text."""
output = []
for char in text:
cp = ord(char)
if cp == 0 or cp == 0xFFFD or _is_control(char):
continue
if _is_whitespace(char):
output.append(" ")
else:
output.append(char)
return "".join(output)
# Copied from transformers.models.bert.tokenization_bert.WordpieceTokenizer
class WordpieceTokenizer(object):
"""Runs WordPiece tokenization."""
def __init__(self, vocab, unk_token, max_input_chars_per_word=100):
self.vocab = vocab
self.unk_token = unk_token
self.max_input_chars_per_word = max_input_chars_per_word
def tokenize(self, text):
"""
Tokenizes a piece of text into its word pieces. This uses a greedy longest-match-first algorithm to perform
tokenization using the given vocabulary.
For example, `input = "unaffable"` wil return as output `["un", "##aff", "##able"]`.
Args:
text: A single token or whitespace separated tokens. This should have
already been passed through *BasicTokenizer*.
Returns:
A list of wordpiece tokens.
"""
output_tokens = []
for token in whitespace_tokenize(text):
chars = list(token)
if len(chars) > self.max_input_chars_per_word:
output_tokens.append(self.unk_token)
continue
is_bad = False
start = 0
sub_tokens = []
while start < len(chars):
end = len(chars)
cur_substr = None
while start < end:
substr = "".join(chars[start:end])
if start > 0:
substr = "##" + substr
if substr in self.vocab:
cur_substr = substr
break
end -= 1
if cur_substr is None:
is_bad = True
break
sub_tokens.append(cur_substr)
start = end
if is_bad:
output_tokens.append(self.unk_token)
else:
output_tokens.extend(sub_tokens)
return output_tokens
# Below: utilities for TAPAS tokenizer (independent from PyTorch/Tensorflow).
# This includes functions to parse numeric values (dates and numbers) from both the table and questions in order
# to create the column_ranks, inv_column_ranks, numeric_values, numeric values_scale and numeric_relations in
# prepare_for_model of TapasTokenizer.
# These are meant to be used in an academic setup, for production use cases Gold mine or Aqua should be used.
# taken from constants.py of the original implementation
# URL: https://github.com/google-research/tapas/blob/master/tapas/utils/constants.py
class Relation(enum.Enum):
HEADER_TO_CELL = 1 # Connects header to cell.
CELL_TO_HEADER = 2 # Connects cell to header.
QUERY_TO_HEADER = 3 # Connects query to headers.
QUERY_TO_CELL = 4 # Connects query to cells.
ROW_TO_CELL = 5 # Connects row to cells.
CELL_TO_ROW = 6 # Connects cells to row.
EQ = 7 # Annotation value is same as cell value
LT = 8 # Annotation value is less than cell value
GT = 9 # Annotation value is greater than cell value
@dataclass
class Date:
year: Optional[int] = None
month: Optional[int] = None
day: Optional[int] = None
@dataclass
class NumericValue:
float_value: Optional[float] = None
date: Optional[Date] = None
@dataclass
class NumericValueSpan:
begin_index: int = None
end_index: int = None
values: List[NumericValue] = None
@dataclass
class Cell:
text: Text
numeric_value: Optional[NumericValue] = None
@dataclass
class Question:
original_text: Text # The original raw question string.
text: Text # The question string after normalization.
numeric_spans: Optional[List[NumericValueSpan]] = None
# Below: all functions from number_utils.py as well as 2 functions (namely get_all_spans and normalize_for_match)
# from text_utils.py of the original implementation. URL's:
# - https://github.com/google-research/tapas/blob/master/tapas/utils/number_utils.py
# - https://github.com/google-research/tapas/blob/master/tapas/utils/text_utils.py
# Constants for parsing date expressions.
# Masks that specify (by a bool) which of (year, month, day) will be populated.
_DateMask = collections.namedtuple("_DateMask", ["year", "month", "day"])
_YEAR = _DateMask(True, False, False)
_YEAR_MONTH = _DateMask(True, True, False)
_YEAR_MONTH_DAY = _DateMask(True, True, True)
_MONTH = _DateMask(False, True, False)
_MONTH_DAY = _DateMask(False, True, True)
# Pairs of patterns to pass to 'datetime.strptime' and masks specifying which
# fields will be set by the corresponding pattern.
_DATE_PATTERNS = (
("%B", _MONTH),
("%Y", _YEAR),
("%Ys", _YEAR),
("%b %Y", _YEAR_MONTH),
("%B %Y", _YEAR_MONTH),
("%B %d", _MONTH_DAY),
("%b %d", _MONTH_DAY),
("%d %b", _MONTH_DAY),
("%d %B", _MONTH_DAY),
("%B %d, %Y", _YEAR_MONTH_DAY),
("%d %B %Y", _YEAR_MONTH_DAY),
("%m-%d-%Y", _YEAR_MONTH_DAY),
("%Y-%m-%d", _YEAR_MONTH_DAY),
("%Y-%m", _YEAR_MONTH),
("%B %Y", _YEAR_MONTH),
("%d %b %Y", _YEAR_MONTH_DAY),
("%Y-%m-%d", _YEAR_MONTH_DAY),
("%b %d, %Y", _YEAR_MONTH_DAY),
("%d.%m.%Y", _YEAR_MONTH_DAY),
("%A, %b %d", _MONTH_DAY),
("%A, %B %d", _MONTH_DAY),
)
# This mapping is used to convert date patterns to regex patterns.
_FIELD_TO_REGEX = (
("%A", r"\w+"), # Weekday as locale’s full name.
("%B", r"\w+"), # Month as locale’s full name.
("%Y", r"\d{4}"), # Year with century as a decimal number.
("%b", r"\w{3}"), # Month as locale’s abbreviated name.
("%d", r"\d{1,2}"), # Day of the month as a zero-padded decimal number.
("%m", r"\d{1,2}"), # Month as a zero-padded decimal number.
)
def _process_date_pattern(dp):
"""Compute a regex for each date pattern to use as a prefilter."""
pattern, mask = dp
regex = pattern
regex = regex.replace(".", re.escape("."))
regex = regex.replace("-", re.escape("-"))
regex = regex.replace(" ", r"\s+")
for field, field_regex in _FIELD_TO_REGEX:
regex = regex.replace(field, field_regex)
# Make sure we didn't miss any of the fields.
assert "%" not in regex, regex
return pattern, mask, re.compile("^" + regex + "$")
def _process_date_patterns():
return tuple(_process_date_pattern(dp) for dp in _DATE_PATTERNS)
_PROCESSED_DATE_PATTERNS = _process_date_patterns()
_MAX_DATE_NGRAM_SIZE = 5
# Following DynSp:
# https://github.com/Microsoft/DynSP/blob/master/util.py#L414.
_NUMBER_WORDS = [
"zero",
"one",
"two",
"three",
"four",
"five",
"six",
"seven",
"eight",
"nine",
"ten",
"eleven",
"twelve",
]
_ORDINAL_WORDS = [
"zeroth",
"first",
"second",
"third",
"fourth",
"fith",
"sixth",
"seventh",
"eighth",
"ninth",
"tenth",
"eleventh",
"twelfth",
]
_ORDINAL_SUFFIXES = ["st", "nd", "rd", "th"]
_NUMBER_PATTERN = re.compile(r"((^|\s)[+-])?((\.\d+)|(\d+(,\d\d\d)*(\.\d*)?))")
# Following DynSp:
# https://github.com/Microsoft/DynSP/blob/master/util.py#L293.
_MIN_YEAR = 1700
_MAX_YEAR = 2016
_INF = float("INF")
def _get_numeric_value_from_date(date, mask):
"""Converts date (datetime Python object) to a NumericValue object with a Date object value."""
if date.year < _MIN_YEAR or date.year > _MAX_YEAR:
raise ValueError(f"Invalid year: {date.year}")
new_date = Date()
if mask.year:
new_date.year = date.year
if mask.month:
new_date.month = date.month
if mask.day:
new_date.day = date.day
return NumericValue(date=new_date)
def _get_span_length_key(span):
"""Sorts span by decreasing length first and increasing first index second."""
return span[1] - span[0], -span[0]
def _get_numeric_value_from_float(value):
"""Converts float (Python) to a NumericValue object with a float value."""
return NumericValue(float_value=value)
# Doesn't parse ordinal expressions such as '18th of february 1655'.
def _parse_date(text):
"""Attempts to format a text as a standard date string (yyyy-mm-dd)."""
text = re.sub(r"Sept\b", "Sep", text)
for in_pattern, mask, regex in _PROCESSED_DATE_PATTERNS:
if not regex.match(text):
continue
try:
date = datetime.datetime.strptime(text, in_pattern).date()
except ValueError:
continue
try:
return _get_numeric_value_from_date(date, mask)
except ValueError:
continue
return None
def _parse_number(text):
"""Parses simple cardinal and ordinals numbers."""
for suffix in _ORDINAL_SUFFIXES:
if text.endswith(suffix):
text = text[: -len(suffix)]
break
text = text.replace(",", "")
try:
value = float(text)
except ValueError:
return None
if math.isnan(value):
return None
if value == _INF:
return None
return value
def get_all_spans(text, max_ngram_length):
"""
Split a text into all possible ngrams up to 'max_ngram_length'. Split points are white space and punctuation.
Args:
text: Text to split.
max_ngram_length: maximal ngram length.
Yields:
Spans, tuples of begin-end index.
"""
start_indexes = []
for index, char in enumerate(text):
if not char.isalnum():
continue
if index == 0 or not text[index - 1].isalnum():
start_indexes.append(index)
if index + 1 == len(text) or not text[index + 1].isalnum():
for start_index in start_indexes[-max_ngram_length:]:
yield start_index, index + 1
def normalize_for_match(text):
return " ".join(text.lower().split())
def format_text(text):
"""Lowercases and strips punctuation."""
text = text.lower().strip()
if text == "n/a" or text == "?" or text == "nan":
text = EMPTY_TEXT
text = re.sub(r"[^\w\d]+", " ", text).replace("_", " ")
text = " ".join(text.split())
text = text.strip()
if text:
return text
return EMPTY_TEXT
def parse_text(text):
"""
Extracts longest number and date spans.
Args:
text: text to annotate
Returns:
List of longest numeric value spans.
"""
span_dict = collections.defaultdict(list)
for match in _NUMBER_PATTERN.finditer(text):
span_text = text[match.start() : match.end()]
number = _parse_number(span_text)
if number is not None:
span_dict[match.span()].append(_get_numeric_value_from_float(number))
for begin_index, end_index in get_all_spans(text, max_ngram_length=1):
if (begin_index, end_index) in span_dict:
continue
span_text = text[begin_index:end_index]
number = _parse_number(span_text)
if number is not None:
span_dict[begin_index, end_index].append(_get_numeric_value_from_float(number))
for number, word in enumerate(_NUMBER_WORDS):
if span_text == word:
span_dict[begin_index, end_index].append(_get_numeric_value_from_float(float(number)))
break
for number, word in enumerate(_ORDINAL_WORDS):
if span_text == word:
span_dict[begin_index, end_index].append(_get_numeric_value_from_float(float(number)))
break
for begin_index, end_index in get_all_spans(text, max_ngram_length=_MAX_DATE_NGRAM_SIZE):
span_text = text[begin_index:end_index]
date = _parse_date(span_text)
if date is not None:
span_dict[begin_index, end_index].append(date)
spans = sorted(span_dict.items(), key=lambda span_value: _get_span_length_key(span_value[0]), reverse=True)
selected_spans = []
for span, value in spans:
for selected_span, _ in selected_spans:
if selected_span[0] <= span[0] and span[1] <= selected_span[1]:
break
else:
selected_spans.append((span, value))
selected_spans.sort(key=lambda span_value: span_value[0][0])
numeric_value_spans = []
for span, values in selected_spans:
numeric_value_spans.append(NumericValueSpan(begin_index=span[0], end_index=span[1], values=values))
return numeric_value_spans
# Below: all functions from number_annotation_utils.py and 2 functions (namely filter_invalid_unicode
# and filter_invalid_unicode_from_table) from text_utils.py of the original implementation. URL's:
# - https://github.com/google-research/tapas/blob/master/tapas/utils/number_annotation_utils.py
# - https://github.com/google-research/tapas/blob/master/tapas/utils/text_utils.py
_PrimitiveNumericValue = Union[float, Tuple[Optional[float], Optional[float], Optional[float]]]
_SortKeyFn = Callable[[NumericValue], Tuple[float, Ellipsis]]
_DATE_TUPLE_SIZE = 3
EMPTY_TEXT = "EMPTY"
NUMBER_TYPE = "number"
DATE_TYPE = "date"
def _get_value_type(numeric_value):
if numeric_value.float_value is not None:
return NUMBER_TYPE
elif numeric_value.date is not None:
return DATE_TYPE
raise ValueError(f"Unknown type: {numeric_value}")
def _get_value_as_primitive_value(numeric_value):
"""Maps a NumericValue proto to a float or tuple of float."""
if numeric_value.float_value is not None:
return numeric_value.float_value
if numeric_value.date is not None:
date = numeric_value.date
value_tuple = [None, None, None]
# All dates fields are cased to float to produce a simple primitive value.
if date.year is not None:
value_tuple[0] = float(date.year)
if date.month is not None:
value_tuple[1] = float(date.month)
if date.day is not None:
value_tuple[2] = float(date.day)
return tuple(value_tuple)
raise ValueError(f"Unknown type: {numeric_value}")
def _get_all_types(numeric_values):
return {_get_value_type(value) for value in numeric_values}
def get_numeric_sort_key_fn(numeric_values):
"""
Creates a function that can be used as a sort key or to compare the values. Maps to primitive types and finds the
biggest common subset. Consider the values "05/05/2010" and "August 2007". With the corresponding primitive values
(2010.,5.,5.) and (2007.,8., None). These values can be compared by year and date so we map to the sequence (2010.,
5.), (2007., 8.). If we added a third value "2006" with primitive value (2006., None, None), we could only compare
by the year so we would map to (2010.,), (2007.,) and (2006.,).
Args:
numeric_values: Values to compare
Returns:
A function that can be used as a sort key function (mapping numeric values to a comparable tuple)
Raises:
ValueError if values don't have a common type or are not comparable.
"""
value_types = _get_all_types(numeric_values)
if len(value_types) != 1:
raise ValueError(f"No common value type in {numeric_values}")
value_type = next(iter(value_types))
if value_type == NUMBER_TYPE:
# Primitive values are simple floats, nothing to do here.
return _get_value_as_primitive_value
# The type can only be Date at this point which means the primitive type
# is a float triple.
valid_indexes = set(range(_DATE_TUPLE_SIZE))
for numeric_value in numeric_values:
value = _get_value_as_primitive_value(numeric_value)
assert isinstance(value, tuple)
for tuple_index, inner_value in enumerate(value):
if inner_value is None:
valid_indexes.discard(tuple_index)
if not valid_indexes:
raise ValueError(f"No common value in {numeric_values}")
def _sort_key_fn(numeric_value):
value = _get_value_as_primitive_value(numeric_value)
return tuple(value[index] for index in valid_indexes)
return _sort_key_fn
def _consolidate_numeric_values(row_index_to_values, min_consolidation_fraction, debug_info):
"""
Finds the most common numeric values in a column and returns them
Args:
row_index_to_values:
For each row index all the values in that cell.
min_consolidation_fraction:
Fraction of cells that need to have consolidated value.
debug_info:
Additional information only used for logging
Returns:
For each row index the first value that matches the most common value. Rows that don't have a matching value
are dropped. Empty list if values can't be consolidated.
"""
type_counts = collections.Counter()
for numeric_values in row_index_to_values.values():
type_counts.update(_get_all_types(numeric_values))
if not type_counts:
return {}
max_count = max(type_counts.values())
if max_count < len(row_index_to_values) * min_consolidation_fraction:
# logging.log_every_n(logging.INFO, f'Can\'t consolidate types: {debug_info} {row_index_to_values} {max_count}', 100)
return {}
valid_types = set()
for value_type, count in type_counts.items():
if count == max_count:
valid_types.add(value_type)
if len(valid_types) > 1:
assert DATE_TYPE in valid_types
max_type = DATE_TYPE
else:
max_type = next(iter(valid_types))
new_row_index_to_value = {}
for index, values in row_index_to_values.items():
# Extract the first matching value.
for value in values:
if _get_value_type(value) == max_type:
new_row_index_to_value[index] = value
break
return new_row_index_to_value
def _get_numeric_values(text):
"""Parses text and returns numeric values."""
numeric_spans = parse_text(text)
return itertools.chain(*(span.values for span in numeric_spans))
def _get_column_values(table, col_index):
"""
Parses text in column and returns a dict mapping row_index to values. This is the _get_column_values function from
number_annotation_utils.py of the original implementation
Args:
table: Pandas dataframe
col_index: integer, indicating the index of the column to get the numeric values of
"""
index_to_values = {}
for row_index, row in table.iterrows():
text = normalize_for_match(row[col_index].text)
index_to_values[row_index] = list(_get_numeric_values(text))
return index_to_values
def get_numeric_relation(value, other_value, sort_key_fn):
"""Compares two values and returns their relation or None."""
value = sort_key_fn(value)
other_value = sort_key_fn(other_value)
if value == other_value:
return Relation.EQ
if value < other_value:
return Relation.LT
if value > other_value:
return Relation.GT
return None
def add_numeric_values_to_question(question):
"""Adds numeric value spans to a question."""
original_text = question
question = normalize_for_match(question)
numeric_spans = parse_text(question)
return Question(original_text=original_text, text=question, numeric_spans=numeric_spans)
def filter_invalid_unicode(text):
"""Return an empty string and True if 'text' is in invalid unicode."""
return ("", True) if isinstance(text, bytes) else (text, False)
def filter_invalid_unicode_from_table(table):
"""
Removes invalid unicode from table. Checks whether a table cell text contains an invalid unicode encoding. If yes,
reset the table cell text to an empty str and log a warning for each invalid cell
Args:
table: table to clean.
"""
# to do: add table id support
if not hasattr(table, "table_id"):
table.table_id = 0
for row_index, row in table.iterrows():
for col_index, cell in enumerate(row):
cell, is_invalid = filter_invalid_unicode(cell)
if is_invalid:
logging.warning(
f"Scrub an invalid table body @ table_id: {table.table_id}, row_index: {row_index}, "
f"col_index: {col_index}",
)
for col_index, column in enumerate(table.columns):
column, is_invalid = filter_invalid_unicode(column)
if is_invalid:
logging.warning(f"Scrub an invalid table header @ table_id: {table.table_id}, col_index: {col_index}")
def add_numeric_table_values(table, min_consolidation_fraction=0.7, debug_info=None):
"""
Parses text in table column-wise and adds the consolidated values. Consolidation refers to finding values with a
common types (date or number)
Args:
table:
Table to annotate.
min_consolidation_fraction:
Fraction of cells in a column that need to have consolidated value.
debug_info:
Additional information used for logging.
"""
table = table.copy()
# First, filter table on invalid unicode
filter_invalid_unicode_from_table(table)
# Second, replace cell values by Cell objects
for row_index, row in table.iterrows():
for col_index, cell in enumerate(row):
table.iloc[row_index, col_index] = Cell(text=cell)
# Third, add numeric_value attributes to these Cell objects
for col_index, column in enumerate(table.columns):
column_values = _consolidate_numeric_values(
_get_column_values(table, col_index),
min_consolidation_fraction=min_consolidation_fraction,
debug_info=(debug_info, column),
)
for row_index, numeric_value in column_values.items():
table.iloc[row_index, col_index].numeric_value = numeric_value
return table
|
27182812/ChatGLM-LLaMA-chinese-insturct | 111,502 | src/transformers/models/tapas/modeling_tapas.py | # coding=utf-8
# Copyright 2020 Google Research and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch TAPAS model."""
import enum
import math
import os
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutput, BaseModelOutputWithPooling, MaskedLMOutput, SequenceClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import (
apply_chunking_to_forward,
find_pruneable_heads_and_indices,
prune_linear_layer,
torch_int_div,
)
from ...utils import (
ModelOutput,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_tapas import TapasConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "TapasConfig"
_CHECKPOINT_FOR_DOC = "google/tapas-base"
TAPAS_PRETRAINED_MODEL_ARCHIVE_LIST = [
# large models
"google/tapas-large",
"google/tapas-large-finetuned-sqa",
"google/tapas-large-finetuned-wtq",
"google/tapas-large-finetuned-wikisql-supervised",
"google/tapas-large-finetuned-tabfact",
# base models
"google/tapas-base",
"google/tapas-base-finetuned-sqa",
"google/tapas-base-finetuned-wtq",
"google/tapas-base-finetuned-wikisql-supervised",
"google/tapas-base-finetuned-tabfact",
# small models
"google/tapas-small",
"google/tapas-small-finetuned-sqa",
"google/tapas-small-finetuned-wtq",
"google/tapas-small-finetuned-wikisql-supervised",
"google/tapas-small-finetuned-tabfact",
# mini models
"google/tapas-mini",
"google/tapas-mini-finetuned-sqa",
"google/tapas-mini-finetuned-wtq",
"google/tapas-mini-finetuned-wikisql-supervised",
"google/tapas-mini-finetuned-tabfact",
# tiny models
"google/tapas-tiny",
"google/tapas-tiny-finetuned-sqa",
"google/tapas-tiny-finetuned-wtq",
"google/tapas-tiny-finetuned-wikisql-supervised",
"google/tapas-tiny-finetuned-tabfact",
# See all TAPAS models at https://huggingface.co/models?filter=tapas
]
EPSILON_ZERO_DIVISION = 1e-10
CLOSE_ENOUGH_TO_LOG_ZERO = -10000.0
@dataclass
class TableQuestionAnsweringOutput(ModelOutput):
"""
Output type of [`TapasForQuestionAnswering`].
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` (and possibly `answer`, `aggregation_labels`, `numeric_values` and `numeric_values_scale` are provided)):
Total loss as the sum of the hierarchical cell selection log-likelihood loss and (optionally) the
semi-supervised regression loss and (optionally) supervised loss for aggregations.
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Prediction scores of the cell selection head, for every token.
logits_aggregation (`torch.FloatTensor`, *optional*, of shape `(batch_size, num_aggregation_labels)`):
Prediction scores of the aggregation head, for every aggregation operator.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer
plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
loss: Optional[torch.FloatTensor] = None
logits: torch.FloatTensor = None
logits_aggregation: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
def load_tf_weights_in_tapas(model, config, tf_checkpoint_path):
"""
Load tf checkpoints in a PyTorch model. This is an adaptation from load_tf_weights_in_bert
- add cell selection and aggregation heads
- take into account additional token type embedding layers
"""
try:
import re
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_path = os.path.abspath(tf_checkpoint_path)
logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
# Load weights from TF model
init_vars = tf.train.list_variables(tf_path)
names = []
arrays = []
for name, shape in init_vars:
logger.info(f"Loading TF weight {name} with shape {shape}")
array = tf.train.load_variable(tf_path, name)
names.append(name)
arrays.append(array)
for name, array in zip(names, arrays):
name = name.split("/")
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculate m and v
# which are not required for using pretrained model
if any(
n
in [
"adam_v",
"adam_m",
"AdamWeightDecayOptimizer",
"AdamWeightDecayOptimizer_1",
"global_step",
"seq_relationship",
]
for n in name
):
logger.info(f"Skipping {'/'.join(name)}")
continue
# in case the model is TapasForSequenceClassification, we skip output_bias and output_weights
# since these are not used for classification
if isinstance(model, TapasForSequenceClassification):
if any(n in ["output_bias", "output_weights"] for n in name):
logger.info(f"Skipping {'/'.join(name)}")
continue
# in case the model is TapasModel, we skip output_bias, output_weights, output_bias_cls and output_weights_cls
# since this model does not have MLM and NSP heads
if isinstance(model, TapasModel):
if any(n in ["output_bias", "output_weights", "output_bias_cls", "output_weights_cls"] for n in name):
logger.info(f"Skipping {'/'.join(name)}")
continue
# in case the model is TapasForMaskedLM, we skip the pooler
if isinstance(model, TapasForMaskedLM):
if any(n in ["pooler"] for n in name):
logger.info(f"Skipping {'/'.join(name)}")
continue
# if first scope name starts with "bert", change it to "tapas"
if name[0] == "bert":
name[0] = "tapas"
pointer = model
for m_name in name:
if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
scope_names = re.split(r"_(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "kernel" or scope_names[0] == "gamma":
pointer = getattr(pointer, "weight")
elif scope_names[0] == "beta":
pointer = getattr(pointer, "bias")
# cell selection heads
elif scope_names[0] == "output_bias":
if not isinstance(model, TapasForMaskedLM):
pointer = getattr(pointer, "output_bias")
else:
pointer = getattr(pointer, "bias")
elif scope_names[0] == "output_weights":
pointer = getattr(pointer, "output_weights")
elif scope_names[0] == "column_output_bias":
pointer = getattr(pointer, "column_output_bias")
elif scope_names[0] == "column_output_weights":
pointer = getattr(pointer, "column_output_weights")
# aggregation head
elif scope_names[0] == "output_bias_agg":
pointer = getattr(pointer, "aggregation_classifier")
pointer = getattr(pointer, "bias")
elif scope_names[0] == "output_weights_agg":
pointer = getattr(pointer, "aggregation_classifier")
pointer = getattr(pointer, "weight")
# classification head
elif scope_names[0] == "output_bias_cls":
pointer = getattr(pointer, "classifier")
pointer = getattr(pointer, "bias")
elif scope_names[0] == "output_weights_cls":
pointer = getattr(pointer, "classifier")
pointer = getattr(pointer, "weight")
else:
try:
pointer = getattr(pointer, scope_names[0])
except AttributeError:
logger.info(f"Skipping {'/'.join(name)}")
continue
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
if m_name[-11:] == "_embeddings":
pointer = getattr(pointer, "weight")
elif m_name[-13:] in [f"_embeddings_{i}" for i in range(7)]:
pointer = getattr(pointer, "weight")
elif m_name == "kernel":
array = np.transpose(array)
try:
if pointer.shape != array.shape:
raise ValueError(f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched")
except AssertionError as e:
e.args += (pointer.shape, array.shape)
raise
logger.info(f"Initialize PyTorch weight {name}")
# Added a check to see whether the array is a scalar (because bias terms in Tapas checkpoints can be
# scalar => should first be converted to numpy arrays)
if np.isscalar(array):
array = np.array(array)
pointer.data = torch.from_numpy(array)
return model
class TapasEmbeddings(nn.Module):
"""
Construct the embeddings from word, position and token_type embeddings. Same as BertEmbeddings but with a number of
additional token type embeddings to encode tabular structure.
"""
def __init__(self, config):
super().__init__()
# we do not include config.disabled_features and config.disable_position_embeddings from the original implementation
# word embeddings
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
# position embeddings
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
# token type embeddings
for i, type_vocab_sizes in enumerate(config.type_vocab_sizes):
name = f"token_type_embeddings_{i}"
setattr(self, name, nn.Embedding(type_vocab_sizes, config.hidden_size))
self.number_of_token_type_embeddings = len(config.type_vocab_sizes)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.config = config
def forward(self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None):
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
device = input_ids.device if input_ids is not None else inputs_embeds.device
if position_ids is None:
# create absolute position embeddings
position_ids = torch.arange(seq_length, dtype=torch.long, device=device)
position_ids = position_ids.unsqueeze(0).expand(input_shape)
# when self.config.reset_position_index_per_cell is set to True, create relative position embeddings
if self.config.reset_position_index_per_cell:
# shape (batch_size, seq_len)
col_index = IndexMap(token_type_ids[:, :, 1], self.config.type_vocab_sizes[1], batch_dims=1)
# shape (batch_size, seq_len)
row_index = IndexMap(token_type_ids[:, :, 2], self.config.type_vocab_sizes[2], batch_dims=1)
# shape (batch_size, seq_len)
full_index = ProductIndexMap(col_index, row_index)
# shape (max_rows * max_columns,). First absolute position for every cell
first_position_per_segment = reduce_min(position_ids, full_index)[0]
# ? shape (batch_size, seq_len). First absolute position of the cell for every token
first_position = gather(first_position_per_segment, full_index)
# shape (1, seq_len)
position = torch.arange(seq_length, dtype=torch.long, device=device).unsqueeze(0)
position_ids = torch.min(
torch.as_tensor(self.config.max_position_embeddings - 1, device=device), position - first_position
)
if token_type_ids is None:
token_type_ids = torch.zeros(
(input_shape + self.number_of_token_type_embeddings), dtype=torch.long, device=device
)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
position_embeddings = self.position_embeddings(position_ids)
embeddings = inputs_embeds + position_embeddings
for i in range(self.number_of_token_type_embeddings):
name = f"token_type_embeddings_{i}"
embeddings += getattr(self, name)(token_type_ids[:, :, i])
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
class TapasSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size {config.hidden_size} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
if self.is_decoder:
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in TapasModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput
class TapasSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class TapasAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.self = TapasSelfAttention(config)
self.output = TapasSelfOutput(config)
self.pruned_heads = set()
# Copied from transformers.models.bert.modeling_bert.BertAttention.prune_heads
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
# Copied from transformers.models.bert.modeling_bert.BertAttention.forward
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate
class TapasIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput
class TapasOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class TapasLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = TapasAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = TapasAttention(config)
self.intermediate = TapasIntermediate(config)
self.output = TapasOutput(config)
# Copied from transformers.models.bert.modeling_bert.BertLayer.forward
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
# Copied from transformers.models.bert.modeling_bert.BertLayer.feed_forward_chunk
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
class TapasEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([TapasLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_values, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_values,
output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=all_hidden_states, attentions=all_attentions
)
# Copied from transformers.models.bert.modeling_bert.BertPooler
class TapasPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
# Copied from transformers.models.bert.modeling_bert.BertPredictionHeadTransform with Bert->Tapas
class TapasPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertLMPredictionHead with Bert->Tapas
class TapasLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = TapasPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOnlyMLMHead with Bert->Tapas
class TapasOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = TapasLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
class TapasPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = TapasConfig
base_model_prefix = "tapas"
supports_gradient_checkpointing = True
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, TapasEncoder):
module.gradient_checkpointing = value
TAPAS_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its models (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`TapasConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
TAPAS_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary. Indices can be obtained using [`AutoTokenizer`]. See
[`PreTrainedTokenizer.encode`] and [`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0}, 7)`, *optional*):
Token indices that encode tabular structure. Indices can be obtained using [`AutoTokenizer`]. See this
class for more info.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. If
`reset_position_index_per_cell` of [`TapasConfig`] is set to `True`, relative position embeddings will be
used. Selected in the range `[0, config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`: - 1
indicates the head is **not masked**, - 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare Tapas Model transformer outputting raw hidden-states without any specific head on top.",
TAPAS_START_DOCSTRING,
)
class TapasModel(TapasPreTrainedModel):
"""
This class is a small change compared to [`BertModel`], taking into account the additional token type ids.
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
"""
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = TapasEmbeddings(config)
self.encoder = TapasEncoder(config)
self.pooler = TapasPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasModel
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasModel.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
if token_type_ids is None:
token_type_ids = torch.zeros(
(*input_shape, len(self.config.type_vocab_sizes)), dtype=torch.long, device=device
)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D ou 3D attention mask is provided for the cross-attention
# we need to make broadcastabe to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids, position_ids=position_ids, token_type_ids=token_type_ids, inputs_embeds=inputs_embeds
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
@add_start_docstrings("""Tapas Model with a `language modeling` head on top.""", TAPAS_START_DOCSTRING)
class TapasForMaskedLM(TapasPreTrainedModel):
_keys_to_ignore_on_load_missing = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
config_class = TapasConfig
base_model_prefix = "tapas"
def __init__(self, config):
super().__init__(config)
self.tapas = TapasModel(config, add_pooling_layer=False)
self.cls = TapasOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForMaskedLM
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasForMaskedLM.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> inputs = tokenizer(
... table=table, queries="How many [MASK] has George [MASK] played in?", return_tensors="pt"
... )
>>> labels = tokenizer(
... table=table, queries="How many movies has George Clooney played in?", return_tensors="pt"
... )["input_ids"]
>>> outputs = model(**inputs, labels=labels)
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.tapas(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Tapas Model with a cell selection head and optional aggregation head on top for question-answering tasks on tables
(linear layers on top of the hidden-states output to compute `logits` and optional `logits_aggregation`), e.g. for
SQA, WTQ or WikiSQL-supervised tasks.
""",
TAPAS_START_DOCSTRING,
)
class TapasForQuestionAnswering(TapasPreTrainedModel):
def __init__(self, config: TapasConfig):
super().__init__(config)
# base model
self.tapas = TapasModel(config)
# dropout (only used when training)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# cell selection heads
if config.init_cell_selection_weights_to_zero:
# init_cell_selection_weights_to_zero: Whether the initial weights should be
# set to 0. This ensures that all tokens have the same prior probability.
self.output_weights = nn.Parameter(torch.zeros(config.hidden_size))
self.column_output_weights = nn.Parameter(torch.zeros(config.hidden_size))
else:
self.output_weights = nn.Parameter(torch.empty(config.hidden_size))
nn.init.normal_(
self.output_weights, std=config.initializer_range
) # here, a truncated normal is used in the original implementation
self.column_output_weights = nn.Parameter(torch.empty(config.hidden_size))
nn.init.normal_(
self.column_output_weights, std=config.initializer_range
) # here, a truncated normal is used in the original implementation
self.output_bias = nn.Parameter(torch.zeros([]))
self.column_output_bias = nn.Parameter(torch.zeros([]))
# aggregation head
if config.num_aggregation_labels > 0:
self.aggregation_classifier = nn.Linear(config.hidden_size, config.num_aggregation_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TableQuestionAnsweringOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
table_mask: Optional[torch.LongTensor] = None,
labels: Optional[torch.LongTensor] = None,
aggregation_labels: Optional[torch.LongTensor] = None,
float_answer: Optional[torch.FloatTensor] = None,
numeric_values: Optional[torch.FloatTensor] = None,
numeric_values_scale: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, TableQuestionAnsweringOutput]:
r"""
table_mask (`torch.LongTensor` of shape `(batch_size, seq_length)`, *optional*):
Mask for the table. Indicates which tokens belong to the table (1). Question tokens, table headers and
padding are 0.
labels (`torch.LongTensor` of shape `(batch_size, seq_length)`, *optional*):
Labels per token for computing the hierarchical cell selection loss. This encodes the positions of the
answer appearing in the table. Can be obtained using [`AutoTokenizer`].
- 1 for tokens that are **part of the answer**,
- 0 for tokens that are **not part of the answer**.
aggregation_labels (`torch.LongTensor` of shape `(batch_size, )`, *optional*):
Aggregation function index for every example in the batch for computing the aggregation loss. Indices
should be in `[0, ..., config.num_aggregation_labels - 1]`. Only required in case of strong supervision for
aggregation (WikiSQL-supervised).
float_answer (`torch.FloatTensor` of shape `(batch_size, )`, *optional*):
Float answer for every example in the batch. Set to *float('nan')* for cell selection questions. Only
required in case of weak supervision (WTQ) to calculate the aggregate mask and regression loss.
numeric_values (`torch.FloatTensor` of shape `(batch_size, seq_length)`, *optional*):
Numeric values of every token, NaN for tokens which are not numeric values. Can be obtained using
[`AutoTokenizer`]. Only required in case of weak supervision for aggregation (WTQ) to calculate the
regression loss.
numeric_values_scale (`torch.FloatTensor` of shape `(batch_size, seq_length)`, *optional*):
Scale of the numeric values of every token. Can be obtained using [`AutoTokenizer`]. Only required in case
of weak supervision for aggregation (WTQ) to calculate the regression loss.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForQuestionAnswering
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-wtq")
>>> model = TapasForQuestionAnswering.from_pretrained("google/tapas-base-finetuned-wtq")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> logits_aggregation = outputs.logits_aggregation
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.tapas(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
pooled_output = outputs[1]
sequence_output = self.dropout(sequence_output)
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
device = input_ids.device if input_ids is not None else inputs_embeds.device
# Construct indices for the table.
if token_type_ids is None:
token_type_ids = torch.zeros(
(*input_shape, len(self.config.type_vocab_sizes)), dtype=torch.long, device=device
)
token_types = [
"segment_ids",
"column_ids",
"row_ids",
"prev_labels",
"column_ranks",
"inv_column_ranks",
"numeric_relations",
]
row_ids = token_type_ids[:, :, token_types.index("row_ids")]
column_ids = token_type_ids[:, :, token_types.index("column_ids")]
row_index = IndexMap(
indices=torch.min(row_ids, torch.as_tensor(self.config.max_num_rows - 1, device=row_ids.device)),
num_segments=self.config.max_num_rows,
batch_dims=1,
)
col_index = IndexMap(
indices=torch.min(column_ids, torch.as_tensor(self.config.max_num_columns - 1, device=column_ids.device)),
num_segments=self.config.max_num_columns,
batch_dims=1,
)
cell_index = ProductIndexMap(row_index, col_index)
# Masks.
input_shape = input_ids.size() if input_ids is not None else inputs_embeds.size()[:-1]
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
# Table cells only, without question tokens and table headers.
if table_mask is None:
table_mask = torch.where(row_ids > 0, torch.ones_like(row_ids), torch.zeros_like(row_ids))
# torch.FloatTensor[batch_size, seq_length]
input_mask_float = attention_mask.float().to(device)
table_mask_float = table_mask.float().to(device)
# Mask for cells that exist in the table (i.e. that are not padding).
cell_mask, _ = reduce_mean(input_mask_float, cell_index)
# Compute logits per token. These are used to select individual cells.
logits = compute_token_logits(sequence_output, self.config.temperature, self.output_weights, self.output_bias)
# Compute logits per column. These are used to select a column.
column_logits = None
if self.config.select_one_column:
column_logits = compute_column_logits(
sequence_output,
self.column_output_weights,
self.column_output_bias,
cell_index,
cell_mask,
self.config.allow_empty_column_selection,
)
# Aggregation logits
logits_aggregation = None
if self.config.num_aggregation_labels > 0:
logits_aggregation = self.aggregation_classifier(pooled_output)
# Total loss calculation
total_loss = 0.0
calculate_loss = False
if labels is not None:
calculate_loss = True
is_supervised = not self.config.num_aggregation_labels > 0 or not self.config.use_answer_as_supervision
# Semi-supervised cell selection in case of no aggregation:
# If the answer (the denotation) appears directly in the table we might
# select the answer without applying any aggregation function. There are
# some ambiguous cases, see utils._calculate_aggregate_mask for more info.
# `aggregate_mask` is 1 for examples where we chose to aggregate and 0
# for examples where we chose to select the answer directly.
# `labels` encodes the positions of the answer appearing in the table.
if is_supervised:
aggregate_mask = None
else:
if float_answer is not None:
assert (
labels.shape[0] == float_answer.shape[0]
), "Make sure the answers are a FloatTensor of shape (batch_size,)"
# <float32>[batch_size]
aggregate_mask = _calculate_aggregate_mask(
float_answer,
pooled_output,
self.config.cell_selection_preference,
labels,
self.aggregation_classifier,
)
else:
raise ValueError("You have to specify float answers in order to calculate the aggregate mask")
# Cell selection log-likelihood
if self.config.average_logits_per_cell:
logits_per_cell, _ = reduce_mean(logits, cell_index)
logits = gather(logits_per_cell, cell_index)
dist_per_token = torch.distributions.Bernoulli(logits=logits)
# Compute cell selection loss per example.
selection_loss_per_example = None
if not self.config.select_one_column:
weight = torch.where(
labels == 0,
torch.ones_like(labels, dtype=torch.float32),
self.config.positive_label_weight * torch.ones_like(labels, dtype=torch.float32),
)
selection_loss_per_token = -dist_per_token.log_prob(labels) * weight
selection_loss_per_example = torch.sum(selection_loss_per_token * input_mask_float, dim=1) / (
torch.sum(input_mask_float, dim=1) + EPSILON_ZERO_DIVISION
)
else:
selection_loss_per_example, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
dist_per_token = torch.distributions.Bernoulli(logits=logits)
# Supervised cell selection
if self.config.disable_per_token_loss:
pass
elif is_supervised:
total_loss += torch.mean(selection_loss_per_example)
else:
# For the not supervised case, do not assign loss for cell selection
total_loss += torch.mean(selection_loss_per_example * (1.0 - aggregate_mask))
# Semi-supervised regression loss and supervised loss for aggregations
if self.config.num_aggregation_labels > 0:
if is_supervised:
# Note that `aggregate_mask` is None if the setting is supervised.
if aggregation_labels is not None:
assert (
labels.shape[0] == aggregation_labels.shape[0]
), "Make sure the aggregation labels are a LongTensor of shape (batch_size,)"
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
else:
raise ValueError(
"You have to specify aggregation labels in order to calculate the aggregation loss"
)
else:
# Set aggregation labels to zeros
aggregation_labels = torch.zeros(labels.shape[0], dtype=torch.long, device=labels.device)
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
if self.config.use_answer_as_supervision:
if numeric_values is not None and numeric_values_scale is not None:
assert numeric_values.shape == numeric_values_scale.shape
# Add regression loss for numeric answers which require aggregation.
answer_loss, large_answer_loss_mask = _calculate_regression_loss(
float_answer,
aggregate_mask,
dist_per_token,
numeric_values,
numeric_values_scale,
table_mask_float,
logits_aggregation,
self.config,
)
per_example_additional_loss += answer_loss
# Zero loss for examples with answer_loss > cutoff.
per_example_additional_loss *= large_answer_loss_mask
else:
raise ValueError(
"You have to specify numeric values and numeric values scale in order to calculate the"
" regression loss"
)
total_loss += torch.mean(per_example_additional_loss)
else:
# if no label ids are provided, set them to zeros in order to properly compute logits
labels = torch.zeros_like(logits)
_, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
if not return_dict:
output = (logits, logits_aggregation) + outputs[2:]
return ((total_loss,) + output) if calculate_loss else output
return TableQuestionAnsweringOutput(
loss=total_loss if calculate_loss else None,
logits=logits,
logits_aggregation=logits_aggregation,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
Tapas Model with a sequence classification head on top (a linear layer on top of the pooled output), e.g. for table
entailment tasks, such as TabFact (Chen et al., 2020).
""",
TAPAS_START_DOCSTRING,
)
class TapasForSequenceClassification(TapasPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.tapas = TapasModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy). Note: this is called
"classification_class_index" in the original implementation.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForSequenceClassification
>>> import torch
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> model = TapasForSequenceClassification.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = [
... "There is only one actor who is 45 years old",
... "There are 3 actors which played in more than 60 movies",
... ]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="pt")
>>> labels = torch.tensor([1, 0]) # 1 means entailed, 0 means refuted
>>> outputs = model(**inputs, labels=labels)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.tapas(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
""" TAPAS utilities."""
class AverageApproximationFunction(str, enum.Enum):
RATIO = "ratio"
FIRST_ORDER = "first_order"
SECOND_ORDER = "second_order"
# Beginning of everything related to segmented tensors
class IndexMap(object):
"""Index grouping entries within a tensor."""
def __init__(self, indices, num_segments, batch_dims=0):
"""
Creates an index
Args:
indices (`torch.LongTensor`, same shape as a *values* Tensor to which the indices refer):
Tensor containing the indices.
num_segments (`torch.LongTensor`):
Scalar tensor, the number of segments. All elements in a batched segmented tensor must have the same
number of segments (although many segments can be empty).
batch_dims (`int`, *optional*, defaults to 0):
The number of batch dimensions. The first *batch_dims* dimensions of a SegmentedTensor are treated as
batch dimensions. Segments in different batch elements are always distinct even if they have the same
index.
"""
self.indices = torch.as_tensor(indices)
self.num_segments = torch.as_tensor(num_segments, device=indices.device)
self.batch_dims = batch_dims
def batch_shape(self):
return self.indices.size()[: self.batch_dims] # returns a torch.Size object
class ProductIndexMap(IndexMap):
"""The product of two indices."""
def __init__(self, outer_index, inner_index):
"""
Combines indices i and j into pairs (i, j). The result is an index where each segment (i, j) is the
intersection of segments i and j. For example if the inputs represent table cells indexed by respectively rows
and columns the output will be a table indexed by (row, column) pairs, i.e. by cell. The implementation
combines indices {0, .., n - 1} and {0, .., m - 1} into {0, .., nm - 1}. The output has *num_segments* equal to
*outer_index.num_segments* * *inner_index.num_segments*
Args:
outer_index (`IndexMap`):
IndexMap.
inner_index (`IndexMap`):
IndexMap, must have the same shape as *outer_index*.
"""
if outer_index.batch_dims != inner_index.batch_dims:
raise ValueError("outer_index.batch_dims and inner_index.batch_dims must be the same.")
super().__init__(
indices=(inner_index.indices + outer_index.indices * inner_index.num_segments),
num_segments=inner_index.num_segments * outer_index.num_segments,
batch_dims=inner_index.batch_dims,
)
self.outer_index = outer_index
self.inner_index = inner_index
def project_outer(self, index):
"""Projects an index with the same index set onto the outer components."""
indices = torch_int_div(index.indices, self.inner_index.num_segments).type(torch.long)
return IndexMap(indices=indices, num_segments=self.outer_index.num_segments, batch_dims=index.batch_dims)
def project_inner(self, index):
"""Projects an index with the same index set onto the inner components."""
return IndexMap(
indices=torch.fmod(index.indices, self.inner_index.num_segments)
.type(torch.float)
.floor()
.type(torch.long),
num_segments=self.inner_index.num_segments,
batch_dims=index.batch_dims,
)
def gather(values, index, name="segmented_gather"):
"""
Gathers from *values* using the index map. For each element in the domain of the index map this operation looks up
a value for that index in *values*. Two elements from the same segment always get assigned the same value.
Args:
values (`torch.Tensor` of shape (B1, ..., Bn, num_segments, V1, ...)):
Tensor with segment values.
index (`IndexMap` of shape (B1, ..., Bn, I1, ..., Ik)):
IndexMap.
name (`str`, *optional*, defaults to 'segmented_gather'):
Name for the operation. Currently not used
Returns:
`tuple(torch.Tensor)`: Tensor of shape (B1, ..., Bn, I1, ..., Ik, V1, ...) with the gathered values.
"""
indices = index.indices
# first, check whether the indices of the index represent scalar values (i.e. not vectorized)
if len(values.shape[index.batch_dims :]) < 2:
return torch.gather(
values,
index.batch_dims,
indices.view(
values.size()[0], -1
), # torch.gather expects index to have the same number of dimensions as values
).view(indices.size())
else:
# this means we have a vectorized version
# we have to adjust the index
indices = indices.unsqueeze(-1).expand(values.shape)
return torch.gather(values, index.batch_dims, indices)
def flatten(index, name="segmented_flatten"):
"""
Flattens a batched index map (which is typically of shape batch_size, seq_length) to a 1d index map. This operation
relabels the segments to keep batch elements distinct. The k-th batch element will have indices shifted by
*num_segments* * (k - 1). The result is a tensor with *num_segments* multiplied by the number of elements in the
batch.
Args:
index (`IndexMap`):
IndexMap to flatten.
name (`str`, *optional*, defaults to 'segmented_flatten'):
Name for the operation. Currently not used
Returns:
(`IndexMap`): The flattened IndexMap.
"""
# first, get batch_size as scalar tensor
batch_size = torch.prod(torch.tensor(list(index.batch_shape())))
# next, create offset as 1-D tensor of length batch_size,
# and multiply element-wise by num segments (to offset different elements in the batch) e.g. if batch size is 2: [0, 64]
offset = torch.arange(start=0, end=batch_size, device=index.num_segments.device) * index.num_segments
offset = offset.view(index.batch_shape())
for _ in range(index.batch_dims, len(index.indices.size())): # typically range(1,2)
offset = offset.unsqueeze(-1)
indices = offset + index.indices
return IndexMap(indices=indices.view(-1), num_segments=index.num_segments * batch_size, batch_dims=0)
def range_index_map(batch_shape, num_segments, name="range_index_map"):
"""
Constructs an index map equal to range(num_segments).
Args:
batch_shape (`torch.Size`):
Batch shape
num_segments (`int`):
Number of segments
name (`str`, *optional*, defaults to 'range_index_map'):
Name for the operation. Currently not used
Returns:
(`IndexMap`): IndexMap of shape batch_shape with elements equal to range(num_segments).
"""
batch_shape = torch.as_tensor(
batch_shape, dtype=torch.long
) # create a rank 1 tensor vector containing batch_shape (e.g. [2])
assert len(batch_shape.size()) == 1
num_segments = torch.as_tensor(num_segments) # create a rank 0 tensor (scalar) containing num_segments (e.g. 64)
assert len(num_segments.size()) == 0
indices = torch.arange(
start=0, end=num_segments, device=num_segments.device
) # create a rank 1 vector with num_segments elements
new_tensor = torch.cat(
[torch.ones_like(batch_shape, dtype=torch.long, device=num_segments.device), num_segments.unsqueeze(dim=0)],
dim=0,
)
# new_tensor is just a vector of [1 64] for example (assuming only 1 batch dimension)
new_shape = [int(x) for x in new_tensor.tolist()]
indices = indices.view(new_shape)
multiples = torch.cat([batch_shape, torch.as_tensor([1])], dim=0)
indices = indices.repeat(multiples.tolist())
# equivalent (in Numpy:)
# indices = torch.as_tensor(np.tile(indices.numpy(), multiples.tolist()))
return IndexMap(indices=indices, num_segments=num_segments, batch_dims=list(batch_shape.size())[0])
def _segment_reduce(values, index, segment_reduce_fn, name):
"""
Applies a segment reduction segment-wise.
Args:
values (`torch.Tensor`):
Tensor with segment values.
index (`IndexMap`):
IndexMap.
segment_reduce_fn (`str`):
Name for the reduce operation. One of "sum", "mean", "max" or "min".
name (`str`):
Name for the operation. Currently not used
Returns:
(`IndexMap`): IndexMap of shape batch_shape with elements equal to range(num_segments).
"""
# Flatten the batch dimensions, as segments ops (scatter) do not support batching.
# However if `values` has extra dimensions to the right keep them
# unflattened. Segmented ops support vector-valued operations.
flat_index = flatten(index)
vector_shape = values.size()[len(index.indices.size()) :] # torch.Size object
flattened_shape = torch.cat(
[torch.as_tensor([-1], dtype=torch.long), torch.as_tensor(vector_shape, dtype=torch.long)], dim=0
)
# changed "view" by "reshape" in the following line
flat_values = values.reshape(flattened_shape.tolist())
out = torch.zeros(int(flat_index.num_segments), dtype=torch.float, device=flat_values.device)
segment_means = out.scatter_reduce(
dim=0, index=flat_index.indices.long(), src=flat_values.float(), reduce=segment_reduce_fn, include_self=False
)
# Unflatten the values.
new_shape = torch.cat(
[
torch.as_tensor(index.batch_shape(), dtype=torch.long),
torch.as_tensor([index.num_segments], dtype=torch.long),
torch.as_tensor(vector_shape, dtype=torch.long),
],
dim=0,
)
output_values = segment_means.clone().view(new_shape.tolist()).to(values.dtype)
output_index = range_index_map(index.batch_shape(), index.num_segments)
return output_values, output_index
def reduce_sum(values, index, name="segmented_reduce_sum"):
"""
Sums a tensor over its segments.
Outputs 0 for empty segments.
This operations computes the sum over segments, with support for:
- Batching using the first dimensions [B1, B2, ..., Bn]. Each element in a batch can have different indices.
- Vectorization using the last dimension [V1, V2, ...]. If they are present, the output will be a sum of
vectors rather than scalars. Only the middle dimensions [I1, ..., Ik] are reduced by the operation.
Args:
values (`torch.Tensor` of shape [B1, B2, ..., Bn, I1, .., Ik, V1, V2, ..]):
Tensor containing the values of which the sum must be taken segment-wise.
index (`IndexMap`, indices are of shape [B1, B2, ..., Bn, I1, .., Ik].):
Index defining the segments.
name (`str`, *optional*, defaults to 'segmented_reduce_sum'):
Name for the operation. Currently not used
Returns:
output_values (`torch.Tensor`of shape [B1, B2, ..., Bn, num_segments, V1, V2, ..]): Tensor containing the
output values. output_index (`IndexMap`): IndexMap with shape [B1, B2, ..., Bn, num_segments]. .
"""
return _segment_reduce(values, index, "sum", name)
def reduce_mean(values, index, name="segmented_reduce_mean"):
"""
Averages a tensor over its segments.
Outputs 0 for empty segments.
This operations computes the mean over segments, with support for:
- Batching using the first dimensions [B1, B2, ..., Bn]. Each element in a batch can have different indices.
- Vectorization using the last dimension [V1, V2, ...]. If they are present, the output will be a mean of
vectors rather than scalars.
Only the middle dimensions [I1, ..., Ik] are reduced by the operation.
Args:
values (`torch.Tensor` of shape [B1, B2, ..., Bn, I1, .., Ik, V1, V2, ..]):
Tensor containing the values of which the mean must be taken segment-wise.
index (`IndexMap`, indices are of shape [B1, B2, ..., Bn, I1, .., Ik].):
Index defining the segments.
name (`str`, *optional*, defaults to 'segmented_reduce_sum'):
Name for the operation. Currently not used
Returns:
output_values (`torch.Tensor`of shape [B1, B2, ..., Bn, num_segments, V1, V2, ..]): Tensor containing the
output values. output_index (`IndexMap`): IndexMap with shape [B1, B2, ..., Bn, num_segments].
"""
return _segment_reduce(values, index, "mean", name)
def reduce_max(values, index, name="segmented_reduce_max"):
"""
Computes the maximum over segments.
This operation computes the maximum over segments, with support for:
- Batching using the first dimensions [B1, B2, ..., Bn]. Each element in a batch can have different indices.
- Vectorization using the last dimension [V1, V2, ...]. If they are present, the output will be an element-wise
maximum of vectors rather than scalars.
Only the middle dimensions [I1, ..., Ik] are reduced by the operation.
Args:
values (`torch.Tensor` of shape [B1, B2, ..., Bn, I1, .., Ik, V1, V2, ..]):
Tensor containing the values of which the max must be taken segment-wise.
index (`IndexMap`, indices are of shape [B1, B2, ..., Bn, I1, .., Ik].):
Index defining the segments.
name (`str`, *optional*, defaults to 'segmented_reduce_sum'):
Name for the operation. Currently not used
Returns:
output_values (`torch.Tensor`of shape [B1, B2, ..., Bn, num_segments, V1, V2, ..]): Tensor containing the
output values. output_index (`IndexMap`): IndexMap with shape [B1, B2, ..., Bn, num_segments].
"""
return _segment_reduce(values, index, "amax", name)
def reduce_min(values, index, name="segmented_reduce_min"):
"""
Computes the minimum over segments.
This operations computes the minimum over segments, with support for:
- Batching using the first dimensions [B1, B2, ..., Bn]. Each element in a batch can have different indices.
- Vectorization using the last dimension [V1, V2, ...]. If they are present, the output will be an element-wise
minimum of vectors rather than scalars.
Only the middle dimensions [I1, ..., Ik] are reduced by the operation.
Args:
values (`torch.Tensor` of shape [B1, B2, ..., Bn, I1, .., Ik, V1, V2, ..]):
Tensor containing the values of which the min must be taken segment-wise.
index (`IndexMap`, indices are of shape [B1, B2, ..., Bn, I1, .., Ik].):
Index defining the segments.
name (`str`, *optional*, defaults to 'segmented_reduce_sum'):
Name for the operation. Currently not used
Returns:
output_values (`torch.Tensor`of shape [B1, B2, ..., Bn, num_segments, V1, V2, ..]): Tensor containing the
output values. output_index (`IndexMap`): IndexMap with shape [B1, B2, ..., Bn, num_segments].
"""
return _segment_reduce(values, index, "amin", name)
# End of everything related to segmented tensors
def compute_column_logits(
sequence_output, column_output_weights, column_output_bias, cell_index, cell_mask, allow_empty_column_selection
):
"""
Computes the column logits.
Args:
sequence_output (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Also known as last_hidden_state. Sequence of hidden-states at the output of the last layer of the model.
column_output_weights (`torch.FloatTensor` of shape `(hidden_size)`):
Weights of the linear layer for column selection.
column_output_bias (`torch.FloatTensor` of shape `()`):
Bias of the linear layer for column selection.
cell_index (`ProductIndexMap`):
Index that groups tokens into cells.
cell_mask (`torch.FloatTensor` of shape `(batch_size, max_num_rows * max_num_cols)`):
Mask for cells that exist in the table (i.e. that are not padding).
allow_empty_column_selection (`bool`):
Whether to allow not to select any column
Returns:
column_logits (`torch.FloatTensor`of shape `(batch_size, max_num_cols)`): Tensor containing the column logits
for every example in the batch.
"""
# First, compute the token logits (batch_size, seq_len) - without temperature
token_logits = torch.einsum("bsj,j->bs", sequence_output, column_output_weights) + column_output_bias
# Next, average the logits per cell (batch_size, max_num_cols*max_num_rows)
cell_logits, cell_logits_index = reduce_mean(token_logits, cell_index)
# Finally, average the logits per column (batch_size, max_num_cols)
column_index = cell_index.project_inner(cell_logits_index)
column_logits, out_index = reduce_sum(cell_logits * cell_mask, column_index)
cell_count, _ = reduce_sum(cell_mask, column_index)
column_logits /= cell_count + EPSILON_ZERO_DIVISION
# Mask columns that do not appear in the example.
is_padding = torch.logical_and(cell_count < 0.5, ~torch.eq(out_index.indices, 0))
column_logits += CLOSE_ENOUGH_TO_LOG_ZERO * torch.as_tensor(
is_padding, dtype=torch.float32, device=is_padding.device
)
if not allow_empty_column_selection:
column_logits += CLOSE_ENOUGH_TO_LOG_ZERO * torch.as_tensor(
torch.eq(out_index.indices, 0), dtype=torch.float32, device=out_index.indices.device
)
return column_logits
def _single_column_cell_selection_loss(token_logits, column_logits, labels, cell_index, col_index, cell_mask):
"""
Computes the loss for cell selection constrained to a single column. The loss is a hierarchical log-likelihood. The
model first predicts a column and then selects cells within that column (conditioned on the column). Cells outside
the selected column are never selected.
Args:
token_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Tensor containing the logits per token.
column_logits (`torch.FloatTensor` of shape `(batch_size, max_num_cols)`):
Tensor containing the logits per column.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Labels per token.
cell_index (`ProductIndexMap`):
Index that groups tokens into cells.
col_index (`IndexMap`):
Index that groups tokens into columns.
cell_mask (`torch.FloatTensor` of shape `(batch_size, max_num_rows * max_num_cols)`):
Mask for cells that exist in the table (i.e. that are not padding).
Returns:
selection_loss_per_example (`torch.FloatTensor` of shape `(batch_size,)`): Loss for each example. logits
(`torch.FloatTensor` of shape `(batch_size, sequence_length)`): New logits which are only allowed to select
cells in a single column. Logits outside of the most likely column according to *column_logits* will be set to
a very low value (such that the probabilities are 0).
"""
# Part 1: column loss
# First find the column we should select. We use the column with maximum number of selected cells.
labels_per_column, _ = reduce_sum(torch.as_tensor(labels, dtype=torch.float32, device=labels.device), col_index)
# shape of labels_per_column is (batch_size, max_num_cols). It contains the number of label ids for every column, for every example
column_label = torch.argmax(labels_per_column, dim=-1) # shape (batch_size,)
# Check if there are no selected cells in the column. In that case the model
# should predict the special column id 0, which means "select nothing".
no_cell_selected = torch.eq(
torch.max(labels_per_column, dim=-1)[0], 0
) # no_cell_selected is of shape (batch_size,) and equals True
# if an example of the batch has no cells selected (i.e. if there are no labels set to 1 for that example)
column_label = torch.where(
no_cell_selected.view(column_label.size()), torch.zeros_like(column_label), column_label
)
column_dist = torch.distributions.Categorical(logits=column_logits) # shape (batch_size, max_num_cols)
column_loss_per_example = -column_dist.log_prob(column_label)
# Part 2: cell loss
# Reduce the labels and logits to per-cell from per-token.
# logits_per_cell: shape (batch_size, max_num_rows*max_num_cols) i.e. (batch_size, 64*32)
logits_per_cell, _ = reduce_mean(token_logits, cell_index)
# labels_per_cell: shape (batch_size, 64*32), indicating whether each cell should be selected (1) or not (0)
labels_per_cell, labels_index = reduce_max(
torch.as_tensor(labels, dtype=torch.long, device=labels.device), cell_index
)
# Mask for the selected column.
# column_id_for_cells: shape (batch_size, 64*32), indicating to which column each cell belongs
column_id_for_cells = cell_index.project_inner(labels_index).indices
# column_mask: shape (batch_size, 64*32), equal to 1 if cell belongs to column to be selected
column_mask = torch.as_tensor(
torch.eq(column_id_for_cells, torch.unsqueeze(column_label, dim=-1)),
dtype=torch.float32,
device=cell_mask.device,
)
# Compute the log-likelihood for cells, but only for the selected column.
cell_dist = torch.distributions.Bernoulli(logits=logits_per_cell) # shape (batch_size, 64*32)
cell_log_prob = cell_dist.log_prob(labels_per_cell.type(torch.float32)) # shape(batch_size, 64*32)
cell_loss = -torch.sum(cell_log_prob * column_mask * cell_mask, dim=1)
# We need to normalize the loss by the number of cells in the column.
cell_loss /= torch.sum(column_mask * cell_mask, dim=1) + EPSILON_ZERO_DIVISION
selection_loss_per_example = column_loss_per_example
selection_loss_per_example += torch.where(
no_cell_selected.view(selection_loss_per_example.size()),
torch.zeros_like(selection_loss_per_example),
cell_loss,
)
# Set the probs outside the selected column (selected by the *model*)
# to 0. This ensures backwards compatibility with models that select
# cells from multiple columns.
selected_column_id = torch.as_tensor(
torch.argmax(column_logits, dim=-1), dtype=torch.long, device=column_logits.device
) # shape (batch_size,)
# selected_column_mask: shape (batch_size, 64*32), equal to 1 if cell belongs to column selected by the model
selected_column_mask = torch.as_tensor(
torch.eq(column_id_for_cells, torch.unsqueeze(selected_column_id, dim=-1)),
dtype=torch.float32,
device=selected_column_id.device,
)
# Never select cells with the special column id 0.
selected_column_mask = torch.where(
torch.eq(column_id_for_cells, 0).view(selected_column_mask.size()),
torch.zeros_like(selected_column_mask),
selected_column_mask,
)
new_logits_per_cell = logits_per_cell + CLOSE_ENOUGH_TO_LOG_ZERO * (1.0 - cell_mask * selected_column_mask)
logits = gather(new_logits_per_cell, cell_index)
return selection_loss_per_example, logits
def compute_token_logits(sequence_output, temperature, output_weights, output_bias):
"""
Computes logits per token
Args:
sequence_output (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Also known as last_hidden_state. Sequence of hidden-states at the output of the last layer of the model.
temperature (`float`):
Temperature for the Bernoulli distribution.
output_weights (`torch.FloatTensor` of shape `(hidden_size,)`):
Weights of the linear layer for cell selection.
output_bias (`torch.FloatTensor` of shape `()`):
Bias of the linear layer for cell selection
Returns:
logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`): Logits per token.
"""
logits = (torch.einsum("bsj,j->bs", sequence_output, output_weights) + output_bias) / temperature
return logits
def _calculate_aggregate_mask(answer, pooled_output, cell_selection_preference, labels, aggregation_classifier):
"""
Finds examples where the model should select cells with no aggregation.
Returns a mask that determines for which examples should the model select answers directly from the table, without
any aggregation function. If the answer is a piece of text the case is unambiguous as aggregation functions only
apply to numbers. If the answer is a number but does not appear in the table then we must use some aggregation
case. The ambiguous case is when the answer is a number that also appears in the table. In this case we use the
aggregation function probabilities predicted by the model to decide whether to select or aggregate. The threshold
for this is a hyperparameter *cell_selection_preference*
Args:
answer (`torch.FloatTensor` of shape `(batch_size, )`):
Answer for every example in the batch. Nan if there is no scalar answer.
pooled_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Output of the pooler (BertPooler) on top of the encoder layer.
cell_selection_preference (`float`):
Preference for cell selection in ambiguous cases.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Labels per token. aggregation_classifier (`torch.nn.Linear`): Aggregation head
Returns:
aggregate_mask (`torch.FloatTensor` of shape `(batch_size,)`): A mask set to 1 for examples that should use
aggregation functions.
"""
# torch.FloatTensor(batch_size,)
aggregate_mask_init = torch.logical_not(torch.isnan(answer)).type(torch.FloatTensor).to(answer.device)
logits_aggregation = aggregation_classifier(pooled_output)
dist_aggregation = torch.distributions.categorical.Categorical(logits=logits_aggregation)
# Index 0 corresponds to "no aggregation".
aggregation_ops_total_mass = torch.sum(dist_aggregation.probs[:, 1:], dim=1)
# Cell selection examples according to current model.
is_pred_cell_selection = aggregation_ops_total_mass <= cell_selection_preference
# Examples with non-empty cell selection supervision.
is_cell_supervision_available = torch.sum(labels, dim=1) > 0
# torch.where is not equivalent to tf.where (in tensorflow 1)
# hence the added .view on the condition to match the shape of the first tensor
aggregate_mask = torch.where(
torch.logical_and(is_pred_cell_selection, is_cell_supervision_available).view(aggregate_mask_init.size()),
torch.zeros_like(aggregate_mask_init, dtype=torch.float32),
aggregate_mask_init,
)
aggregate_mask = aggregate_mask.detach()
return aggregate_mask
def _calculate_aggregation_loss_known(
logits_aggregation, aggregate_mask, aggregation_labels, use_answer_as_supervision, num_aggregation_labels
):
"""
Calculates aggregation loss when its type is known during training.
In the weakly supervised setting, the only known information is that for cell selection examples, "no aggregation"
should be predicted. For other examples (those that require aggregation), no loss is accumulated. In the setting
where aggregation type is always known, standard cross entropy loss is accumulated for all examples
Args:
logits_aggregation (`torch.FloatTensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
aggregate_mask (`torch.FloatTensor` of shape `(batch_size, )`):
A mask set to 1 for examples that should use aggregation functions.
aggregation_labels (`torch.LongTensor` of shape `(batch_size, )`):
Aggregation function id for every example in the batch.
use_answer_as_supervision (`bool`, *optional*):
Whether to use the answer as the only supervision for aggregation examples.
num_aggregation_labels (`int`, *optional*, defaults to 0):
The number of aggregation operators to predict.
Returns:
aggregation_loss_known (`torch.FloatTensor` of shape `(batch_size,)`): Aggregation loss (when its type is known
during training) per example.
"""
if use_answer_as_supervision:
# Prepare "no aggregation" targets for cell selection examples.
target_aggregation = torch.zeros_like(aggregate_mask, dtype=torch.long)
else:
# Use aggregation supervision as the target.
target_aggregation = aggregation_labels
one_hot_labels = nn.functional.one_hot(target_aggregation, num_classes=num_aggregation_labels).type(torch.float32)
log_probs = nn.functional.log_softmax(logits_aggregation, dim=-1)
# torch.FloatTensor[batch_size]
per_example_aggregation_intermediate = -torch.sum(one_hot_labels * log_probs, dim=-1)
if use_answer_as_supervision:
# Accumulate loss only for examples requiring cell selection
# (no aggregation).
return per_example_aggregation_intermediate * (1 - aggregate_mask)
else:
return per_example_aggregation_intermediate
def _calculate_aggregation_loss_unknown(logits_aggregation, aggregate_mask):
"""
Calculates aggregation loss in the case of answer supervision.
Args:
logits_aggregation (`torch.FloatTensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
aggregate_mask (`torch.FloatTensor` of shape `(batch_size, )`):
A mask set to 1 for examples that should use aggregation functions
Returns:
aggregation_loss_unknown (`torch.FloatTensor` of shape `(batch_size,)`): Aggregation loss (in case of answer
supervision) per example.
"""
dist_aggregation = torch.distributions.categorical.Categorical(logits=logits_aggregation)
# Index 0 corresponds to "no aggregation".
aggregation_ops_total_mass = torch.sum(dist_aggregation.probs[:, 1:], dim=1)
# Predict some aggregation in case of an answer that needs aggregation.
# This increases the probability of all aggregation functions, in a way
# similar to MML, but without considering whether the function gives the
# correct answer.
return -torch.log(aggregation_ops_total_mass) * aggregate_mask
def _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
use_answer_as_supervision,
num_aggregation_labels,
aggregation_loss_weight,
):
"""
Calculates the aggregation loss per example.
Args:
logits_aggregation (`torch.FloatTensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
aggregate_mask (`torch.FloatTensor` of shape `(batch_size, )`):
A mask set to 1 for examples that should use aggregation functions.
aggregation_labels (`torch.LongTensor` of shape `(batch_size, )`):
Aggregation function id for every example in the batch.
use_answer_as_supervision (`bool`, *optional*):
Whether to use the answer as the only supervision for aggregation examples.
num_aggregation_labels (`int`, *optional*, defaults to 0):
The number of aggregation operators to predict.
aggregation_loss_weight (`float`, *optional*, defaults to 1.0):
Importance weight for the aggregation loss.
Returns:
aggregation_loss (`torch.FloatTensor` of shape `(batch_size,)`): Aggregation loss per example.
"""
per_example_aggregation_loss = _calculate_aggregation_loss_known(
logits_aggregation, aggregate_mask, aggregation_labels, use_answer_as_supervision, num_aggregation_labels
)
if use_answer_as_supervision:
# Add aggregation loss for numeric answers that need aggregation.
per_example_aggregation_loss += _calculate_aggregation_loss_unknown(logits_aggregation, aggregate_mask)
return aggregation_loss_weight * per_example_aggregation_loss
def _calculate_expected_result(
dist_per_cell, numeric_values, numeric_values_scale, input_mask_float, logits_aggregation, config
):
"""
Calculates the expected result given cell and aggregation probabilities.
Args:
dist_per_cell (`torch.distributions.Bernoulli`):
Cell selection distribution for each cell.
numeric_values (`torch.FloatTensor` of shape `(batch_size, seq_length)`):
Numeric values of every token. Nan for tokens which are not numeric values.
numeric_values_scale (`torch.FloatTensor` of shape `(batch_size, seq_length)`):
Scale of the numeric values of every token.
input_mask_float (`torch.FloatTensor` of shape `(batch_size, seq_length)`):
Mask for the table, without question tokens and table headers.
logits_aggregation (`torch.FloatTensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
config ([`TapasConfig`]):
Model configuration class with all the hyperparameters of the model
Returns:
expected_result (`torch.FloatTensor` of shape `(batch_size,)`): The expected result per example.
"""
if config.use_gumbel_for_cells:
gumbel_dist = torch.distributions.RelaxedBernoulli(
# The token logits where already divided by the temperature and used for
# computing cell selection errors so we need to multiply it again here
temperature=config.temperature,
logits=dist_per_cell.logits * config.temperature,
)
scaled_probability_per_cell = gumbel_dist.sample()
else:
scaled_probability_per_cell = dist_per_cell.probs
# <float32>[batch_size, seq_length]
scaled_probability_per_cell = (scaled_probability_per_cell / numeric_values_scale) * input_mask_float
count_result = torch.sum(scaled_probability_per_cell, dim=1)
numeric_values_masked = torch.where(
torch.isnan(numeric_values), torch.zeros_like(numeric_values), numeric_values
) # Mask non-numeric table values to zero.
sum_result = torch.sum(scaled_probability_per_cell * numeric_values_masked, dim=1)
avg_approximation = config.average_approximation_function
if avg_approximation == AverageApproximationFunction.RATIO:
average_result = sum_result / (count_result + EPSILON_ZERO_DIVISION)
elif avg_approximation == AverageApproximationFunction.FIRST_ORDER:
# The sum of all probabilities except that correspond to other cells
# Ex here stands for expectation, more explicitly the expectation of the sum of N-1 Bernoulli random variables plus
# the constant 1, which is computed as adding all N expected values and subtracting the extra one. It corresponds to X_c
# in Appendix D of the original TAPAS paper which is trying to approximate the average of a random set.
ex = torch.sum(scaled_probability_per_cell, dim=1, keepdim=True) - scaled_probability_per_cell + 1
average_result = torch.sum(numeric_values_masked * scaled_probability_per_cell / ex, dim=1)
elif avg_approximation == AverageApproximationFunction.SECOND_ORDER:
# The sum of all probabilities except that correspond to other cells
ex = torch.sum(scaled_probability_per_cell, dim=1, keepdim=True) - scaled_probability_per_cell + 1
pointwise_var = scaled_probability_per_cell * (1 - scaled_probability_per_cell)
var = torch.sum(pointwise_var, dim=1, keepdim=True) - pointwise_var
multiplier = (var / torch.square(ex) + 1) / ex
average_result = torch.sum(numeric_values_masked * scaled_probability_per_cell * multiplier, dim=1)
else:
raise ValueError(f"Invalid average_approximation_function: {config.average_approximation_function}")
if config.use_gumbel_for_aggregation:
gumbel_dist = torch.distributions.RelaxedOneHotCategorical(
config.aggregation_temperature, logits=logits_aggregation[:, 1:]
)
# <float32>[batch_size, num_aggregation_labels - 1]
aggregation_op_only_probs = gumbel_dist.sample()
else:
# <float32>[batch_size, num_aggregation_labels - 1]
aggregation_op_only_probs = nn.functional.softmax(
logits_aggregation[:, 1:] / config.aggregation_temperature, dim=-1
)
all_results = torch.cat(
[
torch.unsqueeze(sum_result, dim=1),
torch.unsqueeze(average_result, dim=1),
torch.unsqueeze(count_result, dim=1),
],
dim=1,
)
expected_result = torch.sum(all_results * aggregation_op_only_probs, dim=1)
return expected_result
# PyTorch does not currently support Huber loss with custom delta so we define it ourself
def huber_loss(input, target, delta: float = 1.0):
errors = torch.abs(input - target) # shape (batch_size,)
return torch.where(errors < delta, 0.5 * errors**2, errors * delta - (0.5 * delta**2))
def _calculate_regression_loss(
answer,
aggregate_mask,
dist_per_cell,
numeric_values,
numeric_values_scale,
input_mask_float,
logits_aggregation,
config,
):
"""
Calculates the regression loss per example.
Args:
answer (`torch.FloatTensor` of shape `(batch_size,)`):
Answer for every example in the batch. Nan if there is no scalar answer.
aggregate_mask (`torch.FloatTensor` of shape `(batch_size,)`):
A mask set to 1 for examples that should use aggregation functions.
dist_per_cell (`torch.distributions.Bernoulli`):
Cell selection distribution for each cell.
numeric_values (`torch.FloatTensor` of shape `(batch_size, seq_length)`):
Numeric values of every token. Nan for tokens which are not numeric values.
numeric_values_scale (`torch.FloatTensor` of shape `(batch_size, seq_length)`):
Scale of the numeric values of every token.
input_mask_float (`torch.FloatTensor` of shape `(batch_size, seq_length)`):
Mask for the table, without question tokens and table headers.
logits_aggregation (`torch.FloatTensor` of shape `(batch_size, num_aggregation_labels)`):
Logits per aggregation operation.
config ([`TapasConfig`]):
Model configuration class with all the parameters of the model
Returns:
per_example_answer_loss_scaled (`torch.FloatTensor` of shape `(batch_size,)`): Scales answer loss for each
example in the batch. large_answer_loss_mask (`torch.FloatTensor` of shape `(batch_size,)`): A mask which is 1
for examples for which their answer loss is larger than the answer_loss_cutoff.
"""
# float32 (batch_size,)
expected_result = _calculate_expected_result(
dist_per_cell, numeric_values, numeric_values_scale, input_mask_float, logits_aggregation, config
)
# float32 (batch_size,)
answer_masked = torch.where(torch.isnan(answer), torch.zeros_like(answer), answer)
if config.use_normalized_answer_loss:
normalizer = (torch.max(torch.abs(expected_result), torch.abs(answer_masked)) + EPSILON_ZERO_DIVISION).detach()
normalized_answer_masked = answer_masked / normalizer
normalized_expected_result = expected_result / normalizer
per_example_answer_loss = huber_loss(
normalized_expected_result * aggregate_mask, normalized_answer_masked * aggregate_mask
)
else:
per_example_answer_loss = huber_loss(
expected_result * aggregate_mask, answer_masked * aggregate_mask, delta=config.huber_loss_delta
)
if config.answer_loss_cutoff is None:
large_answer_loss_mask = torch.ones_like(per_example_answer_loss, dtype=torch.float32)
else:
large_answer_loss_mask = torch.where(
per_example_answer_loss > config.answer_loss_cutoff,
torch.zeros_like(per_example_answer_loss, dtype=torch.float32),
torch.ones_like(per_example_answer_loss, dtype=torch.float32),
)
per_example_answer_loss_scaled = config.answer_loss_importance * (per_example_answer_loss * aggregate_mask)
return per_example_answer_loss_scaled, large_answer_loss_mask
|
27182812/ChatGLM-LLaMA-chinese-insturct | 1,053 | src/transformers/models/bert_japanese/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import _LazyModule
_import_structure = {"tokenization_bert_japanese": ["BertJapaneseTokenizer", "CharacterTokenizer", "MecabTokenizer"]}
if TYPE_CHECKING:
from .tokenization_bert_japanese import BertJapaneseTokenizer, CharacterTokenizer, MecabTokenizer
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 39,623 | src/transformers/models/bert_japanese/tokenization_bert_japanese.py | # coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes."""
import collections
import copy
import os
import unicodedata
from typing import Any, Dict, List, Optional, Tuple
from ...tokenization_utils import PreTrainedTokenizer, _is_control, _is_punctuation, _is_whitespace
from ...utils import is_sentencepiece_available, logging
if is_sentencepiece_available():
import sentencepiece as spm
else:
spm = None
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt", "spm_file": "spiece.model"}
SPIECE_UNDERLINE = "▁"
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"cl-tohoku/bert-base-japanese": "https://huggingface.co/cl-tohoku/bert-base-japanese/resolve/main/vocab.txt",
"cl-tohoku/bert-base-japanese-whole-word-masking": (
"https://huggingface.co/cl-tohoku/bert-base-japanese-whole-word-masking/resolve/main/vocab.txt"
),
"cl-tohoku/bert-base-japanese-char": (
"https://huggingface.co/cl-tohoku/bert-base-japanese-char/resolve/main/vocab.txt"
),
"cl-tohoku/bert-base-japanese-char-whole-word-masking": (
"https://huggingface.co/cl-tohoku/bert-base-japanese-char-whole-word-masking/resolve/main/vocab.txt"
),
}
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"cl-tohoku/bert-base-japanese": 512,
"cl-tohoku/bert-base-japanese-whole-word-masking": 512,
"cl-tohoku/bert-base-japanese-char": 512,
"cl-tohoku/bert-base-japanese-char-whole-word-masking": 512,
}
PRETRAINED_INIT_CONFIGURATION = {
"cl-tohoku/bert-base-japanese": {
"do_lower_case": False,
"word_tokenizer_type": "mecab",
"subword_tokenizer_type": "wordpiece",
},
"cl-tohoku/bert-base-japanese-whole-word-masking": {
"do_lower_case": False,
"word_tokenizer_type": "mecab",
"subword_tokenizer_type": "wordpiece",
},
"cl-tohoku/bert-base-japanese-char": {
"do_lower_case": False,
"word_tokenizer_type": "mecab",
"subword_tokenizer_type": "character",
},
"cl-tohoku/bert-base-japanese-char-whole-word-masking": {
"do_lower_case": False,
"word_tokenizer_type": "mecab",
"subword_tokenizer_type": "character",
},
}
# Copied from transformers.models.bert.tokenization_bert.load_vocab
def load_vocab(vocab_file):
"""Loads a vocabulary file into a dictionary."""
vocab = collections.OrderedDict()
with open(vocab_file, "r", encoding="utf-8") as reader:
tokens = reader.readlines()
for index, token in enumerate(tokens):
token = token.rstrip("\n")
vocab[token] = index
return vocab
# Copied from transformers.models.bert.tokenization_bert.whitespace_tokenize
def whitespace_tokenize(text):
"""Runs basic whitespace cleaning and splitting on a piece of text."""
text = text.strip()
if not text:
return []
tokens = text.split()
return tokens
class BertJapaneseTokenizer(PreTrainedTokenizer):
r"""
Construct a BERT tokenizer for Japanese text.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer
to: this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to a one-wordpiece-per-line vocabulary file.
spm_file (`str`, *optional*):
Path to [SentencePiece](https://github.com/google/sentencepiece) file (generally has a .spm or .model
extension) that contains the vocabulary.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether to lower case the input. Only has an effect when do_basic_tokenize=True.
do_word_tokenize (`bool`, *optional*, defaults to `True`):
Whether to do word tokenization.
do_subword_tokenize (`bool`, *optional*, defaults to `True`):
Whether to do subword tokenization.
word_tokenizer_type (`str`, *optional*, defaults to `"basic"`):
Type of word tokenizer. Choose from ["basic", "mecab", "sudachi", "jumanpp"].
subword_tokenizer_type (`str`, *optional*, defaults to `"wordpiece"`):
Type of subword tokenizer. Choose from ["wordpiece", "character", "sentencepiece",].
mecab_kwargs (`dict`, *optional*):
Dictionary passed to the `MecabTokenizer` constructor.
sudachi_kwargs (`dict`, *optional*):
Dictionary passed to the `SudachiTokenizer` constructor.
jumanpp_kwargs (`dict`, *optional*):
Dictionary passed to the `JumanppTokenizer` constructor.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
def __init__(
self,
vocab_file,
spm_file=None,
do_lower_case=False,
do_word_tokenize=True,
do_subword_tokenize=True,
word_tokenizer_type="basic",
subword_tokenizer_type="wordpiece",
never_split=None,
unk_token="[UNK]",
sep_token="[SEP]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
mecab_kwargs=None,
sudachi_kwargs=None,
jumanpp_kwargs=None,
**kwargs,
):
super().__init__(
spm_file=spm_file,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
do_lower_case=do_lower_case,
do_word_tokenize=do_word_tokenize,
do_subword_tokenize=do_subword_tokenize,
word_tokenizer_type=word_tokenizer_type,
subword_tokenizer_type=subword_tokenizer_type,
never_split=never_split,
mecab_kwargs=mecab_kwargs,
sudachi_kwargs=sudachi_kwargs,
jumanpp_kwargs=jumanpp_kwargs,
**kwargs,
)
if subword_tokenizer_type == "sentencepiece":
if not os.path.isfile(spm_file):
raise ValueError(
f"Can't find a vocabulary file at path '{spm_file}'. To load the vocabulary from a Google"
" pretrained model use `tokenizer = AutoTokenizer.from_pretrained(PRETRAINED_MODEL_NAME)`"
)
self.spm_file = spm_file
else:
if not os.path.isfile(vocab_file):
raise ValueError(
f"Can't find a vocabulary file at path '{vocab_file}'. To load the vocabulary from a Google"
" pretrained model use `tokenizer = AutoTokenizer.from_pretrained(PRETRAINED_MODEL_NAME)`"
)
self.vocab = load_vocab(vocab_file)
self.ids_to_tokens = collections.OrderedDict([(ids, tok) for tok, ids in self.vocab.items()])
self.do_word_tokenize = do_word_tokenize
self.word_tokenizer_type = word_tokenizer_type
self.lower_case = do_lower_case
self.never_split = never_split
self.mecab_kwargs = copy.deepcopy(mecab_kwargs)
self.sudachi_kwargs = copy.deepcopy(sudachi_kwargs)
self.jumanpp_kwargs = copy.deepcopy(jumanpp_kwargs)
if do_word_tokenize:
if word_tokenizer_type == "basic":
self.word_tokenizer = BasicTokenizer(
do_lower_case=do_lower_case, never_split=never_split, tokenize_chinese_chars=False
)
elif word_tokenizer_type == "mecab":
self.word_tokenizer = MecabTokenizer(
do_lower_case=do_lower_case, never_split=never_split, **(mecab_kwargs or {})
)
elif word_tokenizer_type == "sudachi":
self.word_tokenizer = SudachiTokenizer(
do_lower_case=do_lower_case, never_split=never_split, **(sudachi_kwargs or {})
)
elif word_tokenizer_type == "jumanpp":
self.word_tokenizer = JumanppTokenizer(
do_lower_case=do_lower_case, never_split=never_split, **(jumanpp_kwargs or {})
)
else:
raise ValueError(f"Invalid word_tokenizer_type '{word_tokenizer_type}' is specified.")
self.do_subword_tokenize = do_subword_tokenize
self.subword_tokenizer_type = subword_tokenizer_type
if do_subword_tokenize:
if subword_tokenizer_type == "wordpiece":
self.subword_tokenizer = WordpieceTokenizer(vocab=self.vocab, unk_token=self.unk_token)
elif subword_tokenizer_type == "character":
self.subword_tokenizer = CharacterTokenizer(vocab=self.vocab, unk_token=self.unk_token)
elif subword_tokenizer_type == "sentencepiece":
self.subword_tokenizer = SentencepieceTokenizer(vocab=self.spm_file, unk_token=self.unk_token)
else:
raise ValueError(f"Invalid subword_tokenizer_type '{subword_tokenizer_type}' is specified.")
@property
def do_lower_case(self):
return self.lower_case
def __getstate__(self):
state = dict(self.__dict__)
if self.word_tokenizer_type in ["mecab", "sudachi", "jumanpp"]:
del state["word_tokenizer"]
return state
def __setstate__(self, state):
self.__dict__ = state
if self.word_tokenizer_type == "mecab":
self.word_tokenizer = MecabTokenizer(
do_lower_case=self.do_lower_case, never_split=self.never_split, **(self.mecab_kwargs or {})
)
elif self.word_tokenizer_type == "sudachi":
self.word_tokenizer = SudachiTokenizer(
do_lower_case=self.do_lower_case, never_split=self.never_split, **(self.sudachi_kwargs or {})
)
elif self.word_tokenizer_type == "jumanpp":
self.word_tokenizer = JumanppTokenizer(
do_lower_case=self.do_lower_case, never_split=self.never_split, **(self.jumanpp_kwargs or {})
)
def _tokenize(self, text):
if self.do_word_tokenize:
tokens = self.word_tokenizer.tokenize(text, never_split=self.all_special_tokens)
else:
tokens = [text]
if self.do_subword_tokenize:
split_tokens = [sub_token for token in tokens for sub_token in self.subword_tokenizer.tokenize(token)]
else:
split_tokens = tokens
return split_tokens
@property
def vocab_size(self):
if self.subword_tokenizer_type == "sentencepiece":
return len(self.subword_tokenizer.sp_model)
return len(self.vocab)
def get_vocab(self):
if self.subword_tokenizer_type == "sentencepiece":
vocab = {self.convert_ids_to_tokens(i): i for i in range(self.vocab_size)}
vocab.update(self.added_tokens_encoder)
return vocab
return dict(self.vocab, **self.added_tokens_encoder)
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
if self.subword_tokenizer_type == "sentencepiece":
return self.subword_tokenizer.sp_model.PieceToId(token)
return self.vocab.get(token, self.vocab.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
if self.subword_tokenizer_type == "sentencepiece":
return self.subword_tokenizer.sp_model.IdToPiece(index)
return self.ids_to_tokens.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
if self.subword_tokenizer_type == "sentencepiece":
return self.subword_tokenizer.sp_model.decode(tokens)
out_string = " ".join(tokens).replace(" ##", "").strip()
return out_string
# Copied from transformers.models.bert.tokenization_bert.BertTokenizer.build_inputs_with_special_tokens
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A BERT sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
# Copied from transformers.models.bert.tokenization_bert.BertTokenizer.get_special_tokens_mask
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is not None:
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1]
# Copied from transformers.models.bert.tokenization_bert.BertTokenizer.create_token_type_ids_from_sequences
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A BERT sequence
pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if os.path.isdir(save_directory):
if self.subword_tokenizer_type == "sentencepiece":
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["spm_file"]
)
else:
vocab_file = os.path.join(
save_directory,
(filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"],
)
else:
vocab_file = (filename_prefix + "-" if filename_prefix else "") + save_directory
if self.subword_tokenizer_type == "sentencepiece":
with open(vocab_file, "wb") as writer:
content_spiece_model = self.subword_tokenizer.sp_model.serialized_model_proto()
writer.write(content_spiece_model)
else:
with open(vocab_file, "w", encoding="utf-8") as writer:
index = 0
for token, token_index in sorted(self.vocab.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {vocab_file}: vocabulary indices are not consecutive."
" Please check that the vocabulary is not corrupted!"
)
index = token_index
writer.write(token + "\n")
index += 1
return (vocab_file,)
class MecabTokenizer:
"""Runs basic tokenization with MeCab morphological parser."""
def __init__(
self,
do_lower_case=False,
never_split=None,
normalize_text=True,
mecab_dic: Optional[str] = "ipadic",
mecab_option: Optional[str] = None,
):
"""
Constructs a MecabTokenizer.
Args:
**do_lower_case**: (*optional*) boolean (default True)
Whether to lowercase the input.
**never_split**: (*optional*) list of str
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of tokens not to split.
**normalize_text**: (*optional*) boolean (default True)
Whether to apply unicode normalization to text before tokenization.
**mecab_dic**: (*optional*) string (default "ipadic")
Name of dictionary to be used for MeCab initialization. If you are using a system-installed dictionary,
set this option to `None` and modify *mecab_option*.
**mecab_option**: (*optional*) string
String passed to MeCab constructor.
"""
self.do_lower_case = do_lower_case
self.never_split = never_split if never_split is not None else []
self.normalize_text = normalize_text
try:
import fugashi
except ModuleNotFoundError as error:
raise error.__class__(
"You need to install fugashi to use MecabTokenizer. "
"See https://pypi.org/project/fugashi/ for installation."
)
mecab_option = mecab_option or ""
if mecab_dic is not None:
if mecab_dic == "ipadic":
try:
import ipadic
except ModuleNotFoundError as error:
raise error.__class__(
"The ipadic dictionary is not installed. "
"See https://github.com/polm/ipadic-py for installation."
)
dic_dir = ipadic.DICDIR
elif mecab_dic == "unidic_lite":
try:
import unidic_lite
except ModuleNotFoundError as error:
raise error.__class__(
"The unidic_lite dictionary is not installed. "
"See https://github.com/polm/unidic-lite for installation."
)
dic_dir = unidic_lite.DICDIR
elif mecab_dic == "unidic":
try:
import unidic
except ModuleNotFoundError as error:
raise error.__class__(
"The unidic dictionary is not installed. "
"See https://github.com/polm/unidic-py for installation."
)
dic_dir = unidic.DICDIR
if not os.path.isdir(dic_dir):
raise RuntimeError(
"The unidic dictionary itself is not found. "
"See https://github.com/polm/unidic-py for installation."
)
else:
raise ValueError("Invalid mecab_dic is specified.")
mecabrc = os.path.join(dic_dir, "mecabrc")
mecab_option = f'-d "{dic_dir}" -r "{mecabrc}" ' + mecab_option
self.mecab = fugashi.GenericTagger(mecab_option)
def tokenize(self, text, never_split=None, **kwargs):
"""Tokenizes a piece of text."""
if self.normalize_text:
text = unicodedata.normalize("NFKC", text)
never_split = self.never_split + (never_split if never_split is not None else [])
tokens = []
for word in self.mecab(text):
token = word.surface
if self.do_lower_case and token not in never_split:
token = token.lower()
tokens.append(token)
return tokens
class SudachiTokenizer:
"""Runs basic tokenization with Sudachi morphological parser."""
def __init__(
self,
do_lower_case=False,
never_split=None,
normalize_text=True,
trim_whitespace=False,
sudachi_split_mode="A",
sudachi_config_path=None,
sudachi_resource_dir=None,
sudachi_dict_type="core",
):
"""
Constructs a SudachiTokenizer.
Args:
**do_lower_case**: (*optional*) boolean (default True)
Whether to lowercase the input.
**never_split**: (*optional*) list of str
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of tokens not to split.
**normalize_text**: (*optional*) boolean (default True)
Whether to apply unicode normalization to text before tokenization.
**trim_whitespace**: (*optional*) boolean (default False)
Whether to trim all whitespace, tab, newline from tokens.
**sudachi_split_mode**: (*optional*) string
Split mode of sudachi, choose from "A", "B", "C".
**sudachi_config_path**: (*optional*) string
**sudachi_resource_dir**: (*optional*) string
**sudachi_dict_type**: (*optional*) string
dict type of sudachi, choose from "small", "core", "full".
"""
self.do_lower_case = do_lower_case
self.never_split = never_split if never_split is not None else []
self.normalize_text = normalize_text
self.trim_whitespace = trim_whitespace
try:
from sudachipy import dictionary, tokenizer
except ImportError:
raise ImportError(
"You need to install sudachipy to use SudachiTokenizer. "
"See https://github.com/WorksApplications/SudachiPy for installation."
)
if sudachi_split_mode == "A":
self.split_mode = tokenizer.Tokenizer.SplitMode.A
elif sudachi_split_mode == "B":
self.split_mode = tokenizer.Tokenizer.SplitMode.B
elif sudachi_split_mode == "C":
self.split_mode = tokenizer.Tokenizer.SplitMode.C
else:
raise ValueError("Invalid sudachi_split_mode is specified.")
self.sudachi = dictionary.Dictionary(
config_path=sudachi_config_path, resource_dir=sudachi_resource_dir, dict=sudachi_dict_type
).create(self.split_mode)
def tokenize(self, text, never_split=None, **kwargs):
"""Tokenizes a piece of text."""
if self.normalize_text:
text = unicodedata.normalize("NFKC", text)
never_split = self.never_split + (never_split if never_split is not None else [])
tokens = []
for word in self.sudachi.tokenize(text):
token = word.surface()
if self.do_lower_case and token not in never_split:
token = token.lower()
if self.trim_whitespace:
if token.strip() == "":
continue
else:
token = token.strip()
tokens.append(token)
return tokens
class JumanppTokenizer:
"""Runs basic tokenization with jumanpp morphological parser."""
def __init__(
self,
do_lower_case=False,
never_split=None,
normalize_text=True,
trim_whitespace=False,
):
"""
Constructs a JumanppTokenizer.
Args:
**do_lower_case**: (*optional*) boolean (default True)
Whether to lowercase the input.
**never_split**: (*optional*) list of str
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of tokens not to split.
**normalize_text**: (*optional*) boolean (default True)
Whether to apply unicode normalization to text before tokenization.
**trim_whitespace**: (*optional*) boolean (default False)
Whether to trim all whitespace, tab, newline from tokens.
"""
self.do_lower_case = do_lower_case
self.never_split = never_split if never_split is not None else []
self.normalize_text = normalize_text
self.trim_whitespace = trim_whitespace
try:
import rhoknp
except ImportError:
raise ImportError(
"You need to install rhoknp to use JumanppTokenizer. "
"See https://github.com/ku-nlp/rhoknp for installation."
)
self.juman = rhoknp.Jumanpp()
def tokenize(self, text, never_split=None, **kwargs):
"""Tokenizes a piece of text."""
if self.normalize_text:
text = unicodedata.normalize("NFKC", text)
text = text.strip()
never_split = self.never_split + (never_split if never_split is not None else [])
tokens = []
for mrph in self.juman.apply_to_sentence(text).morphemes:
token = mrph.text
if self.do_lower_case and token not in never_split:
token = token.lower()
if self.trim_whitespace:
if token.strip() == "":
continue
else:
token = token.strip()
tokens.append(token)
return tokens
class CharacterTokenizer:
"""Runs Character tokenization."""
def __init__(self, vocab, unk_token, normalize_text=True):
"""
Constructs a CharacterTokenizer.
Args:
**vocab**:
Vocabulary object.
**unk_token**: str
A special symbol for out-of-vocabulary token.
**normalize_text**: (`optional`) boolean (default True)
Whether to apply unicode normalization to text before tokenization.
"""
self.vocab = vocab
self.unk_token = unk_token
self.normalize_text = normalize_text
def tokenize(self, text):
"""
Tokenizes a piece of text into characters.
For example, `input = "apple""` wil return as output `["a", "p", "p", "l", "e"]`.
Args:
text: A single token or whitespace separated tokens.
This should have already been passed through *BasicTokenizer*.
Returns:
A list of characters.
"""
if self.normalize_text:
text = unicodedata.normalize("NFKC", text)
output_tokens = []
for char in text:
if char not in self.vocab:
output_tokens.append(self.unk_token)
continue
output_tokens.append(char)
return output_tokens
# Copied from transformers.models.bert.tokenization_bert.BasicTokenizer
class BasicTokenizer(object):
"""
Constructs a BasicTokenizer that will run basic tokenization (punctuation splitting, lower casing, etc.).
Args:
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
"""
def __init__(self, do_lower_case=True, never_split=None, tokenize_chinese_chars=True, strip_accents=None):
if never_split is None:
never_split = []
self.do_lower_case = do_lower_case
self.never_split = set(never_split)
self.tokenize_chinese_chars = tokenize_chinese_chars
self.strip_accents = strip_accents
def tokenize(self, text, never_split=None):
"""
Basic Tokenization of a piece of text. Split on "white spaces" only, for sub-word tokenization, see
WordPieceTokenizer.
Args:
never_split (`List[str]`, *optional*)
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of token not to split.
"""
# union() returns a new set by concatenating the two sets.
never_split = self.never_split.union(set(never_split)) if never_split else self.never_split
text = self._clean_text(text)
# This was added on November 1st, 2018 for the multilingual and Chinese
# models. This is also applied to the English models now, but it doesn't
# matter since the English models were not trained on any Chinese data
# and generally don't have any Chinese data in them (there are Chinese
# characters in the vocabulary because Wikipedia does have some Chinese
# words in the English Wikipedia.).
if self.tokenize_chinese_chars:
text = self._tokenize_chinese_chars(text)
orig_tokens = whitespace_tokenize(text)
split_tokens = []
for token in orig_tokens:
if token not in never_split:
if self.do_lower_case:
token = token.lower()
if self.strip_accents is not False:
token = self._run_strip_accents(token)
elif self.strip_accents:
token = self._run_strip_accents(token)
split_tokens.extend(self._run_split_on_punc(token, never_split))
output_tokens = whitespace_tokenize(" ".join(split_tokens))
return output_tokens
def _run_strip_accents(self, text):
"""Strips accents from a piece of text."""
text = unicodedata.normalize("NFD", text)
output = []
for char in text:
cat = unicodedata.category(char)
if cat == "Mn":
continue
output.append(char)
return "".join(output)
def _run_split_on_punc(self, text, never_split=None):
"""Splits punctuation on a piece of text."""
if never_split is not None and text in never_split:
return [text]
chars = list(text)
i = 0
start_new_word = True
output = []
while i < len(chars):
char = chars[i]
if _is_punctuation(char):
output.append([char])
start_new_word = True
else:
if start_new_word:
output.append([])
start_new_word = False
output[-1].append(char)
i += 1
return ["".join(x) for x in output]
def _tokenize_chinese_chars(self, text):
"""Adds whitespace around any CJK character."""
output = []
for char in text:
cp = ord(char)
if self._is_chinese_char(cp):
output.append(" ")
output.append(char)
output.append(" ")
else:
output.append(char)
return "".join(output)
def _is_chinese_char(self, cp):
"""Checks whether CP is the codepoint of a CJK character."""
# This defines a "chinese character" as anything in the CJK Unicode block:
# https://en.wikipedia.org/wiki/CJK_Unified_Ideographs_(Unicode_block)
#
# Note that the CJK Unicode block is NOT all Japanese and Korean characters,
# despite its name. The modern Korean Hangul alphabet is a different block,
# as is Japanese Hiragana and Katakana. Those alphabets are used to write
# space-separated words, so they are not treated specially and handled
# like the all of the other languages.
if (
(cp >= 0x4E00 and cp <= 0x9FFF)
or (cp >= 0x3400 and cp <= 0x4DBF) #
or (cp >= 0x20000 and cp <= 0x2A6DF) #
or (cp >= 0x2A700 and cp <= 0x2B73F) #
or (cp >= 0x2B740 and cp <= 0x2B81F) #
or (cp >= 0x2B820 and cp <= 0x2CEAF) #
or (cp >= 0xF900 and cp <= 0xFAFF)
or (cp >= 0x2F800 and cp <= 0x2FA1F) #
): #
return True
return False
def _clean_text(self, text):
"""Performs invalid character removal and whitespace cleanup on text."""
output = []
for char in text:
cp = ord(char)
if cp == 0 or cp == 0xFFFD or _is_control(char):
continue
if _is_whitespace(char):
output.append(" ")
else:
output.append(char)
return "".join(output)
# Copied from transformers.models.bert.tokenization_bert.WordpieceTokenizer
class WordpieceTokenizer(object):
"""Runs WordPiece tokenization."""
def __init__(self, vocab, unk_token, max_input_chars_per_word=100):
self.vocab = vocab
self.unk_token = unk_token
self.max_input_chars_per_word = max_input_chars_per_word
def tokenize(self, text):
"""
Tokenizes a piece of text into its word pieces. This uses a greedy longest-match-first algorithm to perform
tokenization using the given vocabulary.
For example, `input = "unaffable"` wil return as output `["un", "##aff", "##able"]`.
Args:
text: A single token or whitespace separated tokens. This should have
already been passed through *BasicTokenizer*.
Returns:
A list of wordpiece tokens.
"""
output_tokens = []
for token in whitespace_tokenize(text):
chars = list(token)
if len(chars) > self.max_input_chars_per_word:
output_tokens.append(self.unk_token)
continue
is_bad = False
start = 0
sub_tokens = []
while start < len(chars):
end = len(chars)
cur_substr = None
while start < end:
substr = "".join(chars[start:end])
if start > 0:
substr = "##" + substr
if substr in self.vocab:
cur_substr = substr
break
end -= 1
if cur_substr is None:
is_bad = True
break
sub_tokens.append(cur_substr)
start = end
if is_bad:
output_tokens.append(self.unk_token)
else:
output_tokens.extend(sub_tokens)
return output_tokens
class SentencepieceTokenizer(object):
"""
Runs sentencepiece tokenization. Based on transformers.models.albert.tokenization_albert.AlbertTokenizer.
"""
def __init__(
self,
vocab,
unk_token,
do_lower_case=False,
remove_space=True,
keep_accents=True,
sp_model_kwargs: Optional[Dict[str, Any]] = None,
):
self.vocab = vocab
self.unk_token = unk_token
self.do_lower_case = do_lower_case
self.remove_space = remove_space
self.keep_accents = keep_accents
self.sp_model_kwargs = {} if sp_model_kwargs is None else sp_model_kwargs
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(self.vocab)
def preprocess_text(self, inputs):
if self.remove_space:
outputs = " ".join(inputs.strip().split())
else:
outputs = inputs
outputs = outputs.replace("``", '"').replace("''", '"')
if not self.keep_accents:
outputs = unicodedata.normalize("NFKD", outputs)
outputs = "".join([c for c in outputs if not unicodedata.combining(c)])
if self.do_lower_case:
outputs = outputs.lower()
return outputs
def tokenize(self, text):
"""
Tokenizes text by sentencepiece. Based on [SentencePiece](https://github.com/google/sentencepiece).
Tokenization needs the given vocabulary.
Args:
text: A string needs to be tokenized.
Returns:
A list of sentencepiece tokens.
"""
text = self.preprocess_text(text)
pieces = self.sp_model.encode(text, out_type=str)
new_pieces = []
for piece in pieces:
if len(piece) > 1 and piece[-1] == str(",") and piece[-2].isdigit():
cur_pieces = self.sp_model.EncodeAsPieces(piece[:-1].replace(SPIECE_UNDERLINE, ""))
if piece[0] != SPIECE_UNDERLINE and cur_pieces[0][0] == SPIECE_UNDERLINE:
if len(cur_pieces[0]) == 1:
cur_pieces = cur_pieces[1:]
else:
cur_pieces[0] = cur_pieces[0][1:]
cur_pieces.append(piece[-1])
new_pieces.extend(cur_pieces)
else:
new_pieces.append(piece)
return new_pieces
|
27182812/ChatGLM-LLaMA-chinese-insturct | 14,045 | src/transformers/models/bort/convert_bort_original_gluonnlp_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2020, The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert Bort checkpoint."""
import argparse
import os
import gluonnlp as nlp
import mxnet as mx
import numpy as np
import torch
from gluonnlp.base import get_home_dir
from gluonnlp.model.bert import BERTEncoder
from gluonnlp.model.utils import _load_vocab
from gluonnlp.vocab import Vocab
from packaging import version
from torch import nn
from transformers import BertConfig, BertForMaskedLM, BertModel, RobertaTokenizer
from transformers.models.bert.modeling_bert import (
BertIntermediate,
BertLayer,
BertOutput,
BertSelfAttention,
BertSelfOutput,
)
from transformers.utils import logging
if version.parse(nlp.__version__) != version.parse("0.8.3"):
raise Exception("requires gluonnlp == 0.8.3")
if version.parse(mx.__version__) != version.parse("1.5.0"):
raise Exception("requires mxnet == 1.5.0")
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
SAMPLE_TEXT = "The Nymphenburg Palace is a beautiful palace in Munich!"
def convert_bort_checkpoint_to_pytorch(bort_checkpoint_path: str, pytorch_dump_folder_path: str):
"""
Convert the original Bort checkpoint (based on MXNET and Gluonnlp) to our BERT structure-
"""
# Original Bort configuration
bort_4_8_768_1024_hparams = {
"attention_cell": "multi_head",
"num_layers": 4,
"units": 1024,
"hidden_size": 768,
"max_length": 512,
"num_heads": 8,
"scaled": True,
"dropout": 0.1,
"use_residual": True,
"embed_size": 1024,
"embed_dropout": 0.1,
"word_embed": None,
"layer_norm_eps": 1e-5,
"token_type_vocab_size": 2,
}
predefined_args = bort_4_8_768_1024_hparams
# Let's construct the original Bort model here
# Taken from official BERT implementation, see:
# https://github.com/alexa/bort/blob/master/bort/bort.py
encoder = BERTEncoder(
attention_cell=predefined_args["attention_cell"],
num_layers=predefined_args["num_layers"],
units=predefined_args["units"],
hidden_size=predefined_args["hidden_size"],
max_length=predefined_args["max_length"],
num_heads=predefined_args["num_heads"],
scaled=predefined_args["scaled"],
dropout=predefined_args["dropout"],
output_attention=False,
output_all_encodings=False,
use_residual=predefined_args["use_residual"],
activation=predefined_args.get("activation", "gelu"),
layer_norm_eps=predefined_args.get("layer_norm_eps", None),
)
# Vocab information needs to be fetched first
# It's the same as RoBERTa, so RobertaTokenizer can be used later
vocab_name = "openwebtext_ccnews_stories_books_cased"
# Specify download folder to Gluonnlp's vocab
gluon_cache_dir = os.path.join(get_home_dir(), "models")
bort_vocab = _load_vocab(vocab_name, None, gluon_cache_dir, cls=Vocab)
original_bort = nlp.model.BERTModel(
encoder,
len(bort_vocab),
units=predefined_args["units"],
embed_size=predefined_args["embed_size"],
embed_dropout=predefined_args["embed_dropout"],
word_embed=predefined_args["word_embed"],
use_pooler=False,
use_token_type_embed=False,
token_type_vocab_size=predefined_args["token_type_vocab_size"],
use_classifier=False,
use_decoder=False,
)
original_bort.load_parameters(bort_checkpoint_path, cast_dtype=True, ignore_extra=True)
params = original_bort._collect_params_with_prefix()
# Build our config 🤗
hf_bort_config_json = {
"architectures": ["BertForMaskedLM"],
"attention_probs_dropout_prob": predefined_args["dropout"],
"hidden_act": "gelu",
"hidden_dropout_prob": predefined_args["dropout"],
"hidden_size": predefined_args["embed_size"],
"initializer_range": 0.02,
"intermediate_size": predefined_args["hidden_size"],
"layer_norm_eps": predefined_args["layer_norm_eps"],
"max_position_embeddings": predefined_args["max_length"],
"model_type": "bort",
"num_attention_heads": predefined_args["num_heads"],
"num_hidden_layers": predefined_args["num_layers"],
"pad_token_id": 1, # 2 = BERT, 1 = RoBERTa
"type_vocab_size": 1, # 2 = BERT, 1 = RoBERTa
"vocab_size": len(bort_vocab),
}
hf_bort_config = BertConfig.from_dict(hf_bort_config_json)
hf_bort_model = BertForMaskedLM(hf_bort_config)
hf_bort_model.eval()
# Parameter mapping table (Gluonnlp to Transformers)
# * denotes layer index
#
# | Gluon Parameter | Transformers Parameter
# | -------------------------------------------------------------- | ----------------------
# | `encoder.layer_norm.beta` | `bert.embeddings.LayerNorm.bias`
# | `encoder.layer_norm.gamma` | `bert.embeddings.LayerNorm.weight`
# | `encoder.position_weight` | `bert.embeddings.position_embeddings.weight`
# | `word_embed.0.weight` | `bert.embeddings.word_embeddings.weight`
# | `encoder.transformer_cells.*.attention_cell.proj_key.bias` | `bert.encoder.layer.*.attention.self.key.bias`
# | `encoder.transformer_cells.*.attention_cell.proj_key.weight` | `bert.encoder.layer.*.attention.self.key.weight`
# | `encoder.transformer_cells.*.attention_cell.proj_query.bias` | `bert.encoder.layer.*.attention.self.query.bias`
# | `encoder.transformer_cells.*.attention_cell.proj_query.weight` | `bert.encoder.layer.*.attention.self.query.weight`
# | `encoder.transformer_cells.*.attention_cell.proj_value.bias` | `bert.encoder.layer.*.attention.self.value.bias`
# | `encoder.transformer_cells.*.attention_cell.proj_value.weight` | `bert.encoder.layer.*.attention.self.value.weight`
# | `encoder.transformer_cells.*.ffn.ffn_2.bias` | `bert.encoder.layer.*.attention.output.dense.bias`
# | `encoder.transformer_cells.*.ffn.ffn_2.weight` | `bert.encoder.layer.*.attention.output.dense.weight`
# | `encoder.transformer_cells.*.layer_norm.beta` | `bert.encoder.layer.*.attention.output.LayerNorm.bias`
# | `encoder.transformer_cells.*.layer_norm.gamma` | `bert.encoder.layer.*.attention.output.LayerNorm.weight`
# | `encoder.transformer_cells.*.ffn.ffn_1.bias` | `bert.encoder.layer.*.intermediate.dense.bias`
# | `encoder.transformer_cells.*.ffn.ffn_1.weight` | `bert.encoder.layer.*.intermediate.dense.weight`
# | `encoder.transformer_cells.*.ffn.layer_norm.beta` | `bert.encoder.layer.*.output.LayerNorm.bias`
# | `encoder.transformer_cells.*.ffn.layer_norm.gamma` | `bert.encoder.layer.*.output.LayerNorm.weight`
# | `encoder.transformer_cells.*.proj.bias` | `bert.encoder.layer.*.output.dense.bias`
# | `encoder.transformer_cells.*.proj.weight` | `bert.encoder.layer.*.output.dense.weight`
# Helper function to convert MXNET Arrays to PyTorch
def to_torch(mx_array) -> nn.Parameter:
return nn.Parameter(torch.FloatTensor(mx_array.data().asnumpy()))
# Check param shapes and map new HF param back
def check_and_map_params(hf_param, gluon_param):
shape_hf = hf_param.shape
gluon_param = to_torch(params[gluon_param])
shape_gluon = gluon_param.shape
assert (
shape_hf == shape_gluon
), f"The gluon parameter {gluon_param} has shape {shape_gluon}, but expects shape {shape_hf} for Transformers"
return gluon_param
hf_bort_model.bert.embeddings.word_embeddings.weight = check_and_map_params(
hf_bort_model.bert.embeddings.word_embeddings.weight, "word_embed.0.weight"
)
hf_bort_model.bert.embeddings.position_embeddings.weight = check_and_map_params(
hf_bort_model.bert.embeddings.position_embeddings.weight, "encoder.position_weight"
)
hf_bort_model.bert.embeddings.LayerNorm.bias = check_and_map_params(
hf_bort_model.bert.embeddings.LayerNorm.bias, "encoder.layer_norm.beta"
)
hf_bort_model.bert.embeddings.LayerNorm.weight = check_and_map_params(
hf_bort_model.bert.embeddings.LayerNorm.weight, "encoder.layer_norm.gamma"
)
# Inspired by RoBERTa conversion script, we just zero them out (Bort does not use them)
hf_bort_model.bert.embeddings.token_type_embeddings.weight.data = torch.zeros_like(
hf_bort_model.bert.embeddings.token_type_embeddings.weight.data
)
for i in range(hf_bort_config.num_hidden_layers):
layer: BertLayer = hf_bort_model.bert.encoder.layer[i]
# self attention
self_attn: BertSelfAttention = layer.attention.self
self_attn.key.bias.data = check_and_map_params(
self_attn.key.bias.data, f"encoder.transformer_cells.{i}.attention_cell.proj_key.bias"
)
self_attn.key.weight.data = check_and_map_params(
self_attn.key.weight.data, f"encoder.transformer_cells.{i}.attention_cell.proj_key.weight"
)
self_attn.query.bias.data = check_and_map_params(
self_attn.query.bias.data, f"encoder.transformer_cells.{i}.attention_cell.proj_query.bias"
)
self_attn.query.weight.data = check_and_map_params(
self_attn.query.weight.data, f"encoder.transformer_cells.{i}.attention_cell.proj_query.weight"
)
self_attn.value.bias.data = check_and_map_params(
self_attn.value.bias.data, f"encoder.transformer_cells.{i}.attention_cell.proj_value.bias"
)
self_attn.value.weight.data = check_and_map_params(
self_attn.value.weight.data, f"encoder.transformer_cells.{i}.attention_cell.proj_value.weight"
)
# self attention output
self_output: BertSelfOutput = layer.attention.output
self_output.dense.bias = check_and_map_params(
self_output.dense.bias, f"encoder.transformer_cells.{i}.proj.bias"
)
self_output.dense.weight = check_and_map_params(
self_output.dense.weight, f"encoder.transformer_cells.{i}.proj.weight"
)
self_output.LayerNorm.bias = check_and_map_params(
self_output.LayerNorm.bias, f"encoder.transformer_cells.{i}.layer_norm.beta"
)
self_output.LayerNorm.weight = check_and_map_params(
self_output.LayerNorm.weight, f"encoder.transformer_cells.{i}.layer_norm.gamma"
)
# intermediate
intermediate: BertIntermediate = layer.intermediate
intermediate.dense.bias = check_and_map_params(
intermediate.dense.bias, f"encoder.transformer_cells.{i}.ffn.ffn_1.bias"
)
intermediate.dense.weight = check_and_map_params(
intermediate.dense.weight, f"encoder.transformer_cells.{i}.ffn.ffn_1.weight"
)
# output
bert_output: BertOutput = layer.output
bert_output.dense.bias = check_and_map_params(
bert_output.dense.bias, f"encoder.transformer_cells.{i}.ffn.ffn_2.bias"
)
bert_output.dense.weight = check_and_map_params(
bert_output.dense.weight, f"encoder.transformer_cells.{i}.ffn.ffn_2.weight"
)
bert_output.LayerNorm.bias = check_and_map_params(
bert_output.LayerNorm.bias, f"encoder.transformer_cells.{i}.ffn.layer_norm.beta"
)
bert_output.LayerNorm.weight = check_and_map_params(
bert_output.LayerNorm.weight, f"encoder.transformer_cells.{i}.ffn.layer_norm.gamma"
)
# Save space and energy 🎄
hf_bort_model.half()
# Compare output of both models
tokenizer = RobertaTokenizer.from_pretrained("roberta-base")
input_ids = tokenizer.encode_plus(SAMPLE_TEXT)["input_ids"]
# Get gluon output
gluon_input_ids = mx.nd.array([input_ids])
output_gluon = original_bort(inputs=gluon_input_ids, token_types=[])
# Get Transformer output (save and reload model again)
hf_bort_model.save_pretrained(pytorch_dump_folder_path)
hf_bort_model = BertModel.from_pretrained(pytorch_dump_folder_path)
hf_bort_model.eval()
input_ids = tokenizer.encode_plus(SAMPLE_TEXT, return_tensors="pt")
output_hf = hf_bort_model(**input_ids)[0]
gluon_layer = output_gluon[0].asnumpy()
hf_layer = output_hf[0].detach().numpy()
max_absolute_diff = np.max(np.abs(hf_layer - gluon_layer)).item()
success = np.allclose(gluon_layer, hf_layer, atol=1e-3)
if success:
print("✔️ Both model do output the same tensors")
else:
print("❌ Both model do **NOT** output the same tensors")
print("Absolute difference is:", max_absolute_diff)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--bort_checkpoint_path", default=None, type=str, required=True, help="Path the official Bort params file."
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_bort_checkpoint_to_pytorch(args.bort_checkpoint_path, args.pytorch_dump_folder_path)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,688 | src/transformers/models/ctrl/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {
"configuration_ctrl": ["CTRL_PRETRAINED_CONFIG_ARCHIVE_MAP", "CTRLConfig"],
"tokenization_ctrl": ["CTRLTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_ctrl"] = [
"CTRL_PRETRAINED_MODEL_ARCHIVE_LIST",
"CTRLForSequenceClassification",
"CTRLLMHeadModel",
"CTRLModel",
"CTRLPreTrainedModel",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_ctrl"] = [
"TF_CTRL_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFCTRLForSequenceClassification",
"TFCTRLLMHeadModel",
"TFCTRLModel",
"TFCTRLPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_ctrl import CTRL_PRETRAINED_CONFIG_ARCHIVE_MAP, CTRLConfig
from .tokenization_ctrl import CTRLTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_ctrl import (
CTRL_PRETRAINED_MODEL_ARCHIVE_LIST,
CTRLForSequenceClassification,
CTRLLMHeadModel,
CTRLModel,
CTRLPreTrainedModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_ctrl import (
TF_CTRL_PRETRAINED_MODEL_ARCHIVE_LIST,
TFCTRLForSequenceClassification,
TFCTRLLMHeadModel,
TFCTRLModel,
TFCTRLPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 8,491 | src/transformers/models/ctrl/tokenization_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for Salesforce CTRL."""
import json
import os
from typing import Optional, Tuple
import regex as re
from ...tokenization_utils import PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {
"vocab_file": "vocab.json",
"merges_file": "merges.txt",
}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {"ctrl": "https://raw.githubusercontent.com/salesforce/ctrl/master/ctrl-vocab.json"},
"merges_file": {"ctrl": "https://raw.githubusercontent.com/salesforce/ctrl/master/ctrl-merges.txt"},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"ctrl": 256,
}
CONTROL_CODES = {
"Pregnancy": 168629,
"Christianity": 7675,
"Explain": 106423,
"Fitness": 63440,
"Saving": 63163,
"Ask": 27171,
"Ass": 95985,
"Joke": 163509,
"Questions": 45622,
"Thoughts": 49605,
"Retail": 52342,
"Feminism": 164338,
"Writing": 11992,
"Atheism": 192263,
"Netflix": 48616,
"Computing": 39639,
"Opinion": 43213,
"Alone": 44967,
"Funny": 58917,
"Gaming": 40358,
"Human": 4088,
"India": 1331,
"Joker": 77138,
"Diet": 36206,
"Legal": 11859,
"Norman": 4939,
"Tip": 72689,
"Weight": 52343,
"Movies": 46273,
"Running": 23425,
"Science": 2090,
"Horror": 37793,
"Confession": 60572,
"Finance": 12250,
"Politics": 16360,
"Scary": 191985,
"Support": 12654,
"Technologies": 32516,
"Teenage": 66160,
"Event": 32769,
"Learned": 67460,
"Notion": 182770,
"Wikipedia": 37583,
"Books": 6665,
"Extract": 76050,
"Confessions": 102701,
"Conspiracy": 75932,
"Links": 63674,
"Narcissus": 150425,
"Relationship": 54766,
"Relationships": 134796,
"Reviews": 41671,
"News": 4256,
"Translation": 26820,
"multilingual": 128406,
}
def get_pairs(word):
"""
Return set of symbol pairs in a word.
Word is represented as tuple of symbols (symbols being variable-length strings).
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
pairs = set(pairs)
return pairs
class CTRLTokenizer(PreTrainedTokenizer):
"""
Construct a CTRL tokenizer. Based on Byte-Pair-Encoding.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
control_codes = CONTROL_CODES
def __init__(self, vocab_file, merges_file, unk_token="<unk>", **kwargs):
super().__init__(unk_token=unk_token, **kwargs)
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.decoder = {v: k for k, v in self.encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
merges = merges_handle.read().split("\n")[1:-1]
merges = [tuple(merge.split()) for merge in merges]
self.bpe_ranks = dict(zip(merges, range(len(merges))))
self.cache = {}
@property
def vocab_size(self):
return len(self.encoder)
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def bpe(self, token):
if token in self.cache:
return self.cache[token]
word = tuple(token)
word = tuple(list(word[:-1]) + [word[-1] + "</w>"])
pairs = get_pairs(word)
if not pairs:
return token
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = "@@ ".join(word)
word = word[:-4]
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
split_tokens = []
words = re.findall(r"\S+\n?", text)
for token in words:
split_tokens.extend(list(self.bpe(token).split(" ")))
return split_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = " ".join(tokens).replace("@@ ", "").strip()
return out_string
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
index = 0
with open(merge_file, "w", encoding="utf-8") as writer:
writer.write("#version: 0.2\n")
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merge_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return vocab_file, merge_file
# def decode(self, token_ids, skip_special_tokens=False, clean_up_tokenization_spaces=True):
# filtered_tokens = ' '.join(self.convert_ids_to_tokens(token_ids, skip_special_tokens=skip_special_tokens))
# tokens_generated_so_far = re.sub('(@@ )', '', string=filtered_tokens)
# tokens_generated_so_far = re.sub('(@@ ?$)', '', string=tokens_generated_so_far)
# return ''.join(tokens_generated_so_far)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 4,738 | src/transformers/models/ctrl/configuration_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Salesforce CTRL configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
CTRL_PRETRAINED_CONFIG_ARCHIVE_MAP = {"ctrl": "https://huggingface.co/ctrl/resolve/main/config.json"}
class CTRLConfig(PretrainedConfig):
"""
This is the configuration class to store the configuration of a [`CTRLModel`] or a [`TFCTRLModel`]. It is used to
instantiate a CTRL model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the
[ctrl](https://huggingface.co/ctrl) architecture from SalesForce.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 246534):
Vocabulary size of the CTRL model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`CTRLModel`] or [`TFCTRLModel`].
n_positions (`int`, *optional*, defaults to 256):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
n_embd (`int`, *optional*, defaults to 1280):
Dimensionality of the embeddings and hidden states.
dff (`int`, *optional*, defaults to 8192):
Dimensionality of the inner dimension of the feed forward networks (FFN).
n_layer (`int`, *optional*, defaults to 48):
Number of hidden layers in the Transformer encoder.
n_head (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer encoder.
resid_pdrop (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
embd_pdrop (`int`, *optional*, defaults to 0.1):
The dropout ratio for the embeddings.
layer_norm_epsilon (`float`, *optional*, defaults to 1e-6):
The epsilon to use in the layer normalization layers
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
Examples:
```python
>>> from transformers import CTRLConfig, CTRLModel
>>> # Initializing a CTRL configuration
>>> configuration = CTRLConfig()
>>> # Initializing a model (with random weights) from the configuration
>>> model = CTRLModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "ctrl"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {
"max_position_embeddings": "n_positions",
"hidden_size": "n_embd",
"num_attention_heads": "n_head",
"num_hidden_layers": "n_layer",
}
def __init__(
self,
vocab_size=246534,
n_positions=256,
n_embd=1280,
dff=8192,
n_layer=48,
n_head=16,
resid_pdrop=0.1,
embd_pdrop=0.1,
layer_norm_epsilon=1e-6,
initializer_range=0.02,
use_cache=True,
**kwargs,
):
self.vocab_size = vocab_size
self.n_positions = n_positions
self.n_embd = n_embd
self.n_layer = n_layer
self.n_head = n_head
self.dff = dff
self.resid_pdrop = resid_pdrop
self.embd_pdrop = embd_pdrop
self.layer_norm_epsilon = layer_norm_epsilon
self.initializer_range = initializer_range
self.use_cache = use_cache
super().__init__(**kwargs)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 37,093 | src/transformers/models/ctrl/modeling_tf_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 CTRL model."""
import warnings
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...modeling_tf_outputs import TFBaseModelOutputWithPast, TFCausalLMOutputWithPast, TFSequenceClassifierOutput
from ...modeling_tf_utils import (
TFCausalLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
TFSharedEmbeddings,
get_initializer,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import shape_list, stable_softmax
from ...utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_ctrl import CTRLConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "ctrl"
_CONFIG_FOR_DOC = "CTRLConfig"
TF_CTRL_PRETRAINED_MODEL_ARCHIVE_LIST = [
"ctrl"
# See all CTRL models at https://huggingface.co/models?filter=ctrl
]
def angle_defn(pos, i, d_model_size):
angle_rates = 1 / np.power(10000, (2 * (i // 2)) / d_model_size)
return pos * angle_rates
def positional_encoding(position, d_model_size):
# create the sinusoidal pattern for the positional encoding
angle_rads = angle_defn(np.arange(position)[:, np.newaxis], np.arange(d_model_size)[np.newaxis, :], d_model_size)
sines = np.sin(angle_rads[:, 0::2])
cosines = np.cos(angle_rads[:, 1::2])
pos_encoding = tf.convert_to_tensor(np.concatenate([sines, cosines], axis=-1))
return pos_encoding
def scaled_dot_product_attention(q, k, v, mask, attention_mask=None, head_mask=None):
# calculate attention
matmul_qk = tf.matmul(q, k, transpose_b=True)
dk = tf.cast(shape_list(k)[-1], dtype=matmul_qk.dtype)
scaled_attention_logits = matmul_qk / tf.math.sqrt(dk)
if mask is not None:
scaled_attention_logits += tf.cast(mask * -1e4, dtype=scaled_attention_logits.dtype)
if attention_mask is not None:
# Apply the attention mask
attention_mask = tf.cast(attention_mask, dtype=scaled_attention_logits.dtype)
scaled_attention_logits = scaled_attention_logits + attention_mask
attention_weights = stable_softmax(scaled_attention_logits, axis=-1)
# Mask heads if we want to
if head_mask is not None:
attention_weights = attention_weights * head_mask
output = tf.matmul(attention_weights, v)
return output, attention_weights
class TFMultiHeadAttention(tf.keras.layers.Layer):
def __init__(self, d_model_size, num_heads, output_attentions=False, **kwargs):
super().__init__(**kwargs)
self.num_heads = num_heads
self.d_model_size = d_model_size
self.output_attentions = output_attentions
self.depth = int(d_model_size / self.num_heads)
self.Wq = tf.keras.layers.Dense(d_model_size, name="Wq")
self.Wk = tf.keras.layers.Dense(d_model_size, name="Wk")
self.Wv = tf.keras.layers.Dense(d_model_size, name="Wv")
self.dense = tf.keras.layers.Dense(d_model_size, name="dense")
def split_into_heads(self, x, batch_size):
x = tf.reshape(x, (batch_size, -1, self.num_heads, self.depth))
return tf.transpose(x, perm=[0, 2, 1, 3])
def call(self, v, k, q, mask, layer_past, attention_mask, head_mask, use_cache, output_attentions, training=False):
batch_size = shape_list(q)[0]
q = self.Wq(q)
k = self.Wk(k)
v = self.Wv(v)
q = self.split_into_heads(q, batch_size)
k = self.split_into_heads(k, batch_size)
v = self.split_into_heads(v, batch_size)
if layer_past is not None:
past_key, past_value = tf.unstack(layer_past, axis=0)
k = tf.concat((past_key, k), axis=-2)
v = tf.concat((past_value, v), axis=-2)
if use_cache:
present = tf.stack((k, v), axis=0)
else:
present = (None,)
output = scaled_dot_product_attention(q, k, v, mask, attention_mask, head_mask)
scaled_attention = tf.transpose(output[0], perm=[0, 2, 1, 3])
attn = output[1]
original_size_attention = tf.reshape(scaled_attention, (batch_size, -1, self.d_model_size))
output = self.dense(original_size_attention)
outputs = (output, present)
if output_attentions:
outputs = outputs + (attn,)
return outputs
class TFPointWiseFeedForwardLayer(tf.keras.layers.Layer):
def __init__(self, d_model_size, dff, **kwargs):
super().__init__(**kwargs)
self.dense_0 = tf.keras.layers.Dense(dff, activation="relu", name="0")
self.dense_2 = tf.keras.layers.Dense(d_model_size, name="2")
def call(self, inputs, trainable=False):
dense_0_output = self.dense_0(inputs)
dense_2_output = self.dense_2(dense_0_output)
return dense_2_output
class TFEncoderLayer(tf.keras.layers.Layer):
def __init__(
self, d_model_size, num_heads, dff, rate=0.1, layer_norm_epsilon=1e-6, output_attentions=False, **kwargs
):
super().__init__(**kwargs)
self.output_attentions = output_attentions
self.multi_head_attention = TFMultiHeadAttention(
d_model_size, num_heads, output_attentions=self.output_attentions, name="multi_head_attention"
)
self.ffn = TFPointWiseFeedForwardLayer(d_model_size, dff, name="ffn")
self.layernorm1 = tf.keras.layers.LayerNormalization(epsilon=layer_norm_epsilon, name="layernorm1")
self.layernorm2 = tf.keras.layers.LayerNormalization(epsilon=layer_norm_epsilon, name="layernorm2")
self.dropout1 = tf.keras.layers.Dropout(rate)
self.dropout2 = tf.keras.layers.Dropout(rate)
def call(self, x, mask, layer_past, attention_mask, head_mask, use_cache, output_attentions, training=False):
normed = self.layernorm1(x)
attn_outputs = self.multi_head_attention(
normed,
normed,
normed,
mask,
layer_past,
attention_mask,
head_mask,
use_cache,
output_attentions,
training=training,
)
attn_output = attn_outputs[0]
attn_output = self.dropout1(attn_output, training=training)
out1 = x + attn_output
out2 = self.layernorm2(out1)
ffn_output = self.ffn(out2)
ffn_output = self.dropout2(ffn_output, training=training)
out2 = out1 + ffn_output
outputs = (out2,) + attn_outputs[1:]
return outputs
@keras_serializable
class TFCTRLMainLayer(tf.keras.layers.Layer):
config_class = CTRLConfig
def __init__(self, config, **kwargs):
super().__init__(**kwargs)
self.config = config
self.output_hidden_states = config.output_hidden_states
self.output_attentions = config.output_attentions
self.use_cache = config.use_cache
self.return_dict = config.use_return_dict
self.d_model_size = config.n_embd
self.num_layers = config.n_layer
self.pos_encoding = positional_encoding(config.n_positions, self.d_model_size)
self.w = TFSharedEmbeddings(
config.vocab_size, config.n_embd, initializer_range=config.initializer_range, name="w"
)
self.dropout = tf.keras.layers.Dropout(config.embd_pdrop)
self.h = [
TFEncoderLayer(
config.n_embd,
config.n_head,
config.dff,
config.resid_pdrop,
config.layer_norm_epsilon,
self.output_attentions,
name=f"h_._{i}",
)
for i in range(config.n_layer)
]
self.layernorm = tf.keras.layers.LayerNormalization(epsilon=config.layer_norm_epsilon, name="layernorm")
def get_input_embeddings(self):
return self.w
def set_input_embeddings(self, value):
self.w.weight = value
self.w.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer}
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids: Optional[TFModelInputType] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutputWithPast]:
# If using past key value states, only the last tokens
# should be given as an input
if past_key_values is not None:
if input_ids is not None:
input_ids = input_ids[:, -1:]
if inputs_embeds is not None:
inputs_embeds = inputs_embeds[:, -1:]
if token_type_ids is not None:
token_type_ids = token_type_ids[:, -1:]
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
input_ids = tf.reshape(input_ids, [-1, input_shape[-1]])
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if past_key_values is None:
past_length = 0
past_key_values = [None] * len(self.h)
else:
past_length = shape_list(past_key_values[0][0])[-2]
if position_ids is None:
position_ids = tf.expand_dims(tf.range(past_length, input_shape[-1] + past_length, dtype=tf.int32), axis=0)
position_ids = tf.tile(position_ids, [input_shape[0], 1])
# Attention mask.
if attention_mask is not None:
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
one_cst = tf.constant(1.0)
ten_thousand_cst = tf.constant(-10000.0)
attention_mask = tf.cast(attention_mask, dtype=one_cst.dtype)
attention_mask = tf.multiply(tf.subtract(one_cst, attention_mask), ten_thousand_cst)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# head_mask has shape n_layer x batch x n_heads x N x N
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.num_layers
if token_type_ids is not None:
token_type_ids = tf.reshape(token_type_ids, [-1, shape_list(token_type_ids)[-1]])
token_type_embeds = self.w(token_type_ids, mode="embedding")
token_type_embeds *= tf.math.sqrt(tf.cast(self.d_model_size, dtype=token_type_embeds.dtype))
else:
token_type_embeds = tf.constant(0.0)
position_ids = tf.reshape(position_ids, [-1, shape_list(position_ids)[-1]])
if inputs_embeds is None:
# Note: tf.gather, on which the embedding layer is based, won't check positive out of bound
# indices on GPU, returning zeros instead. This is a dangerous silent behavior.
tf.debugging.assert_less(
input_ids,
tf.cast(self.w.vocab_size, dtype=input_ids.dtype),
message=(
"input_ids must be smaller than the embedding layer's input dimension (got"
f" {tf.math.reduce_max(input_ids)} >= {self.w.vocab_size})"
),
)
inputs_embeds = self.w(input_ids, mode="embedding")
seq_len = input_shape[-1]
mask = 1 - tf.linalg.band_part(tf.ones((seq_len, seq_len)), -1, 0)
inputs_embeds *= tf.math.sqrt(tf.cast(self.d_model_size, inputs_embeds.dtype))
pos_embeds = tf.gather(self.pos_encoding, position_ids)
pos_embeds = tf.cast(pos_embeds, dtype=token_type_embeds.dtype)
hidden_states = inputs_embeds + pos_embeds + token_type_embeds
hidden_states = self.dropout(hidden_states, training=training)
output_shape = input_shape + [shape_list(hidden_states)[-1]]
presents = () if use_cache else None
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, (h, layer_past) in enumerate(zip(self.h, past_key_values)):
if output_hidden_states:
all_hidden_states = all_hidden_states + (tf.reshape(hidden_states, output_shape),)
outputs = h(
hidden_states,
mask,
layer_past,
attention_mask,
head_mask[i],
use_cache,
output_attentions,
training=training,
)
hidden_states, present = outputs[:2]
if use_cache:
presents = presents + (present,)
if output_attentions:
all_attentions = all_attentions + (outputs[2],)
hidden_states = self.layernorm(hidden_states)
hidden_states = tf.reshape(hidden_states, output_shape)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if output_attentions:
# let the number of heads free (-1) so we can extract attention even after head pruning
attention_output_shape = input_shape[:-1] + [-1] + shape_list(all_attentions[0])[-2:]
all_attentions = tuple(tf.reshape(t, attention_output_shape) for t in all_attentions)
if not return_dict:
return tuple(v for v in [hidden_states, presents, all_hidden_states, all_attentions] if v is not None)
return TFBaseModelOutputWithPast(
last_hidden_state=hidden_states,
past_key_values=presents,
hidden_states=all_hidden_states,
attentions=all_attentions,
)
class TFCTRLPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = CTRLConfig
base_model_prefix = "transformer"
CTRL_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Parameters:
config ([`CTRLConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
CTRL_INPUTS_DOCSTRING = r"""
Args:
input_ids (`Numpy array` or `tf.Tensor` of shape `(batch_size, input_ids_length)`):
`input_ids_length` = `sequence_length` if `past` is `None` else `past[0].shape[-2]` (`sequence_length` of
input past key value states).
Indices of input sequence tokens in the vocabulary.
If `past` is used, only input IDs that do not have their past calculated should be passed as `input_ids`.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
past (`List[tf.Tensor]` of length `config.n_layers`):
Contains pre-computed hidden-states (key and values in the attention blocks) as computed by the model (see
`past` output below). Can be used to speed up sequential decoding. The token ids which have their past
given to this model should not be passed as input ids as they have already been computed.
attention_mask (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` or `Numpy array` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
use_cache (`bool`, *optional*):
If set to `True`, `past` key value states are returned and can be used to speed up decoding (see `past`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@add_start_docstrings(
"The bare CTRL Model transformer outputting raw hidden-states without any specific head on top.",
CTRL_START_DOCSTRING,
)
class TFCTRLModel(TFCTRLPreTrainedModel):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFCTRLMainLayer(config, name="transformer")
@unpack_inputs
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPast,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFBaseModelOutputWithPast]:
outputs = self.transformer(
input_ids=input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def serving_output(self, output):
pkv = tf.convert_to_tensor(output.past_key_values) if self.config.use_cache else None
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFBaseModelOutputWithPast(
last_hidden_state=output.last_hidden_state, past_key_values=pkv, hidden_states=hs, attentions=attns
)
class TFCTRLLMHead(tf.keras.layers.Layer):
def __init__(self, config, input_embeddings, **kwargs):
super().__init__(**kwargs)
self.config = config
# CTRL has numerical issues in XLA generate
self.supports_xla_generation = False
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.input_embeddings = input_embeddings
def build(self, input_shape):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
super().build(input_shape)
def get_output_embeddings(self):
return self.input_embeddings
def set_output_embeddings(self, value):
self.input_embeddings.weight = value
self.input_embeddings.vocab_size = shape_list(value)[0]
def get_bias(self):
return {"bias": self.bias}
def set_bias(self, value):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states):
hidden_states = self.input_embeddings(hidden_states, mode="linear")
hidden_states = hidden_states + self.bias
return hidden_states
@add_start_docstrings(
"""
The CTRL Model transformer with a language modeling head on top (linear layer with weights tied to the input
embeddings).
""",
CTRL_START_DOCSTRING,
)
class TFCTRLLMHeadModel(TFCTRLPreTrainedModel, TFCausalLanguageModelingLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.transformer = TFCTRLMainLayer(config, name="transformer")
self.lm_head = TFCTRLLMHead(config, self.transformer.w, name="lm_head")
# CTRL has numerical issues in XLA generate
self.supports_xla_generation = False
def get_lm_head(self):
return self.lm_head
def get_prefix_bias_name(self):
warnings.warn("The method get_prefix_bias_name is deprecated. Please use `get_bias` instead.", FutureWarning)
return self.name + "/" + self.lm_head.name
def prepare_inputs_for_generation(self, input_ids, past_key_values=None, use_cache=None, **kwargs):
# only last token for inputs_ids if past is defined in kwargs
if past_key_values:
input_ids = tf.expand_dims(input_ids[:, -1], -1)
return {"input_ids": input_ids, "past_key_values": past_key_values, "use_cache": use_cache}
@unpack_inputs
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFCausalLMOutputWithPast,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFCausalLMOutputWithPast]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the cross entropy classification loss. Indices should be in `[0, ...,
config.vocab_size - 1]`.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = transformer_outputs[0]
logits = self.lm_head(hidden_states)
loss = None
if labels is not None:
# shift labels to the left and cut last logit token
shifted_logits = logits[:, :-1]
labels = labels[:, 1:]
loss = self.hf_compute_loss(labels, shifted_logits)
if not return_dict:
output = (logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFCausalLMOutputWithPast(
loss=loss,
logits=logits,
past_key_values=transformer_outputs.past_key_values,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
def serving_output(self, output):
pkv = tf.convert_to_tensor(output.past_key_values) if self.config.use_cache else None
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFCausalLMOutputWithPast(logits=output.logits, past_key_values=pkv, hidden_states=hs, attentions=attns)
@add_start_docstrings(
"""
The CTRL Model transformer with a sequence classification head on top (linear layer).
[`TFCTRLForSequenceClassification`] uses the last token in order to do the classification, as other causal models
(e.g. GPT-1, GPT-2) do.
Since it does classification on the last token, it requires to know the position of the last token. If a
`pad_token_id` is defined in the configuration, it finds the last token that is not a padding token in each row. If
no `pad_token_id` is defined, it simply takes the last value in each row of the batch. Since it cannot guess the
padding tokens when `inputs_embeds` are passed instead of `input_ids`, it does the same (take the last value in
each row of the batch).
""",
CTRL_START_DOCSTRING,
)
class TFCTRLForSequenceClassification(TFCTRLPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.classifier = tf.keras.layers.Dense(
config.num_labels,
kernel_initializer=get_initializer(config.initializer_range),
name="classifier",
use_bias=False,
)
self.transformer = TFCTRLMainLayer(config, name="transformer")
def get_output_embeddings(self):
return self.transformer.w
@unpack_inputs
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
token_type_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
training: Optional[bool] = False,
) -> Union[Tuple, TFSequenceClassifierOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the cross entropy classification loss. Indices should be in `[0, ...,
config.vocab_size - 1]`.
"""
transformer_outputs = self.transformer(
input_ids=input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
hidden_states = transformer_outputs[0]
logits = self.classifier(hidden_states)
in_logits = None
if self.config.pad_token_id is None:
sequence_lengths = -1
else:
if input_ids is not None:
sequence_lengths = (
tf.reduce_sum(
tf.cast(
tf.math.not_equal(input_ids, self.config.pad_token_id),
dtype=input_ids.dtype,
),
-1,
keepdims=False,
)
- 1
)
in_logits = tf.gather(logits, sequence_lengths, batch_dims=1, axis=1)
else:
sequence_lengths = -1
logger.warning(
f"{self.__class__.__name__} will not detect padding tokens in `inputs_embeds`. Results may be "
"unexpected if using padding tokens in conjunction with `inputs_embeds.`"
)
loss = None
if labels is not None:
if input_ids is not None:
batch_size, sequence_length = shape_list(input_ids)[:2]
else:
batch_size, sequence_length = shape_list(inputs_embeds)[:2]
if self.config.pad_token_id is None and batch_size != 1:
raise ValueError("Cannot handle batch sizes > 1 if no padding token is defined.")
if not tf.is_tensor(sequence_lengths):
in_logits = logits[0:batch_size, sequence_lengths]
loss = self.hf_compute_loss(tf.reshape(labels, [-1, 1]), tf.reshape(in_logits, [-1, self.num_labels]))
pooled_logits = in_logits if in_logits is not None else logits
if not return_dict:
output = (pooled_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=pooled_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForSequenceClassification.serving_output
def serving_output(self, output: TFSequenceClassifierOutput) -> TFSequenceClassifierOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFSequenceClassifierOutput(logits=output.logits, hidden_states=hs, attentions=attns)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 34,923 | src/transformers/models/ctrl/modeling_ctrl.py | # coding=utf-8
# Copyright 2018 Salesforce and HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch CTRL model."""
from typing import Optional, Tuple, Union
import numpy as np
import torch
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...modeling_outputs import BaseModelOutputWithPast, CausalLMOutputWithPast, SequenceClassifierOutput
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import Conv1D, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_ctrl import CTRLConfig
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "CTRLConfig"
CTRL_PRETRAINED_MODEL_ARCHIVE_LIST = [
"ctrl"
# See all CTRL models at https://huggingface.co/models?filter=ctrl
]
def angle_defn(pos, i, d_model_size):
angle_rates = 1 / torch.pow(10000, (2 * (i // 2)) / d_model_size)
return pos * angle_rates
def positional_encoding(position, d_model_size, dtype):
# create the sinusoidal pattern for the positional encoding
angle_rads = angle_defn(
torch.arange(position, dtype=dtype).unsqueeze(1),
torch.arange(d_model_size, dtype=dtype).unsqueeze(0),
d_model_size,
)
sines = torch.sin(angle_rads[:, 0::2])
cosines = torch.cos(angle_rads[:, 1::2])
pos_encoding = torch.cat([sines, cosines], dim=-1)
return pos_encoding
def scaled_dot_product_attention(q, k, v, mask, attention_mask=None, head_mask=None):
# calculate attention
matmul_qk = torch.matmul(q, k.permute(0, 1, 3, 2))
dk = k.shape[-1]
scaled_attention_logits = matmul_qk / np.sqrt(dk)
if mask is not None:
nd, ns = scaled_attention_logits.size(-2), scaled_attention_logits.size(-1)
scaled_attention_logits += mask[ns - nd : ns, :ns] * -1e4
if attention_mask is not None:
# Apply the attention mask
scaled_attention_logits = scaled_attention_logits + attention_mask
attention_weights = torch.softmax(scaled_attention_logits, dim=-1)
# Mask heads if we want to
if head_mask is not None:
attention_weights = attention_weights * head_mask
output = torch.matmul(attention_weights, v)
return output, attention_weights
class MultiHeadAttention(nn.Module):
def __init__(self, d_model_size, num_heads):
super().__init__()
self.num_heads = num_heads
self.d_model_size = d_model_size
self.depth = int(d_model_size / self.num_heads)
self.Wq = nn.Linear(d_model_size, d_model_size)
self.Wk = nn.Linear(d_model_size, d_model_size)
self.Wv = nn.Linear(d_model_size, d_model_size)
self.dense = nn.Linear(d_model_size, d_model_size)
self.pruned_heads = set()
def prune_heads(self, heads):
attention_head_size = self.d_model_size // self.num_heads
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(heads, self.num_heads, attention_head_size, self.pruned_heads)
# Prune linear layers
self.Wq = prune_linear_layer(self.Wq, index)
self.Wk = prune_linear_layer(self.Wk, index)
self.Wv = prune_linear_layer(self.Wv, index)
self.dense = prune_linear_layer(self.dense, index, dim=1)
# Update hyper params
self.num_heads = self.num_heads - len(heads)
self.d_model_size = attention_head_size * self.num_heads
self.pruned_heads = self.pruned_heads.union(heads)
def split_into_heads(self, x, batch_size):
x = x.reshape(batch_size, -1, self.num_heads, self.depth)
return x.permute([0, 2, 1, 3])
def forward(
self,
v,
k,
q,
mask,
layer_past=None,
attention_mask=None,
head_mask=None,
use_cache=False,
output_attentions=False,
):
batch_size = q.shape[0]
q = self.Wq(q)
k = self.Wk(k)
v = self.Wv(v)
q = self.split_into_heads(q, batch_size)
k = self.split_into_heads(k, batch_size)
v = self.split_into_heads(v, batch_size)
if layer_past is not None:
past_key, past_value = layer_past[0], layer_past[1]
k = torch.cat((past_key, k), dim=-2)
v = torch.cat((past_value, v), dim=-2)
if use_cache is True:
present = torch.stack((k, v))
else:
present = (None,)
output = scaled_dot_product_attention(q, k, v, mask, attention_mask, head_mask)
scaled_attention = output[0].permute([0, 2, 1, 3])
attn = output[1]
original_size_attention = scaled_attention.reshape(batch_size, -1, self.d_model_size)
output = self.dense(original_size_attention)
outputs = (output, present)
if output_attentions:
outputs = outputs + (attn,)
return outputs
def point_wise_feed_forward_network(d_model_size, dff):
return nn.Sequential(nn.Linear(d_model_size, dff), nn.ReLU(), nn.Linear(dff, d_model_size))
class EncoderLayer(nn.Module):
def __init__(self, d_model_size, num_heads, dff, rate=0.1):
super().__init__()
self.multi_head_attention = MultiHeadAttention(d_model_size, num_heads)
self.ffn = point_wise_feed_forward_network(d_model_size, dff)
self.layernorm1 = nn.LayerNorm(d_model_size, eps=1e-6)
self.layernorm2 = nn.LayerNorm(d_model_size, eps=1e-6)
self.dropout1 = nn.Dropout(rate)
self.dropout2 = nn.Dropout(rate)
def forward(
self, x, mask, layer_past=None, attention_mask=None, head_mask=None, use_cache=False, output_attentions=False
):
normed = self.layernorm1(x)
attn_outputs = self.multi_head_attention(
normed,
normed,
normed,
mask,
layer_past=layer_past,
attention_mask=attention_mask,
head_mask=head_mask,
use_cache=use_cache,
output_attentions=output_attentions,
)
attn_output = attn_outputs[0]
attn_output = self.dropout1(attn_output)
out1 = x + attn_output
out2 = self.layernorm2(out1)
ffn_output = self.ffn(out2)
ffn_output = self.dropout2(ffn_output)
out2 = out1 + ffn_output
outputs = (out2,) + attn_outputs[1:]
return outputs
class CTRLPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = CTRLConfig
base_model_prefix = "transformer"
def _init_weights(self, module):
"""Initialize the weights."""
if isinstance(module, (nn.Linear, Conv1D)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
CTRL_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`CTRLConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
CTRL_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
`input_ids_length` = `sequence_length` if `past_key_values` is `None` else `past_key_values[0].shape[-2]`
(`sequence_length` of input past key value states). Indices of input sequence tokens in the vocabulary.
If `past_key_values` is used, only input IDs that do not have their past calculated should be passed as
`input_ids`.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.__call__`] and
[`PreTrainedTokenizer.encode`] for details.
[What are input IDs?](../glossary#input-ids)
past_key_values (`Tuple[Tuple[torch.FloatTensor]]` of length `config.n_layers`):
Contains pre-computed hidden-states (key and values in the attention blocks) as computed by the model (see
`past_key_values` output below). Can be used to speed up sequential decoding. The `input_ids` which have
their past given to this model should not be passed as input ids as they have already been computed.
attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare CTRL Model transformer outputting raw hidden-states without any specific head on top.",
CTRL_START_DOCSTRING,
)
class CTRLModel(CTRLPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.d_model_size = config.n_embd
self.num_layers = config.n_layer
self.pos_encoding = positional_encoding(config.n_positions, self.d_model_size, torch.float)
self.w = nn.Embedding(config.vocab_size, config.n_embd)
self.dropout = nn.Dropout(config.embd_pdrop)
self.h = nn.ModuleList(
[EncoderLayer(config.n_embd, config.n_head, config.dff, config.resid_pdrop) for _ in range(config.n_layer)]
)
self.layernorm = nn.LayerNorm(config.n_embd, eps=config.layer_norm_epsilon)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.w
def set_input_embeddings(self, new_embeddings):
self.w = new_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer}
"""
for layer, heads in heads_to_prune.items():
self.h[layer].multi_head_attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPast, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPast]:
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, CTRLModel
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("ctrl")
>>> model = CTRLModel.from_pretrained("ctrl")
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Opinion My dog is cute", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
>>> list(last_hidden_states.shape)
[1, 5, 1280]
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
use_cache = use_cache if use_cache is not None else self.config.use_cache
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
batch_size = input_ids.shape[0]
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
batch_size = inputs_embeds.shape[0]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if past_key_values is None:
past_length = 0
past_key_values = tuple([None] * len(self.h))
else:
past_length = past_key_values[0][0].size(-2)
if position_ids is None:
position_ids = torch.arange(past_length, input_shape[-1] + past_length, dtype=torch.long, device=device)
position_ids = position_ids.unsqueeze(0).view(-1, input_shape[-1])
# Attention mask.
if attention_mask is not None:
if batch_size <= 0:
raise ValueError("batch_size has to be defined and > 0")
attention_mask = attention_mask.view(batch_size, -1)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and the dtype's smallest value for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
attention_mask = attention_mask.to(dtype=self.dtype) # fp16 compatibility
attention_mask = (1.0 - attention_mask) * torch.finfo(self.dtype).min
# Prepare head mask if needed
head_mask = self.get_head_mask(head_mask, self.config.n_layer)
if token_type_ids is not None:
token_type_ids = token_type_ids.view(-1, input_shape[-1])
token_type_embeds = self.w(token_type_ids)
token_type_embeds *= np.sqrt(self.d_model_size)
else:
token_type_embeds = 0
position_ids = position_ids.view(-1, input_shape[-1])
if inputs_embeds is None:
inputs_embeds = self.w(input_ids)
# inputs_embeds = embedded.unsqueeze(0) if len(input_ids.shape)<2 else embedded
seq_len = input_shape[-1]
mask = torch.triu(torch.ones(seq_len + past_length, seq_len + past_length), 1).to(device)
inputs_embeds *= np.sqrt(self.d_model_size)
# `self.pos_encoding` won't be sent to the correct device along the model, so we do it manually.
self.pos_encoding = self.pos_encoding.to(device)
pos_embeds = self.pos_encoding[position_ids, :]
hidden_states = inputs_embeds + pos_embeds + token_type_embeds
hidden_states = self.dropout(hidden_states)
presents = () if use_cache else None
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
for i, (h, layer_past) in enumerate(zip(self.h, past_key_values)):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
outputs = h(
hidden_states,
mask,
layer_past=layer_past,
attention_mask=attention_mask,
head_mask=head_mask[i],
use_cache=use_cache,
output_attentions=output_attentions,
)
hidden_states, present = outputs[:2]
if use_cache is True:
presents = presents + (present,)
if output_attentions:
all_attentions += (outputs[2],)
hidden_states = self.layernorm(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, presents, all_hidden_states, all_attentions] if v is not None)
return BaseModelOutputWithPast(
last_hidden_state=hidden_states,
past_key_values=presents,
hidden_states=all_hidden_states,
attentions=all_attentions,
)
@add_start_docstrings(
"""
The CTRL Model transformer with a language modeling head on top (linear layer with weights tied to the input
embeddings).
""",
CTRL_START_DOCSTRING,
)
class CTRLLMHeadModel(CTRLPreTrainedModel):
_keys_to_ignore_on_load_missing = ["lm_head.weight"]
def __init__(self, config):
super().__init__(config)
self.transformer = CTRLModel(config)
self.lm_head = nn.Linear(config.n_embd, config.vocab_size, bias=True)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def prepare_inputs_for_generation(self, input_ids, past_key_values=None, use_cache=None, **kwargs):
# only last token for inputs_ids if past is defined in kwargs
if past_key_values:
input_ids = input_ids[:, -1].unsqueeze(-1)
return {"input_ids": input_ids, "past_key_values": past_key_values, "use_cache": use_cache}
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=CausalLMOutputWithPast, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], CausalLMOutputWithPast]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for language modeling. Note that the labels **are shifted** inside the model, i.e. you can set
`labels = input_ids` Indices are selected in `[-100, 0, ..., config.vocab_size]` All labels set to `-100`
are ignored (masked), the loss is only computed for labels in `[0, ..., config.vocab_size]`
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, CTRLLMHeadModel
>>> tokenizer = AutoTokenizer.from_pretrained("ctrl")
>>> model = CTRLLMHeadModel.from_pretrained("ctrl")
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Wikipedia The llama is", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> sequence_ids = model.generate(inputs["input_ids"])
>>> sequences = tokenizer.batch_decode(sequence_ids)
>>> sequences
['Wikipedia The llama is a member of the family Bovidae. It is native to the Andes of Peru,']
>>> outputs = model(**inputs, labels=inputs["input_ids"])
>>> round(outputs.loss.item(), 2)
9.21
>>> list(outputs.logits.shape)
[1, 5, 246534]
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
lm_logits = self.lm_head(hidden_states)
loss = None
if labels is not None:
# Shift so that tokens < n predict n
shift_logits = lm_logits[..., :-1, :].contiguous()
shift_labels = labels[..., 1:].contiguous()
# Flatten the tokens
loss_fct = CrossEntropyLoss()
loss = loss_fct(shift_logits.view(-1, shift_logits.size(-1)), shift_labels.view(-1))
if not return_dict:
output = (lm_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return CausalLMOutputWithPast(
loss=loss,
logits=lm_logits,
past_key_values=transformer_outputs.past_key_values,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
@staticmethod
def _reorder_cache(
past_key_values: Tuple[Tuple[torch.Tensor]], beam_idx: torch.Tensor
) -> Tuple[Tuple[torch.Tensor]]:
"""
This function is used to re-order the `past_key_values` cache if [`~PreTrainedModel.beam_search`] or
[`~PreTrainedModel.beam_sample`] is called. This is required to match `past_key_values` with the correct
beam_idx at every generation step.
"""
return tuple(
tuple(past_state.index_select(0, beam_idx.to(past_state.device)) for past_state in layer_past)
for layer_past in past_key_values
)
@add_start_docstrings(
"""
The CTRL Model transformer with a sequence classification head on top (linear layer).
[`CTRLForSequenceClassification`] uses the last token in order to do the classification, as other causal models
(e.g. GPT-2) do. Since it does classification on the last token, it requires to know the position of the last
token. If a `pad_token_id` is defined in the configuration, it finds the last token that is not a padding token in
each row. If no `pad_token_id` is defined, it simply takes the last value in each row of the batch. Since it cannot
guess the padding tokens when `inputs_embeds` are passed instead of `input_ids`, it does the same (take the last
value in each row of the batch).
""",
CTRL_START_DOCSTRING,
)
class CTRLForSequenceClassification(CTRLPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.transformer = CTRLModel(config)
self.classifier = nn.Linear(config.n_embd, self.num_labels, bias=False)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(CTRL_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Example of single-label classification:
```python
>>> import torch
>>> from transformers import AutoTokenizer, CTRLForSequenceClassification
>>> tokenizer = AutoTokenizer.from_pretrained("ctrl")
>>> model = CTRLForSequenceClassification.from_pretrained("ctrl")
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Opinion My dog is cute", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> predicted_class_id = logits.argmax().item()
>>> model.config.id2label[predicted_class_id]
'LABEL_0'
```
```python
>>> import torch
>>> torch.manual_seed(42) # doctest: +IGNORE_RESULT
>>> # To train a model on `num_labels` classes, you can pass `num_labels=num_labels` to `.from_pretrained(...)`
>>> num_labels = len(model.config.id2label)
>>> model = CTRLForSequenceClassification.from_pretrained("ctrl", num_labels=num_labels)
>>> labels = torch.tensor(1)
>>> loss = model(**inputs, labels=labels).loss
>>> round(loss.item(), 2)
0.35
```
Example of multi-label classification:
```python
>>> import torch
>>> from transformers import AutoTokenizer, CTRLForSequenceClassification
>>> tokenizer = AutoTokenizer.from_pretrained("ctrl")
>>> model = CTRLForSequenceClassification.from_pretrained("ctrl", problem_type="multi_label_classification")
>>> # CTRL was trained with control codes as the first token
>>> inputs = tokenizer("Opinion My dog is cute", return_tensors="pt")
>>> assert inputs["input_ids"][0, 0].item() in tokenizer.control_codes.values()
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> predicted_class_id = logits.argmax().item()
>>> model.config.id2label[predicted_class_id]
'LABEL_0'
```
```python
>>> # To train a model on `num_labels` classes, you can pass `num_labels=num_labels` to `.from_pretrained(...)`
>>> num_labels = len(model.config.id2label)
>>> model = CTRLForSequenceClassification.from_pretrained("ctrl", num_labels=num_labels)
>>> num_labels = len(model.config.id2label)
>>> labels = torch.nn.functional.one_hot(torch.tensor([predicted_class_id]), num_classes=num_labels).to(
... torch.float
... )
>>> loss = model(**inputs, labels=labels).loss
>>> loss.backward() # doctest: +IGNORE_RESULT
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.transformer(
input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
logits = self.classifier(hidden_states)
if input_ids is not None:
batch_size, sequence_length = input_ids.shape[:2]
else:
batch_size, sequence_length = inputs_embeds.shape[:2]
if self.config.pad_token_id is None and batch_size != 1:
raise ValueError("Cannot handle batch sizes > 1 if no padding token is defined.")
if self.config.pad_token_id is None:
sequence_lengths = -1
else:
if input_ids is not None:
sequence_lengths = torch.ne(input_ids, self.config.pad_token_id).sum(-1) - 1
else:
sequence_lengths = -1
logger.warning(
f"{self.__class__.__name__} will not detect padding tokens in `inputs_embeds`. Results may be "
"unexpected if using padding tokens in conjunction with `inputs_embeds.`"
)
pooled_logits = logits[range(batch_size), sequence_lengths]
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(pooled_logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(pooled_logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(pooled_logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(pooled_logits, labels)
if not return_dict:
output = (pooled_logits,) + transformer_outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=pooled_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 5,607 | src/transformers/models/esm/tokenization_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for ESM."""
import os
from typing import List, Optional, Union
from ...tokenization_utils import PreTrainedTokenizer
from ...tokenization_utils_base import AddedToken
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.txt"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"facebook/esm2_t6_8M_UR50D": "https://huggingface.co/facebook/esm2_t6_8M_UR50D/resolve/main/vocab.txt",
"facebook/esm2_t12_35M_UR50D": "https://huggingface.co/facebook/esm2_t12_35M_UR50D/resolve/main/vocab.txt",
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"facebook/esm2_t6_8M_UR50D": 1024,
"facebook/esm2_t12_35M_UR50D": 1024,
}
def load_vocab_file(vocab_file):
with open(vocab_file, "r") as f:
lines = f.read().splitlines()
return [l.strip() for l in lines]
class EsmTokenizer(PreTrainedTokenizer):
"""
Constructs an ESM tokenizer.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(self, vocab_file, **kwargs):
super().__init__(**kwargs)
self.all_tokens = load_vocab_file(vocab_file)
self._id_to_token = {ind: tok for ind, tok in enumerate(self.all_tokens)}
self._token_to_id = {tok: ind for ind, tok in enumerate(self.all_tokens)}
self.unk_token = "<unk>"
self.cls_token = "<cls>"
self.pad_token = "<pad>"
self.mask_token = "<mask>"
self.eos_token = "<eos>"
self.unique_no_split_tokens = self.all_tokens
self._create_trie(self.unique_no_split_tokens)
def _convert_id_to_token(self, index: int) -> str:
return self._id_to_token.get(index, self.unk_token)
def _convert_token_to_id(self, token: str) -> int:
return self._token_to_id.get(token, self._token_to_id.get(self.unk_token))
def _tokenize(self, text, **kwargs):
return text.split()
def get_vocab_size(self, with_added_tokens=False):
return len(self._id_to_token)
def get_vocab(self):
return {token: i for i, token in enumerate(self.all_tokens)}
def token_to_id(self, token: str) -> int:
return self._token_to_id.get(token, self._token_to_id.get(self.unk_token))
def id_to_token(self, index: int) -> str:
return self._id_to_token.get(index, self.unk_token)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.eos_token_id]
cls = [self.cls_token_id]
sep = [self.eos_token_id] # No sep token in ESM vocabulary
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List, token_ids_1: Optional[List] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieves sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` or `encode_plus` methods.
Args:
token_ids_0 (`List[int]`):
List of ids of the first sequence.
token_ids_1 (`List[int]`, *optional*):
List of ids of the second sequence.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
if token_ids_1 is not None:
raise ValueError(
"You should not supply a second sequence if the provided sequence of "
"ids is already formatted with special tokens for the model."
)
return [1 if token in self.all_special_ids else 0 for token in token_ids_0]
mask = [1] + ([0] * len(token_ids_0)) + [1]
if token_ids_1 is not None:
mask += [0] * len(token_ids_1) + [1]
return mask
def save_vocabulary(self, save_directory, filename_prefix):
vocab_file = os.path.join(save_directory, (filename_prefix + "-" if filename_prefix else "") + "vocab.txt")
with open(vocab_file, "w") as f:
f.write("\n".join(self.all_tokens))
return (vocab_file,)
@property
def vocab_size(self) -> int:
return self.get_vocab_size(with_added_tokens=False)
def _add_tokens(self, new_tokens: Union[List[str], List[AddedToken]], special_tokens: bool = False) -> int:
return super()._add_tokens(new_tokens, special_tokens=True)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,978 | src/transformers/models/esm/__init__.py | # Copyright 2022 Facebook and The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tf_available, is_torch_available
_import_structure = {
"configuration_esm": ["ESM_PRETRAINED_CONFIG_ARCHIVE_MAP", "EsmConfig"],
"tokenization_esm": ["EsmTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_esm"] = [
"ESM_PRETRAINED_MODEL_ARCHIVE_LIST",
"EsmForMaskedLM",
"EsmForSequenceClassification",
"EsmForTokenClassification",
"EsmModel",
"EsmPreTrainedModel",
]
_import_structure["modeling_esmfold"] = ["EsmForProteinFolding", "EsmFoldPreTrainedModel"]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_esm"] = [
"TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST",
"TFEsmForMaskedLM",
"TFEsmForSequenceClassification",
"TFEsmForTokenClassification",
"TFEsmModel",
"TFEsmPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_esm import ESM_PRETRAINED_CONFIG_ARCHIVE_MAP, EsmConfig
from .tokenization_esm import EsmTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_esm import (
ESM_PRETRAINED_MODEL_ARCHIVE_LIST,
EsmForMaskedLM,
EsmForSequenceClassification,
EsmForTokenClassification,
EsmModel,
EsmPreTrainedModel,
)
from .modeling_esmfold import EsmFoldPreTrainedModel, EsmForProteinFolding
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_esm import (
TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST,
TFEsmForMaskedLM,
TFEsmForSequenceClassification,
TFEsmForTokenClassification,
TFEsmModel,
TFEsmPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 56,456 | src/transformers/models/esm/modeling_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ESM model."""
import math
from typing import List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...file_utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward
from ...modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPoolingAndCrossAttentions,
MaskedLMOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import logging
from .configuration_esm import EsmConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esm2_t6_8M_UR50D"
_CONFIG_FOR_DOC = "EsmConfig"
ESM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/esm2_t6_8M_UR50D",
"facebook/esm2_t12_35M_UR50D",
# This is not a complete list of all ESM models!
# See all ESM models at https://huggingface.co/models?filter=esm
]
def rotate_half(x):
x1, x2 = x.chunk(2, dim=-1)
return torch.cat((-x2, x1), dim=-1)
def apply_rotary_pos_emb(x, cos, sin):
cos = cos[:, :, : x.shape[-2], :]
sin = sin[:, :, : x.shape[-2], :]
return (x * cos) + (rotate_half(x) * sin)
def gelu(x):
"""
This is the gelu implementation from the original ESM repo. Using F.gelu yields subtly wrong results.
"""
return x * 0.5 * (1.0 + torch.erf(x / math.sqrt(2.0)))
def symmetrize(x):
"Make layer symmetric in final two dimensions, used for contact prediction."
return x + x.transpose(-1, -2)
def average_product_correct(x):
"Perform average product correct, used for contact prediction."
a1 = x.sum(-1, keepdims=True)
a2 = x.sum(-2, keepdims=True)
a12 = x.sum((-1, -2), keepdims=True)
avg = a1 * a2
avg.div_(a12) # in-place to reduce memory
normalized = x - avg
return normalized
class RotaryEmbedding(torch.nn.Module):
"""
Rotary position embeddings based on those in
[RoFormer](https://huggingface.co/docs/transformers/model_doc/roformer). Query and keys are transformed by rotation
matrices which depend on their relative positions.
"""
def __init__(self, dim: int):
super().__init__()
# Generate and save the inverse frequency buffer (non trainable)
inv_freq = 1.0 / (10000 ** (torch.arange(0, dim, 2).float() / dim))
inv_freq = inv_freq
self.register_buffer("inv_freq", inv_freq)
self._seq_len_cached = None
self._cos_cached = None
self._sin_cached = None
def _update_cos_sin_tables(self, x, seq_dimension=2):
seq_len = x.shape[seq_dimension]
# Reset the tables if the sequence length has changed,
# or if we're on a new device (possibly due to tracing for instance)
if seq_len != self._seq_len_cached or self._cos_cached.device != x.device:
self._seq_len_cached = seq_len
t = torch.arange(x.shape[seq_dimension], device=x.device).type_as(self.inv_freq)
freqs = torch.outer(t, self.inv_freq)
emb = torch.cat((freqs, freqs), dim=-1).to(x.device)
self._cos_cached = emb.cos()[None, None, :, :]
self._sin_cached = emb.sin()[None, None, :, :]
return self._cos_cached, self._sin_cached
def forward(self, q: torch.Tensor, k: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
self._cos_cached, self._sin_cached = self._update_cos_sin_tables(k, seq_dimension=-2)
return (
apply_rotary_pos_emb(q, self._cos_cached, self._sin_cached),
apply_rotary_pos_emb(k, self._cos_cached, self._sin_cached),
)
class EsmContactPredictionHead(nn.Module):
"""Performs symmetrization, apc, and computes a logistic regression on the output features"""
def __init__(
self,
in_features: int,
bias=True,
eos_idx: int = 2,
):
super().__init__()
self.in_features = in_features
self.eos_idx = eos_idx
self.regression = nn.Linear(in_features, 1, bias)
self.activation = nn.Sigmoid()
def forward(self, tokens, attentions):
# remove eos token attentions
eos_mask = tokens.ne(self.eos_idx).to(attentions)
eos_mask = eos_mask.unsqueeze(1) * eos_mask.unsqueeze(2)
attentions = attentions * eos_mask[:, None, None, :, :]
attentions = attentions[..., :-1, :-1]
# remove cls token attentions
attentions = attentions[..., 1:, 1:]
batch_size, layers, heads, seqlen, _ = attentions.size()
attentions = attentions.view(batch_size, layers * heads, seqlen, seqlen)
# features: batch x channels x tokens x tokens (symmetric)
attentions = attentions.to(
self.regression.weight.device
) # attentions always float32, may need to convert to float16
attentions = average_product_correct(symmetrize(attentions))
attentions = attentions.permute(0, 2, 3, 1)
return self.activation(self.regression(attentions).squeeze(3))
class EsmEmbeddings(nn.Module):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
if config.emb_layer_norm_before:
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
else:
self.layer_norm = None
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer("position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)))
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
self.token_dropout = config.token_dropout
self.mask_token_id = config.mask_token_id
def forward(
self, input_ids=None, attention_mask=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
# Note that if we want to support ESM-1 (not 1b!) in future then we need to support an
# embedding_scale factor here.
embeddings = inputs_embeds
# Matt: ESM has the option to handle masking in MLM in a slightly unusual way. If the token_dropout
# flag is False then it is handled in the same was as BERT/RoBERTa. If it is set to True, however,
# masked tokens are treated as if they were selected for input dropout and zeroed out.
# This "mask-dropout" is compensated for when masked tokens are not present, by scaling embeddings by
# a factor of (fraction of unmasked tokens during training) / (fraction of unmasked tokens in sample).
# This is analogous to the way that dropout layers scale down outputs during evaluation when not
# actually dropping out values (or, equivalently, scale up their un-dropped outputs in training).
if self.token_dropout:
embeddings.masked_fill_((input_ids == self.mask_token_id).unsqueeze(-1), 0.0)
mask_ratio_train = 0.15 * 0.8 # Hardcoded as the ratio used in all ESM model training runs
src_lengths = attention_mask.sum(-1)
mask_ratio_observed = (input_ids == self.mask_token_id).sum(-1).float() / src_lengths
embeddings = (embeddings * (1 - mask_ratio_train) / (1 - mask_ratio_observed)[:, None, None]).to(
embeddings.dtype
)
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
if self.layer_norm is not None:
embeddings = self.layer_norm(embeddings)
if attention_mask is not None:
embeddings = (embeddings * attention_mask.unsqueeze(-1)).to(embeddings.dtype)
# Matt: I think this line was copied incorrectly from BERT, disabling it for now.
# embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
class EsmSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
self.rotary_embeddings = None
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
elif self.position_embedding_type == "rotary":
self.rotary_embeddings = RotaryEmbedding(dim=self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Matt: Our BERT model (which this code was derived from) scales attention logits down by sqrt(head_dim).
# ESM scales the query down by the same factor instead. Modulo numerical stability these are equivalent,
# but not when rotary embeddings get involved. Therefore, we scale the query here to match the original
# ESM code and fix rotary embeddings.
query_layer = query_layer * self.attention_head_size**-0.5
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
if self.position_embedding_type == "rotary":
query_layer, key_layer = self.rotary_embeddings(query_layer, key_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = hidden_states.size()[1]
position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in EsmModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class EsmSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states += input_tensor
return hidden_states
class EsmAttention(nn.Module):
def __init__(self, config):
super().__init__()
self.self = EsmSelfAttention(config)
self.output = EsmSelfOutput(config)
self.pruned_heads = set()
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
hidden_states_ln = self.LayerNorm(hidden_states)
self_outputs = self.self(
hidden_states_ln,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
class EsmIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = gelu(hidden_states)
return hidden_states
class EsmOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states, input_tensor):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states += input_tensor
return hidden_states
class EsmLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = EsmAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise RuntimeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = EsmAttention(config)
self.intermediate = EsmIntermediate(config)
self.output = EsmOutput(config)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise AttributeError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated"
" with cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = self.feed_forward_chunk(attention_output)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
attention_output_ln = self.LayerNorm(attention_output)
intermediate_output = self.intermediate(attention_output_ln)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
class EsmEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([EsmLayer(config) for _ in range(config.num_hidden_layers)])
self.emb_layer_norm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.gradient_checkpointing = False
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with `config.gradient_checkpointing=True`. Setting "
"`use_cache=False`..."
)
use_cache = False
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_value, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if self.emb_layer_norm_after:
hidden_states = self.emb_layer_norm_after(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPooler
class EsmPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
class EsmPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = EsmConfig
base_model_prefix = "esm"
_no_split_modules = ["EsmLayer", "EsmFoldTriangularSelfAttentionBlock"]
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
ESM_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`EsmConfig`]): Model configuration class with all the parameters of the
model. Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
ESM_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class EsmModel(EsmPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
_keys_to_ignore_on_load_missing = [r"position_ids"]
supports_gradient_checkpointing = False
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = EsmEmbeddings(config)
self.encoder = EsmEncoder(config)
self.pooler = EsmPooler(config) if add_pooling_layer else None
self.contact_head = EsmContactPredictionHead(
in_features=config.num_hidden_layers * config.num_attention_heads, bias=True
)
# Initialize weights and apply final processing
self.post_init()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, EsmEncoder):
module.gradient_checkpointing = value
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("(batch_size, sequence_length)"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPoolingAndCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
def predict_contacts(self, tokens, attention_mask):
attns = self(tokens, attention_mask=attention_mask, return_dict=True, output_attentions=True).attentions
attns = torch.stack(attns, dim=1) # Matches the original model layout
# In the original model, attentions for padding tokens are completely zeroed out.
# This makes no difference most of the time because the other tokens won't attend to them,
# but it does for the contact prediction task, which takes attentions as input,
# so we have to mimic that here.
attns *= attention_mask.unsqueeze(1).unsqueeze(2).unsqueeze(3)
attns *= attention_mask.unsqueeze(1).unsqueeze(2).unsqueeze(4)
return self.contact_head(tokens, attns)
@add_start_docstrings("""ESM Model with a `language modeling` head on top.""", ESM_START_DOCSTRING)
class EsmForMaskedLM(EsmPreTrainedModel):
_keys_to_ignore_on_load_missing = [r"position_ids", "lm_head.decoder.weight"]
_keys_to_ignore_on_load_unexpected = [r"pooler"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `EsmForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.esm = EsmModel(config, add_pooling_layer=False)
self.lm_head = EsmLMHead(config)
self.init_weights()
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
mask="<mask>",
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask=attention_mask)
class EsmLMHead(nn.Module):
"""ESM Head for masked language modeling."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
def forward(self, features, **kwargs):
x = self.dense(features)
x = gelu(x)
x = self.layer_norm(x)
# project back to size of vocabulary with bias
x = self.decoder(x) + self.bias
return x
@add_start_docstrings(
"""
ESM Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
ESM_START_DOCSTRING,
)
class EsmForSequenceClassification(EsmPreTrainedModel):
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.esm = EsmModel(config, add_pooling_layer=False)
self.classifier = EsmClassificationHead(config)
self.init_weights()
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=SequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
ESM Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
ESM_START_DOCSTRING,
)
class EsmForTokenClassification(EsmPreTrainedModel):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.esm = EsmModel(config, add_pooling_layer=False)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
self.init_weights()
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, TokenClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
# Only keep active parts of the loss
if attention_mask is not None:
active_loss = attention_mask.view(-1) == 1
active_logits = logits.view(-1, self.num_labels)
active_labels = torch.where(
active_loss, labels.view(-1), torch.tensor(loss_fct.ignore_index).type_as(labels)
)
loss = loss_fct(active_logits, active_labels)
else:
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class EsmClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x)
x = self.dense(x)
x = torch.tanh(x)
x = self.dropout(x)
x = self.out_proj(x)
return x
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
|
27182812/ChatGLM-LLaMA-chinese-insturct | 65,293 | src/transformers/models/esm/modeling_tf_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch ESM model."""
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from tensorflow.keras.activations import gelu
from tensorflow.keras.layers import Dense, Dropout, Embedding, Layer, LayerNormalization
from ...file_utils import add_code_sample_docstrings, add_start_docstrings, add_start_docstrings_to_model_forward
from ...modeling_tf_outputs import (
TFBaseModelOutputWithPastAndCrossAttentions,
TFBaseModelOutputWithPoolingAndCrossAttentions,
TFMaskedLMOutput,
TFSequenceClassifierOutput,
TFTokenClassifierOutput,
)
from ...modeling_tf_utils import (
TFMaskedLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSequenceClassificationLoss,
TFTokenClassificationLoss,
get_initializer,
get_tf_activation,
shape_list,
unpack_inputs,
)
from ...tf_utils import stable_softmax
from ...utils import logging
from .configuration_esm import EsmConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esm2_t6_8M_UR50D"
_CONFIG_FOR_DOC = "EsmConfig"
TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/esm2_t6_8M_UR50D",
"facebook/esm2_t12_35M_UR50D",
# This is not a complete list of all ESM models!
# See all ESM models at https://huggingface.co/models?filter=esm
]
def rotate_half(x):
x1, x2 = tf.split(x, 2, axis=-1)
return tf.concat((-x2, x1), axis=-1)
def apply_rotary_pos_emb(x, cos, sin):
cos = cos[:, :, : tf.shape(x)[-2], :]
sin = sin[:, :, : tf.shape(x)[-2], :]
return (x * cos) + (rotate_half(x) * sin)
def symmetrize(x):
"Make layer symmetric in final two dimensions, used for contact prediction."
return x + tf.linalg.matrix_transpose(x) # Transposes last two dimensions only
def average_product_correct(x):
"Perform average product correct, used for contact prediction."
a1 = tf.reduce_sum(x, -1, keepdims=True)
a2 = tf.reduce_sum(x, -2, keepdims=True)
a12 = tf.reduce_sum(x, (-1, -2), keepdims=True)
avg = a1 * a2
avg = avg / a12
normalized = x - avg
return normalized
class TFRotaryEmbedding(Layer):
"""
Rotary position embeddings based on those in
[RoFormer](https://huggingface.co/docs/transformers/model_doc/roformer). Query and keys are transformed by rotation
matrices which depend on their relative positions.
"""
def __init__(self, dim: int, name=None):
super().__init__(name=name)
# Matt: The PyTorch version of this layer does a lot of work to cache values, but we just rely on TF compilation
# and/or XLA to sort out constants like that. It actually may not seem like this layer needs to be stateful at
# all when we benefit from TF compilation, but it does. The reason is that self.inv_freq is a buffer in the
# original implementation, but all the shared ESM checkpoints were trained with fp16 params. This means that
# the inv_freq tensor was stored as a float16, and we need to replicate those lower-precision values or our
# models give different outputs from the original.
self.dim = dim
def build(self, input_shape):
super().build(input_shape)
self.inv_freq = self.add_weight(
"inv_freq", shape=(self.dim // 2,), dtype=tf.float32, initializer=get_initializer(1.0)
)
self.inv_freq.assign(
1.0 / (10000 ** (tf.range(start=0, limit=self.dim, delta=2, dtype=tf.float32) / self.dim))
)
def _compute_cos_sin(self, x, seq_dimension=2):
seq_len = tf.shape(x)[seq_dimension]
t = tf.range(seq_len, dtype=self.inv_freq.dtype)
freqs = tf.einsum("i, j -> ij", t, self.inv_freq) # Outer multiplication
emb = tf.concat((freqs, freqs), axis=-1)[None, None, :, :]
return tf.cos(emb), tf.sin(emb)
def call(self, q: tf.Tensor, k: tf.Tensor) -> Tuple[tf.Tensor, tf.Tensor]:
cos_emb, sin_emb = self._compute_cos_sin(k, seq_dimension=-2)
return (
apply_rotary_pos_emb(q, cos_emb, sin_emb),
apply_rotary_pos_emb(k, cos_emb, sin_emb),
)
class TFEsmContactPredictionHead(Layer):
"""Performs symmetrization, apc, and computes a logistic regression on the output features"""
def __init__(
self,
in_features: int,
bias=True,
eos_idx: int = 2,
name=None,
):
super().__init__(name=name)
self.eos_idx = eos_idx
self.in_features = in_features
self.regression = Dense(1, use_bias=bias, activation="sigmoid", name="regression")
def build(self, input_shape):
super().build(input_shape)
with tf.name_scope("regression"):
self.regression.build((None, self.in_features))
def call(self, tokens, attentions):
# remove eos token attentions
eos_mask = tf.cast(tokens != self.eos_idx, attentions.dtype)
eos_mask = tf.expand_dims(eos_mask, 1) * tf.expand_dims(eos_mask, 2)
attentions = attentions * eos_mask[:, None, None, :, :]
attentions = attentions[..., :-1, :-1]
# remove cls token attentions
attentions = attentions[..., 1:, 1:]
batch_size, layers, heads, seqlen, _ = shape_list(attentions)
attentions = tf.reshape(attentions, (batch_size, layers * heads, seqlen, seqlen))
# features: batch x channels x tokens x tokens (symmetric)
attentions = average_product_correct(symmetrize(attentions))
attentions = tf.transpose(attentions, perm=(0, 2, 3, 1))
return tf.squeeze(self.regression(attentions), 3)
class TFEsmEmbeddings(Layer):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
def __init__(self, config, name=None):
super().__init__(name=name)
self.word_embeddings = Embedding(
config.vocab_size,
config.hidden_size,
embeddings_initializer=get_initializer(config.initializer_range),
name="word_embeddings",
)
self.position_embeddings = Embedding(
config.max_position_embeddings,
config.hidden_size,
embeddings_initializer=get_initializer(config.initializer_range),
name="position_embeddings",
)
if config.emb_layer_norm_before:
self.layer_norm = LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
else:
self.layer_norm = None
# Matt: I think this line was copied incorrectly from BERT, disabling for now
# self.dropout = Dropout(config.hidden_dropout_prob)
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.position_ids = tf.range(config.max_position_embeddings)[None, :]
self.padding_idx = config.pad_token_id
self.token_dropout = config.token_dropout
self.mask_token_id = config.mask_token_id
self.config = config
def call(
self, input_ids=None, attention_mask=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if inputs_embeds is None:
# Note: tf.gather, on which the embedding layer is based, won't check positive out of bound
# indices on GPU, returning zeros instead. This is a dangerous silent behavior.
tf.debugging.assert_less(
input_ids,
tf.cast(self.config.vocab_size, dtype=input_ids.dtype),
message=(
"input_ids must be smaller than the embedding layer's input dimension (got"
f" {tf.math.reduce_max(input_ids)} >= {self.config.vocab_size})"
),
)
inputs_embeds = self.word_embeddings(input_ids)
# Note that if we want to support ESM-1 (not 1b!) in future then we need to support an
# embedding_scale factor here.
embeddings = inputs_embeds
# Matt: ESM has the option to handle masking in MLM in a slightly unusual way. If the token_dropout
# flag is False then it is handled in the same was as BERT/RoBERTa. If it is set to True, however,
# masked tokens are treated as if they were selected for input dropout and zeroed out.
# This "mask-dropout" is compensated for when masked tokens are not present, by scaling embeddings by
# a factor of (fraction of unmasked tokens during training) / (fraction of unmasked tokens in sample).
# This is analogous to the way that dropout layers scale down outputs during evaluation when not
# actually dropping out values (or, equivalently, scale up their un-dropped outputs in training).
if self.token_dropout:
embeddings = tf.where((input_ids == self.mask_token_id)[:, :, None], 0.0, embeddings)
mask_ratio_train = 0.15 * 0.8 # Hardcoded as the ratio used in all ESM model training runs
src_lengths = tf.cast(tf.reduce_sum(attention_mask, axis=-1), tf.float32)
masked_tokens = input_ids == self.mask_token_id
mask_ratio_observed = tf.math.count_nonzero(masked_tokens, dtype=tf.float32, axis=-1) / src_lengths
embeddings = embeddings * (1 - mask_ratio_train) / (1 - mask_ratio_observed)[:, None, None]
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
if self.layer_norm is not None:
embeddings = self.layer_norm(embeddings)
if attention_mask is not None:
embeddings = embeddings * tf.cast(tf.expand_dims(attention_mask, -1), embeddings.dtype)
# Matt: I think this line was copied incorrectly from BERT, disabling it for now.
# embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: tf.Tensor
Returns: tf.Tensor
"""
input_shape = shape_list(inputs_embeds)[:-1]
sequence_length = input_shape[1]
position_ids = tf.range(
start=self.padding_idx + 1, limit=sequence_length + self.padding_idx + 1, dtype=tf.int64
)
return tf.broadcast_to(tf.expand_dims(position_ids, 0), input_shape)
class TFEsmSelfAttention(Layer):
def __init__(self, config, position_embedding_type=None, name=None):
super().__init__(name=name)
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = Dense(self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key")
self.value = Dense(
self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
self.rotary_embeddings = None
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = Embedding(
2 * config.max_position_embeddings - 1,
self.attention_head_size,
embeddings_initializer=get_initializer(config.initializer_range),
)
elif self.position_embedding_type == "rotary":
self.rotary_embeddings = TFRotaryEmbedding(dim=self.attention_head_size, name="rotary_embeddings")
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: tf.Tensor) -> tf.Tensor:
new_x_shape = shape_list(x)[:-1] + [self.num_attention_heads, self.attention_head_size]
x = tf.reshape(x, new_x_shape)
return tf.transpose(x, perm=(0, 2, 1, 3))
def call(
self,
hidden_states: tf.Tensor,
attention_mask: Optional[tf.Tensor] = None,
head_mask: Optional[tf.Tensor] = None,
encoder_hidden_states: Optional[tf.Tensor] = None,
encoder_attention_mask: Optional[tf.Tensor] = None,
past_key_value: Optional[Tuple[Tuple[tf.Tensor]]] = None,
output_attentions: Optional[bool] = False,
training: bool = False,
) -> Tuple[tf.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = tf.concat([past_key_value[0], key_layer], axis=2)
value_layer = tf.concat([past_key_value[1], value_layer], axis=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Matt: Our BERT model (which this code was derived from) scales attention logits down by sqrt(head_dim).
# ESM scales the query down by the same factor instead. Modulo numerical stability these are equivalent,
# but not when rotary embeddings get involved. Therefore, we scale the query here to match the original
# ESM code and fix rotary embeddings.
query_layer = query_layer * self.attention_head_size**-0.5
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
if self.position_embedding_type == "rotary":
query_layer, key_layer = self.rotary_embeddings(query_layer, key_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
seq_length = shape_list(hidden_states)[1]
position_ids_l = tf.expand_dims(tf.range(seq_length, dtype=tf.int64), -1)
position_ids_r = tf.expand_dims(tf.range(seq_length, dtype=tf.int64), 0)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = tf.cast(positional_embedding, query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = tf.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = tf.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = tf.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in EsmModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = attention_probs @ value_layer
context_layer = tf.transpose(context_layer, perm=(0, 2, 1, 3))
new_context_layer_shape = shape_list(context_layer)[:-2] + [self.all_head_size]
context_layer = tf.reshape(context_layer, new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class TFEsmSelfOutput(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states += input_tensor
return hidden_states
class TFEsmAttention(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.self = TFEsmSelfAttention(config, name="self")
self.output_layer = TFEsmSelfOutput(config, name="output")
self.pruned_heads = set()
self.LayerNorm = LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
training=False,
):
hidden_states_ln = self.LayerNorm(hidden_states)
self_outputs = self.self(
hidden_states_ln,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
training,
)
attention_output = self.output_layer(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_tf_bert.TFBertIntermediate with Bert->Esm
class TFEsmIntermediate(tf.keras.layers.Layer):
def __init__(self, config: EsmConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.intermediate_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
class TFEsmOutput(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = Dropout(config.hidden_dropout_prob)
def call(self, hidden_states, input_tensor, training=False):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states += input_tensor
return hidden_states
class TFEsmLayer(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = TFEsmAttention(config, name="attention")
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise RuntimeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = TFEsmAttention(config)
self.intermediate = TFEsmIntermediate(config, name="intermediate")
self.output_layer = TFEsmOutput(config, name="output")
self.LayerNorm = LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
training=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
training=training,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise AttributeError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated"
" with cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
training=training,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layernorm_output = self.LayerNorm(attention_output)
intermediate_output = self.intermediate(hidden_states=layernorm_output)
layer_output = self.output_layer(
hidden_states=intermediate_output, input_tensor=attention_output, training=training
)
outputs = (layer_output,) + outputs # add attentions if we output them
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
class TFEsmEncoder(Layer):
def __init__(self, config, name=None):
super().__init__(name=name)
self.config = config
self.layer = [TFEsmLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
self.emb_layer_norm_after = LayerNormalization(epsilon=config.layer_norm_eps, name="emb_layer_norm_after")
def call(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
return_dict=True,
training=False,
):
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
training,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if self.emb_layer_norm_after:
hidden_states = self.emb_layer_norm_after(hidden_states)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return TFBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertPooler with Bert->Esm
class TFEsmPooler(Layer):
def __init__(self, config: EsmConfig, **kwargs):
super().__init__(**kwargs)
self.dense = tf.keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(inputs=first_token_tensor)
return pooled_output
class TFEsmPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = EsmConfig
base_model_prefix = "esm"
ESM_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a Keras [Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it as a
regular Keras model and refer to the TF/Keras documentation for all matters related to general usage and behavior.
Parameters:
config ([`EsmConfig`]): Model configuration class with all the parameters of the
model. Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~TFPreTrainedModel.from_pretrained`] method to load the model weights.
"""
ESM_INPUTS_DOCSTRING = r"""
Args:
input_ids (`tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`tf.Tensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`tf.Tensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`tf.Tensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class TFEsmMainLayer(Layer):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config, add_pooling_layer=True, name=None, **kwargs):
super().__init__(name=name, **kwargs)
self.config = config
self.is_decoder = config.is_decoder
self.embeddings = TFEsmEmbeddings(config, name="embeddings")
self.encoder = TFEsmEncoder(config, name="encoder")
self.pooler = TFEsmPooler(config, name="pooler") if add_pooling_layer else None
self.contact_head = TFEsmContactPredictionHead(
in_features=self.config.num_hidden_layers * self.config.num_attention_heads, bias=True, name="contact_head"
)
def build(self, input_shape):
super().build(input_shape)
with tf.name_scope("contact_head"):
self.contact_head.build(input_shape)
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value: tf.Variable):
self.embeddings.word_embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
raise NotImplementedError
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
encoder_hidden_states: Optional[Union[np.ndarray, tf.Tensor]] = None,
encoder_attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPoolingAndCrossAttentions, Tuple[tf.Tensor]]:
if not self.config.is_decoder:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
if past_key_values is None:
past_key_values_length = 0
past_key_values = [None] * len(self.encoder.layer)
else:
past_key_values_length = shape_list(past_key_values[0][0])[-2]
if attention_mask is None:
attention_mask = tf.fill(dims=(batch_size, seq_length + past_key_values_length), value=1)
embedding_output = self.embeddings(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
training=training,
)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
attention_mask_shape = shape_list(attention_mask)
mask_seq_length = seq_length + past_key_values_length
# Copied from `modeling_tf_t5.py`
# Provided a padding mask of dimensions [batch_size, mask_seq_length]
# - if the model is a decoder, apply a causal mask in addition to the padding mask
# - if the model is an encoder, make the mask broadcastable to [batch_size, num_heads, mask_seq_length, mask_seq_length]
if self.is_decoder:
seq_ids = tf.range(mask_seq_length)
causal_mask = tf.less_equal(
tf.tile(seq_ids[None, None, :], (batch_size, mask_seq_length, 1)),
seq_ids[None, :, None],
)
causal_mask = tf.cast(causal_mask, dtype=attention_mask.dtype)
extended_attention_mask = causal_mask * attention_mask[:, None, :]
attention_mask_shape = shape_list(extended_attention_mask)
extended_attention_mask = tf.reshape(
extended_attention_mask, (attention_mask_shape[0], 1, attention_mask_shape[1], attention_mask_shape[2])
)
if past_key_values[0] is not None:
# attention_mask needs to be sliced to the shape `[batch_size, 1, from_seq_length - cached_seq_length, to_seq_length]
extended_attention_mask = extended_attention_mask[:, :, -seq_length:, :]
else:
extended_attention_mask = tf.reshape(
attention_mask, (attention_mask_shape[0], 1, 1, attention_mask_shape[1])
)
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Copied from `modeling_tf_t5.py` with -1e9 -> -10000
if self.is_decoder and encoder_attention_mask is not None:
# If a 2D ou 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, mask_seq_length, mask_seq_length]
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
encoder_attention_mask = tf.cast(encoder_attention_mask, dtype=extended_attention_mask.dtype)
num_dims_encoder_attention_mask = len(shape_list(encoder_attention_mask))
if num_dims_encoder_attention_mask == 3:
encoder_extended_attention_mask = encoder_attention_mask[:, None, :, :]
if num_dims_encoder_attention_mask == 2:
encoder_extended_attention_mask = encoder_attention_mask[:, None, None, :]
# T5 has a mask that can compare sequence ids, we can simulate this here with this transposition
# Cf. https://github.com/tensorflow/mesh/blob/8d2465e9bc93129b913b5ccc6a59aa97abd96ec6/mesh_tensorflow/transformer/transformer_layers.py#L270
# encoder_extended_attention_mask = tf.math.equal(encoder_extended_attention_mask,
# tf.transpose(encoder_extended_attention_mask, perm=(-1, -2)))
encoder_extended_attention_mask = (1.0 - encoder_extended_attention_mask) * -10000.0
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.config.num_hidden_layers
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(hidden_states=sequence_output) if self.pooler is not None else None
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
def predict_contacts(self, tokens, attention_mask):
attns = self(tokens, attention_mask=attention_mask, return_dict=True, output_attentions=True).attentions
attns = tf.stack(attns, axis=1) # Matches the original model layout
# In the original model, attentions for padding tokens are completely zeroed out.
# This makes no difference most of the time because the other tokens won't attend to them,
# but it does for the contact prediction task, which takes attentions as input,
# so we have to mimic that here.
attention_mask = tf.cast(attention_mask, attns.dtype)
attns *= attention_mask[:, None, None, None]
attns *= attention_mask[:, None, None, :, None]
return self.contact_head(tokens, attns)
@add_start_docstrings(
"The bare ESM Model transformer outputting raw hidden-states without any specific head on top.",
ESM_START_DOCSTRING,
)
class TFEsmModel(TFEsmPreTrainedModel):
def __init__(self, config: EsmConfig, add_pooling_layer=True, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.esm = TFEsmMainLayer(config, add_pooling_layer=add_pooling_layer, name="esm")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
encoder_hidden_states: Optional[Union[np.ndarray, tf.Tensor]] = None,
encoder_attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPoolingAndCrossAttentions, Tuple[tf.Tensor]]:
r"""
encoder_hidden_states (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers`)
contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*, defaults to `True`):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`). Set to `False` during training, `True` during generation
"""
outputs = self.esm(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
@tf.function(
input_signature=[
{
"input_ids": tf.TensorSpec((None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None), tf.int32, name="attention_mask"),
}
]
)
def serving(self, inputs):
output = self.call(inputs)
return self.serving_output(output)
def serving_output(
self, output: TFBaseModelOutputWithPoolingAndCrossAttentions
) -> TFBaseModelOutputWithPoolingAndCrossAttentions:
output_cache = self.config.use_cache and self.config.is_decoder
pkv = tf.convert_to_tensor(output.past_key_values) if output_cache else None
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
cross_attns = tf.convert_to_tensor(output.cross_attentions) if output.cross_attentions is not None else None
if not (self.config.output_attentions and self.config.add_cross_attention):
cross_attns = None
return TFBaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=output.last_hidden_state,
pooler_output=output.pooler_output,
past_key_values=pkv,
hidden_states=hs,
attentions=attns,
cross_attentions=cross_attns,
)
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask)
@add_start_docstrings("""ESM Model with a `language modeling` head on top.""", ESM_START_DOCSTRING)
class TFEsmForMaskedLM(TFEsmPreTrainedModel, TFMaskedLanguageModelingLoss):
_keys_to_ignore_on_load_missing = [r"position_ids"]
_keys_to_ignore_on_load_unexpected = [r"pooler"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `EsmForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.lm_head = TFEsmLMHead(config, name="lm_head")
def get_output_embeddings(self):
return self.lm_head.decoder
def set_output_embeddings(self, new_embeddings):
self.lm_head.decoder = new_embeddings
def get_lm_head(self):
return self.lm_head
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFMaskedLMOutput,
config_class=_CONFIG_FOR_DOC,
mask="<mask>",
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
encoder_hidden_states: Optional[Union[np.ndarray, tf.Tensor]] = None,
encoder_attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFMaskedLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
masked_lm_loss = None
if labels is not None:
masked_lm_loss = self.hf_compute_loss(labels=labels, logits=prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return TFMaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForMaskedLM.serving_output
def serving_output(self, output: TFMaskedLMOutput) -> TFMaskedLMOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFMaskedLMOutput(logits=output.logits, hidden_states=hs, attentions=attns)
@tf.function(
input_signature=[
{
"input_ids": tf.TensorSpec((None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None), tf.int32, name="attention_mask"),
}
]
)
def serving(self, inputs):
output = self.call(inputs)
return self.serving_output(output)
def predict_contacts(self, tokens, attention_mask):
return self.esm.predict_contacts(tokens, attention_mask)
class TFEsmLMHead(Layer):
"""ESM Head for masked language modeling."""
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.layer_norm = LayerNormalization(epsilon=config.layer_norm_eps, name="layer_norm")
self.decoder = Dense(
config.vocab_size,
use_bias=False,
kernel_initializer=get_initializer(config.initializer_range),
name="decoder",
)
self.config = config
def build(self, input_shape):
super().build(input_shape)
# Separate bias to match the PT model and allow weight cross-loading to work
# Put it in the build so it gets the right name when adding it as a weight
self.bias = self.add_weight("bias", shape=(self.config.vocab_size,), initializer="zeros", trainable=True)
def get_bias(self):
return {"bias": self.bias}
def call(self, features):
x = self.dense(features)
x = gelu(x)
x = self.layer_norm(x)
# project back to size of vocabulary with bias
x = self.decoder(x)
x = x + self.bias
return x
@add_start_docstrings(
"""
ESM Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
output) e.g. for GLUE tasks.
""",
ESM_START_DOCSTRING,
)
class TFEsmForSequenceClassification(TFEsmPreTrainedModel, TFSequenceClassificationLoss):
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.classifier = TFEsmClassificationHead(config, name="classifier")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFSequenceClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForSequenceClassification.serving_output
def serving_output(self, output: TFSequenceClassifierOutput) -> TFSequenceClassifierOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFSequenceClassifierOutput(logits=output.logits, hidden_states=hs, attentions=attns)
@tf.function(
input_signature=[
{
"input_ids": tf.TensorSpec((None, None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None, None), tf.int32, name="attention_mask"),
}
]
)
def serving(self, inputs):
output = self.call(inputs)
return self.serving_output(output)
@add_start_docstrings(
"""
ESM Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
ESM_START_DOCSTRING,
)
class TFEsmForTokenClassification(TFEsmPreTrainedModel, TFTokenClassificationLoss):
_keys_to_ignore_on_load_unexpected = [r"pooler"]
_keys_to_ignore_on_load_missing = [r"position_ids"]
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.esm = TFEsmMainLayer(config, add_pooling_layer=False, name="esm")
self.dropout = Dropout(config.hidden_dropout_prob)
self.classifier = Dense(config.num_labels, name="classifier")
@unpack_inputs
@add_start_docstrings_to_model_forward(ESM_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFTokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFTokenClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.esm(
input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output, training=training)
logits = self.classifier(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels, logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFTokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
# Copied from transformers.models.bert.modeling_tf_bert.TFBertForTokenClassification.serving_output
def serving_output(self, output: TFTokenClassifierOutput) -> TFTokenClassifierOutput:
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFTokenClassifierOutput(logits=output.logits, hidden_states=hs, attentions=attns)
@tf.function(
input_signature=[
{
"input_ids": tf.TensorSpec((None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None), tf.int32, name="attention_mask"),
}
]
)
def serving(self, inputs):
output = self.call(inputs)
return self.serving_output(output)
class TFEsmClassificationHead(Layer):
"""Head for sentence-level classification tasks."""
def __init__(self, config, name=None):
super().__init__(name=name)
self.dense = Dense(
config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
self.dropout = Dropout(config.hidden_dropout_prob)
self.out_proj = Dense(
config.num_labels,
kernel_initializer=get_initializer(config.initializer_range),
activation="linear",
name="out_proj",
)
def call(self, features, training=False):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x, training=training)
x = self.dense(x)
x = self.dropout(x, training=training)
x = self.out_proj(x)
return x
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: tf.Tensor x:
Returns: tf.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = tf.cast(input_ids != padding_idx, tf.int64)
incremental_indices = (tf.cumsum(mask, axis=1) + past_key_values_length) * mask
return incremental_indices + padding_idx
|
27182812/ChatGLM-LLaMA-chinese-insturct | 18,458 | src/transformers/models/esm/convert_esm.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert ESM checkpoint."""
import argparse
import pathlib
from pathlib import Path
from tempfile import TemporaryDirectory
import esm as esm_module
import torch
from esm.esmfold.v1.misc import batch_encode_sequences as esmfold_encode_sequences
from esm.esmfold.v1.pretrained import esmfold_v1
from transformers.models.esm.configuration_esm import EsmConfig, EsmFoldConfig
from transformers.models.esm.modeling_esm import (
EsmForMaskedLM,
EsmForSequenceClassification,
EsmIntermediate,
EsmLayer,
EsmOutput,
EsmSelfAttention,
EsmSelfOutput,
)
from transformers.models.esm.modeling_esmfold import EsmForProteinFolding
from transformers.models.esm.tokenization_esm import EsmTokenizer
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
SAMPLE_DATA = [
(
"protein1",
"MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA",
),
("protein2", "MKTVRQERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPRGYVLA"),
("protein3", "MKTVRQERLKSI<mask>RILERSKEPVSGAQLAEELS<mask>SRQVIVQDIAYLRSLGYN<mask>VATPRGYVLAGG"),
("protein4", "MKTVRQERLKSI<mask>RILERSKEPVSGAQLAEELS<mask>SRQVIVQDIAYLRSLGYN<mask>VATPRGYVLA"),
]
MODEL_MAPPING = {
"esm1b_t33_650M_UR50S": esm_module.pretrained.esm1b_t33_650M_UR50S,
"esm1v_t33_650M_UR90S_1": esm_module.pretrained.esm1v_t33_650M_UR90S_1,
"esm1v_t33_650M_UR90S_2": esm_module.pretrained.esm1v_t33_650M_UR90S_2,
"esm1v_t33_650M_UR90S_3": esm_module.pretrained.esm1v_t33_650M_UR90S_3,
"esm1v_t33_650M_UR90S_4": esm_module.pretrained.esm1v_t33_650M_UR90S_4,
"esm1v_t33_650M_UR90S_5": esm_module.pretrained.esm1v_t33_650M_UR90S_5,
"esm2_t48_15B_UR50D": esm_module.pretrained.esm2_t48_15B_UR50D,
"esm2_t36_3B_UR50D": esm_module.pretrained.esm2_t36_3B_UR50D,
"esm2_t33_650M_UR50D": esm_module.pretrained.esm2_t33_650M_UR50D,
"esm2_t30_150M_UR50D": esm_module.pretrained.esm2_t30_150M_UR50D,
"esm2_t12_35M_UR50D": esm_module.pretrained.esm2_t12_35M_UR50D,
"esm2_t6_8M_UR50D": esm_module.pretrained.esm2_t6_8M_UR50D,
"esmfold_v1": esmfold_v1,
}
restypes = list("ARNDCQEGHILKMFPSTWYV")
restypes_with_x = restypes + ["X"]
restypes_with_extras = restypes_with_x + ["<pad>", "<mask>", "<cls>", "<sep>", "<eos>"]
def get_esmfold_tokenizer():
with TemporaryDirectory() as tempdir:
vocab = "\n".join(restypes_with_extras)
vocab_file = Path(tempdir) / "vocab.txt"
vocab_file.write_text(vocab)
hf_tokenizer = EsmTokenizer(vocab_file=str(vocab_file))
hf_tokenizer.pad_token_id = 0 # Overlaps with 'A' but that seems to be what they want
return hf_tokenizer
def transfer_and_check_weights(original_module, our_module):
status = our_module.load_state_dict(original_module.state_dict())
if status.missing_keys:
raise ValueError(f"Missing keys: {status.missing_keys}")
if status.unexpected_keys:
raise ValueError(f"Unexpected keys: {status.unexpected_keys}")
def convert_esm_checkpoint_to_pytorch(
model: str, pytorch_dump_folder_path: str, classification_head: bool, push_to_repo: str, auth_token: str
):
"""
Copy/paste/tweak esm's weights to our BERT structure.
"""
if model.startswith("esmfold"):
esm = MODEL_MAPPING[model]()
else:
esm, alphabet = MODEL_MAPPING[model]()
esm.eval() # disable dropout
if model.startswith("esmfold"):
embed_dim = esm.esm.embed_dim
num_layers = esm.esm.num_layers
num_attention_heads = esm.esm.attention_heads
intermediate_size = 4 * embed_dim
token_dropout = esm.esm.token_dropout
emb_layer_norm_before = False # This code path does not exist in ESM-2
position_embedding_type = "rotary"
is_folding_model = True
esmfold_config = EsmFoldConfig()
for key, val in esm.cfg.items():
if hasattr(esmfold_config, key) and key != "trunk":
setattr(esmfold_config, key, val)
for key, val in esm.cfg.trunk.items():
if hasattr(esmfold_config.trunk, key) and key != "structure_module":
setattr(esmfold_config.trunk, key, val)
for key, val in esm.cfg.trunk.structure_module.items():
if hasattr(esmfold_config.trunk.structure_module, key):
setattr(esmfold_config.trunk.structure_module, key, val)
elif hasattr(esm, "args"):
# Indicates an ESM-1b or ESM-1v model
embed_dim = esm.args.embed_dim
num_layers = esm.args.layers
num_attention_heads = esm.args.attention_heads
intermediate_size = esm.args.ffn_embed_dim
token_dropout = esm.args.token_dropout
emb_layer_norm_before = True if esm.emb_layer_norm_before else False
position_embedding_type = "absolute"
is_folding_model = False
esmfold_config = None
else:
# Indicates an ESM-2 model
embed_dim = esm.embed_dim
num_layers = esm.num_layers
num_attention_heads = esm.attention_heads
intermediate_size = 4 * embed_dim # This is hardcoded in ESM-2
token_dropout = esm.token_dropout
emb_layer_norm_before = False # This code path does not exist in ESM-2
position_embedding_type = "rotary"
is_folding_model = False
esmfold_config = None
if is_folding_model:
alphabet = esm.esm.alphabet
vocab_list = tuple(alphabet.all_toks)
mask_token_id = alphabet.mask_idx
pad_token_id = alphabet.padding_idx
if is_folding_model:
original_esm_model = esm.esm
else:
original_esm_model = esm
config = EsmConfig(
vocab_size=original_esm_model.embed_tokens.num_embeddings,
mask_token_id=mask_token_id,
hidden_size=embed_dim,
num_hidden_layers=num_layers,
num_attention_heads=num_attention_heads,
intermediate_size=intermediate_size,
max_position_embeddings=1026,
layer_norm_eps=1e-5, # PyTorch default used in fairseq
attention_probs_dropout_prob=0.0,
hidden_dropout_prob=0.0,
pad_token_id=pad_token_id,
emb_layer_norm_before=emb_layer_norm_before,
token_dropout=token_dropout,
position_embedding_type=position_embedding_type,
is_folding_model=is_folding_model,
esmfold_config=esmfold_config,
vocab_list=vocab_list,
)
if classification_head:
config.num_labels = esm.classification_heads["mnli"].out_proj.weight.shape[0]
print("Our ESM config:", config)
if model.startswith("esmfold"):
model_class = EsmForProteinFolding
elif classification_head:
model_class = EsmForSequenceClassification
else:
model_class = EsmForMaskedLM
model = model_class(config)
model.eval()
# Now let's copy all the weights.
# Embeddings
model.esm.embeddings.word_embeddings.weight = original_esm_model.embed_tokens.weight
if position_embedding_type == "absolute":
model.esm.embeddings.position_embeddings.weight = original_esm_model.embed_positions.weight
if config.emb_layer_norm_before:
model.esm.embeddings.layer_norm.weight = original_esm_model.emb_layer_norm_before.weight
model.esm.embeddings.layer_norm.bias = original_esm_model.emb_layer_norm_before.bias
model.esm.encoder.emb_layer_norm_after.weight = original_esm_model.emb_layer_norm_after.weight
model.esm.encoder.emb_layer_norm_after.bias = original_esm_model.emb_layer_norm_after.bias
for i in range(config.num_hidden_layers):
# Encoder: start of layer
layer: EsmLayer = model.esm.encoder.layer[i]
# esm_layer: TransformerSentenceEncoderLayer = original_esm_model.layers[i]
esm_layer = original_esm_model.layers[i]
# self attention
self_attn: EsmSelfAttention = layer.attention.self
assert (
esm_layer.self_attn.k_proj.weight.data.shape
== esm_layer.self_attn.q_proj.weight.data.shape
== esm_layer.self_attn.v_proj.weight.data.shape
== torch.Size((config.hidden_size, config.hidden_size))
)
self_attn.query.weight.data = esm_layer.self_attn.q_proj.weight
self_attn.query.bias.data = esm_layer.self_attn.q_proj.bias
self_attn.key.weight.data = esm_layer.self_attn.k_proj.weight
self_attn.key.bias.data = esm_layer.self_attn.k_proj.bias
self_attn.value.weight.data = esm_layer.self_attn.v_proj.weight
self_attn.value.bias.data = esm_layer.self_attn.v_proj.bias
if getattr(esm_layer.self_attn, "rot_emb", None) is not None:
# Matt: Although inv_freq is not a trainable weight, it is computed at model init and cached.
# During the training of ESM-2 the model was converted to float16 precision, which also converts
# the inv_freq tensor, and the loss of precision remains even if the model is loaded later as float32.
# If we recompute inv_freq without this loss of precision then we will get subtly different rotary
# embeddings, which are enough to cause significant discrepancies in model outputs. To avoid this,
# we make sure the new model copies the data from the old inv_freq.
self_attn.rotary_embeddings.inv_freq.data = esm_layer.self_attn.rot_emb.inv_freq
# LayerNorm changes for pre-activation
layer.attention.LayerNorm.weight = esm_layer.self_attn_layer_norm.weight
layer.attention.LayerNorm.bias = esm_layer.self_attn_layer_norm.bias
layer.LayerNorm.weight = esm_layer.final_layer_norm.weight
layer.LayerNorm.bias = esm_layer.final_layer_norm.bias
# self-attention output
self_output: EsmSelfOutput = layer.attention.output
assert self_output.dense.weight.shape == esm_layer.self_attn.out_proj.weight.shape
self_output.dense.weight = esm_layer.self_attn.out_proj.weight
self_output.dense.bias = esm_layer.self_attn.out_proj.bias
# intermediate
intermediate: EsmIntermediate = layer.intermediate
assert intermediate.dense.weight.shape == esm_layer.fc1.weight.shape
intermediate.dense.weight = esm_layer.fc1.weight
intermediate.dense.bias = esm_layer.fc1.bias
# output
bert_output: EsmOutput = layer.output
assert bert_output.dense.weight.shape == esm_layer.fc2.weight.shape
bert_output.dense.weight = esm_layer.fc2.weight
bert_output.dense.bias = esm_layer.fc2.bias
# end of layer
if is_folding_model:
model.esm_s_combine.data = esm.esm_s_combine.data
model.af2_to_esm.data = esm.af2_to_esm.data
transfer_and_check_weights(esm.embedding, model.embedding)
transfer_and_check_weights(esm.esm_s_mlp, model.esm_s_mlp)
transfer_and_check_weights(esm.trunk, model.trunk)
transfer_and_check_weights(esm.distogram_head, model.distogram_head)
transfer_and_check_weights(esm.ptm_head, model.ptm_head)
transfer_and_check_weights(esm.lm_head, model.lm_head)
transfer_and_check_weights(esm.lddt_head, model.lddt_head)
elif classification_head:
model.classifier.dense.weight = esm.esm.classification_heads["mnli"].dense.weight
model.classifier.dense.bias = esm.classification_heads["mnli"].dense.bias
model.classifier.out_proj.weight = esm.classification_heads["mnli"].out_proj.weight
model.classifier.out_proj.bias = esm.classification_heads["mnli"].out_proj.bias
else:
# LM Head
model.lm_head.dense.weight = esm.lm_head.dense.weight
model.lm_head.dense.bias = esm.lm_head.dense.bias
model.lm_head.layer_norm.weight = esm.lm_head.layer_norm.weight
model.lm_head.layer_norm.bias = esm.lm_head.layer_norm.bias
model.lm_head.decoder.weight = esm.lm_head.weight
model.lm_head.bias = esm.lm_head.bias
# Contact prediction head
transfer_and_check_weights(esm.contact_head, model.esm.contact_head)
# Prepare data (first 2 sequences from ESMStructuralSplitDataset superfamily / 4)
if is_folding_model:
# Folding models aren't trained on masked inputs and don't like mask tokens.
sample_data = SAMPLE_DATA[:2]
else:
sample_data = SAMPLE_DATA
if is_folding_model:
hf_tokenizer = get_esmfold_tokenizer()
hf_tokens = hf_tokenizer(
[row[1] for row in sample_data], return_tensors="pt", padding=True, add_special_tokens=False
)
esmfold_aas, esmfold_mask, _, _, _ = esmfold_encode_sequences([row[1] for row in sample_data])
success = torch.all(hf_tokens["input_ids"] == esmfold_aas) and torch.all(
hf_tokens["attention_mask"] == esmfold_mask
)
else:
# Let's check that we get the same results.
batch_converter = alphabet.get_batch_converter()
batch_labels, batch_strs, batch_tokens = batch_converter(sample_data)
# Prepare tokenizer and make sure it matches
with TemporaryDirectory() as tempdir:
vocab = "\n".join(alphabet.all_toks)
vocab_file = Path(tempdir) / "vocab.txt"
vocab_file.write_text(vocab)
hf_tokenizer = EsmTokenizer(vocab_file=str(vocab_file))
hf_tokens = hf_tokenizer([row[1] for row in sample_data], return_tensors="pt", padding=True)
success = torch.all(hf_tokens["input_ids"] == batch_tokens)
print("Do both models tokenizers output the same tokens?", "🔥" if success else "💩")
if not success:
raise Exception("Tokenization does not match!")
with torch.no_grad():
if is_folding_model:
# Let's test the model in parts
# ESMFold always converts the ESM stem to float16, which requires float16 ops
# that don't exist on CPU. Therefore, to test it we need to run it on GPU. However,
# ESMFold is what we in the community call a "big boy" and so we desperately avoid putting both the
# original and the converted model on the GPU at the same time.
their_output = esm.cuda().infer([row[1] for row in sample_data])
our_output = model.cuda()(
input_ids=hf_tokens["input_ids"].cuda(), attention_mask=hf_tokens["attention_mask"].cuda()
)
else:
our_output = model(**hf_tokens, output_hidden_states=True)
our_output = our_output["logits"]
if classification_head:
their_output = esm.model.classification_heads["mnli"](esm.extract_features(batch_tokens))
else:
their_output = esm(hf_tokens["input_ids"], repr_layers=list(range(999)))
their_output = their_output["logits"]
if is_folding_model:
max_absolute_diff = torch.max(torch.abs(our_output["positions"] - their_output["positions"])).item()
success = torch.allclose(our_output["positions"], their_output["positions"], atol=1e-5)
else:
max_absolute_diff = torch.max(torch.abs(our_output - their_output)).item()
success = torch.allclose(our_output, their_output, atol=1e-5)
print(f"max_absolute_diff = {max_absolute_diff}") # ~ 1e-5
print("Do both models output the same tensors?", "🔥" if success else "💩")
if not success:
raise Exception("Something went wRoNg")
if not is_folding_model:
# Let's check contact prediction too
our_output = model.predict_contacts(hf_tokens["input_ids"], hf_tokens["attention_mask"])
their_output = esm.predict_contacts(hf_tokens["input_ids"])
max_absolute_diff = torch.max(torch.abs(our_output - their_output)).item()
success = torch.allclose(our_output, their_output, atol=1e-5)
print("Contact prediction testing:")
print(f"max_absolute_diff = {max_absolute_diff}") # ~ 1e-5
print("Do both models output the same tensors?", "🔥" if success else "💩")
if not success:
raise Exception("Something went wRoNg")
pathlib.Path(pytorch_dump_folder_path).mkdir(parents=True, exist_ok=True)
print(f"Saving model to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
del esm # Free up some memory before continuing
print(f"Saving tokenizer to {pytorch_dump_folder_path}")
hf_tokenizer.save_pretrained(pytorch_dump_folder_path)
if push_to_repo:
model.push_to_hub(repo_id=push_to_repo, use_auth_token=auth_token)
hf_tokenizer.push_to_hub(repo_id=push_to_repo, use_auth_token=auth_token)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--pytorch_dump_folder_path", type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--classification_head", action="store_true", help="Whether to convert a final classification head."
)
parser.add_argument("--model", default=None, type=str, required=True, help="Name of model to convert.")
parser.add_argument("--push_to_repo", type=str, help="Repo to upload to (including username!).")
parser.add_argument("--auth_token", type=str, help="HuggingFace auth token.")
args = parser.parse_args()
convert_esm_checkpoint_to_pytorch(
args.model, args.pytorch_dump_folder_path, args.classification_head, args.push_to_repo, args.auth_token
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 14,558 | src/transformers/models/esm/configuration_esm.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" ESM model configuration"""
from dataclasses import asdict, dataclass
from typing import Optional
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
# TODO Update this
ESM_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/esm-1b": "https://huggingface.co/facebook/esm-1b/resolve/main/config.json",
# See all ESM models at https://huggingface.co/models?filter=esm
}
class EsmConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`ESMModel`]. It is used to instantiate a ESM model
according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the ESM
[facebook/esm-1b](https://huggingface.co/facebook/esm-1b) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*):
Vocabulary size of the ESM model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`ESMModel`].
mask_token_id (`int`, *optional*):
The index of the mask token in the vocabulary. This must be included in the config because of the
"mask-dropout" scaling trick, which will scale the inputs depending on the number of masked tokens.
pad_token_id (`int`, *optional*):
The index of the padding token in the vocabulary. This must be included in the config because certain parts
of the ESM code use this instead of the attention mask.
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 1026):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
position_embedding_type (`str`, *optional*, defaults to `"absolute"`):
Type of position embedding. Choose one of `"absolute"`, `"relative_key"`, `"relative_key_query", "rotary"`.
For positional embeddings use `"absolute"`. For more information on `"relative_key"`, please refer to
[Self-Attention with Relative Position Representations (Shaw et al.)](https://arxiv.org/abs/1803.02155).
For more information on `"relative_key_query"`, please refer to *Method 4* in [Improve Transformer Models
with Better Relative Position Embeddings (Huang et al.)](https://arxiv.org/abs/2009.13658).
is_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as a decoder or not. If `False`, the model is used as an encoder.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
emb_layer_norm_before (`bool`, *optional*):
Whether to apply layer normalization after embeddings but before the main stem of the network.
token_dropout (`bool`, defaults to `False`):
When this is enabled, masked tokens are treated as if they had been dropped out by input dropout.
Examples:
```python
>>> from transformers import EsmModel, EsmConfig
>>> # Initializing a ESM facebook/esm-1b style configuration >>> configuration = EsmConfig()
>>> # Initializing a model from the configuration >>> model = ESMModel(configuration)
>>> # Accessing the model configuration >>> configuration = model.config
```"""
model_type = "esm"
def __init__(
self,
vocab_size=None,
mask_token_id=None,
pad_token_id=None,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=1026,
initializer_range=0.02,
layer_norm_eps=1e-12,
position_embedding_type="absolute",
use_cache=True,
emb_layer_norm_before=None,
token_dropout=False,
is_folding_model=False,
esmfold_config=None,
vocab_list=None,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, mask_token_id=mask_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.position_embedding_type = position_embedding_type
self.use_cache = use_cache
self.emb_layer_norm_before = emb_layer_norm_before
self.token_dropout = token_dropout
self.is_folding_model = is_folding_model
if is_folding_model:
if esmfold_config is None:
logger.info("No esmfold_config supplied for folding model, using default values.")
esmfold_config = EsmFoldConfig()
elif isinstance(esmfold_config, dict):
esmfold_config = EsmFoldConfig(**esmfold_config)
self.esmfold_config = esmfold_config
if vocab_list is None:
logger.warning("No vocab_list supplied for folding model, assuming the ESM-2 vocabulary!")
self.vocab_list = get_default_vocab_list()
else:
self.vocab_list = vocab_list
else:
self.esmfold_config = None
self.vocab_list = None
if self.esmfold_config is not None and getattr(self.esmfold_config, "use_esm_attn_map", False):
raise ValueError("The HuggingFace port of ESMFold does not support use_esm_attn_map at this time!")
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = super().to_dict()
if isinstance(self.esmfold_config, EsmFoldConfig):
output["esmfold_config"] = self.esmfold_config.to_dict()
return output
@dataclass
class EsmFoldConfig:
esm_type: str = None
fp16_esm: bool = True
use_esm_attn_map: bool = False
esm_ablate_pairwise: bool = False
esm_ablate_sequence: bool = False
esm_input_dropout: float = 0
embed_aa: bool = True
bypass_lm: bool = False
lddt_head_hid_dim: int = 128
trunk: "TrunkConfig" = None
def __post_init__(self):
if self.trunk is None:
self.trunk = TrunkConfig()
elif isinstance(self.trunk, dict):
self.trunk = TrunkConfig(**self.trunk)
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = asdict(self)
output["trunk"] = self.trunk.to_dict()
return output
@dataclass
class TrunkConfig:
num_blocks: int = 48
sequence_state_dim: int = 1024
pairwise_state_dim: int = 128
sequence_head_width: int = 32
pairwise_head_width: int = 32
position_bins: int = 32
dropout: float = 0
layer_drop: float = 0
cpu_grad_checkpoint: bool = False
max_recycles: int = 4
chunk_size: Optional[int] = 128
structure_module: "StructureModuleConfig" = None
def __post_init__(self):
if self.structure_module is None:
self.structure_module = StructureModuleConfig()
elif isinstance(self.structure_module, dict):
self.structure_module = StructureModuleConfig(**self.structure_module)
if self.max_recycles <= 0:
raise ValueError(f"`max_recycles` should be positive, got {self.max_recycles}.")
if self.sequence_state_dim % self.sequence_state_dim != 0:
raise ValueError(
"`sequence_state_dim` should be a round multiple of `sequence_state_dim`, got"
f" {self.sequence_state_dim} and {self.sequence_state_dim}."
)
if self.pairwise_state_dim % self.pairwise_state_dim != 0:
raise ValueError(
"`pairwise_state_dim` should be a round multiple of `pairwise_state_dim`, got"
f" {self.pairwise_state_dim} and {self.pairwise_state_dim}."
)
sequence_num_heads = self.sequence_state_dim // self.sequence_head_width
pairwise_num_heads = self.pairwise_state_dim // self.pairwise_head_width
if self.sequence_state_dim != sequence_num_heads * self.sequence_head_width:
raise ValueError(
"`sequence_state_dim` should be equal to `sequence_num_heads * sequence_head_width, got"
f" {self.sequence_state_dim} != {sequence_num_heads} * {self.sequence_head_width}."
)
if self.pairwise_state_dim != pairwise_num_heads * self.pairwise_head_width:
raise ValueError(
"`pairwise_state_dim` should be equal to `pairwise_num_heads * pairwise_head_width, got"
f" {self.pairwise_state_dim} != {pairwise_num_heads} * {self.pairwise_head_width}."
)
if self.pairwise_state_dim % 2 != 0:
raise ValueError(f"`pairwise_state_dim` should be even, got {self.pairwise_state_dim}.")
if self.dropout >= 0.4:
raise ValueError(f"`dropout` should not be greater than 0.4, got {self.dropout}.")
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = asdict(self)
output["structure_module"] = self.structure_module.to_dict()
return output
@dataclass
class StructureModuleConfig:
"""
Args:
sequence_dim:
Single representation channel dimension
pairwise_dim:
Pair representation channel dimension
ipa_dim:
IPA hidden channel dimension
resnet_dim:
Angle resnet (Alg. 23 lines 11-14) hidden channel dimension
num_heads_ipa:
Number of IPA heads
num_qk_points:
Number of query/key points to generate during IPA
num_v_points:
Number of value points to generate during IPA
dropout_rate:
Dropout rate used throughout the layer
num_blocks:
Number of structure module blocks
num_transition_layers:
Number of layers in the single representation transition (Alg. 23 lines 8-9)
num_resnet_blocks:
Number of blocks in the angle resnet
num_angles:
Number of angles to generate in the angle resnet
trans_scale_factor:
Scale of single representation transition hidden dimension
epsilon:
Small number used in angle resnet normalization
inf:
Large number used for attention masking
"""
sequence_dim: int = 384
pairwise_dim: int = 128
ipa_dim: int = 16
resnet_dim: int = 128
num_heads_ipa: int = 12
num_qk_points: int = 4
num_v_points: int = 8
dropout_rate: float = 0.1
num_blocks: int = 8
num_transition_layers: int = 1
num_resnet_blocks: int = 2
num_angles: int = 7
trans_scale_factor: int = 10
epsilon: float = 1e-8
inf: float = 1e5
def to_dict(self):
return asdict(self)
def get_default_vocab_list():
return (
"<cls>",
"<pad>",
"<eos>",
"<unk>",
"L",
"A",
"G",
"V",
"S",
"E",
"R",
"T",
"I",
"D",
"P",
"K",
"Q",
"N",
"F",
"Y",
"M",
"H",
"W",
"C",
"X",
"B",
"U",
"Z",
"O",
".",
"-",
"<null_1>",
"<mask>",
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 86,749 | src/transformers/models/esm/modeling_esmfold.py | # coding=utf-8
# Copyright 2022 Meta and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import math
import sys
from dataclasses import dataclass
from functools import partial
from typing import Callable, Dict, List, Optional, Sequence, Tuple, Union
import numpy as np
import torch
import torch.nn as nn
from torch.nn import LayerNorm
from ...deepspeed import is_deepspeed_available
from ...modeling_outputs import ModelOutput
from ...utils import (
ContextManagers,
add_start_docstrings,
add_start_docstrings_to_model_forward,
is_scipy_available,
logging,
replace_return_docstrings,
)
from .configuration_esm import EsmConfig
from .modeling_esm import ESM_START_DOCSTRING, EsmModel, EsmPreTrainedModel
from .openfold_utils import (
OFProtein,
Rigid,
Rotation,
atom14_to_atom37,
chunk_layer,
compute_predicted_aligned_error,
compute_tm,
frames_and_literature_positions_to_atom14_pos,
make_atom14_masks,
residue_constants,
to_pdb,
torsion_angles_to_frames,
)
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/esmfold_v1"
_CONFIG_FOR_DOC = "EsmConfig"
@dataclass
class EsmForProteinFoldingOutput(ModelOutput):
"""
Output type of [`EsmForProteinFoldingOutput`].
Args:
frames (`torch.FloatTensor`):
Output frames.
sidechain_frames (`torch.FloatTensor`):
Output sidechain frames.
unnormalized_angles (`torch.FloatTensor`):
Predicted unnormalized backbone and side chain torsion angles.
angles (`torch.FloatTensor`):
Predicted backbone and side chain torsion angles.
positions (`torch.FloatTensor`):
Predicted positions of the backbone and side chain atoms.
states (`torch.FloatTensor`):
Hidden states from the protein folding trunk.
s_s (`torch.FloatTensor`):
Per-residue embeddings derived by concatenating the hidden states of each layer of the ESM-2 LM stem.
s_z (`torch.FloatTensor`):
Pairwise residue embeddings.
distogram_logits (`torch.FloatTensor`):
Input logits to the distogram used to compute residue distances.
lm_logits (`torch.FloatTensor`):
Logits output by the ESM-2 protein language model stem.
aatype (`torch.FloatTensor`):
Input amino acids (AlphaFold2 indices).
atom14_atom_exists (`torch.FloatTensor`):
Whether each atom exists in the atom14 representation.
residx_atom14_to_atom37 (`torch.FloatTensor`):
Mapping between atoms in the atom14 and atom37 representations.
residx_atom37_to_atom14 (`torch.FloatTensor`):
Mapping between atoms in the atom37 and atom14 representations.
atom37_atom_exists (`torch.FloatTensor`):
Whether each atom exists in the atom37 representation.
residue_index (`torch.FloatTensor`):
The index of each residue in the protein chain. Unless internal padding tokens are used, this will just be
a sequence of integers from 0 to `sequence_length`.
lddt_head (`torch.FloatTensor`):
Raw outputs from the lddt head used to compute plddt.
plddt (`torch.FloatTensor`):
Per-residue confidence scores. Regions of low confidence may indicate areas where the model's prediction is
uncertain, or where the protein structure is disordered.
ptm_logits (`torch.FloatTensor`):
Raw logits used for computing ptm.
ptm (`torch.FloatTensor`):
TM-score output representing the model's high-level confidence in the overall structure.
aligned_confidence_probs (`torch.FloatTensor`):
Per-residue confidence scores for the aligned structure.
predicted_aligned_error (`torch.FloatTensor`):
Predicted error between the model's prediction and the ground truth.
max_predicted_aligned_error (`torch.FloatTensor`):
Per-sample maximum predicted error.
"""
frames: torch.FloatTensor = None
sidechain_frames: torch.FloatTensor = None
unnormalized_angles: torch.FloatTensor = None
angles: torch.FloatTensor = None
positions: torch.FloatTensor = None
states: torch.FloatTensor = None
s_s: torch.FloatTensor = None
s_z: torch.FloatTensor = None
distogram_logits: torch.FloatTensor = None
lm_logits: torch.FloatTensor = None
aatype: torch.FloatTensor = None
atom14_atom_exists: torch.FloatTensor = None
residx_atom14_to_atom37: torch.FloatTensor = None
residx_atom37_to_atom14: torch.FloatTensor = None
atom37_atom_exists: torch.FloatTensor = None
residue_index: torch.FloatTensor = None
lddt_head: torch.FloatTensor = None
plddt: torch.FloatTensor = None
ptm_logits: torch.FloatTensor = None
ptm: torch.FloatTensor = None
aligned_confidence_probs: torch.FloatTensor = None
predicted_aligned_error: torch.FloatTensor = None
max_predicted_aligned_error: torch.FloatTensor = None
ESMFOLD_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
masking_pattern (`torch.LongTensor` of shape `({0})`, *optional*):
Locations of tokens to mask during training as a form of regularization. Mask values selected in `[0, 1]`.
num_recycles (`int`, *optional*, defaults to `None`):
Number of times to recycle the input sequence. If `None`, defaults to `config.num_recycles`. "Recycling"
consists of passing the output of the folding trunk back in as input to the trunk. During training, the
number of recycles should vary with each batch, to ensure that the model learns to output valid predictions
after each recycle. During inference, num_recycles should be set to the highest value that the model was
trained with for maximum accuracy. Accordingly, when this value is set to `None`, config.max_recycles is
used.
"""
def is_fp16_enabled():
# Autocast world
fp16_enabled = torch.get_autocast_gpu_dtype() == torch.float16
fp16_enabled = fp16_enabled and torch.is_autocast_enabled()
return fp16_enabled
def is_deepspeed_initialized():
if is_deepspeed_available():
return False
else:
try:
import deepspeed
# This is not available in all DeepSpeed versions.
return deepspeed.utils.is_initialized()
except Exception:
return False
def collate_dense_tensors(samples: List[torch.Tensor], pad_v: float = 0) -> torch.Tensor:
"""
Takes a list of tensors with the following dimensions:
[(d_11, ..., d_1K),
(d_21, ..., d_2K), ..., (d_N1, ..., d_NK)]
and stack + pads them into a single tensor of:
(N, max_i=1,N { d_i1 }, ..., max_i=1,N {diK})
"""
if len(samples) == 0:
return torch.Tensor()
if len({x.dim() for x in samples}) != 1:
raise RuntimeError(f"Samples has varying dimensions: {[x.dim() for x in samples]}")
(device,) = tuple({x.device for x in samples}) # assumes all on same device
max_shape = [max(lst) for lst in zip(*[x.shape for x in samples])]
result = torch.empty(len(samples), *max_shape, dtype=samples[0].dtype, device=device)
result.fill_(pad_v)
for i in range(len(samples)):
result_i = result[i]
t = samples[i]
result_i[tuple(slice(0, k) for k in t.shape)] = t
return result
def flatten_final_dims(t: torch.Tensor, no_dims: int):
return t.reshape(t.shape[:-no_dims] + (-1,))
def permute_final_dims(tensor: torch.Tensor, inds: List[int]):
zero_index = -1 * len(inds)
first_inds = list(range(len(tensor.shape[:zero_index])))
return tensor.permute(first_inds + [zero_index + i for i in inds])
def dict_multimap(fn, dicts):
first = dicts[0]
new_dict = {}
for k, v in first.items():
all_v = [d[k] for d in dicts]
if type(v) is dict:
new_dict[k] = dict_multimap(fn, all_v)
else:
new_dict[k] = fn(all_v)
return new_dict
def trunc_normal_init_(weights, scale=1.0, fan="fan_in"):
shape = weights.shape
scale = scale / max(1, shape[1])
if not is_scipy_available():
logger.warning(
"This init requires scipy, but scipy was not found, default to an approximation that might not be"
" equivalent."
)
std = math.sqrt(scale)
torch.nn.init.normal_(weights, std=std).clamp(min=0.0, max=2.0 * std)
else:
from scipy.stats import truncnorm
std = math.sqrt(scale) / truncnorm.std(a=-2, b=2, loc=0, scale=1)
samples = truncnorm.rvs(a=-2, b=2, loc=0, scale=std, size=weights.numel())
samples = np.reshape(samples, shape)
weights.copy_(torch.tensor(samples, device=weights.device))
def ipa_point_weights_init_(weights):
with torch.no_grad():
softplus_inverse_1 = 0.541324854612918
weights.fill_(softplus_inverse_1)
class EsmFoldLinear(nn.Linear):
"""
A Linear layer with built-in nonstandard initializations. Called just like torch.nn.Linear.
Implements the initializers in 1.11.4, plus some additional ones found in the code.
"""
def __init__(
self,
in_dim: int,
out_dim: int,
bias: bool = True,
init: str = "default",
init_fn: Optional[Callable[[torch.Tensor, torch.Tensor], None]] = None,
):
"""
Args:
in_dim:
The final dimension of inputs to the layer
out_dim:
The final dimension of layer outputs
bias:
Whether to learn an additive bias. True by default
init:
The initializer to use. Choose from:
"default": LeCun fan-in truncated normal initialization "relu": He initialization w/ truncated normal
distribution "glorot": Fan-average Glorot uniform initialization "gating": Weights=0, Bias=1 "normal":
Normal initialization with std=1/sqrt(fan_in) "final": Weights=0, Bias=0
Overridden by init_fn if the latter is not None.
init_fn:
A custom initializer taking weight and bias as inputs. Overrides init if not None.
"""
super().__init__(in_dim, out_dim, bias=bias)
if bias:
with torch.no_grad():
self.bias.fill_(0)
self.init = init
self.init_fn = init_fn
if init not in ["default", "relu", "glorot", "gating", "normal", "final"]:
raise ValueError("Invalid init string.")
class EsmFoldLayerNorm(nn.Module):
def __init__(self, c_in, eps=1e-5):
super().__init__()
self.c_in = (c_in,)
self.eps = eps
self.weight = nn.Parameter(torch.ones(c_in))
self.bias = nn.Parameter(torch.zeros(c_in))
def forward(self, x):
d = x.dtype
if d is torch.bfloat16 and not is_deepspeed_initialized():
with torch.cuda.amp.autocast(enabled=False):
out = nn.functional.layer_norm(x, self.c_in, self.weight.to(dtype=d), self.bias.to(dtype=d), self.eps)
else:
out = nn.functional.layer_norm(x, self.c_in, self.weight, self.bias, self.eps)
return out
@torch.jit.ignore
def softmax_no_cast(t: torch.Tensor, dim: int = -1) -> torch.Tensor:
"""
Softmax, but without automatic casting to fp32 when the input is of type bfloat16
"""
d = t.dtype
if d is torch.bfloat16 and not is_deepspeed_initialized():
with torch.cuda.amp.autocast(enabled=False):
s = torch.nn.functional.softmax(t, dim=dim)
else:
s = torch.nn.functional.softmax(t, dim=dim)
return s
class EsmFoldAttention(nn.Module):
"""
Standard multi-head attention using AlphaFold's default layer initialization. Allows multiple bias vectors.
"""
def __init__(
self,
c_q: int,
c_k: int,
c_v: int,
c_hidden: int,
no_heads: int,
gating: bool = True,
):
"""
Args:
c_q:
Input dimension of query data
c_k:
Input dimension of key data
c_v:
Input dimension of value data
c_hidden:
Per-head hidden dimension
no_heads:
Number of attention heads
gating:
Whether the output should be gated using query data
"""
super().__init__()
self.c_q = c_q
self.c_k = c_k
self.c_v = c_v
self.c_hidden = c_hidden
self.no_heads = no_heads
self.gating = gating
# DISCREPANCY: c_hidden is not the per-head channel dimension, as
# stated in the supplement, but the overall channel dimension.
self.linear_q = EsmFoldLinear(self.c_q, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_k = EsmFoldLinear(self.c_k, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_v = EsmFoldLinear(self.c_v, self.c_hidden * self.no_heads, bias=False, init="glorot")
self.linear_o = EsmFoldLinear(self.c_hidden * self.no_heads, self.c_q, init="final")
self.linear_g = None
if self.gating:
self.linear_g = EsmFoldLinear(self.c_q, self.c_hidden * self.no_heads, init="gating")
self.sigmoid = nn.Sigmoid()
def _prep_qkv(self, q_x: torch.Tensor, kv_x: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
# [*, Q/K/V, H * C_hidden]
q = self.linear_q(q_x)
k = self.linear_k(kv_x)
v = self.linear_v(kv_x)
# [*, Q/K, H, C_hidden]
q = q.view(q.shape[:-1] + (self.no_heads, -1))
k = k.view(k.shape[:-1] + (self.no_heads, -1))
v = v.view(v.shape[:-1] + (self.no_heads, -1))
# [*, H, Q/K, C_hidden]
q = q.transpose(-2, -3)
k = k.transpose(-2, -3)
v = v.transpose(-2, -3)
q /= math.sqrt(self.c_hidden)
return q, k, v
def _wrap_up(self, o: torch.Tensor, q_x: torch.Tensor) -> torch.Tensor:
if self.linear_g is not None:
g = self.sigmoid(self.linear_g(q_x))
# [*, Q, H, C_hidden]
g = g.view(g.shape[:-1] + (self.no_heads, -1))
o = o * g
# [*, Q, H * C_hidden]
o = flatten_final_dims(o, 2)
# [*, Q, C_q]
o = self.linear_o(o)
return o
def forward(
self,
q_x: torch.Tensor,
kv_x: torch.Tensor,
biases: Optional[List[torch.Tensor]] = None,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
lma_q_chunk_size: int = 1024,
lma_kv_chunk_size: int = 4096,
use_flash: bool = False,
flash_mask: Optional[torch.Tensor] = None,
) -> torch.Tensor:
"""
Args:
q_x:
[*, Q, C_q] query data
kv_x:
[*, K, C_k] key data
biases:
List of biases that broadcast to [*, H, Q, K]
use_memory_efficient_kernel:
Whether to use a custom memory-efficient attention kernel. This should be the default choice for most.
If none of the "use_<...>" flags are True, a stock PyTorch implementation is used instead
use_lma:
Whether to use low-memory attention (Staats & Rabe 2021). If none of the "use_<...>" flags are True, a
stock PyTorch implementation is used instead
lma_q_chunk_size:
Query chunk size (for LMA)
lma_kv_chunk_size:
Key/Value chunk size (for LMA)
Returns
[*, Q, C_q] attention update
"""
if use_lma and (lma_q_chunk_size is None or lma_kv_chunk_size is None):
raise ValueError("If use_lma is specified, lma_q_chunk_size and lma_kv_chunk_size must be provided")
if use_flash and biases is not None:
raise ValueError("use_flash is incompatible with the bias option. For masking, use flash_mask instead")
attn_options = [use_memory_efficient_kernel, use_lma, use_flash]
if sum(attn_options) > 1:
raise ValueError("Choose at most one alternative attention algorithm")
if biases is None:
biases = []
# [*, H, Q/K, C_hidden]
query, key, value = self._prep_qkv(q_x, kv_x)
key = permute_final_dims(key, (1, 0))
# [*, H, Q, K]
output = torch.matmul(query, key)
for b in biases:
output += b
output = softmax_no_cast(output, -1)
# [*, H, Q, C_hidden]
output = torch.matmul(output, value)
output = output.transpose(-2, -3)
output = self._wrap_up(output, q_x)
return output
class EsmFoldTriangleAttention(nn.Module):
def __init__(self, c_in, c_hidden, no_heads, starting=True, inf=1e9):
"""
Args:
c_in:
Input channel dimension
c_hidden:
Overall hidden channel dimension (not per-head)
no_heads:
Number of attention heads
"""
super().__init__()
self.c_in = c_in
self.c_hidden = c_hidden
self.no_heads = no_heads
self.starting = starting
self.inf = inf
self.layer_norm = LayerNorm(self.c_in)
self.linear = EsmFoldLinear(c_in, self.no_heads, bias=False, init="normal")
self.mha = EsmFoldAttention(self.c_in, self.c_in, self.c_in, self.c_hidden, self.no_heads)
@torch.jit.ignore
def _chunk(
self,
x: torch.Tensor,
biases: List[torch.Tensor],
chunk_size: int,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
inplace_safe: bool = False,
) -> torch.Tensor:
"triangle! triangle!"
mha_inputs = {
"q_x": x,
"kv_x": x,
"biases": biases,
}
return chunk_layer(
partial(self.mha, use_memory_efficient_kernel=use_memory_efficient_kernel, use_lma=use_lma),
mha_inputs,
chunk_size=chunk_size,
no_batch_dims=len(x.shape[:-2]),
_out=x if inplace_safe else None,
)
def forward(
self,
x: torch.Tensor,
mask: Optional[torch.Tensor] = None,
chunk_size: Optional[int] = None,
use_memory_efficient_kernel: bool = False,
use_lma: bool = False,
inplace_safe: bool = False,
) -> torch.Tensor:
"""
Args:
x:
[*, I, J, C_in] input tensor (e.g. the pair representation)
Returns:
[*, I, J, C_in] output tensor
"""
if mask is None:
# [*, I, J]
mask = x.new_ones(
x.shape[:-1],
)
if not self.starting:
x = x.transpose(-2, -3)
mask = mask.transpose(-1, -2)
# [*, I, J, C_in]
x = self.layer_norm(x)
# [*, I, 1, 1, J]
mask_bias = (self.inf * (mask - 1))[..., :, None, None, :]
# [*, H, I, J]
triangle_bias = permute_final_dims(self.linear(x), (2, 0, 1))
# [*, 1, H, I, J]
triangle_bias = triangle_bias.unsqueeze(-4)
biases = [mask_bias, triangle_bias]
if chunk_size is not None:
x = self._chunk(
x,
biases,
chunk_size,
use_memory_efficient_kernel=use_memory_efficient_kernel,
use_lma=use_lma,
inplace_safe=inplace_safe,
)
else:
x = self.mha(
q_x=x, kv_x=x, biases=biases, use_memory_efficient_kernel=use_memory_efficient_kernel, use_lma=use_lma
)
if not self.starting:
x = x.transpose(-2, -3)
return x
class EsmFoldTriangleMultiplicativeUpdate(nn.Module):
"""
Implements Algorithms 11 and 12.
"""
def __init__(self, config, _outgoing=True):
super().__init__()
c_hidden = config.pairwise_state_dim
self._outgoing = _outgoing
self.linear_a_p = EsmFoldLinear(c_hidden, c_hidden)
self.linear_a_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_b_p = EsmFoldLinear(c_hidden, c_hidden)
self.linear_b_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_g = EsmFoldLinear(c_hidden, c_hidden, init="gating")
self.linear_z = EsmFoldLinear(c_hidden, c_hidden, init="final")
self.layer_norm_in = LayerNorm(c_hidden)
self.layer_norm_out = LayerNorm(c_hidden)
self.sigmoid = nn.Sigmoid()
def _combine_projections(
self, a: torch.Tensor, b: torch.Tensor, _inplace_chunk_size: Optional[int] = None
) -> torch.Tensor:
if self._outgoing:
a = permute_final_dims(a, (2, 0, 1))
b = permute_final_dims(b, (2, 1, 0))
else:
a = permute_final_dims(a, (2, 1, 0))
b = permute_final_dims(b, (2, 0, 1))
if _inplace_chunk_size is not None:
# To be replaced by torch vmap
for i in range(0, a.shape[-3], _inplace_chunk_size):
a_chunk = a[..., i : i + _inplace_chunk_size, :, :]
b_chunk = b[..., i : i + _inplace_chunk_size, :, :]
a[..., i : i + _inplace_chunk_size, :, :] = torch.matmul(
a_chunk,
b_chunk,
)
p = a
else:
p = torch.matmul(a, b)
return permute_final_dims(p, (1, 2, 0))
def _inference_forward(
self,
z: torch.Tensor,
mask: Optional[torch.Tensor] = None,
inplace_chunk_size: Optional[int] = None,
with_add: bool = True,
):
"""
Args:
z:
A [*, N, N, C_z] pair representation
mask:
A [*, N, N] pair mask
inplace_chunk_size:
Size of chunks used in the main computation. Increase to trade memory for speed.
with_add:
If True, z is overwritten with (z + update). Otherwise, it is overwritten with (update).
Returns:
A reference to the overwritten z
More memory-efficient, inference-only version of the forward function. Uses in-place operations, fusion of the
addition that happens after this module in the Evoformer, a smidge of recomputation, and a cache of overwritten
values to lower peak memory consumption of this module from 5x the size of the input tensor z to 2.5x its size.
Useful for inference on extremely long sequences.
It works as follows. We will make reference to variables used in the default forward implementation below.
Naively, triangle multiplication attention requires the manifestation of 5 tensors the size of z: 1) z, the
"square" input tensor, 2) a, the first projection of z, 3) b, the second projection of b, 4) g, a z-sized mask,
and 5) a z-sized tensor for intermediate computations. For large N, this is prohibitively expensive; for
N=4000, for example, z is more than 8GB alone. To avoid this problem, we compute b, g, and all intermediate
tensors in small chunks, noting that the chunks required to compute a chunk of the output depend only on the
tensor a and corresponding vertical and horizontal chunks of z. This suggests an algorithm that loops over
pairs of chunks of z: hereafter "columns" and "rows" of z, even though each "column" and "row" in fact contains
inplace_chunk_size contiguous true columns and rows of z. Writing output chunks to a new tensor would bring
total memory consumption down to 3x the size of z. However, more memory can be saved by writing output chunks
directly to z in-place. WLOG, we choose to write output chunks vertically, overwriting the ith "column" of z at
the end of the ith iteration of the main loop. Despite this overwriting, the ith column is always one column
ahead of previously overwritten columns and can be recovered directly from z. After the first iteration,
however, the ith row of z is always at least partially overwritten. For this reason, we introduce the z-cache,
a tensor one-half the size of z. The z-cache initially contains the left half (2nd and 3rd quadrants) of z. For
0 < i < N/2, the missing left part of the ith row of z is recovered from this cache at the beginning of the ith
iteration. Once i exceeds n/2, the cache is "reoriented" to encompass the 3rd and 4th quadrants of z instead.
Though the 3rd quadrant of the original z is entirely overwritten at this point, it can be recovered from the
z-cache itself. Thereafter, the ith row of z can be recovered in its entirety from the reoriented z-cache.
After the final iteration, z has been completely overwritten and contains the triangular multiplicative update.
If with_add is True, it instead contains the sum of z and the triangular multiplicative update. In either case,
peak memory consumption is just 2.5x the size of z, disregarding memory used for chunks and other small
variables.
"""
if mask is None:
mask = z.new_ones(z.shape[:-1])
mask = mask.unsqueeze(-1)
def compute_projection_helper(pair, mask, a=True):
if a:
linear_g = self.linear_a_g
linear_p = self.linear_a_p
else:
linear_g = self.linear_b_g
linear_p = self.linear_b_p
pair = self.layer_norm_in(pair)
p = linear_g(pair)
p.sigmoid_()
p *= linear_p(pair)
p *= mask
p = permute_final_dims(p, (2, 0, 1))
return p
def compute_projection(pair, mask, a=True, chunked=True):
need_transpose = self._outgoing ^ a
if not chunked:
p = compute_projection_helper(pair, mask, a)
if need_transpose:
p = p.transpose(-1, -2)
else:
# This computation is chunked so as not to exceed our 2.5x
# budget with a large intermediate tensor
linear_g = self.linear_a_g if a else self.linear_b_g
c = linear_g.bias.shape[-1]
out_shape = pair.shape[:-3] + (c,) + pair.shape[-3:-1]
p = pair.new_zeros(out_shape)
for i in range(0, pair.shape[-3], inplace_chunk_size):
pair_chunk = pair[..., i : i + inplace_chunk_size, :, :]
pair_chunk = compute_projection_helper(
pair[..., i : i + inplace_chunk_size, :, :],
mask[..., i : i + inplace_chunk_size, :, :],
a,
)
if need_transpose:
pair_chunk = pair_chunk.transpose(-1, -2)
p[..., i : i + inplace_chunk_size] = pair_chunk
else:
p[..., i : i + inplace_chunk_size, :] = pair_chunk
del pair_chunk
return p
# We start by fully manifesting a. In addition to the input, this
# brings total memory consumption to 2x z (disregarding size of chunks)
# [*, N, N, c]
a = compute_projection(z, mask, True, chunked=True)
if inplace_chunk_size is not None:
n = a.shape[-1]
half_n = n // 2 + n % 2
row_dim = -3
col_dim = -2
b_chunk_dim = row_dim if self._outgoing else col_dim
def empty_slicer(t):
return [slice(None) for _ in t.shape]
def slice_tensor(t, start, end, dim):
# Slices start:end from the dim dimension of t
s = empty_slicer(t)
s[dim] = slice(start, end)
return t[s]
def flip_z_cache_(z_cache, z):
# "Reorient" the z_cache (see below), filling it with quadrants
# 3---recovered from the z_cache---and 4---recovered from z---
# of the input tensor z.
quadrant_3 = slice_tensor(z_cache, half_n, None, row_dim)
z_cache = z_cache.transpose(row_dim, col_dim)
# If n is odd, we need to shrink the z_cache by one row
z_cache = z_cache[..., : (n // 2), :, :]
# Move the 3rd quadrant of z into the
first_half_slicer = empty_slicer(z_cache)
first_half_slicer[col_dim] = slice(0, half_n)
z_cache[first_half_slicer] = quadrant_3
# Get the fourth quadrant of z
quadrant_4 = slice_tensor(z, half_n, None, row_dim)
quadrant_4 = slice_tensor(quadrant_4, half_n, None, col_dim)
# Insert said quadrant into the rotated z-cache
quadrant_3_slicer = empty_slicer(z_cache)
quadrant_3_slicer[col_dim] = slice(half_n, None)
z_cache[quadrant_3_slicer] = quadrant_4
return z_cache
# Initialize the z cache to the left half of z.
z_cache_shape = list(z.shape)
z_cache_shape[col_dim] = half_n
z_cache = z.new_zeros(z_cache_shape)
z_cache_slicer = empty_slicer(z_cache)
z_cache_slicer[col_dim] = slice(0, half_n)
z_cache.copy_(z[z_cache_slicer])
z_cache_rotated = False
# We need to reorient the z-cache at the halfway point, and we
# don't want a single chunk to straddle that point. We contract one
# of the chunks in the middle to address that problem.
i_range = list(range(0, half_n, inplace_chunk_size))
initial_offsets = [i_2 - i_1 for i_1, i_2 in zip(i_range, i_range[1:] + [half_n])]
after_half = list(range(half_n, n, inplace_chunk_size))
after_half_offsets = [inplace_chunk_size for _ in after_half]
combined_range_with_offsets = zip(i_range + after_half, initial_offsets + after_half_offsets)
for i, offset in combined_range_with_offsets:
if not z_cache_rotated and i >= half_n:
z_cache = flip_z_cache_(z_cache, z)
z_cache_rotated = True
z_chunk_b = slice_tensor(z, i, i + offset, b_chunk_dim)
mask_chunk = slice_tensor(mask, i, i + offset, b_chunk_dim)
z_chunk_b = z_chunk_b.clone()
if b_chunk_dim == col_dim:
z_chunk_b = slice_tensor(z, i, i + offset, col_dim)
else: # b_chunk_dim == row_dim
# In this case, the b-dimension (b_chunk_dim) is partially
# overwritten at the end of each iteration. We need to
# restore the missing component from the z-cache.
if not z_cache_rotated:
z_chunk_slicer = empty_slicer(z_chunk_b)
z_chunk_slicer[col_dim] = slice(0, half_n)
z_chunk_b[z_chunk_slicer] = slice_tensor(z_cache, i, i + offset, row_dim)
else:
z_cache_offset = i - half_n
z_chunk_b = slice_tensor(z_cache, z_cache_offset, z_cache_offset + offset, row_dim)
b_chunk = compute_projection(z_chunk_b, mask_chunk, a=False, chunked=False)
del z_chunk_b
x_chunk = torch.matmul(a, b_chunk)
x_chunk = permute_final_dims(x_chunk, (1, 2, 0))
x_chunk = self.layer_norm_out(x_chunk)
x_chunk = self.linear_z(x_chunk)
# The g dimension (col_dim) is parallel to and ahead of the
# overwrites in z. We can extract the g chunk normally.
z_chunk_g = slice_tensor(z, i, i + offset, col_dim)
g_chunk = self.linear_g(self.layer_norm_in(z_chunk_g))
g_chunk.sigmoid_()
del z_chunk_g
x_chunk *= g_chunk
# Write the columns into z in-place
z_slicer = empty_slicer(z)
z_slicer[col_dim] = slice(i, i + offset)
if with_add:
z[z_slicer] += x_chunk
else:
z[z_slicer] = x_chunk
else:
b = compute_projection(z, mask, False, False)
x = torch.matmul(a, b)
x = self.layer_norm_out(x)
x = self.linear_z(x)
g = self.linear_g(z)
g.sigmoid_()
x *= g
if with_add:
z += x
else:
z = x
return z
def forward(
self,
z: torch.Tensor,
mask: Optional[torch.Tensor] = None,
inplace_safe: bool = False,
_add_with_inplace: bool = False,
_inplace_chunk_size: Optional[int] = 256,
) -> torch.Tensor:
"""
Args:
x:
[*, N_res, N_res, C_z] input tensor
mask:
[*, N_res, N_res] input mask
Returns:
[*, N_res, N_res, C_z] output tensor
"""
if inplace_safe:
x = self._inference_forward(
z,
mask,
inplace_chunk_size=_inplace_chunk_size,
with_add=_add_with_inplace,
)
return x
if mask is None:
mask = z.new_ones(z.shape[:-1])
mask = mask.unsqueeze(-1)
z = self.layer_norm_in(z)
a = mask
a = a * self.sigmoid(self.linear_a_g(z))
a = a * self.linear_a_p(z)
b = mask
b = b * self.sigmoid(self.linear_b_g(z))
b = b * self.linear_b_p(z)
if is_fp16_enabled():
with torch.cuda.amp.autocast(enabled=False):
x = self._combine_projections(a.float(), b.float())
else:
x = self._combine_projections(a, b)
del a, b
x = self.layer_norm_out(x)
x = self.linear_z(x)
g = self.sigmoid(self.linear_g(z))
x = x * g
return x
class EsmFoldPreTrainedModel(EsmPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
# Subclass `EsMPreTrainedModel` to deal with special init
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, EsmFoldLinear):
with torch.no_grad():
if module.init_fn is not None:
module.init_fn(module.weight, module.bias)
elif module.init == "default":
trunc_normal_init_(module.weight, scale=1.0)
elif module.init == "relu":
trunc_normal_init_(module.weight, scale=2.0)
elif module.init == "glorot":
nn.init.xavier_uniform_(module.weight, gain=1)
elif module.init == "gating":
module.weight.fill_(0.0)
if module.bias:
module.bias.fill_(1.0)
elif module.init == "normal":
torch.nn.init.kaiming_normal_(module.weight, nonlinearity="linear")
elif module.init == "final":
module.weight.fill_(0.0)
elif isinstance(module, EsmFoldInvariantPointAttention):
ipa_point_weights_init_(module.head_weights)
elif isinstance(module, EsmFoldTriangularSelfAttentionBlock):
torch.nn.init.zeros_(module.tri_mul_in.linear_z.weight)
torch.nn.init.zeros_(module.tri_mul_in.linear_z.bias)
torch.nn.init.zeros_(module.tri_mul_out.linear_z.weight)
torch.nn.init.zeros_(module.tri_mul_out.linear_z.bias)
torch.nn.init.zeros_(module.tri_att_start.mha.linear_o.weight)
torch.nn.init.zeros_(module.tri_att_start.mha.linear_o.bias)
torch.nn.init.zeros_(module.tri_att_end.mha.linear_o.weight)
torch.nn.init.zeros_(module.tri_att_end.mha.linear_o.bias)
torch.nn.init.zeros_(module.sequence_to_pair.o_proj.weight)
torch.nn.init.zeros_(module.sequence_to_pair.o_proj.bias)
torch.nn.init.zeros_(module.pair_to_sequence.linear.weight)
torch.nn.init.zeros_(module.seq_attention.o_proj.weight)
torch.nn.init.zeros_(module.seq_attention.o_proj.bias)
torch.nn.init.zeros_(module.mlp_seq.mlp[-2].weight)
torch.nn.init.zeros_(module.mlp_seq.mlp[-2].bias)
torch.nn.init.zeros_(module.mlp_pair.mlp[-2].weight)
torch.nn.init.zeros_(module.mlp_pair.mlp[-2].bias)
else:
super()._init_weights(module)
class EsmFoldSelfAttention(nn.Module):
def __init__(self, embed_dim, num_heads, head_width, gated=False):
super().__init__()
assert embed_dim == num_heads * head_width
self.embed_dim = embed_dim
self.num_heads = num_heads
self.head_width = head_width
self.proj = nn.Linear(embed_dim, embed_dim * 3, bias=False)
self.o_proj = nn.Linear(embed_dim, embed_dim, bias=True)
self.gated = gated
if gated:
self.g_proj = nn.Linear(embed_dim, embed_dim)
torch.nn.init.zeros_(self.g_proj.weight)
torch.nn.init.ones_(self.g_proj.bias)
self.rescale_factor = self.head_width**-0.5
torch.nn.init.zeros_(self.o_proj.bias)
def forward(self, x, mask=None, bias=None, indices=None):
"""
Basic self attention with optional mask and external pairwise bias. To handle sequences of different lengths,
use mask.
Inputs:
x: batch of input sequneces (.. x L x C) mask: batch of boolean masks where 1=valid, 0=padding position (..
x L_k) bias: batch of scalar pairwise attention biases (.. x Lq x Lk x num_heads)
Outputs:
sequence projection (B x L x embed_dim), attention maps (B x L x L x num_heads)
"""
t = self.proj(x).view(*x.shape[:2], self.num_heads, -1)
t = t.permute(0, 2, 1, 3)
q, k, v = t.chunk(3, dim=-1)
q = self.rescale_factor * q
a = torch.einsum("...qc,...kc->...qk", q, k)
# Add external attention bias.
if bias is not None:
a = a + bias.permute(0, 3, 1, 2)
# Do not attend to padding tokens.
if mask is not None:
mask = mask[:, None, None]
a = a.masked_fill(mask == False, -np.inf) # noqa: E712
a = nn.functional.softmax(a, dim=-1)
y = torch.einsum("...hqk,...hkc->...qhc", a, v)
y = y.reshape(*y.shape[:2], -1)
if self.gated:
y = self.g_proj(x).sigmoid() * y
y = self.o_proj(y)
return y, a.permute(0, 3, 1, 2)
class EsmFoldDropout(nn.Module):
"""
Implementation of dropout with the ability to share the dropout mask along a particular dimension.
"""
def __init__(self, r: float, batch_dim: Union[int, List[int]]):
super().__init__()
self.r = r
if type(batch_dim) == int:
batch_dim = [batch_dim]
self.batch_dim = batch_dim
self.dropout = nn.Dropout(self.r)
def forward(self, x: torch.Tensor) -> torch.Tensor:
shape = list(x.shape)
if self.batch_dim is not None:
for bd in self.batch_dim:
shape[bd] = 1
return x * self.dropout(x.new_ones(shape))
class EsmFoldSequenceToPair(nn.Module):
def __init__(self, sequence_state_dim, inner_dim, pairwise_state_dim):
super().__init__()
self.layernorm = nn.LayerNorm(sequence_state_dim)
self.proj = nn.Linear(sequence_state_dim, inner_dim * 2, bias=True)
self.o_proj = nn.Linear(2 * inner_dim, pairwise_state_dim, bias=True)
torch.nn.init.zeros_(self.proj.bias)
torch.nn.init.zeros_(self.o_proj.bias)
def forward(self, sequence_state):
"""
Inputs:
sequence_state: B x L x sequence_state_dim
Output:
pairwise_state: B x L x L x pairwise_state_dim
Intermediate state:
B x L x L x 2*inner_dim
"""
assert len(sequence_state.shape) == 3
s = self.layernorm(sequence_state)
s = self.proj(s)
q, k = s.chunk(2, dim=-1)
prod = q[:, None, :, :] * k[:, :, None, :]
diff = q[:, None, :, :] - k[:, :, None, :]
x = torch.cat([prod, diff], dim=-1)
x = self.o_proj(x)
return x
class EsmFoldPairToSequence(nn.Module):
def __init__(self, pairwise_state_dim, num_heads):
super().__init__()
self.layernorm = nn.LayerNorm(pairwise_state_dim)
self.linear = nn.Linear(pairwise_state_dim, num_heads, bias=False)
def forward(self, pairwise_state):
"""
Inputs:
pairwise_state: B x L x L x pairwise_state_dim
Output:
pairwise_bias: B x L x L x num_heads
"""
assert len(pairwise_state.shape) == 4
z = self.layernorm(pairwise_state)
pairwise_bias = self.linear(z)
return pairwise_bias
class EsmFoldResidueMLP(nn.Module):
def __init__(self, embed_dim, inner_dim, dropout=0):
super().__init__()
self.mlp = nn.Sequential(
nn.LayerNorm(embed_dim),
nn.Linear(embed_dim, inner_dim),
nn.ReLU(),
nn.Linear(inner_dim, embed_dim),
nn.Dropout(dropout),
)
def forward(self, x):
return x + self.mlp(x)
class EsmFoldTriangularSelfAttentionBlock(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
sequence_state_dim = config.sequence_state_dim
pairwise_state_dim = config.pairwise_state_dim
sequence_num_heads = sequence_state_dim // config.sequence_head_width
pairwise_num_heads = pairwise_state_dim // config.pairwise_head_width
self.layernorm_1 = nn.LayerNorm(sequence_state_dim)
self.sequence_to_pair = EsmFoldSequenceToPair(sequence_state_dim, pairwise_state_dim // 2, pairwise_state_dim)
self.pair_to_sequence = EsmFoldPairToSequence(pairwise_state_dim, sequence_num_heads)
self.seq_attention = EsmFoldSelfAttention(
sequence_state_dim, sequence_num_heads, config.sequence_head_width, gated=True
)
self.tri_mul_out = EsmFoldTriangleMultiplicativeUpdate(config, _outgoing=True)
self.tri_mul_in = EsmFoldTriangleMultiplicativeUpdate(config, _outgoing=False)
self.tri_att_start = EsmFoldTriangleAttention(
pairwise_state_dim, config.pairwise_head_width, pairwise_num_heads, inf=1e9, starting=True
)
self.tri_att_end = EsmFoldTriangleAttention(
pairwise_state_dim, config.pairwise_head_width, pairwise_num_heads, inf=1e9, starting=False
)
self.mlp_seq = EsmFoldResidueMLP(sequence_state_dim, 4 * sequence_state_dim, dropout=config.dropout)
self.mlp_pair = EsmFoldResidueMLP(pairwise_state_dim, 4 * pairwise_state_dim, dropout=config.dropout)
self.drop = nn.Dropout(config.dropout)
self.row_drop = EsmFoldDropout(config.dropout * 2, 2)
self.col_drop = EsmFoldDropout(config.dropout * 2, 1)
def forward(self, sequence_state, pairwise_state, mask=None, chunk_size=None, **__kwargs):
"""
Inputs:
sequence_state: B x L x sequence_state_dim pairwise_state: B x L x L x pairwise_state_dim mask: B x L boolean
tensor of valid positions
Output:
sequence_state: B x L x sequence_state_dim pairwise_state: B x L x L x pairwise_state_dim
"""
if len(sequence_state.shape) != 3:
raise ValueError(f"`sequence_state` should be a 3d-tensor, got {len(sequence_state.shape)} dims.")
if len(pairwise_state.shape) != 4:
raise ValueError(f"`pairwise_state` should be a 4d-tensor, got {len(pairwise_state.shape)} dims.")
if mask is not None and len(mask.shape) != 2:
raise ValueError(f"`mask` should be a 2d-tensor, got {len(mask.shape)} dims.")
batch_dim, seq_dim, sequence_state_dim = sequence_state.shape
pairwise_state_dim = pairwise_state.shape[3]
if sequence_state_dim != self.config.sequence_state_dim:
raise ValueError(
"`sequence_state` last dimension should be equal to `self.sequence_state_dim`. Got"
f"{sequence_state_dim} != {self.config.sequence_state_dim}."
)
if pairwise_state_dim != self.config.pairwise_state_dim:
raise ValueError(
"`pairwise_state` last dimension should be equal to `self.pairwise_state_dim`. Got "
f"{pairwise_state_dim} != {self.config.pairwise_state_dim}."
)
if batch_dim != pairwise_state.shape[0]:
raise ValueError(
f"`sequence_state` and `pairwise_state` have inconsistent batch size: {batch_dim} != "
f"{pairwise_state.shape[0]}."
)
if seq_dim != pairwise_state.shape[1] or seq_dim != pairwise_state.shape[2]:
raise ValueError(
f"`sequence_state` and `pairwise_state` have inconsistent sequence length: {seq_dim} != "
f"{pairwise_state.shape[1]} or {pairwise_state.shape[2]}."
)
# Update sequence state
bias = self.pair_to_sequence(pairwise_state)
# Self attention with bias + mlp.
y = self.layernorm_1(sequence_state)
y, _ = self.seq_attention(y, mask=mask, bias=bias)
sequence_state = sequence_state + self.drop(y)
sequence_state = self.mlp_seq(sequence_state)
# Update pairwise state
pairwise_state = pairwise_state + self.sequence_to_pair(sequence_state)
# Axial attention with triangular bias.
tri_mask = mask.unsqueeze(2) * mask.unsqueeze(1) if mask is not None else None
pairwise_state = pairwise_state + self.row_drop(self.tri_mul_out(pairwise_state, mask=tri_mask))
pairwise_state = pairwise_state + self.col_drop(self.tri_mul_in(pairwise_state, mask=tri_mask))
pairwise_state = pairwise_state + self.row_drop(
self.tri_att_start(pairwise_state, mask=tri_mask, chunk_size=chunk_size)
)
pairwise_state = pairwise_state + self.col_drop(
self.tri_att_end(pairwise_state, mask=tri_mask, chunk_size=chunk_size)
)
# MLP over pairs.
pairwise_state = self.mlp_pair(pairwise_state)
return sequence_state, pairwise_state
class EsmCategoricalMixture:
def __init__(self, param, bins=50, start=0, end=1):
# All tensors are of shape ..., bins.
self.logits = param
bins = torch.linspace(start, end, bins + 1, device=self.logits.device, dtype=self.logits.dtype)
self.v_bins = (bins[:-1] + bins[1:]) / 2
def log_prob(self, true):
# Shapes are:
# self.probs: ... x bins
# true : ...
true_index = (true.unsqueeze(-1) - self.v_bins[[None] * true.ndim]).abs().argmin(-1)
nll = self.logits.log_softmax(-1)
return torch.take_along_dim(nll, true_index.unsqueeze(-1), dim=-1).squeeze(-1)
def mean(self):
return (self.logits.softmax(-1) @ self.v_bins.unsqueeze(1)).squeeze(-1)
def categorical_lddt(logits, bins=50):
# Logits are ..., 37, bins.
return EsmCategoricalMixture(logits, bins=bins).mean()
def get_axial_mask(mask):
"""
Helper to convert B x L mask of valid positions to axial mask used in row column attentions.
Input:
mask: B x L tensor of booleans
Output:
mask: B x L x L tensor of booleans
"""
if mask is None:
return None
if len(mask.shape) != 2:
raise ValueError(f"`mask` should be a 2d-tensor, got {len(mask.shape)} dims.")
batch_dim, seq_dim = mask.shape
m = mask.unsqueeze(1).expand(batch_dim, seq_dim, seq_dim)
m = m.reshape(batch_dim * seq_dim, seq_dim)
return m
class EsmFoldRelativePosition(nn.Module):
def __init__(self, config):
super().__init__()
self.bins = config.position_bins
# Note an additional offset is used so that the 0th position
# is reserved for masked pairs.
self.embedding = torch.nn.Embedding(2 * self.bins + 2, config.pairwise_state_dim)
def forward(self, residue_index, mask=None):
"""
Input:
residue_index: B x L tensor of indices (dytpe=torch.long) mask: B x L tensor of booleans
Output:
pairwise_state: B x L x L x pairwise_state_dim tensor of embeddings
"""
if residue_index.dtype != torch.long:
raise ValueError(f"`residue_index` has dtype {residue_index.dtype}, it should be `torch.long`.")
if mask is not None and residue_index.shape != mask.shape:
raise ValueError(
f"`residue_index` and `mask` have inconsistent shapes: {residue_index.shape} != {mask.shape}."
)
diff = residue_index[:, None, :] - residue_index[:, :, None]
diff = diff.clamp(-self.bins, self.bins)
diff = diff + self.bins + 1 # Add 1 to adjust for padding index.
if mask is not None:
mask = mask[:, None, :] * mask[:, :, None]
diff[mask == False] = 0 # noqa: E712
output = self.embedding(diff)
return output
class EsmFoldAngleResnetBlock(nn.Module):
def __init__(self, config):
super().__init__()
self.linear_1 = EsmFoldLinear(config.resnet_dim, config.resnet_dim, init="relu")
self.linear_2 = EsmFoldLinear(config.resnet_dim, config.resnet_dim, init="final")
self.relu = nn.ReLU()
def forward(self, a: torch.Tensor) -> torch.Tensor:
s_initial = a
a = self.relu(a)
a = self.linear_1(a)
a = self.relu(a)
a = self.linear_2(a)
return a + s_initial
class EsmFoldAngleResnet(nn.Module):
"""
Implements Algorithm 20, lines 11-14
"""
def __init__(self, config):
super().__init__()
self.config = config
self.linear_in = EsmFoldLinear(config.sequence_dim, config.resnet_dim)
self.linear_initial = EsmFoldLinear(config.sequence_dim, config.resnet_dim)
self.layers = nn.ModuleList()
for _ in range(config.num_resnet_blocks):
layer = EsmFoldAngleResnetBlock(config)
self.layers.append(layer)
self.linear_out = EsmFoldLinear(config.resnet_dim, config.num_angles * 2)
self.relu = nn.ReLU()
def forward(self, s: torch.Tensor, s_initial: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Args:
s:
[*, C_hidden] single embedding
s_initial:
[*, C_hidden] single embedding as of the start of the StructureModule
Returns:
[*, no_angles, 2] predicted angles
"""
# NOTE: The ReLU's applied to the inputs are absent from the supplement
# pseudocode but present in the source. For maximal compatibility with
# the pretrained weights, I'm going with the source.
# [*, C_hidden]
s_initial = self.relu(s_initial)
s_initial = self.linear_initial(s_initial)
s = self.relu(s)
s = self.linear_in(s)
s = s + s_initial
for l in self.layers:
s = l(s)
s = self.relu(s)
# [*, no_angles * 2]
s = self.linear_out(s)
# [*, no_angles, 2]
s = s.view(s.shape[:-1] + (-1, 2))
unnormalized_s = s
norm_denom = torch.sqrt(
torch.clamp(
torch.sum(s**2, dim=-1, keepdim=True),
min=self.config.epsilon,
)
)
s = s / norm_denom
return unnormalized_s, s
class EsmFoldInvariantPointAttention(nn.Module):
"""
Implements Algorithm 22.
"""
def __init__(self, config):
super().__init__()
self.config = config
c_s = config.sequence_dim
c_z = config.pairwise_dim
self.hidden_dim = config.ipa_dim
self.num_heads = config.num_heads_ipa
self.num_qk_points = config.num_qk_points
self.num_v_points = config.num_v_points
# These linear layers differ from their specifications in the
# supplement. There, they lack bias and use Glorot initialization.
# Here as in the official source, they have bias and use the default
# Lecun initialization.
hc = config.ipa_dim * config.num_heads_ipa
self.linear_q = EsmFoldLinear(c_s, hc)
self.linear_kv = EsmFoldLinear(c_s, 2 * hc)
hpq = config.num_heads_ipa * config.num_qk_points * 3
self.linear_q_points = EsmFoldLinear(c_s, hpq)
hpkv = config.num_heads_ipa * (config.num_qk_points + config.num_v_points) * 3
self.linear_kv_points = EsmFoldLinear(c_s, hpkv)
self.linear_b = EsmFoldLinear(c_z, config.num_heads_ipa)
self.head_weights = nn.Parameter(torch.zeros((config.num_heads_ipa)))
concat_out_dim = config.num_heads_ipa * (c_z + config.ipa_dim + config.num_v_points * 4)
self.linear_out = EsmFoldLinear(concat_out_dim, c_s, init="final")
self.softmax = nn.Softmax(dim=-1)
self.softplus = nn.Softplus()
def forward(
self,
s: torch.Tensor,
z: Optional[torch.Tensor],
r: Rigid,
mask: torch.Tensor,
_offload_inference: bool = False,
_z_reference_list: Optional[Sequence[torch.Tensor]] = None,
) -> torch.Tensor:
"""
Args:
s:
[*, N_res, C_s] single representation
z:
[*, N_res, N_res, C_z] pair representation
r:
[*, N_res] transformation object
mask:
[*, N_res] mask
Returns:
[*, N_res, C_s] single representation update
"""
z = [z]
#######################################
# Generate scalar and point activations
#######################################
# [*, N_res, H * C_hidden]
q = self.linear_q(s)
kv = self.linear_kv(s)
# [*, N_res, H, C_hidden]
q = q.view(q.shape[:-1] + (self.num_heads, -1))
# [*, N_res, H, 2 * C_hidden]
kv = kv.view(kv.shape[:-1] + (self.num_heads, -1))
# [*, N_res, H, C_hidden]
k, v = torch.split(kv, self.hidden_dim, dim=-1)
# [*, N_res, H * P_q * 3]
q_pts = self.linear_q_points(s)
# This is kind of clunky, but it's how the original does it
# [*, N_res, H * P_q, 3]
q_pts = torch.split(q_pts, q_pts.shape[-1] // 3, dim=-1)
q_pts = torch.stack(q_pts, dim=-1)
q_pts = r[..., None].apply(q_pts)
# [*, N_res, H, P_q, 3]
q_pts = q_pts.view(q_pts.shape[:-2] + (self.num_heads, self.num_qk_points, 3))
# [*, N_res, H * (P_q + P_v) * 3]
kv_pts = self.linear_kv_points(s)
# [*, N_res, H * (P_q + P_v), 3]
kv_pts = torch.split(kv_pts, kv_pts.shape[-1] // 3, dim=-1)
kv_pts = torch.stack(kv_pts, dim=-1)
kv_pts = r[..., None].apply(kv_pts)
# [*, N_res, H, (P_q + P_v), 3]
kv_pts = kv_pts.view(kv_pts.shape[:-2] + (self.num_heads, -1, 3))
# [*, N_res, H, P_q/P_v, 3]
k_pts, v_pts = torch.split(kv_pts, [self.num_qk_points, self.num_v_points], dim=-2)
##########################
# Compute attention scores
##########################
# [*, N_res, N_res, H]
b = self.linear_b(z[0])
if _offload_inference:
assert sys.getrefcount(z[0]) == 2
z[0] = z[0].cpu()
# [*, H, N_res, N_res]
if is_fp16_enabled():
with torch.cuda.amp.autocast(enabled=False):
a = torch.matmul(
permute_final_dims(q.float(), (1, 0, 2)), # [*, H, N_res, C_hidden]
permute_final_dims(k.float(), (1, 2, 0)), # [*, H, C_hidden, N_res]
)
else:
a = torch.matmul(
permute_final_dims(q, (1, 0, 2)), # [*, H, N_res, C_hidden]
permute_final_dims(k, (1, 2, 0)), # [*, H, C_hidden, N_res]
)
a *= math.sqrt(1.0 / (3 * self.hidden_dim))
a += math.sqrt(1.0 / 3) * permute_final_dims(b, (2, 0, 1))
# [*, N_res, N_res, H, P_q, 3]
pt_att = q_pts.unsqueeze(-4) - k_pts.unsqueeze(-5)
pt_att = pt_att**2
# [*, N_res, N_res, H, P_q]
pt_att = sum(torch.unbind(pt_att, dim=-1))
head_weights = self.softplus(self.head_weights).view(*((1,) * len(pt_att.shape[:-2]) + (-1, 1)))
head_weights = head_weights * math.sqrt(1.0 / (3 * (self.num_qk_points * 9.0 / 2)))
pt_att = pt_att * head_weights
# [*, N_res, N_res, H]
pt_att = torch.sum(pt_att, dim=-1) * (-0.5)
# [*, N_res, N_res]
square_mask = mask.unsqueeze(-1) * mask.unsqueeze(-2)
square_mask = self.config.inf * (square_mask - 1)
# [*, H, N_res, N_res]
pt_att = permute_final_dims(pt_att, (2, 0, 1))
a = a + pt_att
a = a + square_mask.unsqueeze(-3)
a = self.softmax(a)
################
# Compute output
################
# [*, N_res, H, C_hidden]
o = torch.matmul(a, v.transpose(-2, -3).to(dtype=a.dtype)).transpose(-2, -3)
# [*, N_res, H * C_hidden]
o = flatten_final_dims(o, 2)
# [*, H, 3, N_res, P_v]
o_pt = torch.sum(
(a[..., None, :, :, None] * permute_final_dims(v_pts, (1, 3, 0, 2))[..., None, :, :]),
dim=-2,
)
# [*, N_res, H, P_v, 3]
o_pt = permute_final_dims(o_pt, (2, 0, 3, 1))
o_pt = r[..., None, None].invert_apply(o_pt)
# [*, N_res, H * P_v]
o_pt_norm = flatten_final_dims(torch.sqrt(torch.sum(o_pt**2, dim=-1) + self.config.epsilon), 2)
# [*, N_res, H * P_v, 3]
o_pt = o_pt.reshape(*o_pt.shape[:-3], -1, 3)
if _offload_inference:
z[0] = z[0].to(o_pt.device)
# [*, N_res, H, C_z]
o_pair = torch.matmul(a.transpose(-2, -3), z[0].to(dtype=a.dtype))
# [*, N_res, H * C_z]
o_pair = flatten_final_dims(o_pair, 2)
# [*, N_res, C_s]
s = self.linear_out(
torch.cat((o, *torch.unbind(o_pt, dim=-1), o_pt_norm, o_pair), dim=-1).to(dtype=z[0].dtype)
)
return s
class EsmFoldBackboneUpdate(nn.Module):
"""
Implements part of Algorithm 23.
"""
def __init__(self, config):
super().__init__()
self.linear = EsmFoldLinear(config.sequence_dim, 6, init="final")
def forward(self, s: torch.Tensor) -> Tuple[torch.Tensor, torch.Tensor]:
"""
Args:
[*, N_res, C_s] single representation
Returns:
[*, N_res, 6] update vector
"""
# [*, 6]
update = self.linear(s)
return update
class EsmFoldStructureModuleTransitionLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.linear_1 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="relu")
self.linear_2 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="relu")
self.linear_3 = EsmFoldLinear(config.sequence_dim, config.sequence_dim, init="final")
self.relu = nn.ReLU()
def forward(self, s):
s_initial = s
s = self.linear_1(s)
s = self.relu(s)
s = self.linear_2(s)
s = self.relu(s)
s = self.linear_3(s)
s = s + s_initial
return s
class EsmFoldStructureModuleTransition(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layers = nn.ModuleList()
for _ in range(config.num_transition_layers):
l = EsmFoldStructureModuleTransitionLayer(config)
self.layers.append(l)
self.dropout = nn.Dropout(config.dropout_rate)
self.layer_norm = LayerNorm(config.sequence_dim)
def forward(self, s):
for l in self.layers:
s = l(s)
s = self.dropout(s)
s = self.layer_norm(s)
return s
class EsmFoldStructureModule(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
# Buffers to be lazily initialized later
# self.default_frames
# self.group_idx
# self.atom_mask
# self.lit_positions
self.layer_norm_s = LayerNorm(config.sequence_dim)
self.layer_norm_z = LayerNorm(config.pairwise_dim)
self.linear_in = EsmFoldLinear(config.sequence_dim, config.sequence_dim)
self.ipa = EsmFoldInvariantPointAttention(config)
self.ipa_dropout = nn.Dropout(config.dropout_rate)
self.layer_norm_ipa = LayerNorm(config.sequence_dim)
self.transition = EsmFoldStructureModuleTransition(config)
self.bb_update = EsmFoldBackboneUpdate(config)
self.angle_resnet = EsmFoldAngleResnet(config)
def forward(
self,
evoformer_output_dict,
aatype,
mask=None,
_offload_inference=False,
):
"""
Args:
evoformer_output_dict:
Dictionary containing:
"single":
[*, N_res, C_s] single representation
"pair":
[*, N_res, N_res, C_z] pair representation
aatype:
[*, N_res] amino acid indices
mask:
Optional [*, N_res] sequence mask
Returns:
A dictionary of outputs
"""
s = evoformer_output_dict["single"]
if mask is None:
# [*, N]
mask = s.new_ones(s.shape[:-1])
# [*, N, C_s]
s = self.layer_norm_s(s)
# [*, N, N, C_z]
z = self.layer_norm_z(evoformer_output_dict["pair"])
z_reference_list = None
if _offload_inference:
assert sys.getrefcount(evoformer_output_dict["pair"]) == 2
evoformer_output_dict["pair"] = evoformer_output_dict["pair"].cpu()
z_reference_list = [z]
z = None
# [*, N, C_s]
s_initial = s
s = self.linear_in(s)
# [*, N]
rigids = Rigid.identity(
s.shape[:-1],
s.dtype,
s.device,
self.training,
fmt="quat",
)
outputs = []
for i in range(self.config.num_blocks):
# [*, N, C_s]
s = s + self.ipa(
s,
z,
rigids,
mask,
_offload_inference=_offload_inference,
_z_reference_list=z_reference_list,
)
s = self.ipa_dropout(s)
s = self.layer_norm_ipa(s)
s = self.transition(s)
# [*, N]
rigids = rigids.compose_q_update_vec(self.bb_update(s))
# To hew as closely as possible to AlphaFold, we convert our
# quaternion-based transformations to rotation-matrix ones
# here
backb_to_global = Rigid(
Rotation(rot_mats=rigids.get_rots().get_rot_mats(), quats=None),
rigids.get_trans(),
)
backb_to_global = backb_to_global.scale_translation(self.config.trans_scale_factor)
# [*, N, 7, 2]
unnormalized_angles, angles = self.angle_resnet(s, s_initial)
all_frames_to_global = self.torsion_angles_to_frames(backb_to_global, angles, aatype)
pred_xyz = self.frames_and_literature_positions_to_atom14_pos(all_frames_to_global, aatype)
scaled_rigids = rigids.scale_translation(self.config.trans_scale_factor)
preds = {
"frames": scaled_rigids.to_tensor_7(),
"sidechain_frames": all_frames_to_global.to_tensor_4x4(),
"unnormalized_angles": unnormalized_angles,
"angles": angles,
"positions": pred_xyz,
"states": s,
}
outputs.append(preds)
rigids = rigids.stop_rot_gradient()
del z, z_reference_list
if _offload_inference:
evoformer_output_dict["pair"] = evoformer_output_dict["pair"].to(s.device)
outputs = dict_multimap(torch.stack, outputs)
outputs["single"] = s
return outputs
def _init_residue_constants(self, float_dtype, device):
if not hasattr(self, "default_frames"):
self.register_buffer(
"default_frames",
torch.tensor(
residue_constants.restype_rigid_group_default_frame,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "group_idx"):
self.register_buffer(
"group_idx",
torch.tensor(
residue_constants.restype_atom14_to_rigid_group,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "atom_mask"):
self.register_buffer(
"atom_mask",
torch.tensor(
residue_constants.restype_atom14_mask,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
if not hasattr(self, "lit_positions"):
self.register_buffer(
"lit_positions",
torch.tensor(
residue_constants.restype_atom14_rigid_group_positions,
dtype=float_dtype,
device=device,
requires_grad=False,
),
persistent=False,
)
def torsion_angles_to_frames(self, r, alpha, f):
# Lazily initialize the residue constants on the correct device
self._init_residue_constants(alpha.dtype, alpha.device)
# Separated purely to make testing less annoying
return torsion_angles_to_frames(r, alpha, f, self.default_frames)
def frames_and_literature_positions_to_atom14_pos(self, r, f): # [*, N, 8] # [*, N]
# Lazily initialize the residue constants on the correct device
self._init_residue_constants(r.get_rots().dtype, r.get_rots().device)
return frames_and_literature_positions_to_atom14_pos(
r,
f,
self.default_frames,
self.group_idx,
self.atom_mask,
self.lit_positions,
)
class EsmFoldingTrunk(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
c_s = config.sequence_state_dim
c_z = config.pairwise_state_dim
self.pairwise_positional_embedding = EsmFoldRelativePosition(config)
self.blocks = nn.ModuleList([EsmFoldTriangularSelfAttentionBlock(config) for _ in range(config.num_blocks)])
self.recycle_bins = 15
self.recycle_s_norm = nn.LayerNorm(c_s)
self.recycle_z_norm = nn.LayerNorm(c_z)
self.recycle_disto = nn.Embedding(self.recycle_bins, c_z)
self.recycle_disto.weight[0].detach().zero_()
self.structure_module = EsmFoldStructureModule(config.structure_module)
self.trunk2sm_s = nn.Linear(c_s, config.structure_module.sequence_dim)
self.trunk2sm_z = nn.Linear(c_z, config.structure_module.pairwise_dim)
self.chunk_size = config.chunk_size
def set_chunk_size(self, chunk_size):
# This parameter means the axial attention will be computed
# in a chunked manner. This should make the memory used more or less O(L) instead of O(L^2).
# It's equivalent to running a for loop over chunks of the dimension we're iterative over,
# where the chunk_size is the size of the chunks, so 128 would mean to parse 128-lengthed chunks.
self.chunk_size = chunk_size
def forward(self, seq_feats, pair_feats, true_aa, residx, mask, no_recycles):
"""
Inputs:
seq_feats: B x L x C tensor of sequence features pair_feats: B x L x L x C tensor of pair features residx: B
x L long tensor giving the position in the sequence mask: B x L boolean tensor indicating valid residues
Output:
predicted_structure: B x L x (num_atoms_per_residue * 3) tensor wrapped in a Coordinates object
"""
device = seq_feats.device
s_s_0 = seq_feats
s_z_0 = pair_feats
if no_recycles is None:
no_recycles = self.config.max_recycles
else:
if no_recycles < 0:
raise ValueError("Number of recycles must not be negative.")
no_recycles += 1 # First 'recycle' is just the standard forward pass through the model.
def trunk_iter(s, z, residx, mask):
z = z + self.pairwise_positional_embedding(residx, mask=mask)
for block in self.blocks:
s, z = block(s, z, mask=mask, residue_index=residx, chunk_size=self.chunk_size)
return s, z
s_s = s_s_0
s_z = s_z_0
recycle_s = torch.zeros_like(s_s)
recycle_z = torch.zeros_like(s_z)
recycle_bins = torch.zeros(*s_z.shape[:-1], device=device, dtype=torch.int64)
for recycle_idx in range(no_recycles):
with ContextManagers([] if recycle_idx == no_recycles - 1 else [torch.no_grad()]):
# === Recycling ===
recycle_s = self.recycle_s_norm(recycle_s.detach()).to(device)
recycle_z = self.recycle_z_norm(recycle_z.detach()).to(device)
recycle_z += self.recycle_disto(recycle_bins.detach()).to(device)
s_s, s_z = trunk_iter(s_s_0 + recycle_s, s_z_0 + recycle_z, residx, mask)
# === Structure module ===
structure = self.structure_module(
{"single": self.trunk2sm_s(s_s), "pair": self.trunk2sm_z(s_z)},
true_aa,
mask.float(),
)
recycle_s = s_s
recycle_z = s_z
# Distogram needs the N, CA, C coordinates, and bin constants same as alphafold.
recycle_bins = EsmFoldingTrunk.distogram(
structure["positions"][-1][:, :, :3],
3.375,
21.375,
self.recycle_bins,
)
structure["s_s"] = s_s
structure["s_z"] = s_z
return structure
@staticmethod
def distogram(coords, min_bin, max_bin, num_bins):
# Coords are [... L x 3 x 3], where it's [N, CA, C] x 3 coordinates.
boundaries = torch.linspace(
min_bin,
max_bin,
num_bins - 1,
device=coords.device,
)
boundaries = boundaries**2
N, CA, C = [x.squeeze(-2) for x in coords.chunk(3, dim=-2)]
# Infer CB coordinates.
b = CA - N
c = C - CA
a = b.cross(c, dim=-1)
CB = -0.58273431 * a + 0.56802827 * b - 0.54067466 * c + CA
dists = (CB[..., None, :, :] - CB[..., :, None, :]).pow(2).sum(dim=-1, keepdims=True)
bins = torch.sum(dists > boundaries, dim=-1) # [..., L, L]
return bins
# TODO Add information to the docstring about any methods that convert to PDB format, or otherwise prepare
# the outputs for downstream use.
@add_start_docstrings(
"""
ESMForProteinFolding is the HuggingFace port of the original ESMFold model. It consists of an ESM-2 "stem" followed
by a protein folding "head", although unlike most other output heads, this "head" is similar in size and runtime to
the rest of the model combined! It outputs a dictionary containing predicted structural information about the input
protein(s).
""",
ESM_START_DOCSTRING,
)
class EsmForProteinFolding(EsmPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.config = config
self.distogram_bins = 64
self.esm = EsmModel(config, add_pooling_layer=False)
self.esm.requires_grad_(False)
if self.config.esmfold_config.fp16_esm:
self.esm.half()
self.esm_feats = self.config.hidden_size
self.esm_attns = self.config.num_hidden_layers * self.config.num_attention_heads
self.esm_layers = self.config.num_hidden_layers
self.register_buffer("af2_to_esm", self._af2_to_esm_from_vocab_list(config.vocab_list))
self.esm_s_combine = nn.Parameter(torch.zeros(self.esm_layers + 1))
trunk_config = self.config.esmfold_config.trunk
c_s = trunk_config.sequence_state_dim
c_z = trunk_config.pairwise_state_dim
self.esm_s_mlp = nn.Sequential(
LayerNorm(self.esm_feats),
nn.Linear(self.esm_feats, c_s),
nn.ReLU(),
nn.Linear(c_s, c_s),
)
# 0 is padding, N is unknown residues, N + 1 is mask.
self.n_tokens_embed = residue_constants.restype_num + 3
self.pad_idx = 0
self.unk_idx = self.n_tokens_embed - 2
self.mask_idx = self.n_tokens_embed - 1
self.esm_dict_cls_idx = self.config.vocab_list.index("<cls>")
self.esm_dict_mask_idx = self.config.vocab_list.index("<mask>")
self.esm_dict_eos_idx = self.config.vocab_list.index("<eos>")
self.esm_dict_padding_idx = self.config.vocab_list.index("<pad>")
if self.config.esmfold_config.embed_aa:
self.embedding = nn.Embedding(self.n_tokens_embed, c_s, padding_idx=0)
self.trunk = EsmFoldingTrunk(trunk_config)
self.distogram_head = nn.Linear(c_z, self.distogram_bins)
self.ptm_head = nn.Linear(c_z, self.distogram_bins)
self.lm_head = nn.Linear(c_s, self.n_tokens_embed)
self.lddt_bins = 50
structure_module_config = trunk_config.structure_module
self.lddt_head = nn.Sequential(
nn.LayerNorm(structure_module_config.sequence_dim),
nn.Linear(structure_module_config.sequence_dim, self.config.esmfold_config.lddt_head_hid_dim),
nn.Linear(self.config.esmfold_config.lddt_head_hid_dim, self.config.esmfold_config.lddt_head_hid_dim),
nn.Linear(self.config.esmfold_config.lddt_head_hid_dim, 37 * self.lddt_bins),
)
@staticmethod
def _af2_to_esm_from_vocab_list(vocab_list: List[str]) -> torch.Tensor:
# Remember that t is shifted from residue_constants by 1 (0 is padding).
esm_reorder = [vocab_list.index("<pad>")] + [vocab_list.index(v) for v in residue_constants.restypes_with_x]
return torch.tensor(esm_reorder)
@add_start_docstrings_to_model_forward(ESMFOLD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=EsmForProteinFoldingOutput, config_class=EsmConfig)
def forward(
self,
input_ids: torch.Tensor,
attention_mask: torch.Tensor = None,
position_ids: Optional[torch.Tensor] = None,
masking_pattern: Optional[torch.Tensor] = None,
num_recycles: Optional[int] = None,
):
r"""
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, EsmForProteinFolding
>>> model = EsmForProteinFolding.from_pretrained("facebook/esmfold_v1")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/esmfold_v1")
>>> inputs = tokenizer(["MLKNVQVQLV"], return_tensors="pt", add_special_tokens=False) # A tiny random peptide
>>> outputs = model(**inputs)
>>> folded_positions = outputs.positions
```
"""
cfg = self.config.esmfold_config
aa = input_ids # B x L
B = aa.shape[0]
L = aa.shape[1]
device = input_ids.device
if attention_mask is None:
attention_mask = torch.ones_like(aa, device=device)
if position_ids is None:
position_ids = torch.arange(L, device=device).expand_as(input_ids)
# === ESM ===
esmaa = self.af2_idx_to_esm_idx(aa, attention_mask)
if masking_pattern is not None:
masked_aa, esmaa, mlm_targets = self.bert_mask(aa, esmaa, attention_mask, masking_pattern)
else:
masked_aa = aa
mlm_targets = None
# We get sequence and pair representations from whatever version of ESM /
# configuration we are using. The sequence representation esm_s is always
# present. The pair embedding esm_z may be present depending on the
# configuration of the model. If esm_z is not used by the model then it
# is returned as None here.
esm_s = self.compute_language_model_representations(esmaa)
# Convert esm_s and esm_z, if present, to the precision used by the trunk and
# the structure module. These tensors may be a lower precision if, for example,
# we're running the language model in fp16 precision.
esm_s = esm_s.to(self.esm_s_combine.dtype)
if cfg.esm_ablate_sequence:
esm_s = esm_s * 0
esm_s = esm_s.detach()
# === preprocessing ===
esm_s = (self.esm_s_combine.softmax(0).unsqueeze(0) @ esm_s).squeeze(2)
s_s_0 = self.esm_s_mlp(esm_s)
s_z_0 = s_s_0.new_zeros(B, L, L, cfg.trunk.pairwise_state_dim)
if self.config.esmfold_config.embed_aa:
s_s_0 += self.embedding(masked_aa)
structure: dict = self.trunk(s_s_0, s_z_0, aa, position_ids, attention_mask, no_recycles=num_recycles)
# Documenting what we expect:
structure = {
k: v
for k, v in structure.items()
if k
in [
"s_z",
"s_s",
"frames",
"sidechain_frames",
"unnormalized_angles",
"angles",
"positions",
"states",
]
}
# Add BERT mask for the loss to use, if available.
if mlm_targets:
structure["mlm_targets"] = mlm_targets
disto_logits = self.distogram_head(structure["s_z"])
disto_logits = (disto_logits + disto_logits.transpose(1, 2)) / 2
structure["distogram_logits"] = disto_logits
lm_logits = self.lm_head(structure["s_s"])
structure["lm_logits"] = lm_logits
structure["aatype"] = aa
make_atom14_masks(structure)
# Of course, this doesn't respect the true mask because it doesn't know about it...
# We're not going to properly mask change of index tensors:
# "residx_atom14_to_atom37",
# "residx_atom37_to_atom14",
for k in [
"atom14_atom_exists",
"atom37_atom_exists",
]:
structure[k] *= attention_mask.unsqueeze(-1)
structure["residue_index"] = position_ids
lddt_head = self.lddt_head(structure["states"]).reshape(structure["states"].shape[0], B, L, -1, self.lddt_bins)
structure["lddt_head"] = lddt_head
plddt = categorical_lddt(lddt_head[-1], bins=self.lddt_bins)
structure["plddt"] = plddt
ptm_logits = self.ptm_head(structure["s_z"])
structure["ptm_logits"] = ptm_logits
structure["ptm"] = compute_tm(ptm_logits, max_bin=31, no_bins=self.distogram_bins)
structure.update(compute_predicted_aligned_error(ptm_logits, max_bin=31, no_bins=self.distogram_bins))
return EsmForProteinFoldingOutput(**structure)
def af2_idx_to_esm_idx(self, aa, mask):
# avoid indexing on different devices
if self.af2_to_esm.device != aa.device:
self.af2_to_esm = self.af2_to_esm.to(aa.device)
aa = (aa + 1).masked_fill(mask != 1, 0)
return self.af2_to_esm[aa]
def compute_language_model_representations(self, esmaa: torch.Tensor) -> torch.Tensor:
device = next(self.parameters()).device
B, L = esmaa.shape # B = batch size, L = sequence length.
if self.config.esmfold_config.bypass_lm:
esm_s = torch.zeros(B, L, self.esm_s_combine.size[0], -1, self.esm_feats, device=device)
return esm_s
bosi, eosi = self.esm_dict_cls_idx, self.esm_dict_eos_idx
bos = esmaa.new_full((B, 1), bosi)
eos = esmaa.new_full((B, 1), self.esm_dict_padding_idx)
esmaa = torch.cat([bos, esmaa, eos], dim=1)
# Use the first padding index as eos during inference.
esmaa[range(B), (esmaa != 1).sum(1)] = eosi
# _, esm_z, esm_s = self.esm(esmaa, return_pairs=self.config.esmfold_config.use_esm_attn_map)
# Because we do not support use_esm_attn_map in the HF port as it is not used in any public models,
# esm_z is always None
esm_hidden_states = self.esm(esmaa, attention_mask=esmaa != 1, output_hidden_states=True)["hidden_states"]
esm_s = torch.stack(esm_hidden_states, dim=2)
esm_s = esm_s[:, 1:-1] # B, L, nLayers, C
return esm_s
def bert_mask(self, aa, esmaa, mask, pattern):
new_aa = aa.clone()
target = aa.clone()
new_esmaa = esmaa.clone()
new_aa[pattern == 1] = self.mask_idx
target[pattern != 1] = 0
new_esmaa[pattern == 1] = self.esm_dict_mask_idx
return new_aa, new_esmaa, target
@torch.no_grad()
def infer(
self,
seqs: Union[str, List[str]],
position_ids=None,
):
if type(seqs) is str:
lst = [seqs]
else:
lst = seqs
# Returns the raw outputs of the model given an input sequence.
device = next(self.parameters()).device
aatype = collate_dense_tensors(
[
torch.from_numpy(
residue_constants.sequence_to_onehot(
sequence=seq,
mapping=residue_constants.restype_order_with_x,
map_unknown_to_x=True,
)
)
.to(device)
.argmax(dim=1)
for seq in lst
]
) # B=1 x L
mask = collate_dense_tensors([aatype.new_ones(len(seq)) for seq in lst])
position_ids = (
torch.arange(aatype.shape[1], device=device).expand(len(lst), -1)
if position_ids is None
else position_ids.to(device)
)
if position_ids.ndim == 1:
position_ids = position_ids.unsqueeze(0)
return self.forward(
aatype,
mask,
position_ids=position_ids,
)
@staticmethod
def output_to_pdb(output: Dict) -> List[str]:
"""Returns the pbd (file) string from the model given the model output."""
output = {k: v.to("cpu").numpy() for k, v in output.items()}
pdbs = []
final_atom_positions = atom14_to_atom37(output["positions"][-1], output)
final_atom_mask = output["atom37_atom_exists"]
for i in range(output["aatype"].shape[0]):
aa = output["aatype"][i]
pred_pos = final_atom_positions[i]
mask = final_atom_mask[i]
resid = output["residue_index"][i] + 1
pred = OFProtein(
aatype=aa,
atom_positions=pred_pos,
atom_mask=mask,
residue_index=resid,
b_factors=output["plddt"][i],
)
pdbs.append(to_pdb(pred))
return pdbs
def infer_pdb(self, seqs, *args, **kwargs) -> str:
"""Returns the pdb (file) string from the model given an input sequence."""
assert type(seqs) is str
output = self.infer(seqs, *args, **kwargs)
return self.output_to_pdb(output)[0]
def infer_pdbs(self, seqs: List[str], *args, **kwargs) -> List[str]:
"""Returns the pdb (file) string from the model given an input sequence."""
output = self.infer(seqs, *args, **kwargs)
return self.output_to_pdb(output)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 1,472 | src/transformers/models/herbert/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available
_import_structure = {"tokenization_herbert": ["HerbertTokenizer"]}
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_herbert_fast"] = ["HerbertTokenizerFast"]
if TYPE_CHECKING:
from .tokenization_herbert import HerbertTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_herbert_fast import HerbertTokenizerFast
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 6,549 | src/transformers/models/herbert/tokenization_herbert_fast.py | # coding=utf-8
# Copyright 2020 The Google AI Language Team Authors, Allegro.pl, Facebook Inc. and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import List, Optional, Tuple
from ...tokenization_utils_fast import PreTrainedTokenizerFast
from ...utils import logging
from .tokenization_herbert import HerbertTokenizer
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "vocab.json", "merges_file": "merges.txt", "tokenizer_file": "tokenizer.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"allegro/herbert-base-cased": "https://huggingface.co/allegro/herbert-base-cased/resolve/main/vocab.json"
},
"merges_file": {
"allegro/herbert-base-cased": "https://huggingface.co/allegro/herbert-base-cased/resolve/main/merges.txt"
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"allegro/herbert-base-cased": 514}
PRETRAINED_INIT_CONFIGURATION = {}
class HerbertTokenizerFast(PreTrainedTokenizerFast):
"""
Construct a "Fast" BPE tokenizer for HerBERT (backed by HuggingFace's *tokenizers* library).
Peculiarities:
- uses BERT's pre-tokenizer: BertPreTokenizer splits tokens on spaces, and also on punctuation. Each occurrence of
a punctuation character will be treated separately.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the methods. Users should refer to the
superclass for more information regarding methods.
Args:
vocab_file (`str`):
Path to the vocabulary file.
merges_file (`str`):
Path to the merges file.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
slow_tokenizer_class = HerbertTokenizer
def __init__(
self,
vocab_file=None,
merges_file=None,
tokenizer_file=None,
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
sep_token="</s>",
**kwargs,
):
super().__init__(
vocab_file,
merges_file,
tokenizer_file=tokenizer_file,
cls_token=cls_token,
unk_token=unk_token,
pad_token=pad_token,
mask_token=mask_token,
sep_token=sep_token,
**kwargs,
)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. An HerBERT, like BERT sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
cls = [self.cls_token_id]
sep = [self.sep_token_id]
if token_ids_1 is None:
return cls + token_ids_0 + sep
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. HerBERT, like
BERT sequence pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
files = self._tokenizer.model.save(save_directory, name=filename_prefix)
return tuple(files)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 25,031 | src/transformers/models/herbert/tokenization_herbert.py | # coding=utf-8
# Copyright 2020 The Google AI Language Team Authors, Allegro.pl, Facebook Inc. and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import json
import os
import re
import unicodedata
from typing import List, Optional, Tuple
from ...tokenization_utils import PreTrainedTokenizer, _is_control, _is_punctuation, _is_whitespace
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {
"vocab_file": "vocab.json",
"merges_file": "merges.txt",
}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"allegro/herbert-base-cased": "https://huggingface.co/allegro/herbert-base-cased/resolve/main/vocab.json"
},
"merges_file": {
"allegro/herbert-base-cased": "https://huggingface.co/allegro/herbert-base-cased/resolve/main/merges.txt"
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"allegro/herbert-base-cased": 514}
PRETRAINED_INIT_CONFIGURATION = {}
# Copied from transformers.models.xlm.tokenization_xlm.get_pairs
def get_pairs(word):
"""
Return set of symbol pairs in a word. word is represented as tuple of symbols (symbols being variable-length
strings)
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
return pairs
# Copied from transformers.models.xlm.tokenization_xlm.replace_unicode_punct
def replace_unicode_punct(text):
"""
Port of https://github.com/moses-smt/mosesdecoder/blob/master/scripts/tokenizer/replace-unicode-punctuation.perl
"""
text = text.replace("，", ",")
text = re.sub(r"。\s*", ". ", text)
text = text.replace("、", ",")
text = text.replace("”", '"')
text = text.replace("“", '"')
text = text.replace("∶", ":")
text = text.replace("：", ":")
text = text.replace("？", "?")
text = text.replace("《", '"')
text = text.replace("》", '"')
text = text.replace("）", ")")
text = text.replace("！", "!")
text = text.replace("（", "(")
text = text.replace("；", ";")
text = text.replace("１", "1")
text = text.replace("」", '"')
text = text.replace("「", '"')
text = text.replace("０", "0")
text = text.replace("３", "3")
text = text.replace("２", "2")
text = text.replace("５", "5")
text = text.replace("６", "6")
text = text.replace("９", "9")
text = text.replace("７", "7")
text = text.replace("８", "8")
text = text.replace("４", "4")
text = re.sub(r"．\s*", ". ", text)
text = text.replace("～", "~")
text = text.replace("’", "'")
text = text.replace("…", "...")
text = text.replace("━", "-")
text = text.replace("〈", "<")
text = text.replace("〉", ">")
text = text.replace("【", "[")
text = text.replace("】", "]")
text = text.replace("％", "%")
return text
# Copied from transformers.models.xlm.tokenization_xlm.remove_non_printing_char
def remove_non_printing_char(text):
"""
Port of https://github.com/moses-smt/mosesdecoder/blob/master/scripts/tokenizer/remove-non-printing-char.perl
"""
output = []
for char in text:
cat = unicodedata.category(char)
if cat.startswith("C"):
continue
output.append(char)
return "".join(output)
# Copied from transformers.models.bert.tokenization_bert.whitespace_tokenize
def whitespace_tokenize(text):
"""Runs basic whitespace cleaning and splitting on a piece of text."""
text = text.strip()
if not text:
return []
tokens = text.split()
return tokens
# Copied from transformers.models.bert.tokenization_bert.BasicTokenizer
class BasicTokenizer(object):
"""
Constructs a BasicTokenizer that will run basic tokenization (punctuation splitting, lower casing, etc.).
Args:
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
"""
def __init__(self, do_lower_case=True, never_split=None, tokenize_chinese_chars=True, strip_accents=None):
if never_split is None:
never_split = []
self.do_lower_case = do_lower_case
self.never_split = set(never_split)
self.tokenize_chinese_chars = tokenize_chinese_chars
self.strip_accents = strip_accents
def tokenize(self, text, never_split=None):
"""
Basic Tokenization of a piece of text. Split on "white spaces" only, for sub-word tokenization, see
WordPieceTokenizer.
Args:
never_split (`List[str]`, *optional*)
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of token not to split.
"""
# union() returns a new set by concatenating the two sets.
never_split = self.never_split.union(set(never_split)) if never_split else self.never_split
text = self._clean_text(text)
# This was added on November 1st, 2018 for the multilingual and Chinese
# models. This is also applied to the English models now, but it doesn't
# matter since the English models were not trained on any Chinese data
# and generally don't have any Chinese data in them (there are Chinese
# characters in the vocabulary because Wikipedia does have some Chinese
# words in the English Wikipedia.).
if self.tokenize_chinese_chars:
text = self._tokenize_chinese_chars(text)
orig_tokens = whitespace_tokenize(text)
split_tokens = []
for token in orig_tokens:
if token not in never_split:
if self.do_lower_case:
token = token.lower()
if self.strip_accents is not False:
token = self._run_strip_accents(token)
elif self.strip_accents:
token = self._run_strip_accents(token)
split_tokens.extend(self._run_split_on_punc(token, never_split))
output_tokens = whitespace_tokenize(" ".join(split_tokens))
return output_tokens
def _run_strip_accents(self, text):
"""Strips accents from a piece of text."""
text = unicodedata.normalize("NFD", text)
output = []
for char in text:
cat = unicodedata.category(char)
if cat == "Mn":
continue
output.append(char)
return "".join(output)
def _run_split_on_punc(self, text, never_split=None):
"""Splits punctuation on a piece of text."""
if never_split is not None and text in never_split:
return [text]
chars = list(text)
i = 0
start_new_word = True
output = []
while i < len(chars):
char = chars[i]
if _is_punctuation(char):
output.append([char])
start_new_word = True
else:
if start_new_word:
output.append([])
start_new_word = False
output[-1].append(char)
i += 1
return ["".join(x) for x in output]
def _tokenize_chinese_chars(self, text):
"""Adds whitespace around any CJK character."""
output = []
for char in text:
cp = ord(char)
if self._is_chinese_char(cp):
output.append(" ")
output.append(char)
output.append(" ")
else:
output.append(char)
return "".join(output)
def _is_chinese_char(self, cp):
"""Checks whether CP is the codepoint of a CJK character."""
# This defines a "chinese character" as anything in the CJK Unicode block:
# https://en.wikipedia.org/wiki/CJK_Unified_Ideographs_(Unicode_block)
#
# Note that the CJK Unicode block is NOT all Japanese and Korean characters,
# despite its name. The modern Korean Hangul alphabet is a different block,
# as is Japanese Hiragana and Katakana. Those alphabets are used to write
# space-separated words, so they are not treated specially and handled
# like the all of the other languages.
if (
(cp >= 0x4E00 and cp <= 0x9FFF)
or (cp >= 0x3400 and cp <= 0x4DBF) #
or (cp >= 0x20000 and cp <= 0x2A6DF) #
or (cp >= 0x2A700 and cp <= 0x2B73F) #
or (cp >= 0x2B740 and cp <= 0x2B81F) #
or (cp >= 0x2B820 and cp <= 0x2CEAF) #
or (cp >= 0xF900 and cp <= 0xFAFF)
or (cp >= 0x2F800 and cp <= 0x2FA1F) #
): #
return True
return False
def _clean_text(self, text):
"""Performs invalid character removal and whitespace cleanup on text."""
output = []
for char in text:
cp = ord(char)
if cp == 0 or cp == 0xFFFD or _is_control(char):
continue
if _is_whitespace(char):
output.append(" ")
else:
output.append(char)
return "".join(output)
class HerbertTokenizer(PreTrainedTokenizer):
"""
Construct a BPE tokenizer for HerBERT.
Peculiarities:
- uses BERT's pre-tokenizer: BaseTokenizer splits tokens on spaces, and also on punctuation. Each occurrence of a
punctuation character will be treated separately.
- Such pretokenized input is BPE subtokenized
This tokenizer inherits from [`XLMTokenizer`] which contains most of the methods. Users should refer to the
superclass for more information regarding methods.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
def __init__(
self,
vocab_file,
merges_file,
tokenizer_file=None,
cls_token="<s>",
unk_token="<unk>",
pad_token="<pad>",
mask_token="<mask>",
sep_token="</s>",
bos_token="<s>",
do_lowercase_and_remove_accent=False,
additional_special_tokens=[
"<special0>",
"<special1>",
"<special2>",
"<special3>",
"<special4>",
"<special5>",
"<special6>",
"<special7>",
"<special8>",
"<special9>",
],
lang2id=None,
id2lang=None,
**kwargs,
):
super().__init__(
unk_token=unk_token,
bos_token=bos_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
additional_special_tokens=additional_special_tokens,
lang2id=lang2id,
id2lang=id2lang,
do_lowercase_and_remove_accent=do_lowercase_and_remove_accent,
tokenizer_file=None,
**kwargs,
)
try:
import sacremoses
except ImportError:
raise ImportError(
"You need to install sacremoses to use HerbertTokenizer. "
"See https://pypi.org/project/sacremoses/ for installation."
)
self.sm = sacremoses
# cache of sm.MosesPunctNormalizer instance
self.cache_moses_punct_normalizer = {}
# cache of sm.MosesTokenizer instance
self.cache_moses_tokenizer = {}
self.lang_with_custom_tokenizer = {"zh", "th", "ja"}
# True for current supported model (v1.2.0), False for XLM-17 & 100
self.do_lowercase_and_remove_accent = do_lowercase_and_remove_accent
self.lang2id = lang2id
self.id2lang = id2lang
if lang2id is not None and id2lang is not None:
assert len(lang2id) == len(id2lang)
self.ja_word_tokenizer = None
self.zh_word_tokenizer = None
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.decoder = {v: k for k, v in self.encoder.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
merges = merges_handle.read().split("\n")[:-1]
merges = [tuple(merge.split()[:2]) for merge in merges]
self.bpe_ranks = dict(zip(merges, range(len(merges))))
self.cache = {}
self.bert_pre_tokenizer = BasicTokenizer(
do_lower_case=False,
never_split=self.all_special_tokens,
tokenize_chinese_chars=False,
strip_accents=False,
)
@property
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.do_lower_case
def do_lower_case(self):
return self.do_lowercase_and_remove_accent
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.moses_punct_norm
def moses_punct_norm(self, text, lang):
if lang not in self.cache_moses_punct_normalizer:
punct_normalizer = self.sm.MosesPunctNormalizer(lang=lang)
self.cache_moses_punct_normalizer[lang] = punct_normalizer
else:
punct_normalizer = self.cache_moses_punct_normalizer[lang]
return punct_normalizer.normalize(text)
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.moses_tokenize
def moses_tokenize(self, text, lang):
if lang not in self.cache_moses_tokenizer:
moses_tokenizer = self.sm.MosesTokenizer(lang=lang)
self.cache_moses_tokenizer[lang] = moses_tokenizer
else:
moses_tokenizer = self.cache_moses_tokenizer[lang]
return moses_tokenizer.tokenize(text, return_str=False, escape=False)
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.moses_pipeline
def moses_pipeline(self, text, lang):
text = replace_unicode_punct(text)
text = self.moses_punct_norm(text, lang)
text = remove_non_printing_char(text)
return text
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.ja_tokenize
def ja_tokenize(self, text):
if self.ja_word_tokenizer is None:
try:
import Mykytea
self.ja_word_tokenizer = Mykytea.Mykytea(
f"-model {os.path.expanduser('~')}/local/share/kytea/model.bin"
)
except (AttributeError, ImportError):
logger.error(
"Make sure you install KyTea (https://github.com/neubig/kytea) and it's python wrapper"
" (https://github.com/chezou/Mykytea-python) with the following steps"
)
logger.error("1. git clone git@github.com:neubig/kytea.git && cd kytea")
logger.error("2. autoreconf -i")
logger.error("3. ./configure --prefix=$HOME/local")
logger.error("4. make && make install")
logger.error("5. pip install kytea")
raise
return list(self.ja_word_tokenizer.getWS(text))
@property
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.vocab_size
def vocab_size(self):
return len(self.encoder)
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.get_vocab
def get_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.bpe
def bpe(self, token):
word = tuple(token[:-1]) + (token[-1] + "</w>",)
if token in self.cache:
return self.cache[token]
pairs = get_pairs(word)
if not pairs:
return token + "</w>"
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = " ".join(word)
if word == "\n </w>":
word = "\n</w>"
self.cache[token] = word
return word
def _tokenize(self, text):
pre_tokens = self.bert_pre_tokenizer.tokenize(text)
split_tokens = []
for token in pre_tokens:
if token:
split_tokens.extend(list(self.bpe(token).split(" ")))
return split_tokens
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer._convert_token_to_id
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer._convert_id_to_token
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index, self.unk_token)
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.convert_tokens_to_string
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = "".join(tokens).replace("</w>", " ").strip()
return out_string
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.build_inputs_with_special_tokens
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. An XLM sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
bos = [self.bos_token_id]
sep = [self.sep_token_id]
if token_ids_1 is None:
return bos + token_ids_0 + sep
return bos + token_ids_0 + sep + token_ids_1 + sep
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.get_special_tokens_mask
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is not None:
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1]
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.create_token_type_ids_from_sequences
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. An XLM sequence
pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.save_vocabulary
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merge_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
index = 0
with open(merge_file, "w", encoding="utf-8") as writer:
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merge_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return vocab_file, merge_file
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.__getstate__
def __getstate__(self):
state = self.__dict__.copy()
state["sm"] = None
return state
# Copied from transformers.models.xlm.tokenization_xlm.XLMTokenizer.__setstate__
def __setstate__(self, d):
self.__dict__ = d
try:
import sacremoses
except ImportError:
raise ImportError(
"You need to install sacremoses to use XLMTokenizer. "
"See https://pypi.org/project/sacremoses/ for installation."
)
self.sm = sacremoses
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,166 | src/transformers/models/speech_to_text_2/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_sentencepiece_available,
is_speech_available,
is_torch_available,
)
_import_structure = {
"configuration_speech_to_text_2": ["SPEECH_TO_TEXT_2_PRETRAINED_CONFIG_ARCHIVE_MAP", "Speech2Text2Config"],
"processing_speech_to_text_2": ["Speech2Text2Processor"],
"tokenization_speech_to_text_2": ["Speech2Text2Tokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_speech_to_text_2"] = [
"SPEECH_TO_TEXT_2_PRETRAINED_MODEL_ARCHIVE_LIST",
"Speech2Text2ForCausalLM",
"Speech2Text2PreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_speech_to_text_2 import SPEECH_TO_TEXT_2_PRETRAINED_CONFIG_ARCHIVE_MAP, Speech2Text2Config
from .processing_speech_to_text_2 import Speech2Text2Processor
from .tokenization_speech_to_text_2 import Speech2Text2Tokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_speech_to_text_2 import (
SPEECH_TO_TEXT_2_PRETRAINED_MODEL_ARCHIVE_LIST,
Speech2Text2ForCausalLM,
Speech2Text2PreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 6,281 | src/transformers/models/speech_to_text_2/configuration_speech_to_text_2.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Speech2Text model configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
SPEECH_TO_TEXT_2_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/s2t-wav2vec2-large-en-de": (
"https://huggingface.co/facebook/s2t-wav2vec2-large-en-de/resolve/main/config.json"
),
# See all Speech2Text models at https://huggingface.co/models?filter=speech2text2
}
class Speech2Text2Config(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`Speech2Text2ForCausalLM`]. It is used to
instantiate an Speech2Text2 model according to the specified arguments, defining the model architecture.
Instantiating a configuration with the defaults will yield a similar configuration to that of the Speech2Text2
[facebook/s2t-wav2vec2-large-en-de](https://huggingface.co/facebook/s2t-wav2vec2-large-en-de) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 50265):
Vocabulary size of the Speech2Text model. Defines the number of different tokens that can be represented by
the `inputs_ids` passed when calling [`Speech2TextModel`]
d_model (`int`, *optional*, defaults to 1024):
Dimensionality of the layers and the pooler layer.
decoder_layers (`int`, *optional*, defaults to 12):
Number of decoder layers.
decoder_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer decoder.
decoder_ffn_dim (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often named feed-forward) layer in decoder.
activation_function (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the pooler. If string, `"gelu"`, `"relu"`,
`"silu"` and `"gelu_new"` are supported.
dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, and pooler.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
activation_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for activations inside the fully connected layer.
init_std (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
https://arxiv.org/abs/1909.11556>`__ for more details.
decoder_layerdrop (`float`, *optional*, defaults to 0.0):
The LayerDrop probability for the decoder. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556)
for more details.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
max_target_positions (`int`, *optional*, defaults to 1024):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
Example:
```python
>>> from transformers import Speech2Text2Config, Speech2Text2ForCausalLM
>>> # Initializing a Speech2Text2 s2t_transformer_s style configuration
>>> configuration = Speech2Text2Config()
>>> # Initializing a model (with random weights) from the s2t_transformer_s style configuration
>>> model = Speech2Text2ForCausalLM(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "speech_to_text_2"
keys_to_ignore_at_inference = ["past_key_values"]
attribute_map = {"num_attention_heads": "decoder_attention_heads", "hidden_size": "d_model"}
def __init__(
self,
vocab_size=10000,
decoder_layers=6,
decoder_ffn_dim=2048,
decoder_attention_heads=4,
decoder_layerdrop=0.0,
use_cache=True,
activation_function="relu",
d_model=256,
dropout=0.1,
attention_dropout=0.0,
activation_dropout=0.0,
init_std=0.02,
decoder_start_token_id=2,
scale_embedding=True,
pad_token_id=1,
bos_token_id=0,
eos_token_id=2,
max_target_positions=1024,
**kwargs,
):
self.vocab_size = vocab_size
self.d_model = d_model
self.decoder_ffn_dim = decoder_ffn_dim
self.decoder_layers = decoder_layers
self.decoder_attention_heads = decoder_attention_heads
self.dropout = dropout
self.attention_dropout = attention_dropout
self.activation_dropout = activation_dropout
self.activation_function = activation_function
self.init_std = init_std
self.decoder_layerdrop = decoder_layerdrop
self.use_cache = use_cache
self.num_hidden_layers = decoder_layers
self.scale_embedding = scale_embedding # scale factor will be sqrt(d_model) if True
self.max_target_positions = max_target_positions
super().__init__(
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
decoder_start_token_id=decoder_start_token_id,
**kwargs,
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 46,207 | src/transformers/models/speech_to_text_2/modeling_speech_to_text_2.py | # coding=utf-8
# Copyright 2021 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch Speech2Text2 model."""
import copy
import math
import random
from typing import Optional, Tuple, Union
import torch
from torch import nn
from torch.nn import CrossEntropyLoss
from ...activations import ACT2FN
from ...modeling_outputs import BaseModelOutputWithPastAndCrossAttentions, CausalLMOutputWithCrossAttentions
from ...modeling_utils import PreTrainedModel
from ...utils import add_start_docstrings, logging, replace_return_docstrings
from .configuration_speech_to_text_2 import Speech2Text2Config
logger = logging.get_logger(__name__)
_CONFIG_FOR_DOC = "Speech2Text2Config"
_CHECKPOINT_FOR_DOC = "facebook/s2t-wav2vec2-large-en-de"
SPEECH_TO_TEXT_2_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/s2t-wav2vec2-large-en-de",
# See all Speech2Text2 models at https://huggingface.co/models?filter=speech2text2
]
# Copied from transformers.models.bart.modeling_bart._make_causal_mask
def _make_causal_mask(input_ids_shape: torch.Size, dtype: torch.dtype, past_key_values_length: int = 0):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz, tgt_len = input_ids_shape
mask = torch.full((tgt_len, tgt_len), torch.tensor(torch.finfo(dtype).min))
mask_cond = torch.arange(mask.size(-1))
mask.masked_fill_(mask_cond < (mask_cond + 1).view(mask.size(-1), 1), 0)
mask = mask.to(dtype)
if past_key_values_length > 0:
mask = torch.cat([torch.zeros(tgt_len, past_key_values_length, dtype=dtype), mask], dim=-1)
return mask[None, None, :, :].expand(bsz, 1, tgt_len, tgt_len + past_key_values_length)
# Copied from transformers.models.bart.modeling_bart._expand_mask
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
bsz, src_len = mask.size()
tgt_len = tgt_len if tgt_len is not None else src_len
expanded_mask = mask[:, None, None, :].expand(bsz, 1, tgt_len, src_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.to(torch.bool), torch.finfo(dtype).min)
# Copied from transformers.models.speech_to_text.modeling_speech_to_text.Speech2TextSinusoidalPositionalEmbedding with Speech2Text->Speech2Text2
class Speech2Text2SinusoidalPositionalEmbedding(nn.Module):
"""This module produces sinusoidal positional embeddings of any length."""
def __init__(self, num_positions: int, embedding_dim: int, padding_idx: Optional[int] = None):
super().__init__()
self.offset = 2
self.embedding_dim = embedding_dim
self.padding_idx = padding_idx
self.make_weights(num_positions + self.offset, embedding_dim, padding_idx)
def make_weights(self, num_embeddings: int, embedding_dim: int, padding_idx: Optional[int] = None):
emb_weights = self.get_embedding(num_embeddings, embedding_dim, padding_idx)
if hasattr(self, "weights"):
# in forward put the weights on the correct dtype and device of the param
emb_weights = emb_weights.to(dtype=self.weights.dtype, device=self.weights.device)
self.weights = nn.Parameter(emb_weights)
self.weights.requires_grad = False
self.weights.detach_()
@staticmethod
def get_embedding(num_embeddings: int, embedding_dim: int, padding_idx: Optional[int] = None):
"""
Build sinusoidal embeddings. This matches the implementation in tensor2tensor, but differs slightly from the
description in Section 3.5 of "Attention Is All You Need".
"""
half_dim = embedding_dim // 2
emb = math.log(10000) / (half_dim - 1)
emb = torch.exp(torch.arange(half_dim, dtype=torch.float) * -emb)
emb = torch.arange(num_embeddings, dtype=torch.float).unsqueeze(1) * emb.unsqueeze(0)
emb = torch.cat([torch.sin(emb), torch.cos(emb)], dim=1).view(num_embeddings, -1)
if embedding_dim % 2 == 1:
# zero pad
emb = torch.cat([emb, torch.zeros(num_embeddings, 1)], dim=1)
if padding_idx is not None:
emb[padding_idx, :] = 0
return emb.to(torch.get_default_dtype())
@torch.no_grad()
def forward(self, input_ids: torch.Tensor, past_key_values_length: int = 0):
bsz, seq_len = input_ids.size()
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = self.create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length).to(
input_ids.device
)
# expand embeddings if needed
max_pos = self.padding_idx + 1 + seq_len
if max_pos > self.weights.size(0):
self.make_weights(max_pos + self.offset, self.embedding_dim, self.padding_idx)
return self.weights.index_select(0, position_ids.view(-1)).view(bsz, seq_len, -1).detach()
def create_position_ids_from_input_ids(
self, input_ids: torch.Tensor, padding_idx: int, past_key_values_length: Optional[int] = 0
):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding
symbols are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
# Copied from transformers.models.bart.modeling_bart.BartAttention with Bart->Speech2Text2
class Speech2Text2Attention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
# `past_key_value[0].shape[2] == key_value_states.shape[1]`
# is checking that the `sequence_length` of the `past_key_value` is the same as
# the provided `key_value_states` to support prefix tuning
if (
is_cross_attention
and past_key_value is not None
and past_key_value[0].shape[2] == key_value_states.shape[1]
):
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.reshape(*proj_shape)
value_states = value_states.reshape(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz * self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned across GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
class Speech2Text2DecoderLayer(nn.Module):
def __init__(self, config: Speech2Text2Config):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = Speech2Text2Attention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.self_attn_layer_norm = nn.LayerNorm(self.embed_dim)
if config.is_decoder:
self.encoder_attn = Speech2Text2Attention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
)
self.encoder_attn_layer_norm = nn.LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, config.decoder_ffn_dim)
self.fc2 = nn.Linear(config.decoder_ffn_dim, self.embed_dim)
self.final_layer_norm = nn.LayerNorm(self.embed_dim)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
cross_attn_layer_head_mask: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
output_attentions: Optional[bool] = False,
use_cache: Optional[bool] = True,
):
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(seq_len, batch, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
encoder_hidden_states (`torch.FloatTensor`):
cross attention input to the layer of shape `(seq_len, batch, embed_dim)`
encoder_attention_mask (`torch.FloatTensor`): encoder attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
cross_attn_layer_head_mask (`torch.FloatTensor`): mask for cross-attention heads in a given layer of
size *(decoder_attention_heads,)*.
past_key_value (`Tuple(torch.FloatTensor)`): cached past key and value projection states
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.self_attn_layer_norm(hidden_states)
# Cross-Attention Block
cross_attn_present_key_value = None
cross_attn_weights = None
if encoder_hidden_states is not None:
residual = hidden_states
# cross_attn cached key/values tuple is at positions 3,4 of present_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
hidden_states, cross_attn_weights, cross_attn_present_key_value = self.encoder_attn(
hidden_states=hidden_states,
key_value_states=encoder_hidden_states,
attention_mask=encoder_attention_mask,
layer_head_mask=cross_attn_layer_head_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.encoder_attn_layer_norm(hidden_states)
# add cross-attn to positions 3,4 of present_key_value tuple
present_key_value = present_key_value + cross_attn_present_key_value
# Fully Connected
residual = hidden_states
hidden_states = self.activation_fn(self.fc1(hidden_states))
hidden_states = nn.functional.dropout(hidden_states, p=self.activation_dropout, training=self.training)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights, cross_attn_weights)
if use_cache:
outputs += (present_key_value,)
return outputs
class Speech2Text2PreTrainedModel(PreTrainedModel):
config_class = Speech2Text2Config
base_model_prefix = "model"
supports_gradient_checkpointing = True
def _init_weights(self, module):
std = self.config.init_std
if isinstance(module, (nn.Linear, nn.Conv1d)):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, Speech2Text2Decoder):
module.gradient_checkpointing = value
SPEECH_TO_TEXT_2_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`Speech2Text2Config`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
class Speech2Text2Decoder(Speech2Text2PreTrainedModel):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`Speech2Text2DecoderLayer`]
Args:
config: Speech2Text2Config
embed_tokens (nn.Embedding): output embedding
"""
def __init__(self, config: Speech2Text2Config):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.decoder_layerdrop
self.padding_idx = config.pad_token_id
self.max_target_positions = config.max_target_positions
self.embed_scale = math.sqrt(config.d_model) if config.scale_embedding else 1.0
self.embed_tokens = nn.Embedding(config.vocab_size, config.d_model, self.padding_idx)
self.embed_positions = Speech2Text2SinusoidalPositionalEmbedding(
self.max_target_positions,
config.d_model,
self.padding_idx,
)
self.layers = nn.ModuleList([Speech2Text2DecoderLayer(config) for _ in range(config.decoder_layers)])
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
def _prepare_decoder_attention_mask(self, attention_mask, input_shape, inputs_embeds, past_key_values_length):
# create causal mask
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
combined_attention_mask = None
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(
input_shape, inputs_embeds.dtype, past_key_values_length=past_key_values_length
).to(inputs_embeds.device)
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
expanded_attn_mask = _expand_mask(attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1])
combined_attention_mask = (
expanded_attn_mask if combined_attention_mask is None else expanded_attn_mask + combined_attention_mask
)
return combined_attention_mask
def forward(
self,
input_ids=None,
attention_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
head_mask=None,
cross_attn_head_mask=None,
past_key_values=None,
inputs_embeds=None,
use_cache=None,
output_attentions=None,
output_hidden_states=None,
return_dict=None,
):
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`Speech2Text2Tokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, encoder_sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
of the decoder.
encoder_attention_mask (`torch.LongTensor` of shape `(batch_size, encoder_sequence_length)`, *optional*):
Mask to avoid performing cross-attention on padding tokens indices of encoder input_ids. Mask values
selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in encoder to avoid performing cross-attention
on hidden heads. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`. inputs_embeds (`torch.FloatTensor` of
shape `(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing
`input_ids` you can choose to directly pass an embedded representation. This is useful if you want more
control over how to convert `input_ids` indices into associated vectors than the model's internal
embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# retrieve input_ids and inputs_embeds
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if inputs_embeds is None:
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
attention_mask = self._prepare_decoder_attention_mask(
attention_mask, input_shape, inputs_embeds, past_key_values_length
)
# expand encoder attention mask
if encoder_hidden_states is not None and encoder_attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
encoder_attention_mask = _expand_mask(encoder_attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1])
# embed positions
positions = self.embed_positions(input_ids, past_key_values_length=past_key_values_length)
hidden_states = inputs_embeds + positions
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
next_decoder_cache = () if use_cache else None
# check if head_mask/cross_attn_head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
if attn_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
dropout_probability = random.uniform(0, 1)
if self.training and (dropout_probability < self.layerdrop):
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning(
"`use_cache = True` is incompatible with gradient checkpointing. Setting `use_cache ="
" False`..."
)
use_cache = False
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, output_attentions, use_cache)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
attention_mask,
encoder_hidden_states,
encoder_attention_mask,
head_mask[idx] if head_mask is not None else None,
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(
cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None
),
past_key_value=past_key_value,
output_attentions=output_attentions,
use_cache=use_cache,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[3 if output_attentions else 1],)
if output_attentions:
all_self_attns += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
next_cache = next_decoder_cache if use_cache else None
if not return_dict:
return tuple(
v
for v in [hidden_states, next_cache, all_hidden_states, all_self_attns, all_cross_attentions]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_cache,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attentions,
)
@add_start_docstrings(
"The Speech2Text2 Model with a language modeling head. Can be used for summarization.",
SPEECH_TO_TEXT_2_START_DOCSTRING,
)
class Speech2Text2DecoderWrapper(Speech2Text2PreTrainedModel):
"""
This wrapper class is a helper class to correctly load pretrained checkpoints when the causal language model is
used in combination with the [`EncoderDecoderModel`] framework.
"""
def __init__(self, config):
super().__init__(config)
self.decoder = Speech2Text2Decoder(config)
def forward(self, *args, **kwargs):
return self.decoder(*args, **kwargs)
@add_start_docstrings(
"The Speech2Text2 Decoder with a language modeling head. Can be used as the decoder part of"
" [`EncoderDecoderModel`] and [`SpeechEncoderDecoder`].",
SPEECH_TO_TEXT_2_START_DOCSTRING,
)
class Speech2Text2ForCausalLM(Speech2Text2PreTrainedModel):
_keys_to_ignore_on_load_missing = ["lm_head.weight"]
def __init__(self, config):
config = copy.deepcopy(config)
config.is_decoder = True
config.is_encoder_decoder = False
super().__init__(config)
self.model = Speech2Text2DecoderWrapper(config)
self.lm_head = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.model.decoder.embed_tokens
def set_input_embeddings(self, value):
self.model.decoder.embed_tokens = value
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def set_decoder(self, decoder):
self.model.decoder = decoder
def get_decoder(self):
return self.model.decoder
@replace_return_docstrings(output_type=CausalLMOutputWithCrossAttentions, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.FloatTensor], CausalLMOutputWithCrossAttentions]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`Speech2Text2Tokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention
if the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used
in the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`. The two additional
tensors are only required when the model is used as a decoder in a Sequence to Sequence model.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
Returns:
Example:
```python
>>> from transformers import (
... SpeechEncoderDecoderModel,
... Speech2Text2ForCausalLM,
... Wav2Vec2Model,
... Speech2Text2Config,
... Wav2Vec2Config,
... Wav2Vec2FeatureExtractor,
... Speech2Text2Tokenizer,
... )
>>> from datasets import load_dataset
>>> feature_extractor = Wav2Vec2FeatureExtractor()
>>> tokenizer = Speech2Text2Tokenizer.from_pretrained("facebook/s2t-wav2vec2-large-en-de")
>>> encoder = Wav2Vec2Model(Wav2Vec2Config())
>>> decoder = Speech2Text2ForCausalLM(Speech2Text2Config())
>>> # init random speech2text model
>>> model = SpeechEncoderDecoderModel(encoder=encoder, decoder=decoder)
>>> model.config.pad_token_id = tokenizer.pad_token_id
>>> model.config.decoder_start_token_id = tokenizer.bos_token_id
>>> # pre-process inputs and labels
>>> ds = load_dataset("hf-internal-testing/librispeech_asr_dummy", "clean", split="validation")
>>> inputs = feature_extractor(
... ds[0]["audio"]["array"], sampling_rate=ds[0]["audio"]["sampling_rate"], return_tensors="pt"
... )
>>> input_values = inputs.input_values
>>> decoder_input_ids = tokenizer(ds[0]["text"], return_tensors="pt").input_ids
>>> # compute loss
>>> loss = model(inputs=input_values, labels=decoder_input_ids).loss
>>> # backprop loss
>>> loss.backward() # doctest: +IGNORE_RESULT
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# decoder outputs consists of (dec_features, layer_state, dec_hidden, dec_attn)
outputs = self.model.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
head_mask=head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
logits = self.lm_head(outputs[0])
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[1:]
return (loss,) + output if loss is not None else output
return CausalLMOutputWithCrossAttentions(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
def prepare_inputs_for_generation(
self, input_ids, past_key_values=None, attention_mask=None, use_cache=None, **kwargs
):
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_ids.shape)
if past_key_values:
input_ids = input_ids[:, -1:]
# first step, decoder_cached_states are empty
return {
"input_ids": input_ids, # encoder_outputs is defined. input_ids not needed
"attention_mask": attention_mask,
"past_key_values": past_key_values,
"use_cache": use_cache,
}
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
|
27182812/ChatGLM-LLaMA-chinese-insturct | 9,211 | src/transformers/models/speech_to_text_2/tokenization_speech_to_text_2.py | # coding=utf-8
# Copyright 2021 The Facebook Inc. and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization class for Speech2Text2."""
import json
import os
from typing import Dict, List, Optional, Tuple
from ...tokenization_utils import PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {
"vocab_file": "vocab.json",
"tokenizer_config_file": "tokenizer_config.json",
"merges_file": "merges.txt",
}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"facebook/s2t-wav2vec2-large-en-de": (
"https://huggingface.co/facebook/s2t-wav2vec2-large-en-de/resolve/main/vocab.json"
),
},
"tokenizer_config_file": {
"facebook/s2t-wav2vec2-large-en-de": (
"https://huggingface.co/facebook/s2t-wav2vec2-large-en-de/resolve/main/tokenizer_config.json"
),
},
"merges_file": {
"facebook/s2t-wav2vec2-large-en-de": (
"https://huggingface.co/facebook/s2t-wav2vec2-large-en-de/resolve/main/merges.txt"
),
},
}
BPE_TOKEN_MERGES = "</w>"
BPE_TOKEN_VOCAB = "@@ "
def get_pairs(word):
"""
Return set of symbol pairs in a word. word is represented as tuple of symbols (symbols being variable-length
strings)
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
return pairs
# Speech2Text2 has no max input length
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"facebook/s2t-wav2vec2-large-en-de": 1024}
class Speech2Text2Tokenizer(PreTrainedTokenizer):
"""
Constructs a Speech2Text2Tokenizer.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains some of the main methods. Users should refer to
the superclass for more information regarding such methods.
Args:
vocab_file (`str`):
File containing the vocabulary.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sentence token.
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sentence token.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
**kwargs
Additional keyword arguments passed along to [`PreTrainedTokenizer`]
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
vocab_file,
bos_token="<s>",
pad_token="<pad>",
eos_token="</s>",
unk_token="<unk>",
do_lower_case=False,
merges_file=None,
**kwargs,
):
super().__init__(
unk_token=unk_token,
bos_token=bos_token,
eos_token=eos_token,
pad_token=pad_token,
do_lower_case=do_lower_case,
**kwargs,
)
self.do_lower_case = do_lower_case
with open(vocab_file, encoding="utf-8") as vocab_handle:
self.encoder = json.load(vocab_handle)
self.decoder = {v: k for k, v in self.encoder.items()}
if merges_file is None:
logger.info(f"No merges files provided. {self.__class__.__name__} can only be used for decoding.")
self.bpe_ranks = None
self.cache = None
else:
with open(merges_file, encoding="utf-8") as merges_handle:
merges = merges_handle.read().split("\n")[:-1]
merges = [tuple(merge.split()[:2]) for merge in merges]
self.bpe_ranks = dict(zip(merges, range(len(merges))))
self.cache = {}
@property
def vocab_size(self) -> int:
return len(self.decoder)
def get_vocab(self) -> Dict:
return dict(self.encoder, **self.added_tokens_encoder)
def bpe(self, token):
word = tuple(token[:-1]) + (token[-1] + BPE_TOKEN_MERGES,)
if token in self.cache:
return self.cache[token]
pairs = get_pairs(word)
if not pairs:
return token
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = " ".join(word)
if word == "\n " + BPE_TOKEN_MERGES:
word = "\n" + BPE_TOKEN_MERGES
if word.endswith(BPE_TOKEN_MERGES):
word = word.replace(BPE_TOKEN_MERGES, "")
word = word.replace(" ", BPE_TOKEN_VOCAB)
self.cache[token] = word
return word
def _tokenize(self, text):
"""Tokenize a string."""
if self.bpe_ranks is None:
raise ValueError(
"This tokenizer was instantiated without a `merges.txt` file, so"
" that it can only be used for decoding, not for encoding."
"Make sure to provide `merges.txt` file at instantiation to enable "
"encoding."
)
if self.do_lower_case:
text = text.lower()
text = text.split()
split_tokens = []
for token in text:
if token:
split_tokens.extend(list(self.bpe(token).split(" ")))
return split_tokens
def _convert_token_to_id(self, token: str) -> int:
"""Converts a token (str) in an index (integer) using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index: int) -> str:
"""Converts an index (integer) in a token (str) using the vocab."""
result = self.decoder.get(index, self.unk_token)
return result
def convert_tokens_to_string(self, tokens: List[str]) -> str:
"""
Converts a list of output tokens into a single string.
"""
# combine tokens
string = " ".join(tokens)
# make sure @@ tokens are concatenated
string = "".join(string.split(BPE_TOKEN_VOCAB))
return string
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
merges_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
with open(vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
index = 0
if self.bpe_ranks is None:
return (vocab_file,)
with open(merges_file, "w", encoding="utf-8") as writer:
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merges_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return (vocab_file, merges_file)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 4,789 | src/transformers/models/speech_to_text_2/processing_speech_to_text_2.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Speech processor class for Speech2Text2
"""
import warnings
from contextlib import contextmanager
from ...processing_utils import ProcessorMixin
class Speech2Text2Processor(ProcessorMixin):
r"""
Constructs a Speech2Text2 processor which wraps a Speech2Text2 feature extractor and a Speech2Text2 tokenizer into
a single processor.
[`Speech2Text2Processor`] offers all the functionalities of [`AutoFeatureExtractor`] and [`Speech2Text2Tokenizer`].
See the [`~Speech2Text2Processor.__call__`] and [`~Speech2Text2Processor.decode`] for more information.
Args:
feature_extractor (`AutoFeatureExtractor`):
An instance of [`AutoFeatureExtractor`]. The feature extractor is a required input.
tokenizer (`Speech2Text2Tokenizer`):
An instance of [`Speech2Text2Tokenizer`]. The tokenizer is a required input.
"""
feature_extractor_class = "AutoFeatureExtractor"
tokenizer_class = "Speech2Text2Tokenizer"
def __init__(self, feature_extractor, tokenizer):
super().__init__(feature_extractor, tokenizer)
self.current_processor = self.feature_extractor
self._in_target_context_manager = False
def __call__(self, *args, **kwargs):
"""
When used in normal mode, this method forwards all its arguments to AutoFeatureExtractor's
[`~AutoFeatureExtractor.__call__`] and returns its output. If used in the context
[`~Speech2Text2Processor.as_target_processor`] this method forwards all its arguments to
Speech2Text2Tokenizer's [`~Speech2Text2Tokenizer.__call__`]. Please refer to the doctsring of the above two
methods for more information.
"""
# For backward compatibility
if self._in_target_context_manager:
return self.current_processor(*args, **kwargs)
if "raw_speech" in kwargs:
warnings.warn("Using `raw_speech` as a keyword argument is deprecated. Use `audio` instead.")
audio = kwargs.pop("raw_speech")
else:
audio = kwargs.pop("audio", None)
sampling_rate = kwargs.pop("sampling_rate", None)
text = kwargs.pop("text", None)
if len(args) > 0:
audio = args[0]
args = args[1:]
if audio is None and text is None:
raise ValueError("You need to specify either an `audio` or `text` input to process.")
if audio is not None:
inputs = self.feature_extractor(audio, *args, sampling_rate=sampling_rate, **kwargs)
if text is not None:
encodings = self.tokenizer(text, **kwargs)
if text is None:
return inputs
elif audio is None:
return encodings
else:
inputs["labels"] = encodings["input_ids"]
return inputs
def batch_decode(self, *args, **kwargs):
"""
This method forwards all its arguments to Speech2Text2Tokenizer's [`~PreTrainedTokenizer.batch_decode`]. Please
refer to the docstring of this method for more information.
"""
return self.tokenizer.batch_decode(*args, **kwargs)
def decode(self, *args, **kwargs):
"""
This method forwards all its arguments to Speech2Text2Tokenizer's [`~PreTrainedTokenizer.decode`]. Please refer
to the docstring of this method for more information.
"""
return self.tokenizer.decode(*args, **kwargs)
@contextmanager
def as_target_processor(self):
"""
Temporarily sets the tokenizer for processing the input. Useful for encoding the labels when fine-tuning
Speech2Text2.
"""
warnings.warn(
"`as_target_processor` is deprecated and will be removed in v5 of Transformers. You can process your "
"labels by using the argument `text` of the regular `__call__` method (either in the same call as "
"your audio inputs, or in a separate call."
)
self._in_target_context_manager = True
self.current_processor = self.tokenizer
yield
self.current_processor = self.feature_extractor
self._in_target_context_manager = False
|
27182812/ChatGLM-LLaMA-chinese-insturct | 58,329 | src/transformers/models/fsmt/modeling_fsmt.py | # coding=utf-8
# Copyright 2020 The Facebook AI Research Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
# Original implementation: https://github.com/pytorch/fairseq/tree/master/examples/wmt19
# Authors:
# - @alexeib Alexei Baevski
# - @edunov Sergey Edunov
# - @michaelauli Michael Auli
# - @myleott Myle Ott
# - @nng555 Nathan Ng
# - David Grangier
# - Kyra Yee
#
# Paper: Facebook FAIR's WMT19 News Translation Task Submission https://arxiv.org/abs/1907.06616
#
"""PyTorch Fairseq model, ported from https://github.com/pytorch/fairseq/tree/master/examples/wmt19"""
import math
import random
from typing import Any, Dict, List, Optional, Tuple, Union
import torch
from torch import Tensor, nn
from torch.nn import CrossEntropyLoss, LayerNorm
from ...activations import ACT2FN
from ...deepspeed import is_deepspeed_zero3_enabled
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
Seq2SeqLMOutput,
Seq2SeqModelOutput,
)
from ...modeling_utils import PreTrainedModel
from ...utils import (
add_code_sample_docstrings,
add_end_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_fsmt import FSMTConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/wmt19-ru-en"
_CONFIG_FOR_DOC = "FSMTConfig"
# See all FSMT models at https://huggingface.co/models?filter=fsmt
# Porting notes:
# this one is modeled after BartModel*
#
# Currently only translation (fairseq also has weights for LM)
#
# fairseq provides weights for ru-en, en-ru and de-en, en-de pairs. All have been ported.
# - ru-en, en-ru use asymmetric vocab
# - de-en, en-de use a merged single vocab (but the code works as if they are separate)
#
# Differences with Bart:
# - not using bos token
# - 2 separate vocabs (src and target)
# - embed weights aren't tied
# - uses a model Ensemble (but that part isn't ported/implemented yet) - so we
# aren't getting as good of a BLEU score
# - uses a projection layer at the end of the decoder
# - doesn't use final_logits_bias
# - beam search: stops as soon as num_beams == len(hypos) (whereas transformers
# is not satisfied there and will continue searching until the next cycles
# aren't promising something better), comparing BLEU scores - the transformers
# algorithm is slightly superior, therefore using the latter. But if you want
# to match fairseq outputs, you need to pass ``early_stopping=True`` to ``generate()``.
#
# SinusoidalPositionalEmbedding is slightly different from Bart's - generates
# different embeddings. This implementation is copied verbatim from fairseq with
# some small changes to make it work here.
#
# Other changes:
# - doesn't support use_cache as Bart's version does
#
#
# FSMTConfig changes with BartConfig
#
# Differences with BART:
# - src/tgt vocabs aren't shared
# - token embeddings aren't shared
# - needs a language pair
# - scale_embedding are True
#
# some unused args were removed too
#
#
# TODO:
# - port model ensemble (fs uses 4 model checkpoints)
# - solve beam search discrepancies
# docstyle-ignore
"""
Here is how to compare BLEU scores against fairseq implementation:
# en-ru
export PAIR=en-ru
export DATA_DIR=data/$PAIR
export SAVE_DIR=data/$PAIR
export BS=8
export NUM_BEAMS=50
mkdir -p $DATA_DIR
sacrebleu -t wmt19 -l $PAIR --echo src > $DATA_DIR/val.source
sacrebleu -t wmt19 -l $PAIR --echo ref > $DATA_DIR/val.target
echo $PAIR
PYTHONPATH="src:examples/seq2seq" python examples/seq2seq/run_eval.py facebook/wmt19-$PAIR $DATA_DIR/val.source $SAVE_DIR/test_translations.txt --reference_path $DATA_DIR/val.target --score_path $SAVE_DIR/test_bleu.json --bs $BS --task translation --num_beams $NUM_BEAMS
# (fairseq BLEU: 36.4 http://matrix.statmt.org/matrix/output/1914?score_id=37605)
# ru-en
export PAIR=ru-en
export DATA_DIR=data/$PAIR
export SAVE_DIR=data/$PAIR
export BS=8
export NUM_BEAMS=50
mkdir -p $DATA_DIR
sacrebleu -t wmt19 -l $PAIR --echo src > $DATA_DIR/val.source
sacrebleu -t wmt19 -l $PAIR --echo ref > $DATA_DIR/val.target
PYTHONPATH="src:examples/seq2seq" python examples/seq2seq/run_eval.py facebook/wmt19-$PAIR $DATA_DIR/val.source $SAVE_DIR/test_translations.txt --reference_path $DATA_DIR/val.target --score_path $SAVE_DIR/test_bleu.json --bs $BS --task translation --num_beams $NUM_BEAMS
# (fairseq BLEU: 41.3 http://matrix.statmt.org/matrix/output/1907?run_id=6937)
# de-en
export PAIR=de-en
export DATA_DIR=data/$PAIR
export SAVE_DIR=data/$PAIR
export BS=8
export NUM_BEAMS=50
mkdir -p $DATA_DIR
sacrebleu -t wmt19 -l $PAIR --echo src > $DATA_DIR/val.source
sacrebleu -t wmt19 -l $PAIR --echo ref > $DATA_DIR/val.target
echo $PAIR
PYTHONPATH="src:examples/seq2seq" python examples/seq2seq/run_eval.py facebook/wmt19-$PAIR $DATA_DIR/val.source $SAVE_DIR/test_translations.txt --reference_path $DATA_DIR/val.target --score_path $SAVE_DIR/test_bleu.json --bs $BS --task translation --num_beams $NUM_BEAMS
# (fairseq BLEU: 42.3 http://matrix.statmt.org/matrix/output/1902?run_id=6750)
# en-de
export PAIR=en-de
export DATA_DIR=data/$PAIR
export SAVE_DIR=data/$PAIR
export BS=8
mkdir -p $DATA_DIR
sacrebleu -t wmt19 -l $PAIR --echo src > $DATA_DIR/val.source
sacrebleu -t wmt19 -l $PAIR --echo ref > $DATA_DIR/val.target
echo $PAIR
PYTHONPATH="src:examples/seq2seq" python examples/seq2seq/run_eval.py facebook/wmt19-$PAIR $DATA_DIR/val.source $SAVE_DIR/test_translations.txt --reference_path $DATA_DIR/val.target --score_path $SAVE_DIR/test_bleu.json --bs $BS --task translation --num_beams $NUM_BEAMS
# (fairseq BLEU: 43.1 http://matrix.statmt.org/matrix/output/1909?run_id=6862)
"""
FSMT_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`FSMTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
FSMT_GENERATION_EXAMPLE = r"""
Translation example::
```python
>>> from transformers import AutoTokenizer, FSMTForConditionalGeneration
>>> mname = "facebook/wmt19-ru-en"
>>> model = FSMTForConditionalGeneration.from_pretrained(mname)
>>> tokenizer = AutoTokenizer.from_pretrained(mname)
>>> src_text = "Машинное обучение - это здорово, не так ли?"
>>> input_ids = tokenizer(src_text, return_tensors="pt").input_ids
>>> outputs = model.generate(input_ids, num_beams=5, num_return_sequences=3)
>>> tokenizer.decode(outputs[0], skip_special_tokens=True)
"Machine learning is great, isn't it?"
```
"""
FSMT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`FSTMTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
decoder_input_ids (`torch.LongTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Indices of decoder input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are decoder input IDs?](../glossary#decoder-input-ids)
FSMT uses the `eos_token_id` as the starting token for `decoder_input_ids` generation. If `past_key_values`
is used, optionally only the last `decoder_input_ids` have to be input (see `past_key_values`).
decoder_attention_mask (`torch.BoolTensor` of shape `(batch_size, target_sequence_length)`, *optional*):
Default behavior: generate a tensor that ignores pad tokens in `decoder_input_ids`. Causal mask will also
be used by default.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
decoder_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the decoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules in the decoder. Mask values selected in `[0,
1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
encoder_outputs (`Tuple(torch.FloatTensor)`, *optional*):
Tuple consists of (`last_hidden_state`, *optional*: `hidden_states`, *optional*: `attentions`)
`last_hidden_state` of shape `(batch_size, sequence_length, hidden_size)` is a sequence of hidden-states at
the output of the last layer of the encoder. Used in the cross-attention of the decoder.
past_key_values (`Tuple(torch.FloatTensor)` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
decoder_inputs_embeds (`torch.FloatTensor` of shape `(batch_size, target_sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `decoder_input_ids` you can choose to directly pass an embedded
representation. If `past_key_values` is used, optionally only the last `decoder_inputs_embeds` have to be
input (see `past_key_values`). This is useful if you want more control over how to convert
`decoder_input_ids` indices into associated vectors than the model's internal embedding lookup matrix.
If `decoder_input_ids` and `decoder_inputs_embeds` are both unset, `decoder_inputs_embeds` takes the value
of `inputs_embeds`.
use_cache (`bool`, *optional*, defaults to `True`):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
def invert_mask(attention_mask):
"""Turns 1->0, 0->1, False->True, True-> False"""
assert attention_mask.dim() == 2
return attention_mask.eq(0)
def triu_onnx(x, diagonal=0):
l = x.shape[0]
arange = torch.arange(l, device=x.device)
mask = arange.expand(l, l)
arange = arange.unsqueeze(-1)
if diagonal:
arange = arange + diagonal
mask = mask >= arange
return x.masked_fill(mask == 0, 0)
def _prepare_fsmt_decoder_inputs(
config,
input_ids,
decoder_input_ids=None,
decoder_padding_mask=None,
causal_mask_dtype=torch.float32,
):
"""
Prepare masks that ignore padding tokens in the decoder and a causal mask for the decoder if none are provided.
This mimics the default behavior in fairseq. To override it pass in masks. Note: this is not called during
generation
"""
pad_token_id = config.pad_token_id
if decoder_input_ids is None:
decoder_input_ids = shift_tokens_right(input_ids, pad_token_id)
bsz, tgt_len = decoder_input_ids.size()
if decoder_padding_mask is None:
decoder_padding_mask = make_padding_mask(decoder_input_ids, pad_token_id)
else:
decoder_padding_mask = invert_mask(decoder_padding_mask)
causal_mask = triu_onnx(fill_with_neg_inf(torch.zeros(tgt_len, tgt_len, dtype=causal_mask_dtype)), 1).to(
device=decoder_input_ids.device
)
return decoder_input_ids, decoder_padding_mask, causal_mask
class PretrainedFSMTModel(PreTrainedModel):
config_class = FSMTConfig
base_model_prefix = "model"
def _init_weights(self, module):
std = self.config.init_std
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, SinusoidalPositionalEmbedding):
pass
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
@property
def dummy_inputs(self):
pad_token = self.config.pad_token_id
input_ids = torch.tensor([[0, 6, 10, 4, 2], [0, 8, 12, 2, pad_token]], device=self.device)
dummy_inputs = {
"attention_mask": input_ids.ne(pad_token),
"input_ids": input_ids,
}
return dummy_inputs
def _make_linear_from_emb(emb):
vocab_size, emb_size = emb.weight.shape
lin_layer = nn.Linear(vocab_size, emb_size, bias=False)
lin_layer.weight.data = emb.weight.data
return lin_layer
# Helper Functions, mostly for making masks
def _check_shapes(shape_1, shape2):
if shape_1 != shape2:
raise AssertionError(f"shape mismatch: {shape_1} != {shape2}")
def shift_tokens_right(input_ids, pad_token_id):
"""Shift input ids one token to the right, and wrap the last non pad token (usually <eos>)."""
# replace possible -100 values in labels by `pad_token_id`
input_ids.masked_fill_(input_ids == -100, pad_token_id)
prev_output_tokens = input_ids.clone()
index_of_eos = (input_ids.ne(pad_token_id).sum(dim=1) - 1).unsqueeze(-1)
prev_output_tokens[:, 0] = input_ids.gather(1, index_of_eos).squeeze()
prev_output_tokens[:, 1:] = input_ids[:, :-1]
return prev_output_tokens
def make_padding_mask(input_ids, padding_idx=1):
"""True for pad tokens"""
padding_mask = input_ids.eq(padding_idx)
if not padding_mask.any():
padding_mask = None
return padding_mask
# Helper Modules
class EncoderLayer(nn.Module):
def __init__(self, config: FSMTConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = Attention(self.embed_dim, config.encoder_attention_heads, dropout=config.attention_dropout)
self.self_attn_layer_norm = LayerNorm(self.embed_dim)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.fc1 = nn.Linear(self.embed_dim, config.encoder_ffn_dim)
self.fc2 = nn.Linear(config.encoder_ffn_dim, self.embed_dim)
self.final_layer_norm = LayerNorm(self.embed_dim)
def forward(self, x, encoder_padding_mask, layer_head_mask, output_attentions=False):
"""
Args:
x (`torch.Tensor`): input to the layer of shape *(seq_len, batch, embed_dim)*
encoder_padding_mask (`torch.ByteTensor`): binary ByteTensor of shape
*(batch, src_len)* where padding elements are indicated by `1`.
for t_tgt, t_src is excluded (or masked out), =0 means it is
included in attention
layer_head_mask (`torch.FloatTensor`): mask for attention heads in a given layer of size
*(config.encoder_attention_heads,)*.
Returns:
encoded output of shape *(seq_len, batch, embed_dim)*
"""
residual = x
x, attn_weights = self.self_attn(
query=x,
key=x,
key_padding_mask=encoder_padding_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
x = nn.functional.dropout(x, p=self.dropout, training=self.training)
x = residual + x
x = self.self_attn_layer_norm(x)
residual = x
x = self.activation_fn(self.fc1(x))
x = nn.functional.dropout(x, p=self.activation_dropout, training=self.training)
x = self.fc2(x)
x = nn.functional.dropout(x, p=self.dropout, training=self.training)
x = residual + x
x = self.final_layer_norm(x)
return x, attn_weights
class FSMTEncoder(nn.Module):
"""
Transformer encoder consisting of *config.encoder_layers* self attention layers. Each layer is a [`EncoderLayer`].
Args:
config: FSMTConfig
"""
def __init__(self, config: FSMTConfig, embed_tokens):
super().__init__()
self.dropout = config.dropout
self.layerdrop = config.encoder_layerdrop
self.padding_idx = embed_tokens.padding_idx
self.embed_tokens = embed_tokens
embed_dim = embed_tokens.embedding_dim
self.embed_scale = math.sqrt(embed_dim) if config.scale_embedding else 1.0
self.embed_positions = SinusoidalPositionalEmbedding(
config.max_position_embeddings + self.padding_idx + 1, embed_dim, self.padding_idx
)
self.layers = nn.ModuleList(
[EncoderLayer(config) for _ in range(config.encoder_layers)]
) # type: List[EncoderLayer]
def forward(
self,
input_ids: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
inputs_embeds: torch.Tensor = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
"""
Args:
input_ids (`torch.LongTensor`): tokens in the source language of shape
*(batch, src_len)*
attention_mask (`torch.LongTensor`): indicating which indices are padding tokens
inputs_embeds (`torch.FloatTensor`):
embedding vectors of shape *(batch, src_len, embed_dim)*
head_mask (`torch.Tensor` of shape `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
Returns:
BaseModelOutput or Tuple comprised of:
- **x** (`torch.Tensor`): the last encoder layer's output of shape *(src_len, batch, embed_dim)*
- **encoder_states** (`Tuple(torch.FloatTensor`)): all intermediate hidden states of shape *(src_len,
batch, embed_dim)*. Only populated if *output_hidden_states:* is True.
- **all_attentions** (`Tuple(torch.FloatTensor`)): Attention weights for each layer.
During training might not be of length n_layers because of layer dropout.
"""
# check attention mask and invert
if attention_mask is not None:
attention_mask = invert_mask(attention_mask)
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
inputs_embeds = self.embed_tokens(input_ids) * self.embed_scale
embed_pos = self.embed_positions(input_ids)
elif inputs_embeds is not None:
inputs_embeds = inputs_embeds * self.embed_scale
# We assume zeros hidden states correspond to padding tokens
# and create `position_ids` where inputs_embeds[:, :, 0] == 0
position_ids = inputs_embeds[:, :, 0].masked_fill(
inputs_embeds[:, :, 0].eq(0), self.embed_positions.padding_idx
)
embed_pos = self.embed_positions(position_ids)
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
x = inputs_embeds + embed_pos
x = nn.functional.dropout(x, p=self.dropout, training=self.training)
# B x T x C -> T x B x C
x = x.transpose(0, 1)
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
# check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
assert head_mask.size()[0] == (
len(self.layers)
), f"The head_mask should be specified for {len(self.layers)} layers, but it is for {head_mask.size()[0]}."
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
x = x.transpose(0, 1) # T x B x C -> B x T x C
encoder_states += (x,)
x = x.transpose(0, 1) # B x T x C -> T x B x C
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
dropout_probability = random.uniform(0, 1)
if self.training and (dropout_probability < self.layerdrop): # skip the layer
attn = None
else:
x, attn = encoder_layer(
x,
attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
output_attentions=output_attentions,
)
if output_attentions:
all_attentions = all_attentions + (attn,)
# T x B x C -> B x T x C
x = x.transpose(0, 1)
if output_hidden_states:
encoder_states += (x,)
if not return_dict:
return tuple(v for v in [x, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(last_hidden_state=x, hidden_states=encoder_states, attentions=all_attentions)
class DecoderLayer(nn.Module):
def __init__(self, config: FSMTConfig):
super().__init__()
self.embed_dim = config.d_model
self.self_attn = Attention(
embed_dim=self.embed_dim,
num_heads=config.decoder_attention_heads,
dropout=config.attention_dropout,
)
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.activation_dropout = config.activation_dropout
self.self_attn_layer_norm = LayerNorm(self.embed_dim)
self.encoder_attn = Attention(
self.embed_dim,
config.decoder_attention_heads,
dropout=config.attention_dropout,
encoder_decoder_attention=True,
)
self.encoder_attn_layer_norm = LayerNorm(self.embed_dim)
self.fc1 = nn.Linear(self.embed_dim, config.decoder_ffn_dim)
self.fc2 = nn.Linear(config.decoder_ffn_dim, self.embed_dim)
self.final_layer_norm = LayerNorm(self.embed_dim)
def forward(
self,
x,
encoder_hidden_states,
encoder_attn_mask=None,
layer_state=None,
causal_mask=None,
layer_head_mask=None,
cross_attn_layer_head_mask=None,
decoder_padding_mask=None,
output_attentions=False,
):
residual = x
if layer_state is None:
layer_state = {}
# Self Attention
x, self_attn_weights = self.self_attn(
query=x,
key=x,
layer_state=layer_state, # adds keys to layer state
key_padding_mask=decoder_padding_mask,
attn_mask=causal_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
x = nn.functional.dropout(x, p=self.dropout, training=self.training)
x = residual + x
x = self.self_attn_layer_norm(x)
# Cross attention
residual = x
assert self.encoder_attn.cache_key != self.self_attn.cache_key
x, cross_attn_weights = self.encoder_attn(
query=x,
key=encoder_hidden_states,
key_padding_mask=encoder_attn_mask,
layer_state=layer_state, # mutates layer state
layer_head_mask=cross_attn_layer_head_mask,
output_attentions=output_attentions,
)
x = nn.functional.dropout(x, p=self.dropout, training=self.training)
x = residual + x
x = self.encoder_attn_layer_norm(x)
# Fully Connected
residual = x
x = self.activation_fn(self.fc1(x))
x = nn.functional.dropout(x, p=self.activation_dropout, training=self.training)
x = self.fc2(x)
x = nn.functional.dropout(x, p=self.dropout, training=self.training)
x = residual + x
x = self.final_layer_norm(x)
return (
x,
self_attn_weights,
layer_state,
cross_attn_weights,
) # layer_state = cache for decoding
class FSMTDecoder(nn.Module):
"""
Transformer decoder consisting of *config.decoder_layers* layers. Each layer is a [`DecoderLayer`]
Args:
config: FSMTConfig
embed_tokens (nn.Embedding): output embedding
"""
def __init__(self, config: FSMTConfig, embed_tokens: nn.Embedding):
super().__init__()
self.dropout = config.dropout
self.layerdrop = config.decoder_layerdrop
self.padding_idx = embed_tokens.padding_idx
self.embed_scale = math.sqrt(config.d_model) if config.scale_embedding else 1.0
self.embed_tokens = embed_tokens
embed_dim = embed_tokens.embedding_dim
self.embed_positions = SinusoidalPositionalEmbedding(
config.max_position_embeddings + self.padding_idx + 1, embed_dim, self.padding_idx
)
self.layers = nn.ModuleList(
[DecoderLayer(config) for _ in range(config.decoder_layers)]
) # type: List[DecoderLayer]
if is_deepspeed_zero3_enabled():
import deepspeed
with deepspeed.zero.GatheredParameters(self.embed_tokens.weight, modifier_rank=None):
embed_tokens_weight_shape = self.embed_tokens.weight.shape
else:
embed_tokens_weight_shape = self.embed_tokens.weight.shape
self.output_projection = nn.Linear(embed_tokens_weight_shape[1], embed_tokens_weight_shape[0], bias=False)
self.output_projection.weight = self.embed_tokens.weight
def forward(
self,
input_ids: torch.Tensor,
encoder_hidden_states: torch.Tensor,
encoder_padding_mask: torch.Tensor,
decoder_padding_mask: torch.Tensor,
decoder_causal_mask: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: bool = False,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
"""
Includes several features from "Jointly Learning to Align and Translate with Transformer Models" (Garg et al.,
EMNLP 2019).
Args:
input_ids (`torch.LongTensor` of shape `(batch, tgt_len)`):
previous decoder outputs for teacher forcing
encoder_hidden_states: output from the encoder, used for
encoder-side attention
encoder_padding_mask: for ignoring pad tokens
past_key_values (dict or None): dictionary used for storing state during generation
head_mask (`torch.Tensor` of shape `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
cross_attn_head_mask (`torch.Tensor` of shape `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the cross-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
Returns:
BaseModelOutputWithPast or tuple:
- the decoder's features of shape *(batch, tgt_len, embed_dim)*
- the cache
- hidden states
- attentions
"""
# check attention mask and invert
if encoder_padding_mask is not None:
encoder_padding_mask = invert_mask(encoder_padding_mask)
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
# embed positions
positions = self.embed_positions(input_ids)
if use_cache:
input_ids = input_ids[:, -1:]
positions = positions[:, -1:] # happens after we embed them
x = self.embed_tokens(input_ids) * self.embed_scale
elif inputs_embeds is not None:
# We assume zeros hidden states correspond to padding tokens
# and create `position_ids` where inputs_embeds[:, :, 0] == 0
position_ids = inputs_embeds[:, :, 0].masked_fill(
inputs_embeds[:, :, 0].eq(0), self.embed_positions.padding_idx
)
positions = self.embed_positions(position_ids)
x = inputs_embeds * self.embed_scale
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
x += positions
x = nn.functional.dropout(x, p=self.dropout, training=self.training)
# Convert to FSMT output format: (seq_len, BS, model_dim) -> (BS, seq_len, model_dim)
x = x.transpose(0, 1)
encoder_hidden_states = encoder_hidden_states.transpose(0, 1)
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
all_cross_attns = () if output_attentions else None
next_decoder_cache = []
# check if head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask, cross_attn_head_mask], ["head_mask", "cross_attn_head_mask"]):
if attn_mask is not None:
assert attn_mask.size()[0] == (len(self.layers)), (
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
x = x.transpose(0, 1)
all_hidden_states += (x,)
x = x.transpose(0, 1)
dropout_probability = random.uniform(0, 1)
if self.training and (dropout_probability < self.layerdrop):
continue
layer_state = past_key_values[idx] if past_key_values is not None else None
x, layer_self_attn, layer_past, layer_cross_attn = decoder_layer(
x,
encoder_hidden_states,
encoder_attn_mask=encoder_padding_mask,
decoder_padding_mask=decoder_padding_mask,
layer_state=layer_state,
causal_mask=decoder_causal_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
cross_attn_layer_head_mask=(cross_attn_head_mask[idx] if cross_attn_head_mask is not None else None),
output_attentions=output_attentions,
)
if use_cache:
next_decoder_cache.append(layer_past.copy())
if output_attentions:
all_self_attns += (layer_self_attn,)
all_cross_attns += (layer_cross_attn,)
# add hidden states from the last decoder layer
if output_hidden_states:
x = x.transpose(0, 1)
all_hidden_states += (x,)
x = x.transpose(0, 1)
# Convert to standard output format: (seq_len, BS, model_dim) -> (BS, seq_len, model_dim)
x = x.transpose(0, 1)
encoder_hidden_states = encoder_hidden_states.transpose(0, 1)
x = self.output_projection(x)
next_cache = next_decoder_cache if use_cache else None
if not return_dict:
return tuple(
v for v in [x, next_cache, all_hidden_states, all_self_attns, all_cross_attns] if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=x,
past_key_values=next_cache,
hidden_states=all_hidden_states,
attentions=all_self_attns,
cross_attentions=all_cross_attns,
)
def _reorder_buffer(attn_cache, new_order):
for k, input_buffer_k in attn_cache.items():
if input_buffer_k is not None:
attn_cache[k] = input_buffer_k.index_select(0, new_order)
return attn_cache
class Attention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim,
num_heads,
dropout=0.0,
bias=True,
encoder_decoder_attention=False, # otherwise self_attention
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
assert self.head_dim * num_heads == self.embed_dim, "embed_dim must be divisible by num_heads"
self.scaling = self.head_dim**-0.5
self.encoder_decoder_attention = encoder_decoder_attention
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.cache_key = "encoder_decoder" if self.encoder_decoder_attention else "self"
def _shape(self, tensor, seq_len, bsz):
return tensor.contiguous().view(seq_len, bsz * self.num_heads, self.head_dim).transpose(0, 1)
def forward(
self,
query,
key: Optional[Tensor],
key_padding_mask: Optional[Tensor] = None,
layer_state: Optional[Dict[str, Optional[Tensor]]] = None,
attn_mask: Optional[Tensor] = None,
layer_head_mask: Optional[Tensor] = None,
output_attentions=False,
) -> Tuple[Tensor, Optional[Tensor]]:
"""Input shape: Time(SeqLen) x Batch x Channel"""
static_kv: bool = self.encoder_decoder_attention
tgt_len, bsz, embed_dim = query.size()
assert embed_dim == self.embed_dim
assert list(query.size()) == [tgt_len, bsz, embed_dim]
# get here for encoder decoder cause of static_kv
if layer_state is not None: # reuse k,v and encoder_padding_mask
saved_state = layer_state.get(self.cache_key, {})
if "prev_key" in saved_state and static_kv:
# previous time steps are cached - no need to recompute key and value if they are static
key = None
else:
saved_state = None
layer_state = {}
q = self.q_proj(query) * self.scaling
if static_kv:
if key is None:
k = v = None
else:
k = self.k_proj(key)
v = self.v_proj(key)
else:
k = self.k_proj(query)
v = self.v_proj(query)
q = self._shape(q, tgt_len, bsz)
if k is not None:
k = self._shape(k, -1, bsz)
if v is not None:
v = self._shape(v, -1, bsz)
if saved_state is not None:
k, v, key_padding_mask = self._use_saved_state(k, v, saved_state, key_padding_mask, static_kv, bsz)
# Update cache
layer_state[self.cache_key] = {
"prev_key": k.view(bsz, self.num_heads, -1, self.head_dim),
"prev_value": v.view(bsz, self.num_heads, -1, self.head_dim),
"prev_key_padding_mask": key_padding_mask if not static_kv else None,
}
assert k is not None
src_len = k.size(1)
attn_weights = torch.bmm(q, k.transpose(1, 2))
assert attn_weights.size() == (bsz * self.num_heads, tgt_len, src_len)
if attn_mask is not None:
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attn_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
# This is part of a workaround to get around fork/join parallelism not supporting Optional types.
if key_padding_mask is not None and key_padding_mask.dim() == 0:
key_padding_mask = None
assert key_padding_mask is None or key_padding_mask.size()[:2] == (
bsz,
src_len,
)
if key_padding_mask is not None: # don't attend to padding symbols
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
reshaped = key_padding_mask.unsqueeze(1).unsqueeze(2)
attn_weights = attn_weights.masked_fill(reshaped, torch.finfo(attn_weights.dtype).min)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
assert layer_head_mask.size() == (
self.num_heads,
), f"Head mask for a single layer should be of size {(self.num_heads,)}, but is {layer_head_mask.size()}"
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# make sure that attn_weights are included in graph
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(
attn_weights,
p=self.dropout,
training=self.training,
)
assert v is not None
attn_output = torch.bmm(attn_probs, v)
assert attn_output.size() == (bsz * self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(0, 1).contiguous().view(tgt_len, bsz, embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped
def _use_saved_state(self, k, v, saved_state, key_padding_mask, static_kv, bsz):
# saved states are stored with shape (bsz, num_heads, seq_len, head_dim)
if "prev_key" in saved_state:
_prev_key = saved_state["prev_key"]
assert _prev_key is not None
prev_key = _prev_key.view(bsz * self.num_heads, -1, self.head_dim)
if static_kv:
k = prev_key
else:
assert k is not None
k = torch.cat([prev_key, k], dim=1)
if "prev_value" in saved_state:
_prev_value = saved_state["prev_value"]
assert _prev_value is not None
prev_value = _prev_value.view(bsz * self.num_heads, -1, self.head_dim)
if static_kv:
v = prev_value
else:
assert v is not None
v = torch.cat([prev_value, v], dim=1)
assert k is not None and v is not None
prev_key_padding_mask: Optional[Tensor] = saved_state.get("prev_key_padding_mask", None)
if prev_key_padding_mask is not None:
if static_kv:
new_key_padding_mask = prev_key_padding_mask
else:
new_key_padding_mask = torch.cat([prev_key_padding_mask, key_padding_mask], dim=1)
else:
new_key_padding_mask = key_padding_mask
return k, v, new_key_padding_mask
def fill_with_neg_inf(t):
"""FP16-compatible function that fills a input_ids with -inf."""
return t.float().fill_(torch.finfo(t.dtype).min).type_as(t)
# Public API
def _get_shape(t):
return getattr(t, "shape", None)
@add_start_docstrings(
"The bare FSMT Model outputting raw hidden-states without any specific head on top.",
FSMT_START_DOCSTRING,
)
class FSMTModel(PretrainedFSMTModel):
_keys_to_ignore_on_load_missing = ["decoder.output_projection.weight"]
def __init__(self, config: FSMTConfig):
super().__init__(config)
padding_idx = config.pad_token_id
encoder_embed_tokens = nn.Embedding(config.src_vocab_size, config.d_model, padding_idx)
decoder_embed_tokens = nn.Embedding(config.tgt_vocab_size, config.d_model, padding_idx)
self.encoder = FSMTEncoder(config, encoder_embed_tokens)
self.decoder = FSMTDecoder(config, decoder_embed_tokens)
# Initialize weights and apply final processing
self.post_init()
def get_encoder(self):
return self.encoder
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(FSMT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=Seq2SeqModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[torch.FloatTensor]] = None,
past_key_values: Optional[Tuple[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
decoder_inputs_embeds: Optional[torch.FloatTensor] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], Seq2SeqModelOutput]:
if decoder_input_ids is None:
use_cache = False
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# make masks if user doesn't supply
if not use_cache and input_ids is not None:
decoder_input_ids, decoder_padding_mask, causal_mask = _prepare_fsmt_decoder_inputs(
self.config,
input_ids,
decoder_input_ids=decoder_input_ids,
decoder_padding_mask=decoder_attention_mask,
causal_mask_dtype=self.decoder.embed_tokens.weight.dtype,
)
else:
decoder_padding_mask, causal_mask = None, None
if decoder_input_ids is None and decoder_inputs_embeds is None:
raise ValueError("Make sure that `decoder_input_ids` or `decoder_inputs_embeds` are passed.")
if encoder_outputs is None:
encoder_outputs = self.encoder(
input_ids=input_ids,
attention_mask=attention_mask,
inputs_embeds=inputs_embeds,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# If the user passed a tuple for encoder_outputs, we wrap it in a BaseModelOutput when return_dict=False
elif return_dict and not isinstance(encoder_outputs, BaseModelOutput):
encoder_outputs = BaseModelOutput(
last_hidden_state=encoder_outputs[0],
hidden_states=encoder_outputs[1] if len(encoder_outputs) > 1 else None,
attentions=encoder_outputs[2] if len(encoder_outputs) > 2 else None,
)
# decoder outputs consists of (dec_features, layer_state, dec_hidden, dec_attn)
decoder_outputs = self.decoder(
decoder_input_ids,
encoder_outputs[0],
attention_mask,
decoder_padding_mask,
decoder_causal_mask=causal_mask,
inputs_embeds=decoder_inputs_embeds,
head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs + encoder_outputs
return Seq2SeqModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
decoder_hidden_states=decoder_outputs.hidden_states,
decoder_attentions=decoder_outputs.attentions,
cross_attentions=decoder_outputs.cross_attentions,
encoder_last_hidden_state=encoder_outputs.last_hidden_state,
encoder_hidden_states=encoder_outputs.hidden_states,
encoder_attentions=encoder_outputs.attentions,
)
def get_input_embeddings(self):
return self.encoder.embed_tokens
def set_input_embeddings(self, value):
self.encoder.embed_tokens = value
def get_output_embeddings(self):
return self.decoder.embed_tokens
def set_output_embeddings(self, value):
self.decoder.embed_tokens = value
@add_start_docstrings(
"The FSMT Model with a language modeling head. Can be used for summarization.", FSMT_START_DOCSTRING
)
class FSMTForConditionalGeneration(PretrainedFSMTModel):
base_model_prefix = "model"
_keys_to_ignore_on_load_missing = [
"model.encoder.embed_positions.weight",
"model.decoder.embed_positions.weight",
"decoder.output_projection.weight",
]
_keys_to_ignore_on_save = [
"model.encoder.embed_positions.weight",
"model.decoder.embed_positions.weight",
]
def __init__(self, config: FSMTConfig):
super().__init__(config)
base_model = FSMTModel(config)
self.model = base_model
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(FSMT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=Seq2SeqLMOutput, config_class=_CONFIG_FOR_DOC)
@add_end_docstrings(FSMT_GENERATION_EXAMPLE)
def forward(
self,
input_ids: torch.LongTensor,
attention_mask: Optional[torch.Tensor] = None,
decoder_input_ids: Optional[torch.LongTensor] = None,
decoder_attention_mask: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
decoder_head_mask: Optional[torch.Tensor] = None,
cross_attn_head_mask: Optional[torch.Tensor] = None,
encoder_outputs: Optional[Tuple[torch.FloatTensor]] = None,
past_key_values: Optional[Tuple[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.Tensor] = None,
decoder_inputs_embeds: Optional[torch.Tensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], Seq2SeqLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
Returns:
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if labels is not None:
use_cache = False
outputs = self.model(
input_ids,
inputs_embeds=inputs_embeds,
attention_mask=attention_mask,
decoder_input_ids=decoder_input_ids,
decoder_inputs_embeds=decoder_inputs_embeds,
encoder_outputs=encoder_outputs,
decoder_attention_mask=decoder_attention_mask,
head_mask=head_mask,
decoder_head_mask=decoder_head_mask,
cross_attn_head_mask=cross_attn_head_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
lm_logits = outputs[0]
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
# TODO(SS): do we need to ignore pad tokens in labels?
masked_lm_loss = loss_fct(lm_logits.view(-1, self.config.tgt_vocab_size), labels.view(-1))
if not return_dict:
output = (lm_logits,) + outputs[1:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return Seq2SeqLMOutput(
loss=masked_lm_loss,
logits=lm_logits,
past_key_values=outputs.past_key_values,
decoder_hidden_states=outputs.decoder_hidden_states,
decoder_attentions=outputs.decoder_attentions,
cross_attentions=outputs.cross_attentions,
encoder_last_hidden_state=outputs.encoder_last_hidden_state,
encoder_hidden_states=outputs.encoder_hidden_states,
encoder_attentions=outputs.encoder_attentions,
)
def prepare_inputs_for_generation(
self,
decoder_input_ids,
past_key_values=None,
attention_mask=None,
head_mask=None,
decoder_head_mask=None,
cross_attn_head_mask=None,
use_cache=None,
encoder_outputs=None,
**kwargs,
):
return {
"input_ids": None, # encoder_outputs is defined. input_ids not needed
"encoder_outputs": encoder_outputs,
"past_key_values": past_key_values,
"decoder_input_ids": decoder_input_ids,
"attention_mask": attention_mask,
"head_mask": head_mask,
"decoder_head_mask": decoder_head_mask,
"cross_attn_head_mask": cross_attn_head_mask,
"use_cache": use_cache, # change this to avoid caching (presumably for debugging)
}
def prepare_decoder_input_ids_from_labels(self, labels: torch.Tensor):
return shift_tokens_right(labels, self.config.pad_token_id)
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = []
for layer_past in past_key_values:
# get the correct batch idx from decoder layer's batch dim for cross and self-attn
layer_past_new = {
attn_key: _reorder_buffer(attn_cache, beam_idx) for attn_key, attn_cache in layer_past.items()
}
reordered_past.append(layer_past_new)
return reordered_past
def get_encoder(self):
return self.model.encoder
def get_decoder(self):
return self.model.decoder
def get_output_embeddings(self):
return self.model.decoder.embed_tokens
def set_output_embeddings(self, value):
self.model.decoder.embed_tokens = value
class SinusoidalPositionalEmbedding(nn.Embedding):
"""
This module produces sinusoidal positional embeddings of any length.
We don't want to save the weight of this embedding since it's not trained (deterministic) and it can be huge.
Padding symbols are ignored.
These embeddings get automatically extended in forward if more positions is needed.
"""
def __init__(self, num_positions, embedding_dim, padding_idx):
self.make_weight(num_positions, embedding_dim, padding_idx)
def make_weight(self, num_positions, embedding_dim, padding_idx):
weight = self.get_embedding(num_positions, embedding_dim, padding_idx)
if not hasattr(self, "weight"):
# in ___init__
super().__init__(num_positions, embedding_dim, padding_idx, _weight=weight)
else:
# in forward put the weights on the correct dtype and device of the param
weight = weight.to(dtype=self.weight.dtype, device=self.weight.device)
self.weight = nn.Parameter(weight)
self.weight.detach_()
self.weight.requires_grad = False
@staticmethod
def get_embedding(num_embeddings, embedding_dim, padding_idx):
"""
Build sinusoidal embeddings.
This matches the implementation in tensor2tensor, but differs slightly from the description in Section 3.5 of
"Attention Is All You Need".
"""
half_dim = embedding_dim // 2
emb = math.log(10000) / (half_dim - 1)
emb = torch.exp(torch.arange(half_dim, dtype=torch.float) * -emb)
emb = torch.arange(num_embeddings, dtype=torch.float).unsqueeze(1) * emb.unsqueeze(0)
emb = torch.cat([torch.sin(emb), torch.cos(emb)], dim=1).view(num_embeddings, -1)
if embedding_dim % 2 == 1:
# zero pad
emb = torch.cat([emb, torch.zeros(num_embeddings, 1)], dim=1)
if padding_idx is not None:
emb[padding_idx, :] = 0
return emb
@staticmethod
def make_positions(tensor, padding_idx: int):
"""
Replace non-padding symbols with their position numbers.
Position numbers begin at padding_idx+1. Padding symbols are ignored.
"""
# The series of casts and type-conversions here are carefully
# balanced to both work with ONNX export and XLA. In particular XLA
# prefers ints, cumsum defaults to output longs, and ONNX doesn't know
# how to handle the dtype kwarg in cumsum.
mask = tensor.ne(padding_idx).int()
return (torch.cumsum(mask, dim=1).type_as(mask) * mask).long() + padding_idx
def forward(
self,
input,
incremental_state: Optional[Any] = None,
timestep: Optional[Tensor] = None,
):
"""Input is expected to be of size [bsz x seqlen]."""
bsz, seq_len = input.shape[:2]
max_pos = self.padding_idx + 1 + seq_len
if max_pos > self.weight.size(0):
# expand embeddings if needed
self.make_weight(max_pos, self.embedding_dim, self.padding_idx)
positions = self.make_positions(input, self.padding_idx)
return super().forward(positions)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 1,675 | src/transformers/models/fsmt/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_torch_available
_import_structure = {
"configuration_fsmt": ["FSMT_PRETRAINED_CONFIG_ARCHIVE_MAP", "FSMTConfig"],
"tokenization_fsmt": ["FSMTTokenizer"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_fsmt"] = ["FSMTForConditionalGeneration", "FSMTModel", "PretrainedFSMTModel"]
if TYPE_CHECKING:
from .configuration_fsmt import FSMT_PRETRAINED_CONFIG_ARCHIVE_MAP, FSMTConfig
from .tokenization_fsmt import FSMTTokenizer
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_fsmt import FSMTForConditionalGeneration, FSMTModel, PretrainedFSMTModel
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 20,055 | src/transformers/models/fsmt/tokenization_fsmt.py | # coding=utf-8
# Copyright 2019 The Open AI Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for FSMT."""
import json
import os
import re
import unicodedata
from typing import Dict, List, Optional, Tuple
from ...tokenization_utils import PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {
"src_vocab_file": "vocab-src.json",
"tgt_vocab_file": "vocab-tgt.json",
"merges_file": "merges.txt",
}
PRETRAINED_VOCAB_FILES_MAP = {
"src_vocab_file": {
"stas/tiny-wmt19-en-de": "https://huggingface.co/stas/tiny-wmt19-en-de/resolve/main/vocab-src.json"
},
"tgt_vocab_file": {
"stas/tiny-wmt19-en-de": "https://huggingface.co/stas/tiny-wmt19-en-de/resolve/main/vocab-tgt.json"
},
"merges_file": {"stas/tiny-wmt19-en-de": "https://huggingface.co/stas/tiny-wmt19-en-de/resolve/main/merges.txt"},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {"stas/tiny-wmt19-en-de": 1024}
PRETRAINED_INIT_CONFIGURATION = {
"stas/tiny-wmt19-en-de": {
"langs": ["en", "de"],
"model_max_length": 1024,
"special_tokens_map_file": None,
"full_tokenizer_file": None,
}
}
def get_pairs(word):
"""
Return set of symbol pairs in a word. word is represented as tuple of symbols (symbols being variable-length
strings)
"""
pairs = set()
prev_char = word[0]
for char in word[1:]:
pairs.add((prev_char, char))
prev_char = char
return pairs
def replace_unicode_punct(text):
"""
Port of https://github.com/moses-smt/mosesdecoder/blob/master/scripts/tokenizer/replace-unicode-punctuation.perl
"""
text = text.replace("，", ",")
text = re.sub(r"。\s*", ". ", text)
text = text.replace("、", ",")
text = text.replace("”", '"')
text = text.replace("“", '"')
text = text.replace("∶", ":")
text = text.replace("：", ":")
text = text.replace("？", "?")
text = text.replace("《", '"')
text = text.replace("》", '"')
text = text.replace("）", ")")
text = text.replace("！", "!")
text = text.replace("（", "(")
text = text.replace("；", ";")
text = text.replace("１", "1")
text = text.replace("」", '"')
text = text.replace("「", '"')
text = text.replace("０", "0")
text = text.replace("３", "3")
text = text.replace("２", "2")
text = text.replace("５", "5")
text = text.replace("６", "6")
text = text.replace("９", "9")
text = text.replace("７", "7")
text = text.replace("８", "8")
text = text.replace("４", "4")
text = re.sub(r"．\s*", ". ", text)
text = text.replace("～", "~")
text = text.replace("’", "'")
text = text.replace("…", "...")
text = text.replace("━", "-")
text = text.replace("〈", "<")
text = text.replace("〉", ">")
text = text.replace("【", "[")
text = text.replace("】", "]")
text = text.replace("％", "%")
return text
def remove_non_printing_char(text):
"""
Port of https://github.com/moses-smt/mosesdecoder/blob/master/scripts/tokenizer/remove-non-printing-char.perl
"""
output = []
for char in text:
cat = unicodedata.category(char)
if cat.startswith("C"):
continue
output.append(char)
return "".join(output)
# Porting notes:
# this one is modeled after XLMTokenizer
#
# added:
# - src_vocab_file,
# - tgt_vocab_file,
# - langs,
class FSMTTokenizer(PreTrainedTokenizer):
"""
Construct an FAIRSEQ Transformer tokenizer. Based on Byte-Pair Encoding. The tokenization process is the following:
- Moses preprocessing and tokenization.
- Normalizing all inputs text.
- The arguments `special_tokens` and the function `set_special_tokens`, can be used to add additional symbols (like
"__classify__") to a vocabulary.
- The argument `langs` defines a pair of languages.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
langs (`List[str]`):
A list of two languages to translate from and to, for instance `["en", "ru"]`.
src_vocab_file (`str`):
File containing the vocabulary for the source language.
tgt_vocab_file (`st`):
File containing the vocabulary for the target language.
merges_file (`str`):
File containing the merges.
do_lower_case (`bool`, *optional*, defaults to `False`):
Whether or not to lowercase the input when tokenizing.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
sep_token (`str`, *optional*, defaults to `"</s>"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
pretrained_init_configuration = PRETRAINED_INIT_CONFIGURATION
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
def __init__(
self,
langs=None,
src_vocab_file=None,
tgt_vocab_file=None,
merges_file=None,
do_lower_case=False,
unk_token="<unk>",
bos_token="<s>",
sep_token="</s>",
pad_token="<pad>",
**kwargs,
):
super().__init__(
langs=langs,
src_vocab_file=src_vocab_file,
tgt_vocab_file=tgt_vocab_file,
merges_file=merges_file,
do_lower_case=do_lower_case,
unk_token=unk_token,
bos_token=bos_token,
sep_token=sep_token,
pad_token=pad_token,
**kwargs,
)
try:
import sacremoses
except ImportError:
raise ImportError(
"You need to install sacremoses to use XLMTokenizer. "
"See https://pypi.org/project/sacremoses/ for installation."
)
self.sm = sacremoses
self.src_vocab_file = src_vocab_file
self.tgt_vocab_file = tgt_vocab_file
self.merges_file = merges_file
self.do_lower_case = do_lower_case
# cache of sm.MosesPunctNormalizer instance
self.cache_moses_punct_normalizer = {}
# cache of sm.MosesTokenizer instance
self.cache_moses_tokenizer = {}
self.cache_moses_detokenizer = {}
if langs and len(langs) == 2:
self.src_lang, self.tgt_lang = langs
else:
raise ValueError(
f"arg `langs` needs to be a list of 2 langs, e.g. ['en', 'ru'], but got {langs}. "
"Usually that means that tokenizer can't find a mapping for the given model path "
"in PRETRAINED_VOCAB_FILES_MAP, and other maps of this tokenizer."
)
with open(src_vocab_file, encoding="utf-8") as src_vocab_handle:
self.encoder = json.load(src_vocab_handle)
with open(tgt_vocab_file, encoding="utf-8") as tgt_vocab_handle:
tgt_vocab = json.load(tgt_vocab_handle)
self.decoder = {v: k for k, v in tgt_vocab.items()}
with open(merges_file, encoding="utf-8") as merges_handle:
merges = merges_handle.read().split("\n")[:-1]
merges = [tuple(merge.split()[:2]) for merge in merges]
self.bpe_ranks = dict(zip(merges, range(len(merges))))
self.cache = {}
# hack override
def get_vocab(self) -> Dict[str, int]:
return self.get_src_vocab()
# hack override
@property
def vocab_size(self) -> int:
return self.src_vocab_size
def moses_punct_norm(self, text, lang):
if lang not in self.cache_moses_punct_normalizer:
punct_normalizer = self.sm.MosesPunctNormalizer(lang=lang)
self.cache_moses_punct_normalizer[lang] = punct_normalizer
return self.cache_moses_punct_normalizer[lang].normalize(text)
def moses_tokenize(self, text, lang):
if lang not in self.cache_moses_tokenizer:
moses_tokenizer = self.sm.MosesTokenizer(lang=lang)
self.cache_moses_tokenizer[lang] = moses_tokenizer
return self.cache_moses_tokenizer[lang].tokenize(
text, aggressive_dash_splits=True, return_str=False, escape=True
)
def moses_detokenize(self, tokens, lang):
if lang not in self.cache_moses_detokenizer:
moses_detokenizer = self.sm.MosesDetokenizer(lang=lang)
self.cache_moses_detokenizer[lang] = moses_detokenizer
return self.cache_moses_detokenizer[lang].detokenize(tokens)
def moses_pipeline(self, text, lang):
text = replace_unicode_punct(text)
text = self.moses_punct_norm(text, lang)
text = remove_non_printing_char(text)
return text
@property
def src_vocab_size(self):
return len(self.encoder)
@property
def tgt_vocab_size(self):
return len(self.decoder)
def get_src_vocab(self):
return dict(self.encoder, **self.added_tokens_encoder)
def get_tgt_vocab(self):
return dict(self.decoder, **self.added_tokens_decoder)
def bpe(self, token):
word = tuple(token[:-1]) + (token[-1] + "</w>",)
if token in self.cache:
return self.cache[token]
pairs = get_pairs(word)
if not pairs:
return token + "</w>"
while True:
bigram = min(pairs, key=lambda pair: self.bpe_ranks.get(pair, float("inf")))
if bigram not in self.bpe_ranks:
break
first, second = bigram
new_word = []
i = 0
while i < len(word):
try:
j = word.index(first, i)
except ValueError:
new_word.extend(word[i:])
break
else:
new_word.extend(word[i:j])
i = j
if word[i] == first and i < len(word) - 1 and word[i + 1] == second:
new_word.append(first + second)
i += 2
else:
new_word.append(word[i])
i += 1
new_word = tuple(new_word)
word = new_word
if len(word) == 1:
break
else:
pairs = get_pairs(word)
word = " ".join(word)
if word == "\n </w>":
word = "\n</w>"
self.cache[token] = word
return word
def _tokenize(self, text, lang="en", bypass_tokenizer=False):
"""
Tokenize a string given language code using Moses.
Details of tokenization:
- [sacremoses](https://github.com/alvations/sacremoses): port of Moses
- Install with `pip install sacremoses`
Args:
- lang: ISO language code (default = 'en') (string). Languages should belong of the model supported
languages. However, we don't enforce it.
- bypass_tokenizer: Allow users to preprocess and tokenize the sentences externally (default = False)
(bool). If True, we only apply BPE.
Returns:
List of tokens.
"""
# ignore `lang` which is currently isn't explicitly passed in tokenization_utils.py and always results in lang=en
# if lang != self.src_lang:
# raise ValueError(f"Expected lang={self.src_lang}, but got {lang}")
lang = self.src_lang
if self.do_lower_case:
text = text.lower()
if bypass_tokenizer:
text = text.split()
else:
text = self.moses_pipeline(text, lang=lang)
text = self.moses_tokenize(text, lang=lang)
split_tokens = []
for token in text:
if token:
split_tokens.extend(list(self.bpe(token).split(" ")))
return split_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.encoder.get(token, self.encoder.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.decoder.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
# remove BPE
tokens = [t.replace(" ", "").replace("</w>", " ") for t in tokens]
tokens = "".join(tokens).split()
# detokenize
text = self.moses_detokenize(tokens, self.tgt_lang)
return text
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A FAIRSEQ Transformer sequence has the following format:
- single sequence: `<s> X </s>`
- pair of sequences: `<s> A </s> B </s>`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
sep = [self.sep_token_id]
# no bos used in fairseq
if token_ids_1 is None:
return token_ids_0 + sep
return token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
# no bos used in fairseq
if token_ids_1 is not None:
return ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
return ([0] * len(token_ids_0)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A FAIRSEQ
Transformer sequence pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
Creates a mask from the two sequences passed to be used in a sequence-pair classification task. An
FAIRSEQ_TRANSFORMER sequence pair mask has the following format:
"""
sep = [self.sep_token_id]
# no bos used in fairseq
if token_ids_1 is None:
return len(token_ids_0 + sep) * [0]
return len(token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
src_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["src_vocab_file"]
)
tgt_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["tgt_vocab_file"]
)
merges_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["merges_file"]
)
with open(src_vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(self.encoder, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
with open(tgt_vocab_file, "w", encoding="utf-8") as f:
tgt_vocab = {v: k for k, v in self.decoder.items()}
f.write(json.dumps(tgt_vocab, indent=2, sort_keys=True, ensure_ascii=False) + "\n")
index = 0
with open(merges_file, "w", encoding="utf-8") as writer:
for bpe_tokens, token_index in sorted(self.bpe_ranks.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {merges_file}: BPE merge indices are not consecutive."
" Please check that the tokenizer is not corrupted!"
)
index = token_index
writer.write(" ".join(bpe_tokens) + "\n")
index += 1
return src_vocab_file, tgt_vocab_file, merges_file
def __getstate__(self):
state = self.__dict__.copy()
state["sm"] = None
return state
def __setstate__(self, d):
self.__dict__ = d
try:
import sacremoses
except ImportError:
raise ImportError(
"You need to install sacremoses to use XLMTokenizer. "
"See https://pypi.org/project/sacremoses/ for installation."
)
self.sm = sacremoses
|
27182812/ChatGLM-LLaMA-chinese-insturct | 10,579 | src/transformers/models/fsmt/configuration_fsmt.py | # coding=utf-8
# Copyright 2019-present, Facebook, Inc and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" FSMT configuration"""
import copy
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
FSMT_PRETRAINED_CONFIG_ARCHIVE_MAP = {}
class DecoderConfig(PretrainedConfig):
r"""
Configuration class for FSMT's decoder specific things. note: this is a private helper class
"""
model_type = "fsmt_decoder"
def __init__(self, vocab_size=0, bos_token_id=0):
super().__init__()
self.vocab_size = vocab_size
self.bos_token_id = bos_token_id
class FSMTConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`FSMTModel`]. It is used to instantiate a FSMT
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the FSMT
[facebook/wmt19-en-ru](https://huggingface.co/facebook/wmt19-en-ru) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
langs (`List[str]`):
A list with source language and target_language (e.g., ['en', 'ru']).
src_vocab_size (`int`):
Vocabulary size of the encoder. Defines the number of different tokens that can be represented by the
`inputs_ids` passed to the forward method in the encoder.
tgt_vocab_size (`int`):
Vocabulary size of the decoder. Defines the number of different tokens that can be represented by the
`inputs_ids` passed to the forward method in the decoder.
d_model (`int`, *optional*, defaults to 1024):
Dimensionality of the layers and the pooler layer.
encoder_layers (`int`, *optional*, defaults to 12):
Number of encoder layers.
decoder_layers (`int`, *optional*, defaults to 12):
Number of decoder layers.
encoder_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer encoder.
decoder_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer decoder.
decoder_ffn_dim (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often named feed-forward) layer in decoder.
encoder_ffn_dim (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often named feed-forward) layer in decoder.
activation_function (`str` or `Callable`, *optional*, defaults to `"relu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
activation_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for activations inside the fully connected layer.
max_position_embeddings (`int`, *optional*, defaults to 1024):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
init_std (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
scale_embedding (`bool`, *optional*, defaults to `True`):
Scale embeddings by diving by sqrt(d_model).
bos_token_id (`int`, *optional*, defaults to 0)
Beginning of stream token id.
pad_token_id (`int`, *optional*, defaults to 1)
Padding token id.
eos_token_id (`int`, *optional*, defaults to 2)
End of stream token id.
decoder_start_token_id (`int`, *optional*):
This model starts decoding with `eos_token_id`
encoder_layerdrop (`float`, *optional*, defaults to 0.0):
Google "layerdrop arxiv", as its not explainable in one line.
decoder_layerdrop (`float`, *optional*, defaults to 0.0):
Google "layerdrop arxiv", as its not explainable in one line.
is_encoder_decoder (`bool`, *optional*, defaults to `True`):
Whether this is an encoder/decoder model.
tie_word_embeddings (`bool`, *optional*, defaults to `False`):
Whether to tie input and output embeddings.
num_beams (`int`, *optional*, defaults to 5)
Number of beams for beam search that will be used by default in the `generate` method of the model. 1 means
no beam search.
length_penalty (`float`, *optional*, defaults to 1)
Exponential penalty to the length that is used with beam-based generation. It is applied as an exponent to
the sequence length, which in turn is used to divide the score of the sequence. Since the score is the log
likelihood of the sequence (i.e. negative), `length_penalty` > 0.0 promotes longer sequences, while
`length_penalty` < 0.0 encourages shorter sequences.
early_stopping (`bool`, *optional*, defaults to `False`)
Flag that will be used by default in the `generate` method of the model. Whether to stop the beam search
when at least `num_beams` sentences are finished per batch or not.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
forced_eos_token_id (`int`, *optional*, defaults to 2):
The id of the token to force as the last generated token when `max_length` is reached. Usually set to
`eos_token_id`.
Examples:
```python
>>> from transformers import FSMTConfig, FSMTModel
>>> # Initializing a FSMT facebook/wmt19-en-ru style configuration
>>> config = FSMTConfig()
>>> # Initializing a model (with random weights) from the configuration
>>> model = FSMTModel(config)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "fsmt"
attribute_map = {"num_attention_heads": "encoder_attention_heads", "hidden_size": "d_model"}
# update the defaults from config file
def __init__(
self,
langs=["en", "de"],
src_vocab_size=42024,
tgt_vocab_size=42024,
activation_function="relu",
d_model=1024,
max_length=200,
max_position_embeddings=1024,
encoder_ffn_dim=4096,
encoder_layers=12,
encoder_attention_heads=16,
encoder_layerdrop=0.0,
decoder_ffn_dim=4096,
decoder_layers=12,
decoder_attention_heads=16,
decoder_layerdrop=0.0,
attention_dropout=0.0,
dropout=0.1,
activation_dropout=0.0,
init_std=0.02,
decoder_start_token_id=2,
is_encoder_decoder=True,
scale_embedding=True,
tie_word_embeddings=False,
num_beams=5,
length_penalty=1.0,
early_stopping=False,
use_cache=True,
pad_token_id=1,
bos_token_id=0,
eos_token_id=2,
forced_eos_token_id=2,
**common_kwargs,
):
self.langs = langs
self.src_vocab_size = src_vocab_size
self.tgt_vocab_size = tgt_vocab_size
self.d_model = d_model # encoder_embed_dim and decoder_embed_dim
self.encoder_ffn_dim = encoder_ffn_dim
self.encoder_layers = self.num_hidden_layers = encoder_layers
self.encoder_attention_heads = encoder_attention_heads
self.encoder_layerdrop = encoder_layerdrop
self.decoder_layerdrop = decoder_layerdrop
self.decoder_ffn_dim = decoder_ffn_dim
self.decoder_layers = decoder_layers
self.decoder_attention_heads = decoder_attention_heads
self.max_position_embeddings = max_position_embeddings
self.init_std = init_std # Normal(0, this parameter)
self.activation_function = activation_function
self.decoder = DecoderConfig(vocab_size=tgt_vocab_size, bos_token_id=eos_token_id)
if "decoder" in common_kwargs:
del common_kwargs["decoder"]
self.scale_embedding = scale_embedding # scale factor will be sqrt(d_model) if True
# 3 Types of Dropout
self.attention_dropout = attention_dropout
self.activation_dropout = activation_dropout
self.dropout = dropout
self.use_cache = use_cache
super().__init__(
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
decoder_start_token_id=decoder_start_token_id,
is_encoder_decoder=is_encoder_decoder,
tie_word_embeddings=tie_word_embeddings,
forced_eos_token_id=forced_eos_token_id,
max_length=max_length,
num_beams=num_beams,
length_penalty=length_penalty,
early_stopping=early_stopping,
**common_kwargs,
)
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default *to_dict()* from *PretrainedConfig*.
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = copy.deepcopy(self.__dict__)
output["decoder"] = self.decoder.to_dict()
output["model_type"] = self.__class__.model_type
return output
|
27182812/ChatGLM-LLaMA-chinese-insturct | 11,264 | src/transformers/models/fsmt/convert_fsmt_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2018 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# Note: if you intend to run this script make sure you look under scripts/fsmt/
# to locate the appropriate script to do the work correctly. There is a set of scripts to:
# - download and prepare data and run the conversion script
# - perform eval to get the best hparam into the config
# - generate model_cards - useful if you have multiple models from the same paper
import argparse
import json
import os
import re
from collections import OrderedDict
from os.path import basename, dirname
import fairseq
import torch
from fairseq import hub_utils
from fairseq.data.dictionary import Dictionary
from transformers import FSMTConfig, FSMTForConditionalGeneration
from transformers.models.fsmt.tokenization_fsmt import VOCAB_FILES_NAMES
from transformers.tokenization_utils_base import TOKENIZER_CONFIG_FILE
from transformers.utils import WEIGHTS_NAME, logging
logging.set_verbosity_warning()
json_indent = 2
# based on the results of a search on a range of `num_beams`, `length_penalty` and `early_stopping`
# values against wmt19 test data to obtain the best BLEU scores, we will use the following defaults:
#
# * `num_beams`: 5 (higher scores better, but requires more memory/is slower, can be adjusted by users)
# * `early_stopping`: `False` consistently scored better
# * `length_penalty` varied, so will assign the best one depending on the model
best_score_hparams = {
# fairseq:
"wmt19-ru-en": {"length_penalty": 1.1},
"wmt19-en-ru": {"length_penalty": 1.15},
"wmt19-en-de": {"length_penalty": 1.0},
"wmt19-de-en": {"length_penalty": 1.1},
# allenai:
"wmt16-en-de-dist-12-1": {"length_penalty": 0.6},
"wmt16-en-de-dist-6-1": {"length_penalty": 0.6},
"wmt16-en-de-12-1": {"length_penalty": 0.8},
"wmt19-de-en-6-6-base": {"length_penalty": 0.6},
"wmt19-de-en-6-6-big": {"length_penalty": 0.6},
}
# this remaps the different models to their organization names
org_names = {}
for m in ["wmt19-ru-en", "wmt19-en-ru", "wmt19-en-de", "wmt19-de-en"]:
org_names[m] = "facebook"
for m in [
"wmt16-en-de-dist-12-1",
"wmt16-en-de-dist-6-1",
"wmt16-en-de-12-1",
"wmt19-de-en-6-6-base",
"wmt19-de-en-6-6-big",
]:
org_names[m] = "allenai"
def rewrite_dict_keys(d):
# (1) remove word breaking symbol, (2) add word ending symbol where the word is not broken up,
# e.g.: d = {'le@@': 5, 'tt@@': 6, 'er': 7} => {'le': 5, 'tt': 6, 'er</w>': 7}
d2 = dict((re.sub(r"@@$", "", k), v) if k.endswith("@@") else (re.sub(r"$", "</w>", k), v) for k, v in d.items())
keep_keys = "<s> <pad> </s> <unk>".split()
# restore the special tokens
for k in keep_keys:
del d2[f"{k}</w>"]
d2[k] = d[k] # restore
return d2
def convert_fsmt_checkpoint_to_pytorch(fsmt_checkpoint_path, pytorch_dump_folder_path):
# prep
assert os.path.exists(fsmt_checkpoint_path)
os.makedirs(pytorch_dump_folder_path, exist_ok=True)
print(f"Writing results to {pytorch_dump_folder_path}")
# handle various types of models
checkpoint_file = basename(fsmt_checkpoint_path)
fsmt_folder_path = dirname(fsmt_checkpoint_path)
cls = fairseq.model_parallel.models.transformer.ModelParallelTransformerModel
models = cls.hub_models()
kwargs = {"bpe": "fastbpe", "tokenizer": "moses"}
data_name_or_path = "."
# note: since the model dump is old, fairseq has upgraded its model some
# time later, and it does a whole lot of rewrites and splits on the saved
# weights, therefore we can't use torch.load() directly on the model file.
# see: upgrade_state_dict(state_dict) in fairseq_model.py
print(f"using checkpoint {checkpoint_file}")
chkpt = hub_utils.from_pretrained(
fsmt_folder_path, checkpoint_file, data_name_or_path, archive_map=models, **kwargs
)
args = vars(chkpt["args"]["model"])
src_lang = args["source_lang"]
tgt_lang = args["target_lang"]
data_root = dirname(pytorch_dump_folder_path)
model_dir = basename(pytorch_dump_folder_path)
# dicts
src_dict_file = os.path.join(fsmt_folder_path, f"dict.{src_lang}.txt")
tgt_dict_file = os.path.join(fsmt_folder_path, f"dict.{tgt_lang}.txt")
src_dict = Dictionary.load(src_dict_file)
src_vocab = rewrite_dict_keys(src_dict.indices)
src_vocab_size = len(src_vocab)
src_vocab_file = os.path.join(pytorch_dump_folder_path, "vocab-src.json")
print(f"Generating {src_vocab_file} of {src_vocab_size} of {src_lang} records")
with open(src_vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(src_vocab, ensure_ascii=False, indent=json_indent))
# detect whether this is a do_lower_case situation, which can be derived by checking whether we
# have at least one uppercase letter in the source vocab
do_lower_case = True
for k in src_vocab.keys():
if not k.islower():
do_lower_case = False
break
tgt_dict = Dictionary.load(tgt_dict_file)
tgt_vocab = rewrite_dict_keys(tgt_dict.indices)
tgt_vocab_size = len(tgt_vocab)
tgt_vocab_file = os.path.join(pytorch_dump_folder_path, "vocab-tgt.json")
print(f"Generating {tgt_vocab_file} of {tgt_vocab_size} of {tgt_lang} records")
with open(tgt_vocab_file, "w", encoding="utf-8") as f:
f.write(json.dumps(tgt_vocab, ensure_ascii=False, indent=json_indent))
# merges_file (bpecodes)
merges_file = os.path.join(pytorch_dump_folder_path, VOCAB_FILES_NAMES["merges_file"])
for fn in ["bpecodes", "code"]: # older fairseq called the merges file "code"
fsmt_merges_file = os.path.join(fsmt_folder_path, fn)
if os.path.exists(fsmt_merges_file):
break
with open(fsmt_merges_file, encoding="utf-8") as fin:
merges = fin.read()
merges = re.sub(r" \d+$", "", merges, 0, re.M) # remove frequency number
print(f"Generating {merges_file}")
with open(merges_file, "w", encoding="utf-8") as fout:
fout.write(merges)
# model config
fsmt_model_config_file = os.path.join(pytorch_dump_folder_path, "config.json")
# validate bpe/tokenizer config, as currently it's hardcoded to moses+fastbpe -
# may have to modify the tokenizer if a different type is used by a future model
assert args["bpe"] == "fastbpe", f"need to extend tokenizer to support bpe={args['bpe']}"
assert args["tokenizer"] == "moses", f"need to extend tokenizer to support bpe={args['tokenizer']}"
model_conf = {
"architectures": ["FSMTForConditionalGeneration"],
"model_type": "fsmt",
"activation_dropout": args["activation_dropout"],
"activation_function": "relu",
"attention_dropout": args["attention_dropout"],
"d_model": args["decoder_embed_dim"],
"dropout": args["dropout"],
"init_std": 0.02,
"max_position_embeddings": args["max_source_positions"],
"num_hidden_layers": args["encoder_layers"],
"src_vocab_size": src_vocab_size,
"tgt_vocab_size": tgt_vocab_size,
"langs": [src_lang, tgt_lang],
"encoder_attention_heads": args["encoder_attention_heads"],
"encoder_ffn_dim": args["encoder_ffn_embed_dim"],
"encoder_layerdrop": args["encoder_layerdrop"],
"encoder_layers": args["encoder_layers"],
"decoder_attention_heads": args["decoder_attention_heads"],
"decoder_ffn_dim": args["decoder_ffn_embed_dim"],
"decoder_layerdrop": args["decoder_layerdrop"],
"decoder_layers": args["decoder_layers"],
"bos_token_id": 0,
"pad_token_id": 1,
"eos_token_id": 2,
"is_encoder_decoder": True,
"scale_embedding": not args["no_scale_embedding"],
"tie_word_embeddings": args["share_all_embeddings"],
}
# good hparam defaults to start with
model_conf["num_beams"] = 5
model_conf["early_stopping"] = False
if model_dir in best_score_hparams and "length_penalty" in best_score_hparams[model_dir]:
model_conf["length_penalty"] = best_score_hparams[model_dir]["length_penalty"]
else:
model_conf["length_penalty"] = 1.0
print(f"Generating {fsmt_model_config_file}")
with open(fsmt_model_config_file, "w", encoding="utf-8") as f:
f.write(json.dumps(model_conf, ensure_ascii=False, indent=json_indent))
# tokenizer config
fsmt_tokenizer_config_file = os.path.join(pytorch_dump_folder_path, TOKENIZER_CONFIG_FILE)
tokenizer_conf = {
"langs": [src_lang, tgt_lang],
"model_max_length": 1024,
"do_lower_case": do_lower_case,
}
print(f"Generating {fsmt_tokenizer_config_file}")
with open(fsmt_tokenizer_config_file, "w", encoding="utf-8") as f:
f.write(json.dumps(tokenizer_conf, ensure_ascii=False, indent=json_indent))
# model
model = chkpt["models"][0]
model_state_dict = model.state_dict()
# rename keys to start with 'model.'
model_state_dict = OrderedDict(("model." + k, v) for k, v in model_state_dict.items())
# remove unneeded keys
ignore_keys = [
"model.model",
"model.encoder.version",
"model.decoder.version",
"model.encoder_embed_tokens.weight",
"model.decoder_embed_tokens.weight",
"model.encoder.embed_positions._float_tensor",
"model.decoder.embed_positions._float_tensor",
]
for k in ignore_keys:
model_state_dict.pop(k, None)
config = FSMTConfig.from_pretrained(pytorch_dump_folder_path)
model_new = FSMTForConditionalGeneration(config)
# check that it loads ok
model_new.load_state_dict(model_state_dict, strict=False)
# save
pytorch_weights_dump_path = os.path.join(pytorch_dump_folder_path, WEIGHTS_NAME)
print(f"Generating {pytorch_weights_dump_path}")
torch.save(model_state_dict, pytorch_weights_dump_path)
print("Conversion is done!")
print("\nLast step is to upload the files to s3")
print(f"cd {data_root}")
print(f"transformers-cli upload {model_dir}")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--fsmt_checkpoint_path",
default=None,
type=str,
required=True,
help=(
"Path to the official PyTorch checkpoint file which is expected to reside in the dump dir with dicts,"
" bpecodes, etc."
),
)
parser.add_argument(
"--pytorch_dump_folder_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
args = parser.parse_args()
convert_fsmt_checkpoint_to_pytorch(args.fsmt_checkpoint_path, args.pytorch_dump_folder_path)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,126 | src/transformers/models/altclip/__init__.py | # Copyright 2020 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available, is_torch_available
_import_structure = {
"configuration_altclip": [
"ALTCLIP_PRETRAINED_CONFIG_ARCHIVE_MAP",
"AltCLIPConfig",
"AltCLIPTextConfig",
"AltCLIPVisionConfig",
],
"processing_altclip": ["AltCLIPProcessor"],
}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_altclip"] = [
"ALTCLIP_PRETRAINED_MODEL_ARCHIVE_LIST",
"AltCLIPPreTrainedModel",
"AltCLIPModel",
"AltCLIPTextModel",
"AltCLIPVisionModel",
]
if TYPE_CHECKING:
from .configuration_altclip import (
ALTCLIP_PRETRAINED_CONFIG_ARCHIVE_MAP,
AltCLIPConfig,
AltCLIPTextConfig,
AltCLIPVisionConfig,
)
from .processing_altclip import AltCLIPProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_altclip import (
ALTCLIP_PRETRAINED_MODEL_ARCHIVE_LIST,
AltCLIPModel,
AltCLIPPreTrainedModel,
AltCLIPTextModel,
AltCLIPVisionModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 6,444 | src/transformers/models/altclip/processing_altclip.py | # coding=utf-8
# Copyright 2022 WenXiang ZhongzhiCheng LedellWu LiuGuang BoWenZhang The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Image/Text processor class for AltCLIP
"""
import warnings
from ...processing_utils import ProcessorMixin
from ...tokenization_utils_base import BatchEncoding
class AltCLIPProcessor(ProcessorMixin):
r"""
Constructs a AltCLIP processor which wraps a CLIP image processor and a XLM-Roberta tokenizer into a single
processor.
[`AltCLIPProcessor`] offers all the functionalities of [`CLIPImageProcessor`] and [`XLMRobertaTokenizerFast`]. See
the [`~AltCLIPProcessor.__call__`] and [`~AltCLIPProcessor.decode`] for more information.
Args:
image_processor ([`CLIPImageProcessor`]):
The image processor is a required input.
tokenizer ([`XLMRobertaTokenizerFast`]):
The tokenizer is a required input.
"""
attributes = ["image_processor", "tokenizer"]
image_processor_class = "CLIPImageProcessor"
tokenizer_class = ("XLMRobertaTokenizer", "XLMRobertaTokenizerFast")
def __init__(self, image_processor=None, tokenizer=None, **kwargs):
if "feature_extractor" in kwargs:
warnings.warn(
"The `feature_extractor` argument is deprecated and will be removed in v5, use `image_processor`"
" instead.",
FutureWarning,
)
feature_extractor = kwargs.pop("feature_extractor")
image_processor = image_processor if image_processor is not None else feature_extractor
if image_processor is None:
raise ValueError("You need to specify an `image_processor`.")
if tokenizer is None:
raise ValueError("You need to specify a `tokenizer`.")
super().__init__(image_processor, tokenizer)
def __call__(self, text=None, images=None, return_tensors=None, **kwargs):
"""
Main method to prepare for the model one or several sequences(s) and image(s). This method forwards the `text`
and `kwargs` arguments to XLMRobertaTokenizerFast's [`~XLMRobertaTokenizerFast.__call__`] if `text` is not
`None` to encode the text. To prepare the image(s), this method forwards the `images` and `kwrags` arguments to
CLIPImageProcessor's [`~CLIPImageProcessor.__call__`] if `images` is not `None`. Please refer to the doctsring
of the above two methods for more information.
Args:
text (`str`, `List[str]`, `List[List[str]]`):
The sequence or batch of sequences to be encoded. Each sequence can be a string or a list of strings
(pretokenized string). If the sequences are provided as list of strings (pretokenized), you must set
`is_split_into_words=True` (to lift the ambiguity with a batch of sequences).
images (`PIL.Image.Image`, `np.ndarray`, `torch.Tensor`, `List[PIL.Image.Image]`, `List[np.ndarray]`, `List[torch.Tensor]`):
The image or batch of images to be prepared. Each image can be a PIL image, NumPy array or PyTorch
tensor. In case of a NumPy array/PyTorch tensor, each image should be of shape (C, H, W), where C is a
number of channels, H and W are image height and width.
return_tensors (`str` or [`~utils.TensorType`], *optional*):
If set, will return tensors of a particular framework. Acceptable values are:
- `'tf'`: Return TensorFlow `tf.constant` objects.
- `'pt'`: Return PyTorch `torch.Tensor` objects.
- `'np'`: Return NumPy `np.ndarray` objects.
- `'jax'`: Return JAX `jnp.ndarray` objects.
Returns:
[`BatchEncoding`]: A [`BatchEncoding`] with the following fields:
- **input_ids** -- List of token ids to be fed to a model. Returned when `text` is not `None`.
- **attention_mask** -- List of indices specifying which tokens should be attended to by the model (when
`return_attention_mask=True` or if *"attention_mask"* is in `self.model_input_names` and if `text` is not
`None`).
- **pixel_values** -- Pixel values to be fed to a model. Returned when `images` is not `None`.
"""
if text is None and images is None:
raise ValueError("You have to specify either text or images. Both cannot be none.")
if text is not None:
encoding = self.tokenizer(text, return_tensors=return_tensors, **kwargs)
if images is not None:
image_features = self.image_processor(images, return_tensors=return_tensors, **kwargs)
if text is not None and images is not None:
encoding["pixel_values"] = image_features.pixel_values
return encoding
elif text is not None:
return encoding
else:
return BatchEncoding(data=dict(**image_features), tensor_type=return_tensors)
def batch_decode(self, *args, **kwargs):
"""
This method forwards all its arguments to XLMRobertaTokenizerFast's [`~PreTrainedTokenizer.batch_decode`].
Please refer to the docstring of this method for more information.
"""
return self.tokenizer.batch_decode(*args, **kwargs)
def decode(self, *args, **kwargs):
"""
This method forwards all its arguments to XLMRobertaTokenizerFast's [`~PreTrainedTokenizer.decode`]. Please
refer to the docstring of this method for more information.
"""
return self.tokenizer.decode(*args, **kwargs)
@property
def model_input_names(self):
tokenizer_input_names = self.tokenizer.model_input_names
image_processor_input_names = self.image_processor.model_input_names
return list(dict.fromkeys(tokenizer_input_names + image_processor_input_names))
|
27182812/ChatGLM-LLaMA-chinese-insturct | 78,668 | src/transformers/models/altclip/modeling_altclip.py | # coding=utf-8
# Copyright 2022 The BAAI Teams Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch AltCLIP model."""
import math
from dataclasses import dataclass
from typing import Any, List, Optional, Tuple, Union
import torch
import torch.nn as nn
import torch.utils.checkpoint
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutput,
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPooling,
BaseModelOutputWithPoolingAndCrossAttentions,
BaseModelOutputWithPoolingAndProjection,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward, find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import ModelOutput, add_start_docstrings_to_model_forward, logging, replace_return_docstrings
from .configuration_altclip import AltCLIPConfig, AltCLIPTextConfig, AltCLIPVisionConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "BAAI/AltCLIP"
_CONFIG_FOR_DOC = "AltCLIPConfig"
ALTCLIP_PRETRAINED_MODEL_ARCHIVE_LIST = [
"BAAI/AltCLIP",
# See all AltCLIP models at https://huggingface.co/models?filter=altclip
]
ALTCLIP_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`CLIPConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
ALTCLIP_TEXT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
ALTCLIP_VISION_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
ALTCLIP_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Padding will be ignored by default should you provide it. Pixel values can be obtained using
[`AutoImageProcessor`]. See [`CLIPImageProcessor.__call__`] for details.
return_loss (`bool`, *optional*):
Whether or not to return the contrastive loss.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# contrastive loss function, adapted from
# https://sachinruk.github.io/blog/pytorch/pytorch%20lightning/loss%20function/gpu/2021/03/07/CLIP.html
def contrastive_loss(logits: torch.Tensor) -> torch.Tensor:
return nn.functional.cross_entropy(logits, torch.arange(len(logits), device=logits.device))
def clip_loss(similarity: torch.Tensor) -> torch.Tensor:
caption_loss = contrastive_loss(similarity)
image_loss = contrastive_loss(similarity.t())
return (caption_loss + image_loss) / 2.0
@dataclass
# Copied from transformers.models.clip.modeling_clip.CLIPOutput with CLIP->AltCLIP
class AltCLIPOutput(ModelOutput):
"""
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `return_loss` is `True`):
Contrastive loss for image-text similarity.
logits_per_image:(`torch.FloatTensor` of shape `(image_batch_size, text_batch_size)`):
The scaled dot product scores between `image_embeds` and `text_embeds`. This represents the image-text
similarity scores.
logits_per_text:(`torch.FloatTensor` of shape `(text_batch_size, image_batch_size)`):
The scaled dot product scores between `text_embeds` and `image_embeds`. This represents the text-image
similarity scores.
text_embeds(`torch.FloatTensor` of shape `(batch_size, output_dim`):
The text embeddings obtained by applying the projection layer to the pooled output of [`AltCLIPTextModel`].
image_embeds(`torch.FloatTensor` of shape `(batch_size, output_dim`):
The image embeddings obtained by applying the projection layer to the pooled output of
[`AltCLIPVisionModel`].
text_model_output(`BaseModelOutputWithPooling`):
The output of the [`AltCLIPTextModel`].
vision_model_output(`BaseModelOutputWithPooling`):
The output of the [`AltCLIPVisionModel`].
"""
loss: Optional[torch.FloatTensor] = None
logits_per_image: torch.FloatTensor = None
logits_per_text: torch.FloatTensor = None
text_embeds: torch.FloatTensor = None
image_embeds: torch.FloatTensor = None
text_model_output: BaseModelOutputWithPooling = None
vision_model_output: BaseModelOutputWithPooling = None
def to_tuple(self) -> Tuple[Any]:
return tuple(
self[k] if k not in ["text_model_output", "vision_model_output"] else getattr(self, k).to_tuple()
for k in self.keys()
)
# Copied from transformers.models.roberta.modeling_roberta.RobertaEmbeddings with Roberta->AltRoberta
class AltRobertaEmbeddings(nn.Module):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
# Copied from transformers.models.bert.modeling_bert.BertEmbeddings.__init__
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer("position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)))
self.register_buffer(
"token_type_ids", torch.zeros(self.position_ids.size(), dtype=torch.long), persistent=False
)
# End copy
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
def forward(
self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
# Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
# when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
# issue #5664
if token_type_ids is None:
if hasattr(self, "token_type_ids"):
buffered_token_type_ids = self.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
# Copied from transformers.models.roberta.modeling_roberta.RobertaSelfAttention with Roberta->AltRoberta
class AltRobertaSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
use_cache = past_key_value is not None
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
query_length, key_length = query_layer.shape[2], key_layer.shape[2]
if use_cache:
position_ids_l = torch.tensor(key_length - 1, dtype=torch.long, device=hidden_states.device).view(
-1, 1
)
else:
position_ids_l = torch.arange(query_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(key_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in AltRobertaModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
# Copied from transformers.models.roberta.modeling_roberta.RobertaSelfOutput
class AltRobertaSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.roberta.modeling_roberta.RobertaAttention with Roberta->AltRoberta
class AltRobertaAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
self.self = AltRobertaSelfAttention(config, position_embedding_type=position_embedding_type)
self.output = AltRobertaSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.self.query = prune_linear_layer(self.self.query, index)
self.self.key = prune_linear_layer(self.self.key, index)
self.self.value = prune_linear_layer(self.self.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.roberta.modeling_roberta.RobertaIntermediate with Roberta->AltRoberta
class AltRobertaIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.roberta.modeling_roberta.RobertaOutput
class AltRobertaOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
# Copied from transformers.models.roberta.modeling_roberta.RobertaLayer with Roberta->AltRoberta
class AltRobertaLayer(nn.Module):
def __init__(self, config):
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = AltRobertaAttention(config)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = AltRobertaAttention(config, position_embedding_type="absolute")
self.intermediate = AltRobertaIntermediate(config)
self.output = AltRobertaOutput(config)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
output_attentions=output_attentions,
past_key_value=self_attn_past_key_value,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
# Copied from transformers.models.roberta.modeling_roberta.RobertaEncoder with Roberta->AltRoberta
class AltRobertaEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.layer = nn.ModuleList([AltRobertaLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = False,
output_hidden_states: Optional[bool] = False,
return_dict: Optional[bool] = True,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPastAndCrossAttentions]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_value, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.roberta.modeling_roberta.RobertaPooler
class AltRobertaPooler(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
# Copied from transformers.models.clip.modeling_clip.CLIPAttention with CLIP->AltCLIP
class AltCLIPAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(self, config):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.num_heads = config.num_attention_heads
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim} and `num_heads`:"
f" {self.num_heads})."
)
self.scale = self.head_dim**-0.5
self.dropout = config.attention_dropout
self.k_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.v_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.q_proj = nn.Linear(self.embed_dim, self.embed_dim)
self.out_proj = nn.Linear(self.embed_dim, self.embed_dim)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
bsz, tgt_len, embed_dim = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scale
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
# apply the causal_attention_mask first
if causal_attention_mask is not None:
if causal_attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {causal_attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + causal_attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if output_attentions:
# this operation is a bit akward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
attn_output = attn_output.reshape(bsz, tgt_len, embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped
# Copied from transformers.models.clip.modeling_clip.CLIPMLP with CLIP->AltCLIP
class AltCLIPMLP(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.activation_fn = ACT2FN[config.hidden_act]
self.fc1 = nn.Linear(config.hidden_size, config.intermediate_size)
self.fc2 = nn.Linear(config.intermediate_size, config.hidden_size)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
return hidden_states
# Copied from transformers.models.clip.modeling_clip.CLIPEncoderLayer with CLIP->AltCLIP
class AltCLIPEncoderLayer(nn.Module):
def __init__(self, config: AltCLIPConfig):
super().__init__()
self.embed_dim = config.hidden_size
self.self_attn = AltCLIPAttention(config)
self.layer_norm1 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
self.mlp = AltCLIPMLP(config)
self.layer_norm2 = nn.LayerNorm(self.embed_dim, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: torch.Tensor,
causal_attention_mask: torch.Tensor,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.FloatTensor]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
`(config.encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
"""
residual = hidden_states
hidden_states = self.layer_norm1(hidden_states)
hidden_states, attn_weights = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
causal_attention_mask=causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = residual + hidden_states
residual = hidden_states
hidden_states = self.layer_norm2(hidden_states)
hidden_states = self.mlp(hidden_states)
hidden_states = residual + hidden_states
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_weights,)
return outputs
# Copied from transformers.models.clip.modeling_clip.CLIPEncoder with CLIP->AltCLIP
class AltCLIPEncoder(nn.Module):
"""
Transformer encoder consisting of `config.num_hidden_layers` self attention layers. Each layer is a
[`AltCLIPEncoderLayer`].
Args:
config: AltCLIPConfig
"""
def __init__(self, config: AltCLIPConfig):
super().__init__()
self.config = config
self.layers = nn.ModuleList([AltCLIPEncoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
inputs_embeds,
attention_mask: Optional[torch.Tensor] = None,
causal_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutput]:
r"""
Args:
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
causal_attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Causal mask for the text model. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
encoder_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
hidden_states = inputs_embeds
for idx, encoder_layer in enumerate(self.layers):
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(encoder_layer),
hidden_states,
attention_mask,
causal_attention_mask,
)
else:
layer_outputs = encoder_layer(
hidden_states,
attention_mask,
causal_attention_mask,
output_attentions=output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if output_hidden_states:
encoder_states = encoder_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, encoder_states, all_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states, hidden_states=encoder_states, attentions=all_attentions
)
# Copied from transformers.models.clip.modeling_clip.CLIPVisionEmbeddings with CLIP->AltCLIP
class AltCLIPVisionEmbeddings(nn.Module):
def __init__(self, config: AltCLIPVisionConfig):
super().__init__()
self.config = config
self.embed_dim = config.hidden_size
self.image_size = config.image_size
self.patch_size = config.patch_size
self.class_embedding = nn.Parameter(torch.randn(self.embed_dim))
self.patch_embedding = nn.Conv2d(
in_channels=config.num_channels,
out_channels=self.embed_dim,
kernel_size=self.patch_size,
stride=self.patch_size,
bias=False,
)
self.num_patches = (self.image_size // self.patch_size) ** 2
self.num_positions = self.num_patches + 1
self.position_embedding = nn.Embedding(self.num_positions, self.embed_dim)
self.register_buffer("position_ids", torch.arange(self.num_positions).expand((1, -1)))
def forward(self, pixel_values: torch.FloatTensor) -> torch.Tensor:
batch_size = pixel_values.shape[0]
patch_embeds = self.patch_embedding(pixel_values) # shape = [*, width, grid, grid]
patch_embeds = patch_embeds.flatten(2).transpose(1, 2)
class_embeds = self.class_embedding.expand(batch_size, 1, -1)
embeddings = torch.cat([class_embeds, patch_embeds], dim=1)
embeddings = embeddings + self.position_embedding(self.position_ids)
return embeddings
class AltCLIPPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = AltCLIPConfig
base_model_prefix = "altclip"
supports_gradient_checkpointing = True
_keys_to_ignore_on_load_missing = [r"position_ids"]
def _init_weights(self, module):
"""Initialize the weights"""
factor = self.config.initializer_factor
if isinstance(module, AltCLIPVisionEmbeddings):
factor = self.config.initializer_factor
nn.init.normal_(module.class_embedding, mean=0.0, std=module.embed_dim**-0.5 * factor)
nn.init.normal_(module.patch_embedding.weight, std=module.config.initializer_range * factor)
nn.init.normal_(module.position_embedding.weight, std=module.config.initializer_range * factor)
elif isinstance(module, AltCLIPAttention):
factor = self.config.initializer_factor
in_proj_std = (module.embed_dim**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
out_proj_std = (module.embed_dim**-0.5) * factor
nn.init.normal_(module.q_proj.weight, std=in_proj_std)
nn.init.normal_(module.k_proj.weight, std=in_proj_std)
nn.init.normal_(module.v_proj.weight, std=in_proj_std)
nn.init.normal_(module.out_proj.weight, std=out_proj_std)
elif isinstance(module, AltCLIPMLP):
factor = self.config.initializer_factor
in_proj_std = (
(module.config.hidden_size**-0.5) * ((2 * module.config.num_hidden_layers) ** -0.5) * factor
)
fc_std = (2 * module.config.hidden_size) ** -0.5 * factor
nn.init.normal_(module.fc1.weight, std=fc_std)
nn.init.normal_(module.fc2.weight, std=in_proj_std)
elif isinstance(module, AltCLIPModel):
nn.init.normal_(
module.text_projection.weight,
std=module.text_embed_dim**-0.5 * self.config.initializer_factor,
)
module.text_projection._is_hf_initialized = True
nn.init.normal_(
module.visual_projection.weight,
std=module.vision_embed_dim**-0.5 * self.config.initializer_factor,
)
module.visual_projection._is_hf_initialized = True
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
elif isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_factor)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_factor)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, AltCLIPEncoder):
module.gradient_checkpointing = value
if isinstance(module, AltRobertaEncoder):
module.gradient_checkpointing = value
# Copied from transformers.models.clip.modeling_clip.CLIPVisionTransformer with CLIPVisionTransformer->AltCLIPVisionTransformer,CLIPVisionConfig->AltCLIPVisionConfig,CLIPVisionEmbeddings->AltCLIPVisionEmbeddings,CLIPEncoder->AltCLIPEncoder,CLIP_VISION_INPUTS_DOCSTRING->ALTCLIP_VISION_INPUTS_DOCSTRING
class AltCLIPVisionTransformer(nn.Module):
def __init__(self, config: AltCLIPVisionConfig):
super().__init__()
self.config = config
embed_dim = config.hidden_size
self.embeddings = AltCLIPVisionEmbeddings(config)
self.pre_layrnorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
self.encoder = AltCLIPEncoder(config)
self.post_layernorm = nn.LayerNorm(embed_dim, eps=config.layer_norm_eps)
@add_start_docstrings_to_model_forward(ALTCLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=AltCLIPVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
hidden_states = self.embeddings(pixel_values)
hidden_states = self.pre_layrnorm(hidden_states)
encoder_outputs = self.encoder(
inputs_embeds=hidden_states,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
last_hidden_state = encoder_outputs[0]
pooled_output = last_hidden_state[:, 0, :]
pooled_output = self.post_layernorm(pooled_output)
if not return_dict:
return (last_hidden_state, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=last_hidden_state,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
class AltCLIPVisionModel(AltCLIPPreTrainedModel):
config_class = AltCLIPVisionConfig
main_input_name = "pixel_values"
def __init__(self, config: AltCLIPVisionConfig):
super().__init__(config)
self.vision_model = AltCLIPVisionTransformer(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.vision_model.embeddings.patch_embedding
@add_start_docstrings_to_model_forward(ALTCLIP_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=AltCLIPVisionConfig)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, AltCLIPVisionModel
>>> model = AltCLIPVisionModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
return self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
class AltRobertaModel(AltCLIPPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in *Attention is
all you need*_ by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit, Llion Jones, Aidan N. Gomez, Lukasz
Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
.. _*Attention is all you need*: https://arxiv.org/abs/1706.03762
"""
config_class = AltCLIPTextConfig
# Copied from transformers.models.bert.modeling_bert.BertModel.__init__ with Bert->AltRoberta
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = AltRobertaEmbeddings(config)
self.encoder = AltRobertaEncoder(config)
self.pooler = AltRobertaPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
# Copied from transformers.models.bert.modeling_bert.BertModel.forward
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPoolingAndCrossAttentions]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
if token_type_ids is None:
if hasattr(self.embeddings, "token_type_ids"):
buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
class AltCLIPTextModel(AltCLIPPreTrainedModel):
config_class = AltCLIPTextConfig
def __init__(self, config):
super().__init__(config)
self.roberta = AltRobertaModel(config, add_pooling_layer=False)
self.transformation = nn.Linear(config.hidden_size, config.project_dim)
self.pre_LN = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.post_init()
def get_input_embeddings(self) -> nn.Module:
return self.roberta.embeddings.word_embeddings
def set_input_embeddings(self, value: nn.Embedding) -> None:
self.roberta.embeddings.word_embeddings = value
def resize_token_embeddings(self, new_num_tokens: Optional[int] = None) -> nn.Embedding:
return super().resize_token_embeddings(new_num_tokens)
@add_start_docstrings_to_model_forward(ALTCLIP_TEXT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=BaseModelOutputWithPoolingAndProjection, config_class=AltCLIPTextConfig)
def forward(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
token_type_ids: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
inputs_embeds: Optional[torch.Tensor] = None,
encoder_hidden_states: Optional[torch.Tensor] = None,
encoder_attention_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
return_dict: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
):
r"""
Returns:
Examples:
```python
>>> from transformers import AutoProcessor, AltCLIPTextModel
>>> model = AltCLIPTextModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> texts = ["it's a cat", "it's a dog"]
>>> inputs = processor(text=texts, padding=True, return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_state = outputs.last_hidden_state
>>> pooled_output = outputs.pooler_output # pooled CLS states
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.roberta(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# last module outputs
sequence_output = outputs[0]
# project every module
sequence_output = self.pre_LN(sequence_output)
# pooler
projection_state = self.transformation(sequence_output)
pooler_output = projection_state[:, 0]
if not return_dict:
return (projection_state, pooler_output) + outputs[2:4]
return BaseModelOutputWithPoolingAndProjection(
last_hidden_state=projection_state,
pooler_output=pooler_output,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class AltCLIPModel(AltCLIPPreTrainedModel):
config_class = AltCLIPConfig
def __init__(self, config: AltCLIPConfig):
super().__init__(config)
if not isinstance(config.vision_config, AltCLIPVisionConfig):
raise ValueError(
"config.vision_config is expected to be of type AltCLIPVisionConfig but is of type"
f" {type(config.vision_config)}."
)
if not isinstance(config.text_config, AltCLIPTextConfig):
raise ValueError(
"config.text_config is expected to be of type AltCLIPTextConfig but is of type"
f" {type(config.text_config)}."
)
text_config = config.text_config
vision_config = config.vision_config
self.projection_dim = config.projection_dim
self.text_embed_dim = text_config.project_dim
self.vision_embed_dim = vision_config.hidden_size
self.text_model = AltCLIPTextModel(text_config)
self.vision_model = AltCLIPVisionTransformer(vision_config)
self.visual_projection = nn.Linear(self.vision_embed_dim, self.projection_dim, bias=False)
self.text_projection = nn.Linear(self.text_embed_dim, self.projection_dim, bias=False)
self.logit_scale = nn.Parameter(torch.ones([]) * self.config.logit_scale_init_value)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(ALTCLIP_TEXT_INPUTS_DOCSTRING)
def get_text_features(
self,
input_ids: Optional[torch.Tensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.Tensor] = None,
token_type_ids=None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
text_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The text embeddings obtained by
applying the projection layer to the pooled output of [`AltCLIPTextModel`].
Examples:
```python
>>> from transformers import AutoProcessor, AltCLIPModel
>>> model = AltCLIPModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> inputs = processor(text=["a photo of a cat", "a photo of a dog"], padding=True, return_tensors="pt")
>>> text_features = model.get_text_features(**inputs)
```"""
# Use AltCLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
token_type_ids=token_type_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = text_outputs[1]
text_features = self.text_projection(pooled_output)
return text_features
@add_start_docstrings_to_model_forward(ALTCLIP_VISION_INPUTS_DOCSTRING)
def get_image_features(
self,
pixel_values: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> torch.FloatTensor:
r"""
Returns:
image_features (`torch.FloatTensor` of shape `(batch_size, output_dim`): The image embeddings obtained by
applying the projection layer to the pooled output of [`AltCLIPVisionModel`].
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, AltCLIPModel
>>> model = AltCLIPModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(images=image, return_tensors="pt")
>>> image_features = model.get_image_features(**inputs)
```"""
# Use AltCLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = vision_outputs[1] # pooled_output
image_features = self.visual_projection(pooled_output)
return image_features
@add_start_docstrings_to_model_forward(ALTCLIP_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=AltCLIPOutput, config_class=AltCLIPConfig)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
pixel_values: Optional[torch.FloatTensor] = None,
attention_mask: Optional[torch.Tensor] = None,
position_ids: Optional[torch.LongTensor] = None,
token_type_ids=None,
return_loss: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, AltCLIPOutput]:
r"""
Returns:
Examples:
```python
>>> from PIL import Image
>>> import requests
>>> from transformers import AutoProcessor, AltCLIPModel
>>> model = AltCLIPModel.from_pretrained("BAAI/AltCLIP")
>>> processor = AutoProcessor.from_pretrained("BAAI/AltCLIP")
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> inputs = processor(
... text=["a photo of a cat", "a photo of a dog"], images=image, return_tensors="pt", padding=True
... )
>>> outputs = model(**inputs)
>>> logits_per_image = outputs.logits_per_image # this is the image-text similarity score
>>> probs = logits_per_image.softmax(dim=1) # we can take the softmax to get the label probabilities
```"""
# Use AltCLIP model's config for some fields (if specified) instead of those of vision & text components.
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
text_outputs = self.text_model(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
vision_outputs = self.vision_model(
pixel_values=pixel_values,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
image_embeds = vision_outputs[1]
image_embeds = self.visual_projection(image_embeds)
text_embeds = text_outputs[1]
text_embeds = self.text_projection(text_embeds)
# normalized features
image_embeds = image_embeds / image_embeds.norm(p=2, dim=-1, keepdim=True)
text_embeds = text_embeds / text_embeds.norm(p=2, dim=-1, keepdim=True)
# cosine similarity as logits
logit_scale = self.logit_scale.exp()
logits_per_text = torch.matmul(text_embeds, image_embeds.t()) * logit_scale
logits_per_image = logits_per_text.T
loss = None
if return_loss:
loss = clip_loss(logits_per_text)
if not return_dict:
output = (logits_per_image, logits_per_text, text_embeds, image_embeds, text_outputs, vision_outputs)
return ((loss,) + output) if loss is not None else output
return AltCLIPOutput(
loss=loss,
logits_per_image=logits_per_image,
logits_per_text=logits_per_text,
text_embeds=text_embeds,
image_embeds=image_embeds,
text_model_output=text_outputs,
vision_model_output=vision_outputs,
)
# Copied from transformers.models.roberta.modeling_roberta.create_position_ids_from_input_ids
def create_position_ids_from_input_ids(input_ids, padding_idx, past_key_values_length=0):
"""
Replace non-padding symbols with their position numbers. Position numbers begin at padding_idx+1. Padding symbols
are ignored. This is modified from fairseq's `utils.make_positions`.
Args:
x: torch.Tensor x:
Returns: torch.Tensor
"""
# The series of casts and type-conversions here are carefully balanced to both work with ONNX export and XLA.
mask = input_ids.ne(padding_idx).int()
incremental_indices = (torch.cumsum(mask, dim=1).type_as(mask) + past_key_values_length) * mask
return incremental_indices.long() + padding_idx
|
27182812/ChatGLM-LLaMA-chinese-insturct | 15,995 | src/transformers/models/altclip/configuration_altclip.py | # coding=utf-8
# Copyright 2022 WenXiang ZhongzhiCheng LedellWu LiuGuang BoWenZhang and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" AltCLIP model configuration"""
import copy
import os
from typing import Union
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
ALTCLIP_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"BAAI/AltCLIP": "https://huggingface.co/BAAI/AltCLIP/resolve/main/config.json",
# See all AltCLIP models at https://huggingface.co/models?filter=altclip
}
class AltCLIPTextConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`AltCLIPTextModel`]. It is used to instantiate a
AltCLIP text model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the AltCLIP
[BAAI/AltCLIP](https://huggingface.co/BAAI/AltCLIP) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 250002):
Vocabulary size of the AltCLIP model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`AltCLIPTextModel`].
hidden_size (`int`, *optional*, defaults to 1024):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 24):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 16):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 4096):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `Callable`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 514):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed when calling [`AltCLIPTextModel`]
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-5):
The epsilon used by the layer normalization layers.
position_embedding_type (`str`, *optional*, defaults to `"absolute"`):
Type of position embedding. Choose one of `"absolute"`, `"relative_key"`, `"relative_key_query"`. For
positional embeddings use `"absolute"`. For more information on `"relative_key"`, please refer to
[Self-Attention with Relative Position Representations (Shaw et al.)](https://arxiv.org/abs/1803.02155).
For more information on `"relative_key_query"`, please refer to *Method 4* in [Improve Transformer Models
with Better Relative Position Embeddings (Huang et al.)](https://arxiv.org/abs/2009.13658).
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
project_dim (`int`, *optional*, defaults to 768):
The dimentions of the teacher model before the mapping layer.
Examples:
```python
>>> from transformers import AltCLIPTextModel, AltCLIPTextConfig
>>> # Initializing a AltCLIPTextConfig with BAAI/AltCLIP style configuration
>>> configuration = AltCLIPTextConfig()
>>> # Initializing a AltCLIPTextModel (with random weights) from the BAAI/AltCLIP style configuration
>>> model = AltCLIPTextModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "altclip_text_model"
def __init__(
self,
vocab_size=250002,
hidden_size=1024,
num_hidden_layers=24,
num_attention_heads=16,
intermediate_size=4096,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=514,
type_vocab_size=1,
initializer_range=0.02,
initializer_factor=0.02,
layer_norm_eps=1e-05,
pad_token_id=1,
bos_token_id=0,
eos_token_id=2,
position_embedding_type="absolute",
use_cache=True,
project_dim=768,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.type_vocab_size = type_vocab_size
self.initializer_range = initializer_range
self.initializer_factor = initializer_factor
self.layer_norm_eps = layer_norm_eps
self.position_embedding_type = position_embedding_type
self.use_cache = use_cache
self.project_dim = project_dim
class AltCLIPVisionConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`AltCLIPModel`]. It is used to instantiate an
AltCLIP model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the AltCLIP
[BAAI/AltCLIP](https://huggingface.co/BAAI/AltCLIP) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 32):
The size (resolution) of each patch.
hidden_act (`str` or `function`, *optional*, defaults to `"quick_gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` ``"quick_gelu"` are supported.
layer_norm_eps (`float`, *optional*, defaults to 1e-5):
The epsilon used by the layer normalization layers.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
initializer_factor (`float``, *optional*, defaults to 1):
A factor for initializing all weight matrices (should be kept to 1, used internally for initialization
testing).
Example:
```python
>>> from transformers import AltCLIPVisionConfig, AltCLIPVisionModel
>>> # Initializing a AltCLIPVisionConfig with BAAI/AltCLIP style configuration
>>> configuration = AltCLIPVisionConfig()
>>> # Initializing a AltCLIPVisionModel (with random weights) from the BAAI/AltCLIP style configuration
>>> model = AltCLIPVisionModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "altclip_vision_model"
def __init__(
self,
hidden_size=768,
intermediate_size=3072,
projection_dim=512,
num_hidden_layers=12,
num_attention_heads=12,
num_channels=3,
image_size=224,
patch_size=32,
hidden_act="quick_gelu",
layer_norm_eps=1e-5,
attention_dropout=0.0,
initializer_range=0.02,
initializer_factor=1.0,
**kwargs,
):
super().__init__(**kwargs)
self.hidden_size = hidden_size
self.intermediate_size = intermediate_size
self.projection_dim = projection_dim
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.num_channels = num_channels
self.patch_size = patch_size
self.image_size = image_size
self.initializer_range = initializer_range
self.initializer_factor = initializer_factor
self.attention_dropout = attention_dropout
self.layer_norm_eps = layer_norm_eps
self.hidden_act = hidden_act
@classmethod
def from_pretrained(cls, pretrained_model_name_or_path: Union[str, os.PathLike], **kwargs) -> "PretrainedConfig":
config_dict, kwargs = cls.get_config_dict(pretrained_model_name_or_path, **kwargs)
# get the vision config dict if we are loading from AltCLIPConfig
if config_dict.get("model_type") == "altclip":
config_dict = config_dict["vision_config"]
if "model_type" in config_dict and hasattr(cls, "model_type") and config_dict["model_type"] != cls.model_type:
logger.warning(
f"You are using a model of type {config_dict['model_type']} to instantiate a model of type "
f"{cls.model_type}. This is not supported for all configurations of models and can yield errors."
)
return cls.from_dict(config_dict, **kwargs)
class AltCLIPConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`AltCLIPModel`]. It is used to instantiate an
AltCLIP model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the AltCLIP
[BAAI/AltCLIP](https://huggingface.co/BAAI/AltCLIP) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
text_config (`dict`, *optional*):
Dictionary of configuration options used to initialize [`AltCLIPTextConfig`].
vision_config (`dict`, *optional*):
Dictionary of configuration options used to initialize [`AltCLIPVisionConfig`].
projection_dim (`int`, *optional*, defaults to 512):
Dimentionality of text and vision projection layers.
logit_scale_init_value (`float`, *optional*, defaults to 2.6592):
The inital value of the *logit_scale* paramter. Default is used as per the original CLIP implementation.
kwargs (*optional*):
Dictionary of keyword arguments.
Example:
```python
>>> from transformers import AltCLIPConfig, AltCLIPModel
>>> # Initializing a AltCLIPConfig with BAAI/AltCLIP style configuration
>>> configuration = AltCLIPConfig()
>>> # Initializing a AltCLIPModel (with random weights) from the BAAI/AltCLIP style configuration
>>> model = AltCLIPModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
>>> # We can also initialize a AltCLIPConfig from a AltCLIPTextConfig and a AltCLIPVisionConfig
>>> # Initializing a AltCLIPText and AltCLIPVision configuration
>>> config_text = AltCLIPTextConfig()
>>> config_vision = AltCLIPVisionConfig()
>>> config = AltCLIPConfig.from_text_vision_configs(config_text, config_vision)
```"""
model_type = "altclip"
is_composition = True
def __init__(
self, text_config=None, vision_config=None, projection_dim=768, logit_scale_init_value=2.6592, **kwargs
):
super().__init__(**kwargs)
# If `_config_dict` exist, we use them for the backward compatibility.
text_config_dict = kwargs.pop("text_config_dict", None)
vision_config_dict = kwargs.pop("vision_config_dict", None)
if text_config_dict is not None:
text_config = text_config_dict
if vision_config_dict is not None:
vision_config = vision_config_dict
if text_config is None:
text_config = {}
logger.info("text_config is None. Initializing the AltCLIPTextConfig with default values.")
if vision_config is None:
vision_config = {}
logger.info("vision_config is None. initializing the AltCLIPVisionConfig with default values.")
self.text_config = AltCLIPTextConfig(**text_config)
self.vision_config = AltCLIPVisionConfig(**vision_config)
self.projection_dim = projection_dim
self.logit_scale_init_value = logit_scale_init_value
self.initializer_factor = 1.0
@classmethod
def from_text_vision_configs(cls, text_config: AltCLIPTextConfig, vision_config: AltCLIPVisionConfig, **kwargs):
r"""
Instantiate a [`AltCLIPConfig`] (or a derived class) from altclip text model configuration and altclip vision
model configuration.
Returns:
[`AltCLIPConfig`]: An instance of a configuration object
"""
return cls(text_config=text_config.to_dict(), vision_config=vision_config.to_dict(), **kwargs)
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`].
Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = copy.deepcopy(self.__dict__)
output["text_config"] = self.text_config.to_dict()
output["vision_config"] = self.vision_config.to_dict()
output["model_type"] = self.__class__.model_type
return output
|
27182812/ChatGLM-LLaMA-chinese-insturct | 46,405 | src/transformers/models/opt/modeling_tf_opt.py | # coding=utf-8
# Copyright 2022 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" TF 2.0 OPT model."""
from typing import Optional, Tuple, Union
import numpy as np
import tensorflow as tf
from ...activations_tf import get_tf_activation
from ...modeling_tf_outputs import TFBaseModelOutputWithPast, TFCausalLMOutputWithPast
# Public API
from ...modeling_tf_utils import (
DUMMY_INPUTS,
TFCausalLanguageModelingLoss,
TFModelInputType,
TFPreTrainedModel,
TFSharedEmbeddings,
keras_serializable,
unpack_inputs,
)
from ...tf_utils import shape_list, stable_softmax
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_opt import OPTConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/opt-350m"
_CONFIG_FOR_DOC = "OPTConfig"
# Base model docstring
_EXPECTED_OUTPUT_SHAPE = [1, 8, 1024]
# Causal LM output
_CAUSAL_LM_EXPECTED_OUTPUT = "Hey, are you consciours? Can you talk to me?\nI'm not consciours, but I can talk to you."
LARGE_NEGATIVE = -1e8
# Copied from transformers.models.bart.modeling_tf_bart._make_causal_mask
def _make_causal_mask(input_ids_shape: tf.TensorShape, past_key_values_length: int = 0):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz = input_ids_shape[0]
tgt_len = input_ids_shape[1]
mask = tf.ones((tgt_len, tgt_len)) * LARGE_NEGATIVE
mask_cond = tf.range(shape_list(mask)[-1])
mask = tf.where(mask_cond < tf.reshape(mask_cond + 1, (shape_list(mask)[-1], 1)), 0.0, mask)
if past_key_values_length > 0:
mask = tf.concat([tf.zeros((tgt_len, past_key_values_length)), mask], axis=-1)
return tf.tile(mask[None, None, :, :], (bsz, 1, 1, 1))
# Copied from transformers.models.bart.modeling_tf_bart._expand_mask
def _expand_mask(mask: tf.Tensor, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
src_len = shape_list(mask)[1]
tgt_len = tgt_len if tgt_len is not None else src_len
one_cst = tf.constant(1.0)
mask = tf.cast(mask, dtype=one_cst.dtype)
expanded_mask = tf.tile(mask[:, None, None, :], (1, 1, tgt_len, 1))
return (one_cst - expanded_mask) * LARGE_NEGATIVE
class TFOPTLearnedPositionalEmbedding(TFSharedEmbeddings):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def __init__(self, num_embeddings: int, embedding_dim: int, **kwargs):
# OPT is set up so that if padding_idx is specified then offset the embedding ids by 2
# and adjust num_embeddings appropriately. Other models don't have this hack
self.offset = 2
super().__init__(num_embeddings + self.offset, embedding_dim, **kwargs)
def call(self, attention_mask, past_key_values_length: int = 0):
"""`input_ids_shape` is expected to be [bsz x seqlen]."""
attention_mask = tf.cast(attention_mask, tf.int64)
# create positions depending on attention_mask
positions = tf.math.cumsum(attention_mask, axis=1) * attention_mask - 1
# cut positions if `past_key_values_length` is > 0
positions = positions[:, past_key_values_length:]
return super().call(positions + self.offset)
# Copied from transformers.models.bart.modeling_tf_bart.TFBartAttention with Bart->OPT
class TFOPTAttention(tf.keras.layers.Layer):
"""Multi-headed attention from "Attention Is All You Need"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
**kwargs,
):
super().__init__(**kwargs)
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = tf.keras.layers.Dropout(dropout)
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="k_proj")
self.q_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="q_proj")
self.v_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="v_proj")
self.out_proj = tf.keras.layers.Dense(embed_dim, use_bias=bias, name="out_proj")
def _shape(self, tensor: tf.Tensor, seq_len: int, bsz: int):
return tf.transpose(tf.reshape(tensor, (bsz, seq_len, self.num_heads, self.head_dim)), (0, 2, 1, 3))
def call(
self,
hidden_states: tf.Tensor,
key_value_states: Optional[tf.Tensor] = None,
past_key_value: Optional[Tuple[Tuple[tf.Tensor]]] = None,
attention_mask: Optional[tf.Tensor] = None,
layer_head_mask: Optional[tf.Tensor] = None,
training: Optional[bool] = False,
) -> Tuple[tf.Tensor, Optional[tf.Tensor]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, embed_dim = shape_list(hidden_states)
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = tf.concat([past_key_value[0], key_states], axis=2)
value_states = tf.concat([past_key_value[1], value_states], axis=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = tf.reshape(self._shape(query_states, tgt_len, bsz), proj_shape)
key_states = tf.reshape(key_states, proj_shape)
value_states = tf.reshape(value_states, proj_shape)
src_len = shape_list(key_states)[1]
attn_weights = tf.matmul(query_states, key_states, transpose_b=True)
tf.debugging.assert_equal(
shape_list(attn_weights),
[bsz * self.num_heads, tgt_len, src_len],
message=(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {shape_list(attn_weights)}"
),
)
if attention_mask is not None:
tf.debugging.assert_equal(
shape_list(attention_mask),
[bsz, 1, tgt_len, src_len],
message=(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is"
f" {shape_list(attention_mask)}"
),
)
attention_mask = tf.cast(attention_mask, dtype=attn_weights.dtype)
attn_weights = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len)) + attention_mask
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_weights = stable_softmax(attn_weights, axis=-1)
if layer_head_mask is not None:
tf.debugging.assert_equal(
shape_list(layer_head_mask),
[self.num_heads],
message=(
f"Head mask for a single layer should be of size {(self.num_heads)}, but is"
f" {shape_list(layer_head_mask)}"
),
)
attn_weights = tf.reshape(layer_head_mask, (1, -1, 1, 1)) * tf.reshape(
attn_weights, (bsz, self.num_heads, tgt_len, src_len)
)
attn_weights = tf.reshape(attn_weights, (bsz * self.num_heads, tgt_len, src_len))
attn_probs = self.dropout(attn_weights, training=training)
attn_output = tf.matmul(attn_probs, value_states)
tf.debugging.assert_equal(
shape_list(attn_output),
[bsz * self.num_heads, tgt_len, self.head_dim],
message=(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {shape_list(attn_output)}"
),
)
attn_output = tf.transpose(
tf.reshape(attn_output, (bsz, self.num_heads, tgt_len, self.head_dim)), (0, 2, 1, 3)
)
attn_output = tf.reshape(attn_output, (bsz, tgt_len, embed_dim))
attn_output = self.out_proj(attn_output)
attn_weights: tf.Tensor = tf.reshape(attn_weights, (bsz, self.num_heads, tgt_len, src_len))
return attn_output, attn_weights, past_key_value
class TFOPTDecoderLayer(tf.keras.layers.Layer):
def __init__(self, config: OPTConfig, **kwargs):
super().__init__(**kwargs)
self.do_layer_norm_before = config.do_layer_norm_before
self.embed_dim = config.hidden_size
self.self_attn = TFOPTAttention(
embed_dim=self.embed_dim,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
name="self_attn",
is_decoder=True,
)
self.dropout = tf.keras.layers.Dropout(config.dropout)
self.activation_fn = get_tf_activation(config.activation_function)
self.self_attn_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="self_attn_layer_norm")
self.fc1 = tf.keras.layers.Dense(config.ffn_dim, name="fc1")
self.fc2 = tf.keras.layers.Dense(self.embed_dim, name="fc2")
self.final_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="final_layer_norm")
def call(
self,
hidden_states: tf.Tensor,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
layer_head_mask: Optional[tf.Tensor] = None,
past_key_value: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
training: Optional[bool] = False,
output_attentions: Optional[bool] = False,
use_cache: Optional[bool] = False,
) -> Tuple[tf.Tensor, tf.Tensor, Tuple[Tuple[tf.Tensor]]]:
"""
Args:
hidden_states (`tf.Tensor`): input to the layer of shape `(seq_len, batch, embed_dim)`
attention_mask (`tf.Tensor`, *optional*): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`tf.Tensor`, *optional*): mask for attention heads in a given layer of size
`(decoder_attention_heads,)`
past_key_value (`Tuple(tf.Tensor)`, *optional*): cached past key and value projection states
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
residual = hidden_states
# 125m, 1.7B, ..., 175B applies layer norm BEFORE attention
if self.do_layer_norm_before:
hidden_states = self.self_attn_layer_norm(hidden_states)
# Self Attention
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
# add present self-attn cache to positions 1,2 of present_key_value tuple
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=self_attn_past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
# 350m applies layer norm AFTER attention
if not self.do_layer_norm_before:
hidden_states = self.self_attn_layer_norm(hidden_states)
# Fully Connected
residual = hidden_states
# 125m, 1.7B, ..., 175B applies layer norm BEFORE attention
if self.do_layer_norm_before:
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout(hidden_states, training=training)
hidden_states = residual + hidden_states
# 350m applies layer norm AFTER attention
if not self.do_layer_norm_before:
hidden_states = self.final_layer_norm(hidden_states)
return (hidden_states, self_attn_weights, present_key_value)
OPT_START_DOCSTRING = r"""
This model inherits from [`TFPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a [tf.keras.Model](https://www.tensorflow.org/api_docs/python/tf/keras/Model) subclass. Use it
as a regular TF 2.0 Keras Model and refer to the TF 2.0 documentation for all matter related to general usage and
behavior.
<Tip>
TensorFlow models and layers in `transformers` accept two formats as input:
- having all inputs as keyword arguments (like PyTorch models), or
- having all inputs as a list, tuple or dict in the first positional argument.
The reason the second format is supported is that Keras methods prefer this format when passing inputs to models
and layers. Because of this support, when using methods like `model.fit()` things should "just work" for you - just
pass your inputs and labels in any format that `model.fit()` supports! If, however, you want to use the second
format outside of Keras methods like `fit()` and `predict()`, such as when creating your own layers or models with
the Keras `Functional` API, there are three possibilities you can use to gather all the input Tensors in the first
positional argument:
- a single Tensor with `input_ids` only and nothing else: `model(input_ids)`
- a list of varying length with one or several input Tensors IN THE ORDER given in the docstring:
`model([input_ids, attention_mask])` or `model([input_ids, attention_mask, token_type_ids])`
- a dictionary with one or several input Tensors associated to the input names given in the docstring:
`model({"input_ids": input_ids, "token_type_ids": token_type_ids})`
Note that when creating models and layers with
[subclassing](https://keras.io/guides/making_new_layers_and_models_via_subclassing/) then you don't need to worry
about any of this, as you can just pass inputs like you would to any other Python function!
</Tip>
Args:
config ([`OPTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~TFPreTrainedModel.from_pretrained`] method to load the model weights.
"""
@add_start_docstrings(
"The bare OPT Model outputting raw hidden-states without any specific head on top.",
OPT_START_DOCSTRING,
)
class TFOPTPreTrainedModel(TFPreTrainedModel):
"""
TFOPT Pretrained Model that inheritates from transformers.TFPreTrainedModel
Args:
config: OPTConfig
"""
config_class = OPTConfig
base_model_prefix = "model"
@property
def dummy_inputs(self):
pad_token = 1
input_ids = tf.convert_to_tensor(DUMMY_INPUTS, dtype=tf.int32)
dummy_inputs = {
"attention_mask": tf.cast(input_ids != pad_token, tf.int32),
"input_ids": input_ids,
}
return dummy_inputs
@tf.function(
input_signature=[
{
"input_ids": tf.TensorSpec((None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None), tf.int32, name="attention_mask"),
}
]
)
def serving(self, inputs):
output = self.call(inputs)
return self.serving_output(output)
OPT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`tf.Tensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`tf.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers`)
contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*, defaults to `True`):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`). Set to `False` during training, `True` during generation
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail. This argument can be used only in eager mode, in graph mode the value in the
config will be used instead.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail. This argument can be used only in eager mode, in graph mode the value in the config will be
used instead.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple. This argument can be used in
eager mode, in graph mode the value will always be set to True.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
@keras_serializable
class TFOPTDecoder(tf.keras.layers.Layer):
config_class = OPTConfig
def __init__(self, config: OPTConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.padding_idx = config.pad_token_id
self.layerdrop = config.layerdrop
num_embeddings = config.max_position_embeddings
self.embed_tokens = TFSharedEmbeddings(
config.vocab_size, config.word_embed_proj_dim, config.pad_token_id, name="embed_tokens"
)
self.embed_positions = TFOPTLearnedPositionalEmbedding(
num_embeddings,
config.hidden_size,
name="embed_positions",
)
# Note that the only purpose of `config._remove_final_layer_norm` is to keep backward compatibility
# with checkpoints that have been fine-tuned before transformers v4.20.1
# see https://github.com/facebookresearch/metaseq/pull/164
if config.do_layer_norm_before and not config._remove_final_layer_norm:
self.final_layer_norm = tf.keras.layers.LayerNormalization(epsilon=1e-5, name="final_layer_norm")
else:
self.final_layer_norm = None
if config.word_embed_proj_dim != config.hidden_size:
self.project_out = tf.keras.layers.Dense(config.word_embed_proj_dim, name="project_out", use_bias=False)
self.project_in = tf.keras.layers.Dense(config.hidden_size, name="project_in", use_bias=False)
else:
self.project_in = None
self.project_out = None
self.layers = [TFOPTDecoderLayer(config, name=f"layers.{i}") for i in range(config.num_hidden_layers)]
self.dropout = tf.keras.layers.Dropout(config.dropout)
def get_embed_tokens(self):
return self.embed_tokens
def set_embed_tokens(self, embed_tokens):
self.embed_tokens = embed_tokens
def set_input_embeddings(self, new_embeddings):
self.embed_tokens.vocab_size = new_embeddings.shape[0]
self.embed_tokens.weight = new_embeddings
def get_input_embeddings(self):
return self.embed_tokens
def _prepare_decoder_attention_mask(self, attention_mask, input_shape, past_key_values_length):
# create causal mask
# # [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
combined_attention_mask = None
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(input_shape, past_key_values_length=past_key_values_length)
else:
combined_attention_mask = _expand_mask(
tf.ones((input_shape[0], input_shape[1] + past_key_values_length)), tgt_len=input_shape[-1]
)
if attention_mask is not None:
combined_attention_mask = combined_attention_mask + _expand_mask(attention_mask, tgt_len=input_shape[-1])
return combined_attention_mask
@unpack_inputs
def call(
self,
input_ids: Optional[TFModelInputType] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPast, Tuple[tf.Tensor]]:
r"""
Args:
input_ids (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`tf.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`tf.Tensor` of shape `(decoder_layers, decoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`Tuple[Tuple[tf.Tensor]]` of length `config.n_layers` with each tuple having 2 tuples each of which has 2 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden-states of the attention blocks. Can be used to speed up
decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`tf.Tensor` of
shape `(batch_size, sequence_length, hidden_size)`, *optional*): Optionally, instead of passing
`input_ids` you can choose to directly pass an embedded representation. This is useful if you want more
control over how to convert `input_ids` indices into associated vectors than the model's internal
embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
training (`bool`, *optional*, defaults to `False`):
Whether or not to use the model in training mode (some modules like dropout modules have different
behaviors between training and evaluation).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
past_key_values_length = shape_list(past_key_values[0][0])[2] if past_key_values is not None else 0
if inputs_embeds is None:
# Note: tf.gather, on which the embedding layer is based, won't check positive out of bound
# indices on GPU, returning zeros instead. This is a dangerous silent behavior.
tf.debugging.assert_less(
input_ids,
tf.cast(self.embed_tokens.vocab_size, dtype=input_ids.dtype),
message=(
"input_ids must be smaller than the embedding layer's input dimension (got"
f" {tf.math.reduce_max(input_ids)} >= {self.embed_tokens.vocab_size})"
),
)
inputs_embeds = self.embed_tokens(input_ids)
if attention_mask is None:
attention_mask = tf.ones(inputs_embeds.shape[:2], dtype=tf.bool)
pos_embeds = self.embed_positions(attention_mask, past_key_values_length)
attention_mask = self._prepare_decoder_attention_mask(attention_mask, input_shape, past_key_values_length)
if self.project_in is not None:
inputs_embeds = self.project_in(inputs_embeds)
hidden_states = inputs_embeds + pos_embeds
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
present_key_values = () if use_cache else None
# check if head_mask and cross_attn_head_mask have a correct number of layers specified if desired
for attn_mask_name, attn_mask in [("head_mask", head_mask)]:
if attn_mask is not None:
tf.debugging.assert_equal(
shape_list(attn_mask)[0],
len(self.layers),
message=(
f"The {attn_mask_name} should be specified for {len(self.layers)} layers, but it is for"
f" {shape_list(attn_mask)[0]}."
),
)
for idx, decoder_layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states += (hidden_states,)
past_key_value = past_key_values[idx] if past_key_values is not None else None
hidden_states, layer_self_attn, present_key_value = decoder_layer(
hidden_states,
attention_mask=attention_mask,
layer_head_mask=head_mask[idx] if head_mask is not None else None,
past_key_value=past_key_value,
)
if use_cache:
present_key_values += (present_key_value,)
if output_attentions:
all_self_attns += (layer_self_attn,)
if self.final_layer_norm is not None:
hidden_states = self.final_layer_norm(hidden_states)
if self.project_out is not None:
hidden_states = self.project_out(hidden_states)
if output_hidden_states:
all_hidden_states += (hidden_states,)
if not return_dict:
return tuple(
v for v in [hidden_states, present_key_values, all_hidden_states, all_self_attns] if v is not None
)
else:
return TFBaseModelOutputWithPast(
last_hidden_state=hidden_states,
past_key_values=present_key_values,
hidden_states=all_hidden_states,
attentions=all_self_attns,
)
@keras_serializable
class TFOPTMainLayer(tf.keras.layers.Layer):
config_class = OPTConfig
def __init__(self, config: OPTConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.decoder = TFOPTDecoder(config, name="decoder")
def get_input_embeddings(self):
return self.decoder.embed_tokens
def set_input_embeddings(self, new_embeddings):
self.decoder.set_input_embeddings(new_embeddings)
@unpack_inputs
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
**kwargs,
) -> Union[TFBaseModelOutputWithPast, Tuple[tf.Tensor]]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.decoder(
input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
if not return_dict:
return outputs
return TFBaseModelOutputWithPast(
last_hidden_state=outputs.last_hidden_state,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"The bare TF OPT Model outputting raw hidden-states without any specific head on top.",
OPT_START_DOCSTRING,
)
@keras_serializable
class TFOPTModel(TFOPTPreTrainedModel):
config_class = OPTConfig
def __init__(self, config: OPTConfig, **kwargs):
super().__init__(config, **kwargs)
self.config = config
self.model = TFOPTMainLayer(config, name="model")
def get_input_embeddings(self):
return self.model.decoder.embed_tokens
def set_input_embeddings(self, new_embeddings):
self.model.set_input_embeddings(new_embeddings)
@unpack_inputs
@add_start_docstrings_to_model_forward(OPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFBaseModelOutputWithPast,
config_class=_CONFIG_FOR_DOC,
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
**kwargs,
) -> Union[TFBaseModelOutputWithPast, Tuple[tf.Tensor]]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.model(
input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
if not return_dict:
return outputs
return TFBaseModelOutputWithPast(
last_hidden_state=outputs.last_hidden_state,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def serving_output(self, output):
pkv = tf.tuple(output.past_key_values)[1] if self.config.use_cache else None
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFBaseModelOutputWithPast(
last_hidden_state=output.last_hidden_state,
past_key_values=pkv,
hidden_states=hs,
attentions=attns,
)
@add_start_docstrings(
"""
The OPT Model transformer with a language modeling head on top.
""",
OPT_START_DOCSTRING,
)
@keras_serializable
class TFOPTForCausalLM(TFOPTPreTrainedModel, TFCausalLanguageModelingLoss):
config_class = OPTConfig
def __init__(self, config: OPTConfig, **kwargs):
super().__init__(config, **kwargs)
self.config = config
self.model = TFOPTMainLayer(config, name="model")
def get_output_embeddings(self):
return self.model.get_input_embeddings()
def prepare_inputs_for_generation(self, inputs, past_key_values=None, use_cache=None, **kwargs):
attention_mask = kwargs.get("attention_mask", None)
# only last token for inputs_ids if past is defined in kwargs
if past_key_values:
inputs = tf.expand_dims(inputs[:, -1], -1)
return {
"input_ids": inputs,
"attention_mask": attention_mask,
"past_key_values": past_key_values,
"use_cache": use_cache,
}
@unpack_inputs
@replace_return_docstrings(output_type=TFCausalLMOutputWithPast, config_class=_CONFIG_FOR_DOC)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFCausalLMOutputWithPast,
config_class=_CONFIG_FOR_DOC,
expected_output=_CAUSAL_LM_EXPECTED_OUTPUT,
)
def call(
self,
input_ids: Optional[TFModelInputType] = None,
past_key_values: Optional[Tuple[Tuple[Union[np.ndarray, tf.Tensor]]]] = None,
attention_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
position_ids: Optional[Union[np.ndarray, tf.Tensor]] = None,
head_mask: Optional[Union[np.ndarray, tf.Tensor]] = None,
inputs_embeds: Optional[Union[np.ndarray, tf.Tensor]] = None,
labels: Optional[Union[np.ndarray, tf.Tensor]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
**kwargs,
) -> Union[TFCausalLMOutputWithPast, Tuple[tf.Tensor]]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(num_hidden_layers, num_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`. The two additional
tensors are only required when the model is used as a decoder in a Sequence to Sequence model.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.model(
input_ids=input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
logits = self.model.decoder.embed_tokens(outputs[0], mode="linear")
loss = None
if labels is not None:
# shift labels to the left and cut last logit token
shifted_logits = logits[:, :-1]
labels = labels[:, 1:]
loss = self.hf_compute_loss(labels, shifted_logits)
if not return_dict:
output = (logits,) + outputs[1:]
return ((loss,) + output) if loss is not None else output
return TFCausalLMOutputWithPast(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def serving_output(self, output):
pkv = tf.tuple(output.past_key_values)[1] if self.config.use_cache else None
hs = tf.convert_to_tensor(output.hidden_states) if self.config.output_hidden_states else None
attns = tf.convert_to_tensor(output.attentions) if self.config.output_attentions else None
return TFCausalLMOutputWithPast(
past_key_values=pkv,
hidden_states=hs,
attentions=attns,
loss=output.loss,
logits=output.logits,
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,977 | src/transformers/models/opt/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {"configuration_opt": ["OPT_PRETRAINED_CONFIG_ARCHIVE_MAP", "OPTConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_opt"] = [
"OPT_PRETRAINED_MODEL_ARCHIVE_LIST",
"OPTForCausalLM",
"OPTModel",
"OPTPreTrainedModel",
"OPTForSequenceClassification",
"OPTForQuestionAnswering",
]
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_tf_opt"] = ["TFOPTForCausalLM", "TFOPTModel", "TFOPTPreTrainedModel"]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_opt"] = [
"FlaxOPTForCausalLM",
"FlaxOPTModel",
"FlaxOPTPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_opt import OPT_PRETRAINED_CONFIG_ARCHIVE_MAP, OPTConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_opt import (
OPT_PRETRAINED_MODEL_ARCHIVE_LIST,
OPTForCausalLM,
OPTForQuestionAnswering,
OPTForSequenceClassification,
OPTModel,
OPTPreTrainedModel,
)
try:
if not is_tf_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_tf_opt import TFOPTForCausalLM, TFOPTModel, TFOPTPreTrainedModel
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_opt import FlaxOPTForCausalLM, FlaxOPTModel, FlaxOPTPreTrainedModel
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 31,547 | src/transformers/models/opt/modeling_flax_opt.py | # coding=utf-8
# Copyright 2022 The Fairseq Authors and The Google Flax Team Authors And The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Flax OPT model."""
from functools import partial
from typing import Optional, Tuple
import flax.linen as nn
import jax
import jax.numpy as jnp
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen import combine_masks, make_causal_mask
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from jax import lax
from jax.random import PRNGKey
from ...modeling_flax_outputs import FlaxBaseModelOutput, FlaxMaskedLMOutput
from ...modeling_flax_utils import ACT2FN, FlaxPreTrainedModel, append_call_sample_docstring
from ...utils import add_start_docstrings, logging
from .configuration_opt import OPTConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/opt-350m"
_CONFIG_FOR_DOC = "OPTConfig"
OPT_START_DOCSTRING = r"""
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a Flax Linen
[flax.nn.Module](https://flax.readthedocs.io/en/latest/_autosummary/flax.nn.module.html) subclass. Use it as a
regular Flax Module and refer to the Flax documentation for all matter related to general usage and behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`OPTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
OPT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`jnp.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
position_ids (`numpy.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
# Copied from transformers.models.bart.modeling_flax_bart.FlaxBartAttention with Bart->OPT
class FlaxOPTAttention(nn.Module):
config: OPTConfig
embed_dim: int
num_heads: int
dropout: float = 0.0
causal: bool = False
bias: bool = True
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self) -> None:
self.head_dim = self.embed_dim // self.num_heads
if self.head_dim * self.num_heads != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {self.num_heads})."
)
dense = partial(
nn.Dense,
self.embed_dim,
use_bias=self.bias,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
self.q_proj, self.k_proj, self.v_proj = dense(), dense(), dense()
self.out_proj = dense()
self.dropout_layer = nn.Dropout(rate=self.dropout)
if self.causal:
self.causal_mask = make_causal_mask(
jnp.ones((1, self.config.max_position_embeddings), dtype="bool"), dtype="bool"
)
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.num_heads, self.head_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.embed_dim,))
@nn.compact
def _concatenate_to_cache(self, key, value, query, attention_mask):
"""
This function takes projected key, value states from a single input token and concatenates the states to cached
states from previous steps. This function is slighly adapted from the official Flax repository:
https://github.com/google/flax/blob/491ce18759622506588784b4fca0e4bf05f8c8cd/flax/linen/attention.py#L252
"""
# detect if we're initializing by absence of existing cache data.
is_initialized = self.has_variable("cache", "cached_key")
cached_key = self.variable("cache", "cached_key", jnp.zeros, key.shape, key.dtype)
cached_value = self.variable("cache", "cached_value", jnp.zeros, value.shape, value.dtype)
cache_index = self.variable("cache", "cache_index", lambda: jnp.array(0, dtype=jnp.int32))
if is_initialized:
*batch_dims, max_length, num_heads, depth_per_head = cached_key.value.shape
# update key, value caches with our new 1d spatial slices
cur_index = cache_index.value
indices = (0,) * len(batch_dims) + (cur_index, 0, 0)
key = lax.dynamic_update_slice(cached_key.value, key, indices)
value = lax.dynamic_update_slice(cached_value.value, value, indices)
cached_key.value = key
cached_value.value = value
num_updated_cache_vectors = query.shape[1]
cache_index.value = cache_index.value + num_updated_cache_vectors
# causal mask for cached decoder self-attention: our single query position should only attend to those key positions that have already been generated and cached, not the remaining zero elements.
pad_mask = jnp.broadcast_to(
jnp.arange(max_length) < cur_index + num_updated_cache_vectors,
tuple(batch_dims) + (1, num_updated_cache_vectors, max_length),
)
attention_mask = combine_masks(pad_mask, attention_mask)
return key, value, attention_mask
def __call__(
self,
hidden_states: jnp.ndarray,
key_value_states: Optional[jnp.ndarray] = None,
attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
) -> Tuple[jnp.ndarray]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
batch_size = hidden_states.shape[0]
# get query proj
query_states = self.q_proj(hidden_states)
# get key, value proj
if is_cross_attention:
# cross_attentions
key_states = self.k_proj(key_value_states)
value_states = self.v_proj(key_value_states)
else:
# self_attention
key_states = self.k_proj(hidden_states)
value_states = self.v_proj(hidden_states)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# handle cache prepare causal attention mask
if self.causal:
query_length, key_length = query_states.shape[1], key_states.shape[1]
if self.has_variable("cache", "cached_key"):
mask_shift = self.variables["cache"]["cache_index"]
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
causal_mask = lax.dynamic_slice(
self.causal_mask, (0, 0, mask_shift, 0), (1, 1, query_length, max_decoder_length)
)
else:
causal_mask = self.causal_mask[:, :, :query_length, :key_length]
causal_mask = jnp.broadcast_to(causal_mask, (batch_size,) + causal_mask.shape[1:])
# combine masks if needed
if attention_mask is not None and self.causal:
attention_mask = jnp.broadcast_to(jnp.expand_dims(attention_mask, axis=(-3, -2)), causal_mask.shape)
attention_mask = combine_masks(attention_mask, causal_mask)
elif self.causal:
attention_mask = causal_mask
elif attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
# During fast autoregressive decoding, we feed one position at a time,
# and cache the keys and values step by step.
if self.causal and (self.has_variable("cache", "cached_key") or init_cache):
key_states, value_states, attention_mask = self._concatenate_to_cache(
key_states, value_states, query_states, attention_mask
)
# Convert the boolean attention mask to an attention bias.
if attention_mask is not None:
# attention mask in the form of attention bias
attention_bias = lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, jnp.finfo(self.dtype).min).astype(self.dtype),
)
else:
attention_bias = None
dropout_rng = None
if not deterministic and self.dropout > 0.0:
dropout_rng = self.make_rng("dropout")
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=attention_bias,
dropout_rng=dropout_rng,
dropout_rate=self.dropout,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
precision=None,
)
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
attn_output = self._merge_heads(attn_output)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights
class FlaxOPTDecoderLayer(nn.Module):
config: OPTConfig
dtype: jnp.dtype = jnp.float32
def setup(self) -> None:
self.embed_dim = self.config.hidden_size
self.self_attn = FlaxOPTAttention(
config=self.config,
embed_dim=self.embed_dim,
num_heads=self.config.num_attention_heads,
dropout=self.config.attention_dropout,
causal=True,
dtype=self.dtype,
)
self.do_layer_norm_before = self.config.do_layer_norm_before
self.dropout_layer = nn.Dropout(rate=self.config.dropout)
self.activation_fn = ACT2FN[self.config.activation_function]
self.self_attn_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
self.fc1 = nn.Dense(
self.config.ffn_dim,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
self.fc2 = nn.Dense(
self.embed_dim, dtype=self.dtype, kernel_init=jax.nn.initializers.normal(self.config.init_std)
)
self.final_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
def __call__(
self,
hidden_states: jnp.ndarray,
attention_mask: jnp.ndarray,
init_cache: bool = False,
output_attentions: bool = True,
deterministic: bool = True,
) -> Tuple[jnp.ndarray]:
residual = hidden_states
# 125m, 1.7B, ..., 175B applies layer norm BEFORE attention
if self.do_layer_norm_before:
hidden_states = self.self_attn_layer_norm(hidden_states)
# Self Attention
hidden_states, self_attn_weights = self.self_attn(
hidden_states=hidden_states,
attention_mask=attention_mask,
init_cache=init_cache,
deterministic=deterministic,
)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = residual + hidden_states
# 350m applies layer norm AFTER attention
if not self.do_layer_norm_before:
hidden_states = self.self_attn_layer_norm(hidden_states)
# Fully Connected
hidden_states_shape = hidden_states.shape
hidden_states = hidden_states.reshape(-1, hidden_states.shape[-1])
residual = hidden_states
# 125m, 1.7B, ..., 175B applies layer norm BEFORE attention
if self.do_layer_norm_before:
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
hidden_states = self.dropout_layer(hidden_states, deterministic=deterministic)
hidden_states = (residual + hidden_states).reshape(hidden_states_shape)
# 350m applies layer norm AFTER attention
if not self.do_layer_norm_before:
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights,)
return outputs
class FlaxOPTDecoderLayerCollection(nn.Module):
config: OPTConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.layers = [
FlaxOPTDecoderLayer(self.config, name=str(i), dtype=self.dtype)
for i in range(self.config.num_hidden_layers)
]
self.layerdrop = self.config.layerdrop
def __call__(
self,
hidden_states,
attention_mask,
deterministic: bool = True,
init_cache: bool = False,
output_attentions: bool = False,
output_hidden_states: bool = False,
):
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
for decoder_layer in self.layers:
if output_hidden_states:
all_hidden_states += (hidden_states,)
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
init_cache=init_cache,
output_attentions=output_attentions,
deterministic=deterministic,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attns += (layer_outputs[1],)
outputs = [hidden_states, all_hidden_states, all_self_attns]
return outputs
class FlaxOPTLearnedPositionalEmbedding(nn.Embed):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def setup(self):
self.offset = 2
self.embedding = self.param(
"embedding", self.embedding_init, (self.num_embeddings + self.offset, self.features), self.param_dtype
)
def __call__(self, positions):
"""`input_ids_shape` is expected to be [bsz x seqlen]."""
return super().__call__(positions + self.offset)
class FlaxOPTDecoder(nn.Module):
config: OPTConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
offset: int = 2
def setup(self):
self.dropout_layer = nn.Dropout(rate=self.config.dropout)
embed_dim = self.config.hidden_size
self.padding_idx = self.config.pad_token_id
self.max_target_positions = self.config.max_position_embeddings
self.embed_tokens = nn.Embed(
self.config.vocab_size,
self.config.word_embed_proj_dim,
embedding_init=jax.nn.initializers.normal(self.config.init_std),
dtype=self.dtype,
)
self.embed_positions = FlaxOPTLearnedPositionalEmbedding(
self.config.max_position_embeddings,
embed_dim,
embedding_init=jax.nn.initializers.normal(self.config.init_std),
dtype=self.dtype,
)
if self.config.word_embed_proj_dim != self.config.hidden_size:
self.project_in = nn.Dense(self.config.hidden_size, use_bias=False)
self.project_out = nn.Dense(self.config.word_embed_proj_dim, use_bias=False)
else:
self.project_in = None
self.project_out = None
# Note that the only purpose of `config._remove_final_layer_norm` is to keep backward compatibility
# with checkpoints that have been fine-tuned before transformers v4.20.1
# see https://github.com/facebookresearch/metaseq/pull/164
if self.config.do_layer_norm_before and not self.config._remove_final_layer_norm:
self.final_layer_norm = nn.LayerNorm(dtype=self.dtype, epsilon=1e-05)
else:
self.final_layer_norm = None
self.layers = FlaxOPTDecoderLayerCollection(self.config, self.dtype)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
init_cache: bool = False,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
input_shape = input_ids.shape
input_ids = input_ids.reshape(-1, input_shape[-1])
inputs_embeds = self.embed_tokens(input_ids)
if self.project_in is not None:
inputs_embeds = self.project_in(inputs_embeds)
positions = self.embed_positions(position_ids)
hidden_states = inputs_embeds + positions
hidden_state, all_hidden_states, attentions = self.layers(
hidden_states,
attention_mask,
deterministic=deterministic,
init_cache=init_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
)
if self.final_layer_norm is not None:
hidden_state = self.final_layer_norm(hidden_state)
if self.project_out is not None:
hidden_state = self.project_out(hidden_state)
if output_hidden_states:
all_hidden_states += (hidden_state,)
outputs = [hidden_state, all_hidden_states, attentions]
if not return_dict:
return tuple(v for v in outputs if v is not None)
return FlaxBaseModelOutput(
last_hidden_state=hidden_state,
hidden_states=all_hidden_states,
attentions=attentions,
)
class FlaxOPTPreTrainedModel(FlaxPreTrainedModel):
config_class = OPTConfig
base_model_prefix: str = "model"
module_class: nn.Module = None
def __init__(
self,
config: OPTConfig,
input_shape: Tuple[int] = (1, 1),
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, **kwargs)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
input_ids = jnp.zeros(input_shape, dtype="i4")
attention_mask = jnp.ones_like(input_ids)
batch_size, sequence_length = input_ids.shape
position_ids = jnp.broadcast_to(jnp.arange(sequence_length)[None, :], (batch_size, sequence_length))
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
module_init_outputs = self.module.init(
rngs,
input_ids,
attention_mask,
position_ids,
return_dict=False,
)
random_params = module_init_outputs["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
def init_cache(self, batch_size, max_length):
r"""
Args:
batch_size (`int`):
batch_size used for fast auto-regressive decoding. Defines the batch size of the initialized cache.
max_length (`int`):
maximum possible length for auto-regressive decoding. Defines the sequence length of the initialized
cache.
"""
# init input variables to retrieve cache
input_ids = jnp.ones((batch_size, max_length), dtype="i4")
attention_mask = jnp.ones_like(input_ids, dtype="i4")
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
init_variables = self.module.init(
jax.random.PRNGKey(0), input_ids, attention_mask, position_ids, return_dict=False, init_cache=True
)
return unfreeze(init_variables["cache"])
def __call__(
self,
input_ids: jnp.ndarray,
attention_mask: Optional[jnp.ndarray] = None,
position_ids: Optional[jnp.ndarray] = None,
params: dict = None,
past_key_values: dict = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
dropout_rng: PRNGKey = None,
deterministic: bool = True,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if position_ids is None:
position_ids = (attention_mask.cumsum(axis=1) * attention_mask) - 1
# Handle any PRNG if needed
rngs = {"dropout": dropout_rng} if dropout_rng is not None else {}
inputs = {"params": params or self.params}
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be passed
# down to ensure cache is used. It has to be made sure that cache is marked as mutable so that it can be
# changed by FlaxOPTAttention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
outputs = self.module.apply(
inputs,
input_ids=jnp.array(input_ids, dtype="i4"),
attention_mask=jnp.array(attention_mask, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
rngs=rngs,
mutable=mutable,
)
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs, past_key_values = outputs
outputs["past_key_values"] = unfreeze(past_key_values["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs, past_key_values = outputs
outputs = outputs[:1] + (unfreeze(past_key_values["cache"]),) + outputs[1:]
return outputs
class FlaxOPTModule(nn.Module):
config: OPTConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.decoder = FlaxOPTDecoder(self.config, dtype=self.dtype)
def _get_decoder_module(self):
return self.decoder
def __call__(
self,
input_ids,
attention_mask,
position_ids,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
init_cache=False,
):
decoder_outputs = self.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
position_ids=position_ids,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
init_cache=init_cache,
)
if not return_dict:
return decoder_outputs
return FlaxBaseModelOutput(
last_hidden_state=decoder_outputs.last_hidden_state,
hidden_states=decoder_outputs.hidden_states,
attentions=decoder_outputs.attentions,
)
# Copied from transformers.models.bart.modeling_flax_bart.FlaxBartModel with Bart->OPT
class FlaxOPTModel(FlaxOPTPreTrainedModel):
config: OPTConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
module_class = FlaxOPTModule
append_call_sample_docstring(FlaxOPTModel, _CHECKPOINT_FOR_DOC, FlaxBaseModelOutput, _CONFIG_FOR_DOC)
@add_start_docstrings(
"The bare OPT Model transformer outputting raw hidden-states without any specific head on top.",
OPT_START_DOCSTRING,
)
class FlaxOPTForCausalLMModule(nn.Module):
config: OPTConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.model = FlaxOPTModule(config=self.config, dtype=self.dtype)
self.lm_head = nn.Dense(
self.config.vocab_size,
use_bias=False,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.init_std),
)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
init_cache: bool = False,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
deterministic: bool = True,
):
outputs = self.model(
input_ids,
attention_mask,
position_ids,
init_cache=init_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
deterministic=deterministic,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = self.model.variables["params"]["decoder"]["embed_tokens"]["embedding"]
lm_logits = self.lm_head.apply({"params": {"kernel": shared_embedding.T}}, hidden_states)
else:
lm_logits = self.lm_head(hidden_states)
if not return_dict:
return (lm_logits,) + outputs[1:]
return FlaxMaskedLMOutput(
logits=lm_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
OPT Model with a language modeling head on top (linear layer with weights tied to the input embeddings) e.g for
autoregressive tasks.
""",
OPT_START_DOCSTRING,
)
class FlaxOPTForCausalLM(FlaxOPTPreTrainedModel):
module_class = FlaxOPTForCausalLMModule
def prepare_inputs_for_generation(self, input_ids, max_length, attention_mask: Optional[jnp.DeviceArray] = None):
# initializing the cache
batch_size, seq_length = input_ids.shape
past_key_values = self.init_cache(batch_size, max_length)
# Note that usually one would have to put 0's in the attention_mask for x > input_ids.shape[-1] and x < cache_length.
# But since the decoder uses a causal mask, those positions are masked anyway.
# Thus, we can create a single static attention_mask here, which is more efficient for compilation
extended_attention_mask = jnp.ones((batch_size, max_length), dtype="i4")
if attention_mask is not None:
position_ids = attention_mask.cumsum(axis=1) - 1
extended_attention_mask = lax.dynamic_update_slice(extended_attention_mask, attention_mask, (0, 0))
else:
position_ids = jnp.broadcast_to(jnp.arange(seq_length, dtype="i4")[None, :], (batch_size, seq_length))
return {
"past_key_values": past_key_values,
"attention_mask": extended_attention_mask,
"position_ids": position_ids,
}
def update_inputs_for_generation(self, model_outputs, model_kwargs):
model_kwargs["past_key_values"] = model_outputs.past_key_values
model_kwargs["position_ids"] = model_kwargs["position_ids"][:, -1:] + 1
return model_kwargs
append_call_sample_docstring(
FlaxOPTForCausalLM,
_CHECKPOINT_FOR_DOC,
FlaxBaseModelOutput,
_CONFIG_FOR_DOC,
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 3,858 | src/transformers/models/opt/convert_opt_original_pytorch_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert OPT checkpoint."""
import argparse
from pathlib import Path
import torch
from transformers import OPTConfig, OPTModel
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
def load_checkpoint(checkpoint_path):
"""Checkpoint path should end in model.pt"""
sd = torch.load(checkpoint_path, map_location="cpu")
if "model" in sd.keys():
sd = torch.load(checkpoint_path, map_location="cpu")["model"]
# pop unnecessary weights
keys_to_delete = [
"decoder.version",
"decoder.output_projection.weight",
]
for key in keys_to_delete:
if key in sd:
sd.pop(key)
keys_to_rename = {
"decoder.project_in_dim.weight": "decoder.project_in.weight",
"decoder.project_out_dim.weight": "decoder.project_out.weight",
"decoder.layer_norm.weight": "decoder.final_layer_norm.weight",
"decoder.layer_norm.bias": "decoder.final_layer_norm.bias",
}
for old_key, new_key in keys_to_rename.items():
if old_key in sd:
sd[new_key] = sd.pop(old_key)
keys = list(sd.keys())
for key in keys:
if ".qkj_proj." in key:
value = sd[key]
# We split QKV in seperate Q,K,V
q_name = key.replace(".qkv_proj.", ".q_proj.")
k_name = key.replace(".qkv_proj.", ".k_proj.")
v_name = key.replace(".qkv_proj.", ".v_proj.")
depth = value.shape[0]
assert depth % 3 == 0
# `SequeuceParallelTransformerBlock` has QKV weight is separated in K,V,Q despite the naming:
# https://cs.github.com/facebookresearch/metaseq/blob/51871bd73cd04c038f239ea2a26db1d7f6b37927/metaseq/modules/sequence_parallel_transformer_layer.py#L97
k, v, q = torch.split(value, depth // 3, dim=0)
sd[q_name] = q
sd[k_name] = k
sd[v_name] = v
del sd[key]
return sd
@torch.no_grad()
def convert_opt_checkpoint(checkpoint_path, pytorch_dump_folder_path, config=None):
"""
Copy/paste/tweak model's weights to our BERT structure.
"""
state_dict = load_checkpoint(checkpoint_path)
if config is not None:
config = OPTConfig.from_pretrained(config)
else:
config = OPTConfig()
model = OPTModel(config).half().eval()
model.load_state_dict(state_dict)
# Check results
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
model.save_pretrained(pytorch_dump_folder_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--fairseq_path",
type=str,
help=(
"path to fairseq checkpoint in correct format. You can find all checkpoints in the correct format here:"
" https://huggingface.co/models?other=opt_metasq"
),
)
parser.add_argument("--pytorch_dump_folder_path", default=None, type=str, help="Path to the output PyTorch model.")
parser.add_argument("--hf_config", default=None, type=str, help="Define HF config.")
args = parser.parse_args()
convert_opt_checkpoint(args.fairseq_path, args.pytorch_dump_folder_path, config=args.hf_config)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 57,073 | src/transformers/models/opt/modeling_opt.py | # coding=utf-8
# Copyright 2022 The Fairseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch OPT model."""
import random
from typing import List, Optional, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutputWithPast,
CausalLMOutputWithPast,
QuestionAnsweringModelOutput,
SequenceClassifierOutputWithPast,
)
from ...modeling_utils import PreTrainedModel
from ...utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_opt import OPTConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "facebook/opt-350m"
_CONFIG_FOR_DOC = "OPTConfig"
# Base model docstring
_EXPECTED_OUTPUT_SHAPE = [1, 8, 1024]
# SequenceClassification docstring
_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION = "ArthurZ/opt-350m-dummy-sc"
_SEQ_CLASS_EXPECTED_LOSS = 1.71
_SEQ_CLASS_EXPECTED_OUTPUT = "'LABEL_0'"
OPT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"facebook/opt-125m",
"facebook/opt-350m",
"facebook/opt-1.3b",
"facebook/opt-2.7b",
"facebook/opt-6.7b",
"facebook/opt-13b",
"facebook/opt-30b",
# See all OPT models at https://huggingface.co/models?filter=opt
]
def _make_causal_mask(input_ids_shape: torch.Size, dtype: torch.dtype, past_key_values_length: int = 0):
"""
Make causal mask used for bi-directional self-attention.
"""
bsz, tgt_len = input_ids_shape
mask = torch.full((tgt_len, tgt_len), torch.tensor(torch.finfo(dtype).min))
mask_cond = torch.arange(mask.size(-1))
mask.masked_fill_(mask_cond < (mask_cond + 1).view(mask.size(-1), 1), 0)
mask = mask.to(dtype)
if past_key_values_length > 0:
mask = torch.cat([torch.zeros(tgt_len, past_key_values_length, dtype=dtype), mask], dim=-1)
return mask[None, None, :, :].expand(bsz, 1, tgt_len, tgt_len + past_key_values_length)
def _expand_mask(mask: torch.Tensor, dtype: torch.dtype, tgt_len: Optional[int] = None):
"""
Expands attention_mask from `[bsz, seq_len]` to `[bsz, 1, tgt_seq_len, src_seq_len]`.
"""
bsz, src_len = mask.size()
tgt_len = tgt_len if tgt_len is not None else src_len
expanded_mask = mask[:, None, None, :].expand(bsz, 1, tgt_len, src_len).to(dtype)
inverted_mask = 1.0 - expanded_mask
return inverted_mask.masked_fill(inverted_mask.to(torch.bool), torch.finfo(dtype).min)
class OPTLearnedPositionalEmbedding(nn.Embedding):
"""
This module learns positional embeddings up to a fixed maximum size.
"""
def __init__(self, num_embeddings: int, embedding_dim: int):
# OPT is set up so that if padding_idx is specified then offset the embedding ids by 2
# and adjust num_embeddings appropriately. Other models don't have this hack
self.offset = 2
super().__init__(num_embeddings + self.offset, embedding_dim)
def forward(self, attention_mask: torch.LongTensor, past_key_values_length: int = 0):
"""`input_ids_shape` is expected to be [bsz x seqlen]."""
attention_mask = attention_mask.long()
# create positions depending on attention_mask
positions = (torch.cumsum(attention_mask, dim=1).type_as(attention_mask) * attention_mask).long() - 1
# cut positions if `past_key_values_length` is > 0
positions = positions[:, past_key_values_length:]
return super().forward(positions + self.offset)
class OPTAttention(nn.Module):
"""Multi-headed attention from 'Attention Is All You Need' paper"""
def __init__(
self,
embed_dim: int,
num_heads: int,
dropout: float = 0.0,
is_decoder: bool = False,
bias: bool = True,
):
super().__init__()
self.embed_dim = embed_dim
self.num_heads = num_heads
self.dropout = dropout
self.head_dim = embed_dim // num_heads
if (self.head_dim * num_heads) != self.embed_dim:
raise ValueError(
f"embed_dim must be divisible by num_heads (got `embed_dim`: {self.embed_dim}"
f" and `num_heads`: {num_heads})."
)
self.scaling = self.head_dim**-0.5
self.is_decoder = is_decoder
self.k_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.v_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.q_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
self.out_proj = nn.Linear(embed_dim, embed_dim, bias=bias)
def _shape(self, tensor: torch.Tensor, seq_len: int, bsz: int):
return tensor.view(bsz, seq_len, self.num_heads, self.head_dim).transpose(1, 2).contiguous()
def forward(
self,
hidden_states: torch.Tensor,
key_value_states: Optional[torch.Tensor] = None,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Tuple[torch.Tensor, Optional[torch.Tensor], Optional[Tuple[torch.Tensor]]]:
"""Input shape: Batch x Time x Channel"""
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
bsz, tgt_len, _ = hidden_states.size()
# get query proj
query_states = self.q_proj(hidden_states) * self.scaling
# get key, value proj
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_states = past_key_value[0]
value_states = past_key_value[1]
elif is_cross_attention:
# cross_attentions
key_states = self._shape(self.k_proj(key_value_states), -1, bsz)
value_states = self._shape(self.v_proj(key_value_states), -1, bsz)
elif past_key_value is not None:
# reuse k, v, self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
key_states = torch.cat([past_key_value[0], key_states], dim=2)
value_states = torch.cat([past_key_value[1], value_states], dim=2)
else:
# self_attention
key_states = self._shape(self.k_proj(hidden_states), -1, bsz)
value_states = self._shape(self.v_proj(hidden_states), -1, bsz)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_states, value_states)
proj_shape = (bsz * self.num_heads, -1, self.head_dim)
query_states = self._shape(query_states, tgt_len, bsz).view(*proj_shape)
key_states = key_states.view(*proj_shape)
value_states = value_states.view(*proj_shape)
src_len = key_states.size(1)
attn_weights = torch.bmm(query_states, key_states.transpose(1, 2))
if attn_weights.size() != (bsz * self.num_heads, tgt_len, src_len):
raise ValueError(
f"Attention weights should be of size {(bsz * self.num_heads, tgt_len, src_len)}, but is"
f" {attn_weights.size()}"
)
if attention_mask is not None:
if attention_mask.size() != (bsz, 1, tgt_len, src_len):
raise ValueError(
f"Attention mask should be of size {(bsz, 1, tgt_len, src_len)}, but is {attention_mask.size()}"
)
attn_weights = attn_weights.view(bsz, self.num_heads, tgt_len, src_len) + attention_mask
attn_weights = torch.max(attn_weights, torch.tensor(torch.finfo(attn_weights.dtype).min))
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
# upcast to fp32 if the weights are in fp16. Please see https://github.com/huggingface/transformers/pull/17437
if attn_weights.dtype == torch.float16:
attn_weights = nn.functional.softmax(attn_weights, dim=-1, dtype=torch.float32).to(torch.float16)
else:
attn_weights = nn.functional.softmax(attn_weights, dim=-1)
if layer_head_mask is not None:
if layer_head_mask.size() != (self.num_heads,):
raise ValueError(
f"Head mask for a single layer should be of size {(self.num_heads,)}, but is"
f" {layer_head_mask.size()}"
)
attn_weights = layer_head_mask.view(1, -1, 1, 1) * attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights.view(bsz * self.num_heads, tgt_len, src_len)
if output_attentions:
# this operation is a bit awkward, but it's required to
# make sure that attn_weights keeps its gradient.
# In order to do so, attn_weights have to be reshaped
# twice and have to be reused in the following
attn_weights_reshaped = attn_weights.view(bsz, self.num_heads, tgt_len, src_len)
attn_weights = attn_weights_reshaped.view(bsz * self.num_heads, tgt_len, src_len)
else:
attn_weights_reshaped = None
attn_probs = nn.functional.dropout(attn_weights, p=self.dropout, training=self.training)
attn_output = torch.bmm(attn_probs, value_states)
if attn_output.size() != (bsz * self.num_heads, tgt_len, self.head_dim):
raise ValueError(
f"`attn_output` should be of size {(bsz, self.num_heads, tgt_len, self.head_dim)}, but is"
f" {attn_output.size()}"
)
attn_output = attn_output.view(bsz, self.num_heads, tgt_len, self.head_dim)
attn_output = attn_output.transpose(1, 2)
# Use the `embed_dim` from the config (stored in the class) rather than `hidden_state` because `attn_output` can be
# partitioned aross GPUs when using tensor-parallelism.
attn_output = attn_output.reshape(bsz, tgt_len, self.embed_dim)
attn_output = self.out_proj(attn_output)
return attn_output, attn_weights_reshaped, past_key_value
class OPTDecoderLayer(nn.Module):
def __init__(self, config: OPTConfig):
super().__init__()
self.embed_dim = config.hidden_size
self.self_attn = OPTAttention(
embed_dim=self.embed_dim,
num_heads=config.num_attention_heads,
dropout=config.attention_dropout,
is_decoder=True,
bias=config.enable_bias,
)
self.do_layer_norm_before = config.do_layer_norm_before
self.dropout = config.dropout
self.activation_fn = ACT2FN[config.activation_function]
self.self_attn_layer_norm = nn.LayerNorm(
self.embed_dim, elementwise_affine=config.layer_norm_elementwise_affine
)
self.fc1 = nn.Linear(self.embed_dim, config.ffn_dim, bias=config.enable_bias)
self.fc2 = nn.Linear(config.ffn_dim, self.embed_dim, bias=config.enable_bias)
self.final_layer_norm = nn.LayerNorm(self.embed_dim, elementwise_affine=config.layer_norm_elementwise_affine)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.Tensor] = None,
layer_head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = False,
use_cache: Optional[bool] = False,
past_key_value: Optional[Tuple[torch.Tensor]] = None,
) -> Tuple[torch.FloatTensor, Optional[Tuple[torch.FloatTensor, torch.FloatTensor]]]:
"""
Args:
hidden_states (`torch.FloatTensor`): input to the layer of shape `(batch, seq_len, embed_dim)`
attention_mask (`torch.FloatTensor`, *optional*): attention mask of size
`(batch, 1, tgt_len, src_len)` where padding elements are indicated by very large negative values.
layer_head_mask (`torch.FloatTensor`, *optional*): mask for attention heads in a given layer of size
`(encoder_attention_heads,)`.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
past_key_value (`Tuple(torch.FloatTensor)`, *optional*): cached past key and value projection states
"""
residual = hidden_states
# 125m, 1.7B, ..., 175B applies layer norm BEFORE attention
if self.do_layer_norm_before:
hidden_states = self.self_attn_layer_norm(hidden_states)
# Self Attention
hidden_states, self_attn_weights, present_key_value = self.self_attn(
hidden_states=hidden_states,
past_key_value=past_key_value,
attention_mask=attention_mask,
layer_head_mask=layer_head_mask,
output_attentions=output_attentions,
)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = residual + hidden_states
# 350m applies layer norm AFTER attention
if not self.do_layer_norm_before:
hidden_states = self.self_attn_layer_norm(hidden_states)
# Fully Connected
hidden_states_shape = hidden_states.shape
hidden_states = hidden_states.reshape(-1, hidden_states.size(-1))
residual = hidden_states
# 125m, 1.7B, ..., 175B applies layer norm BEFORE attention
if self.do_layer_norm_before:
hidden_states = self.final_layer_norm(hidden_states)
hidden_states = self.fc1(hidden_states)
hidden_states = self.activation_fn(hidden_states)
hidden_states = self.fc2(hidden_states)
hidden_states = nn.functional.dropout(hidden_states, p=self.dropout, training=self.training)
hidden_states = (residual + hidden_states).view(hidden_states_shape)
# 350m applies layer norm AFTER attention
if not self.do_layer_norm_before:
hidden_states = self.final_layer_norm(hidden_states)
outputs = (hidden_states,)
if output_attentions:
outputs += (self_attn_weights,)
if use_cache:
outputs += (present_key_value,)
return outputs
OPT_START_DOCSTRING = r"""
This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
etc.)
This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
and behavior.
Parameters:
config ([`OPTConfig`]):
Model configuration class with all the parameters of the model. Initializing with a config file does not
load the weights associated with the model, only the configuration. Check out the
[`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
@add_start_docstrings(
"The bare OPT Model outputting raw hidden-states without any specific head on top.",
OPT_START_DOCSTRING,
)
class OPTPreTrainedModel(PreTrainedModel):
config_class = OPTConfig
base_model_prefix = "model"
supports_gradient_checkpointing = True
_no_split_modules = ["OPTDecoderLayer"]
_keys_to_ignore_on_load_unexpected = [r"decoder\.version"]
def _init_weights(self, module):
std = self.config.init_std
if isinstance(module, nn.Linear):
module.weight.data.normal_(mean=0.0, std=std)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=std)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, (OPTDecoder)):
module.gradient_checkpointing = value
OPT_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you provide
it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
If `past_key_values` is used, optionally only the last `decoder_input_ids` have to be input (see
`past_key_values`).
If you want to change padding behavior, you should read [`modeling_opt._prepare_decoder_attention_mask`]
and modify to your needs. See diagram 1 in [the paper](https://arxiv.org/abs/1910.13461) for more
information on the default strategy.
head_mask (`torch.Tensor` of shape `(encoder_layers, encoder_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules in the encoder. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of shape
`(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of shape
`(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the cross-attention
blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert `input_ids` indices into associated vectors than the
model's internal embedding lookup matrix.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class OPTDecoder(OPTPreTrainedModel):
"""
Transformer decoder consisting of *config.num_hidden_layers* layers. Each layer is a [`OPTDecoderLayer`]
Args:
config: OPTConfig
"""
def __init__(self, config: OPTConfig):
super().__init__(config)
self.dropout = config.dropout
self.layerdrop = config.layerdrop
self.padding_idx = config.pad_token_id
self.max_target_positions = config.max_position_embeddings
self.vocab_size = config.vocab_size
self.embed_tokens = nn.Embedding(config.vocab_size, config.word_embed_proj_dim, self.padding_idx)
self.embed_positions = OPTLearnedPositionalEmbedding(config.max_position_embeddings, config.hidden_size)
if config.word_embed_proj_dim != config.hidden_size:
self.project_out = nn.Linear(config.hidden_size, config.word_embed_proj_dim, bias=False)
else:
self.project_out = None
if config.word_embed_proj_dim != config.hidden_size:
self.project_in = nn.Linear(config.word_embed_proj_dim, config.hidden_size, bias=False)
else:
self.project_in = None
# Note that the only purpose of `config._remove_final_layer_norm` is to keep backward compatibility
# with checkpoints that have been fine-tuned before transformers v4.20.1
# see https://github.com/facebookresearch/metaseq/pull/164
if config.do_layer_norm_before and not config._remove_final_layer_norm:
self.final_layer_norm = nn.LayerNorm(
config.hidden_size, elementwise_affine=config.layer_norm_elementwise_affine
)
else:
self.final_layer_norm = None
self.layers = nn.ModuleList([OPTDecoderLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embed_tokens
def set_input_embeddings(self, value):
self.embed_tokens = value
# Copied from transformers.models.bart.modeling_bart.BartDecoder._prepare_decoder_attention_mask
def _prepare_decoder_attention_mask(self, attention_mask, input_shape, inputs_embeds, past_key_values_length):
# create causal mask
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
combined_attention_mask = None
if input_shape[-1] > 1:
combined_attention_mask = _make_causal_mask(
input_shape, inputs_embeds.dtype, past_key_values_length=past_key_values_length
).to(inputs_embeds.device)
if attention_mask is not None:
# [bsz, seq_len] -> [bsz, 1, tgt_seq_len, src_seq_len]
expanded_attn_mask = _expand_mask(attention_mask, inputs_embeds.dtype, tgt_len=input_shape[-1]).to(
inputs_embeds.device
)
combined_attention_mask = (
expanded_attn_mask if combined_attention_mask is None else expanded_attn_mask + combined_attention_mask
)
return combined_attention_mask
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPast]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(num_hidden_layers, num_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# retrieve input_ids and inputs_embeds
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both decoder_input_ids and decoder_inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
input_ids = input_ids.view(-1, input_shape[-1])
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either decoder_input_ids or decoder_inputs_embeds")
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if inputs_embeds is None:
inputs_embeds = self.embed_tokens(input_ids)
# embed positions
if attention_mask is None:
attention_mask = torch.ones(inputs_embeds.shape[:2], dtype=torch.bool, device=inputs_embeds.device)
pos_embeds = self.embed_positions(attention_mask, past_key_values_length)
attention_mask = self._prepare_decoder_attention_mask(
attention_mask, input_shape, inputs_embeds, past_key_values_length
)
if self.project_in is not None:
inputs_embeds = self.project_in(inputs_embeds)
hidden_states = inputs_embeds + pos_embeds
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
# decoder layers
all_hidden_states = () if output_hidden_states else None
all_self_attns = () if output_attentions else None
next_decoder_cache = () if use_cache else None
# check if head_mask has a correct number of layers specified if desired
for attn_mask, mask_name in zip([head_mask], ["head_mask"]):
if attn_mask is not None:
if attn_mask.size()[0] != (len(self.layers)):
raise ValueError(
f"The `{mask_name}` should be specified for {len(self.layers)} layers, but it is for"
f" {head_mask.size()[0]}."
)
for idx, decoder_layer in enumerate(self.layers):
# add LayerDrop (see https://arxiv.org/abs/1909.11556 for description)
if output_hidden_states:
all_hidden_states += (hidden_states,)
dropout_probability = random.uniform(0, 1)
if self.training and (dropout_probability < self.layerdrop):
continue
past_key_value = past_key_values[idx] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
# None for past_key_value
return module(*inputs, output_attentions, None)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(decoder_layer),
hidden_states,
attention_mask,
head_mask[idx] if head_mask is not None else None,
None,
)
else:
layer_outputs = decoder_layer(
hidden_states,
attention_mask=attention_mask,
layer_head_mask=(head_mask[idx] if head_mask is not None else None),
past_key_value=past_key_value,
output_attentions=output_attentions,
use_cache=use_cache,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[2 if output_attentions else 1],)
if output_attentions:
all_self_attns += (layer_outputs[1],)
if self.final_layer_norm is not None:
hidden_states = self.final_layer_norm(hidden_states)
if self.project_out is not None:
hidden_states = self.project_out(hidden_states)
# add hidden states from the last decoder layer
if output_hidden_states:
all_hidden_states += (hidden_states,)
next_cache = next_decoder_cache if use_cache else None
if not return_dict:
return tuple(v for v in [hidden_states, next_cache, all_hidden_states, all_self_attns] if v is not None)
return BaseModelOutputWithPast(
last_hidden_state=hidden_states,
past_key_values=next_cache,
hidden_states=all_hidden_states,
attentions=all_self_attns,
)
@add_start_docstrings(
"The bare OPT Model outputting raw hidden-states without any specific head on top.",
OPT_START_DOCSTRING,
)
class OPTModel(OPTPreTrainedModel):
def __init__(self, config: OPTConfig):
super().__init__(config)
self.decoder = OPTDecoder(config)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.decoder.embed_tokens
def set_input_embeddings(self, value):
self.decoder.embed_tokens = value
def get_decoder(self):
return self.decoder
@add_start_docstrings_to_model_forward(OPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPast,
config_class=_CONFIG_FOR_DOC,
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPast]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
use_cache = use_cache if use_cache is not None else self.config.use_cache
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# decoder outputs consists of (dec_features, past_key_value, dec_hidden, dec_attn)
decoder_outputs = self.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if not return_dict:
return decoder_outputs
return BaseModelOutputWithPast(
last_hidden_state=decoder_outputs.last_hidden_state,
past_key_values=decoder_outputs.past_key_values,
hidden_states=decoder_outputs.hidden_states,
attentions=decoder_outputs.attentions,
)
class OPTForCausalLM(OPTPreTrainedModel):
_keys_to_ignore_on_load_missing = [r"lm_head.weight"]
def __init__(self, config):
super().__init__(config)
self.model = OPTModel(config)
# the lm_head weight is automatically tied to the embed tokens weight
self.lm_head = nn.Linear(config.word_embed_proj_dim, config.vocab_size, bias=False)
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.model.decoder.embed_tokens
def set_input_embeddings(self, value):
self.model.decoder.embed_tokens = value
def get_output_embeddings(self):
return self.lm_head
def set_output_embeddings(self, new_embeddings):
self.lm_head = new_embeddings
def set_decoder(self, decoder):
self.model.decoder = decoder
def get_decoder(self):
return self.model.decoder
@replace_return_docstrings(output_type=CausalLMOutputWithPast, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
past_key_values: Optional[List[torch.FloatTensor]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, CausalLMOutputWithPast]:
r"""
Args:
input_ids (`torch.LongTensor` of shape `(batch_size, sequence_length)`):
Indices of input sequence tokens in the vocabulary. Padding will be ignored by default should you
provide it.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.Tensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
head_mask (`torch.Tensor` of shape `(num_hidden_layers, num_attention_heads)`, *optional*):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))`, *optional*, returned when `use_cache=True` is passed or when `config.use_cache=True`):
Tuple of `tuple(torch.FloatTensor)` of length `config.n_layers`, with each tuple having 2 tensors of
shape `(batch_size, num_heads, sequence_length, embed_size_per_head)`) and 2 additional tensors of
shape `(batch_size, num_heads, encoder_sequence_length, embed_size_per_head)`. The two additional
tensors are only required when the model is used as a decoder in a Sequence to Sequence model.
Contains pre-computed hidden-states (key and values in the self-attention blocks and in the
cross-attention blocks) that can be used (see `past_key_values` input) to speed up sequential decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those
that don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of
all `decoder_input_ids` of shape `(batch_size, sequence_length)`.
inputs_embeds (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation.
This is useful if you want more control over how to convert `input_ids` indices into associated vectors
than the model's internal embedding lookup matrix.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should either be in `[0, ...,
config.vocab_size]` or -100 (see `input_ids` docstring). Tokens with indices set to `-100` are ignored
(masked), the loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding
(see `past_key_values`).
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under
returned tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors
for more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, OPTForCausalLM
>>> model = OPTForCausalLM.from_pretrained("facebook/opt-350m")
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/opt-350m")
>>> prompt = "Hey, are you consciours? Can you talk to me?"
>>> inputs = tokenizer(prompt, return_tensors="pt")
>>> # Generate
>>> generate_ids = model.generate(inputs.input_ids, max_length=30)
>>> tokenizer.batch_decode(generate_ids, skip_special_tokens=True, clean_up_tokenization_spaces=False)[0]
"Hey, are you consciours? Can you talk to me?\nI'm not consciours, but I can talk to you."
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# decoder outputs consists of (dec_features, layer_state, dec_hidden, dec_attn)
outputs = self.model.decoder(
input_ids=input_ids,
attention_mask=attention_mask,
head_mask=head_mask,
past_key_values=past_key_values,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
logits = self.lm_head(outputs[0]).contiguous()
loss = None
if labels is not None:
# Shift so that tokens < n predict n
shift_logits = logits[..., :-1, :].contiguous()
shift_labels = labels[..., 1:].contiguous()
# Flatten the tokens
loss_fct = CrossEntropyLoss()
loss = loss_fct(shift_logits.view(-1, self.config.vocab_size), shift_labels.view(-1))
if not return_dict:
output = (logits,) + outputs[1:]
return (loss,) + output if loss is not None else output
return CausalLMOutputWithPast(
loss=loss,
logits=logits,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def prepare_inputs_for_generation(
self, input_ids, past_key_values=None, attention_mask=None, inputs_embeds=None, **kwargs
):
if past_key_values:
input_ids = input_ids[:, -1:]
# if `inputs_embeds` are passed, we only want to use them in the 1st generation step
if inputs_embeds is not None and past_key_values is None:
model_inputs = {"inputs_embeds": inputs_embeds}
else:
model_inputs = {"input_ids": input_ids}
model_inputs.update(
{
"past_key_values": past_key_values,
"use_cache": kwargs.get("use_cache"),
"attention_mask": attention_mask,
}
)
return model_inputs
@staticmethod
def _reorder_cache(past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
return reordered_past
@add_start_docstrings(
"""
The OPT Model transformer with a sequence classification head on top (linear layer).
[`OPTForSequenceClassification`] uses the last token in order to do the classification, as other causal models
(e.g. GPT-2) do.
Since it does classification on the last token, it requires to know the position of the last token. If a
`pad_token_id` is defined in the configuration, it finds the last token that is not a padding token in each row. If
no `pad_token_id` is defined, it simply takes the last value in each row of the batch. Since it cannot guess the
padding tokens when `inputs_embeds` are passed instead of `input_ids`, it does the same (take the last value in
each row of the batch).
""",
OPT_START_DOCSTRING,
)
class OPTForSequenceClassification(OPTPreTrainedModel):
_keys_to_ignore_on_load_missing = [r"lm_head.weight"]
def __init__(self, config: OPTConfig):
super().__init__(config)
self.num_labels = config.num_labels
self.model = OPTModel(config)
self.score = nn.Linear(config.word_embed_proj_dim, self.num_labels, bias=False)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(OPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_SEQUENCE_CLASSIFICATION,
output_type=SequenceClassifierOutputWithPast,
config_class=_CONFIG_FOR_DOC,
expected_output=_SEQ_CLASS_EXPECTED_OUTPUT,
expected_loss=_SEQ_CLASS_EXPECTED_LOSS,
)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, SequenceClassifierOutputWithPast]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.model(
input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
logits = self.score(hidden_states)
if input_ids is not None:
batch_size, sequence_length = input_ids.shape[:2]
else:
batch_size, sequence_length = inputs_embeds.shape[:2]
if self.config.pad_token_id is None:
sequence_lengths = -1
else:
if input_ids is not None:
sequence_lengths = (torch.ne(input_ids, self.config.pad_token_id).sum(-1) - 1).to(logits.device)
else:
sequence_lengths = -1
logger.warning(
f"{self.__class__.__name__} will not detect padding tokens in `inputs_embeds`. Results may be "
"unexpected if using padding tokens in conjunction with `inputs_embeds.`"
)
pooled_logits = logits[torch.arange(batch_size, device=logits.device), sequence_lengths]
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(pooled_logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(pooled_logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(pooled_logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(pooled_logits, labels)
if not return_dict:
output = (pooled_logits,) + transformer_outputs[1:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutputWithPast(
loss=loss,
logits=pooled_logits,
past_key_values=transformer_outputs.past_key_values,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
def get_input_embeddings(self):
return self.model.decoder.embed_tokens
def set_input_embeddings(self, value):
self.model.decoder.embed_tokens = value
@add_start_docstrings(
"""
The OPT Model transformer with a span classification head on top for extractive question-answering tasks like SQuAD
(a linear layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
OPT_START_DOCSTRING,
)
class OPTForQuestionAnswering(OPTPreTrainedModel):
_keys_to_ignore_on_load_missing = [r"lm_head.weight"]
def __init__(self, config: OPTConfig):
super().__init__(config)
self.model = OPTModel(config)
self.qa_outputs = nn.Linear(config.word_embed_proj_dim, 2)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(OPT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=QuestionAnsweringModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.Tensor]]] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, QuestionAnsweringModelOutput]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, OPTForQuestionAnswering
>>> import torch
>>> torch.manual_seed(4) # doctest: +IGNORE_RESULT
>>> tokenizer = AutoTokenizer.from_pretrained("facebook/opt-350m")
>>> # note: we are loading a OPTForQuestionAnswering from the hub here,
>>> # so the head will be randomly initialized, hence the predictions will be random
>>> model = OPTForQuestionAnswering.from_pretrained("facebook/opt-350m")
>>> question, text = "Who was Jim Henson?", "Jim Henson was a nice puppet"
>>> inputs = tokenizer(question, text, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> answer_start_index = outputs.start_logits.argmax()
>>> answer_end_index = outputs.end_logits.argmax()
>>> predict_answer_tokens = inputs.input_ids[0, answer_start_index : answer_end_index + 1]
>>> predicted = tokenizer.decode(predict_answer_tokens)
>>> predicted
' Henson?'
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
transformer_outputs = self.model(
input_ids,
past_key_values=past_key_values,
attention_mask=attention_mask,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = transformer_outputs[0]
logits = self.qa_outputs(hidden_states)
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + transformer_outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return QuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
hidden_states=transformer_outputs.hidden_states,
attentions=transformer_outputs.attentions,
)
def get_input_embeddings(self):
return self.model.decoder.embed_tokens
def set_input_embeddings(self, value):
self.model.decoder.embed_tokens = value
|
27182812/ChatGLM-LLaMA-chinese-insturct | 7,245 | src/transformers/models/opt/configuration_opt.py | # coding=utf-8
# Copyright 2022 The Metaseq Authors and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" OPT model configuration"""
from ...configuration_utils import PretrainedConfig
from ...utils import logging
logger = logging.get_logger(__name__)
OPT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"facebook/opt-125m": "https://huggingface.co/facebook/opt-125m/blob/main/config.json",
"facebook/opt-350m": "https://huggingface.co/facebook/opt-350m/blob/main/config.json",
"facebook/opt-1.3b": "https://huggingface.co/facebook/opt-1.3b/blob/main/config.json",
"facebook/opt-2.7b": "https://huggingface.co/facebook/opt-2.7b/blob/main/config.json",
"facebook/opt-6.7b": "https://huggingface.co/facebook/opt-6.7b/blob/main/config.json",
"facebook/opt-13b": "https://huggingface.co/facebook/opt-13b/blob/main/config.json",
}
class OPTConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`OPTModel`]. It is used to instantiate a OPT model
according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the OPT
[facebook/opt-350m](https://huggingface.co/facebook/opt-350m) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 50272):
Vocabulary size of the OPT model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`OPTModel`]
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of decoder layers.
ffn_dim (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (often named feed-forward) layer in decoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer decoder.
activation_function (`str` or `function`, *optional*, defaults to `"relu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
max_position_embeddings (`int`, *optional*, defaults to 2048):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
do_layer_norm_before (`bool`, *optional*, defaults to `True`):
Whether to perform layer normalization before the attention block.
word_embed_proj_dim (`int`, *optional*):
`word_embed_proj_dim` can be set to down-project word embeddings, *e.g.* `opt-350m`. Defaults to
`hidden_size`.
dropout (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_dropout (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
layerdrop: (`float`, *optional*, defaults to 0.0):
The LayerDrop probability. See the [LayerDrop paper](see https://arxiv.org/abs/1909.11556) for more
details.
init_std (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models).
enable_bias (`bool`, *optional*, defaults to `True`):
Whether or not if the linear layers in the attention blocks should use the bias term.
layer_norm_elementwise_affine (`bool`, *optional*, defaults to `True`):
Whether or not if the layer norms should have learnable parameters.
Example:
```python
>>> from transformers import OPTConfig, OPTModel
>>> # Initializing a OPT facebook/opt-large style configuration
>>> configuration = OPTConfig()
>>> # Initializing a model (with random weights) from the facebook/opt-large style configuration
>>> model = OPTModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "opt"
keys_to_ignore_at_inference = ["past_key_values"]
def __init__(
self,
vocab_size=50272,
hidden_size=768,
num_hidden_layers=12,
ffn_dim=3072,
max_position_embeddings=2048,
do_layer_norm_before=True,
_remove_final_layer_norm=False,
word_embed_proj_dim=None,
dropout=0.1,
attention_dropout=0.0,
num_attention_heads=12,
activation_function="relu",
layerdrop=0.0,
init_std=0.02,
use_cache=True,
pad_token_id=1,
bos_token_id=2,
eos_token_id=2,
enable_bias=True,
layer_norm_elementwise_affine=True,
**kwargs,
):
super().__init__(
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
**kwargs,
)
self.vocab_size = vocab_size
self.max_position_embeddings = max_position_embeddings
self.num_attention_heads = num_attention_heads
self.word_embed_proj_dim = word_embed_proj_dim if word_embed_proj_dim is not None else hidden_size
self.ffn_dim = ffn_dim
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.dropout = dropout
self.attention_dropout = attention_dropout
self.activation_function = activation_function
self.init_std = init_std
self.layerdrop = layerdrop
self.use_cache = use_cache
self.do_layer_norm_before = do_layer_norm_before
# We keep these variables at `True` for backward compatibility.
self.enable_bias = enable_bias
self.layer_norm_elementwise_affine = layer_norm_elementwise_affine
# Note that the only purpose of `_remove_final_layer_norm` is to keep backward compatibility
# with checkpoints that have been fine-tuned before transformers v4.20.1
# see https://github.com/facebookresearch/metaseq/pull/164
self._remove_final_layer_norm = _remove_final_layer_norm
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,444 | src/transformers/models/dpt/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...file_utils import _LazyModule, is_tokenizers_available, is_torch_available, is_vision_available
from ...utils import OptionalDependencyNotAvailable
_import_structure = {"configuration_dpt": ["DPT_PRETRAINED_CONFIG_ARCHIVE_MAP", "DPTConfig"]}
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["feature_extraction_dpt"] = ["DPTFeatureExtractor"]
_import_structure["image_processing_dpt"] = ["DPTImageProcessor"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_dpt"] = [
"DPT_PRETRAINED_MODEL_ARCHIVE_LIST",
"DPTForDepthEstimation",
"DPTForSemanticSegmentation",
"DPTModel",
"DPTPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_dpt import DPT_PRETRAINED_CONFIG_ARCHIVE_MAP, DPTConfig
try:
if not is_vision_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .feature_extraction_dpt import DPTFeatureExtractor
from .image_processing_dpt import DPTImageProcessor
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_dpt import (
DPT_PRETRAINED_MODEL_ARCHIVE_LIST,
DPTForDepthEstimation,
DPTForSemanticSegmentation,
DPTModel,
DPTPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 54,912 | src/transformers/models/dpt/modeling_dpt.py | # coding=utf-8
# Copyright 2022 Intel Labs, OpenMMLab and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch DPT (Dense Prediction Transformers) model.
This implementation is heavily inspired by OpenMMLab's implementation, found here:
https://github.com/open-mmlab/mmsegmentation/blob/master/mmseg/models/decode_heads/dpt_head.py.
"""
import collections.abc
import math
from dataclasses import dataclass
from typing import List, Optional, Set, Tuple, Union
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import CrossEntropyLoss
from ...activations import ACT2FN
from ...file_utils import (
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
replace_return_docstrings,
)
from ...modeling_outputs import BaseModelOutput, DepthEstimatorOutput, SemanticSegmenterOutput
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import find_pruneable_heads_and_indices, prune_linear_layer
from ...utils import ModelOutput, logging
from ..auto import AutoBackbone
from .configuration_dpt import DPTConfig
logger = logging.get_logger(__name__)
# General docstring
_CONFIG_FOR_DOC = "DPTConfig"
# Base docstring
_CHECKPOINT_FOR_DOC = "Intel/dpt-large"
_EXPECTED_OUTPUT_SHAPE = [1, 577, 1024]
DPT_PRETRAINED_MODEL_ARCHIVE_LIST = [
"Intel/dpt-large",
"Intel/dpt-hybrid-midas",
# See all DPT models at https://huggingface.co/models?filter=dpt
]
@dataclass
class BaseModelOutputWithIntermediateActivations(ModelOutput):
"""
Base class for model's outputs that also contains intermediate activations that can be used at later stages. Useful
in the context of Vision models.:
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
intermediate_activations (`tuple(torch.FloatTensor)`, *optional*):
Intermediate activations that can be used to compute hidden states of the model at various layers.
"""
last_hidden_states: torch.FloatTensor = None
intermediate_activations: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BaseModelOutputWithPoolingAndIntermediateActivations(ModelOutput):
"""
Base class for model's outputs that also contains a pooling of the last hidden states as well as intermediate
activations that can be used by the model at later stages.
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Last layer hidden-state of the first token of the sequence (classification token) after further processing
through the layers used for the auxiliary pretraining task. E.g. for BERT-family of models, this returns
the classification token after processing through a linear layer and a tanh activation function. The linear
layer weights are trained from the next sentence prediction (classification) objective during pretraining.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, +
one for the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the optional initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
intermediate_activations (`tuple(torch.FloatTensor)`, *optional*):
Intermediate activations that can be used to compute hidden states of the model at various layers.
"""
last_hidden_state: torch.FloatTensor = None
pooler_output: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
intermediate_activations: Optional[Tuple[torch.FloatTensor]] = None
class DPTViTHybridEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config, feature_size=None):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.backbone = AutoBackbone.from_config(config.backbone_config)
feature_dim = self.backbone.channels[-1]
if len(config.backbone_config.out_features) != 3:
raise ValueError(
f"Expected backbone to have 3 output features, got {len(config.backbone_config.out_features)}"
)
self.residual_feature_map_index = [0, 1] # Always take the output of the first and second backbone stage
if feature_size is None:
feat_map_shape = config.backbone_featmap_shape
feature_size = feat_map_shape[-2:]
feature_dim = feat_map_shape[1]
else:
feature_size = (
feature_size if isinstance(feature_size, collections.abc.Iterable) else (feature_size, feature_size)
)
feature_dim = self.backbone.channels[-1]
self.image_size = image_size
self.patch_size = patch_size[0]
self.num_channels = num_channels
self.projection = nn.Conv2d(feature_dim, hidden_size, kernel_size=1)
self.cls_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 1, config.hidden_size))
def _resize_pos_embed(self, posemb, grid_size_height, grid_size_width, start_index=1):
posemb_tok = posemb[:, :start_index]
posemb_grid = posemb[0, start_index:]
old_grid_size = int(math.sqrt(len(posemb_grid)))
posemb_grid = posemb_grid.reshape(1, old_grid_size, old_grid_size, -1).permute(0, 3, 1, 2)
posemb_grid = nn.functional.interpolate(posemb_grid, size=(grid_size_height, grid_size_width), mode="bilinear")
posemb_grid = posemb_grid.permute(0, 2, 3, 1).reshape(1, grid_size_height * grid_size_width, -1)
posemb = torch.cat([posemb_tok, posemb_grid], dim=1)
return posemb
def forward(
self, pixel_values: torch.Tensor, interpolate_pos_encoding: bool = False, return_dict: bool = False
) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
if not interpolate_pos_encoding:
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model"
f" ({self.image_size[0]}*{self.image_size[1]})."
)
position_embeddings = self._resize_pos_embed(
self.position_embeddings, height // self.patch_size, width // self.patch_size
)
backbone_output = self.backbone(pixel_values)
features = backbone_output.feature_maps[-1]
# Retrieve also the intermediate activations to use them at later stages
output_hidden_states = [backbone_output.feature_maps[index] for index in self.residual_feature_map_index]
embeddings = self.projection(features).flatten(2).transpose(1, 2)
cls_tokens = self.cls_token.expand(batch_size, -1, -1)
embeddings = torch.cat((cls_tokens, embeddings), dim=1)
# add positional encoding to each token
embeddings = embeddings + position_embeddings
if not return_dict:
return (embeddings, output_hidden_states)
# Return hidden states and intermediate activations
return BaseModelOutputWithIntermediateActivations(
last_hidden_states=embeddings,
intermediate_activations=output_hidden_states,
)
class DPTViTEmbeddings(nn.Module):
"""
Construct the CLS token, position and patch embeddings.
"""
def __init__(self, config):
super().__init__()
self.cls_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
self.patch_embeddings = DPTViTPatchEmbeddings(config)
num_patches = self.patch_embeddings.num_patches
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 1, config.hidden_size))
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.config = config
def _resize_pos_embed(self, posemb, grid_size_height, grid_size_width, start_index=1):
posemb_tok = posemb[:, :start_index]
posemb_grid = posemb[0, start_index:]
old_grid_size = int(math.sqrt(len(posemb_grid)))
posemb_grid = posemb_grid.reshape(1, old_grid_size, old_grid_size, -1).permute(0, 3, 1, 2)
posemb_grid = nn.functional.interpolate(posemb_grid, size=(grid_size_height, grid_size_width), mode="bilinear")
posemb_grid = posemb_grid.permute(0, 2, 3, 1).reshape(1, grid_size_height * grid_size_width, -1)
posemb = torch.cat([posemb_tok, posemb_grid], dim=1)
return posemb
def forward(self, pixel_values, return_dict=False):
batch_size, num_channels, height, width = pixel_values.shape
# possibly interpolate position encodings to handle varying image sizes
patch_size = self.config.patch_size
position_embeddings = self._resize_pos_embed(
self.position_embeddings, height // patch_size, width // patch_size
)
embeddings = self.patch_embeddings(pixel_values)
batch_size, seq_len, _ = embeddings.size()
# add the [CLS] token to the embedded patch tokens
cls_tokens = self.cls_token.expand(batch_size, -1, -1)
embeddings = torch.cat((cls_tokens, embeddings), dim=1)
# add positional encoding to each token
embeddings = embeddings + position_embeddings
embeddings = self.dropout(embeddings)
if not return_dict:
return (embeddings,)
return BaseModelOutputWithIntermediateActivations(last_hidden_states=embeddings)
class DPTViTPatchEmbeddings(nn.Module):
"""
Image to Patch Embedding.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(self, pixel_values):
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
embeddings = self.projection(pixel_values).flatten(2).transpose(1, 2)
return embeddings
# Copied from transformers.models.vit.modeling_vit.ViTSelfAttention with ViT->DPT
class DPTViTSelfAttention(nn.Module):
def __init__(self, config: DPTConfig) -> None:
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size {config.hidden_size,} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.qkv_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self, hidden_states, head_mask: Optional[torch.Tensor] = None, output_attentions: bool = False
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTSelfOutput with ViT->DPT
class DPTViTSelfOutput(nn.Module):
"""
The residual connection is defined in DPTLayer instead of here (as is the case with other models), due to the
layernorm applied before each block.
"""
def __init__(self, config: DPTConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
class DPTViTAttention(nn.Module):
def __init__(self, config: DPTConfig) -> None:
super().__init__()
self.attention = DPTViTSelfAttention(config)
self.output = DPTViTSelfOutput(config)
self.pruned_heads = set()
# Copied from transformers.models.vit.modeling_vit.ViTAttention.prune_heads
def prune_heads(self, heads: Set[int]) -> None:
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attention.num_attention_heads, self.attention.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.attention.query = prune_linear_layer(self.attention.query, index)
self.attention.key = prune_linear_layer(self.attention.key, index)
self.attention.value = prune_linear_layer(self.attention.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.attention.num_attention_heads = self.attention.num_attention_heads - len(heads)
self.attention.all_head_size = self.attention.attention_head_size * self.attention.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
# Copied from transformers.models.vit.modeling_vit.ViTAttention.forward
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
self_outputs = self.attention(hidden_states, head_mask, output_attentions)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.vit.modeling_vit.ViTIntermediate with ViT->DPT
class DPTViTIntermediate(nn.Module):
def __init__(self, config: DPTConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.vit.modeling_vit.ViTOutput with ViT->DPT
class DPTViTOutput(nn.Module):
def __init__(self, config: DPTConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = hidden_states + input_tensor
return hidden_states
# copied from transformers.models.vit.modeling_vit.ViTLayer with ViTConfig->DPTConfig, ViTAttention->DPTViTAttention, ViTIntermediate->DPTViTIntermediate, ViTOutput->DPTViTOutput
class DPTViTLayer(nn.Module):
"""This corresponds to the Block class in the timm implementation."""
def __init__(self, config: DPTConfig) -> None:
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = DPTViTAttention(config)
self.intermediate = DPTViTIntermediate(config)
self.output = DPTViTOutput(config)
self.layernorm_before = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.layernorm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
) -> Union[Tuple[torch.Tensor, torch.Tensor], Tuple[torch.Tensor]]:
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), # in ViT, layernorm is applied before self-attention
head_mask,
output_attentions=output_attentions,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
# first residual connection
hidden_states = attention_output + hidden_states
# in ViT, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
# second residual connection is done here
layer_output = self.output(layer_output, hidden_states)
outputs = (layer_output,) + outputs
return outputs
# copied from transformers.models.vit.modeling_vit.ViTEncoder with ViTConfig -> DPTConfig, ViTLayer->DPTViTLayer
class DPTViTEncoder(nn.Module):
def __init__(self, config: DPTConfig) -> None:
super().__init__()
self.config = config
self.layer = nn.ModuleList([DPTViTLayer(config) for _ in range(config.num_hidden_layers)])
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
) -> Union[tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
layer_head_mask,
)
else:
layer_outputs = layer_module(hidden_states, layer_head_mask, output_attentions)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
class DPTReassembleStage(nn.Module):
"""
This class reassembles the hidden states of the backbone into image-like feature representations at various
resolutions.
This happens in 3 stages:
1. Map the N + 1 tokens to a set of N tokens, by taking into account the readout ([CLS]) token according to
`config.readout_type`.
2. Project the channel dimension of the hidden states according to `config.neck_hidden_sizes`.
3. Resizing the spatial dimensions (height, width).
Args:
config (`[DPTConfig]`):
Model configuration class defining the model architecture.
"""
def __init__(self, config):
super().__init__()
self.config = config
self.layers = nn.ModuleList()
if config.is_hybrid:
self._init_reassemble_dpt_hybrid(config)
else:
self._init_reassemble_dpt(config)
self.neck_ignore_stages = config.neck_ignore_stages
def _init_reassemble_dpt_hybrid(self, config):
r""" "
For DPT-Hybrid the first 2 reassemble layers are set to `nn.Identity()`, please check the official
implementation: https://github.com/isl-org/DPT/blob/f43ef9e08d70a752195028a51be5e1aff227b913/dpt/vit.py#L438
for more details.
"""
for i, factor in zip(range(len(config.neck_hidden_sizes)), config.reassemble_factors):
if i <= 1:
self.layers.append(nn.Identity())
elif i > 1:
self.layers.append(DPTReassembleLayer(config, channels=config.neck_hidden_sizes[i], factor=factor))
if config.readout_type != "project":
raise ValueError(f"Readout type {config.readout_type} is not supported for DPT-Hybrid.")
# When using DPT-Hybrid the readout type is set to "project". The sanity check is done on the config file
self.readout_projects = nn.ModuleList()
for i in range(len(config.neck_hidden_sizes)):
if i <= 1:
self.readout_projects.append(nn.Sequential(nn.Identity()))
elif i > 1:
self.readout_projects.append(
nn.Sequential(nn.Linear(2 * config.hidden_size, config.hidden_size), ACT2FN[config.hidden_act])
)
def _init_reassemble_dpt(self, config):
for i, factor in zip(range(len(config.neck_hidden_sizes)), config.reassemble_factors):
self.layers.append(DPTReassembleLayer(config, channels=config.neck_hidden_sizes[i], factor=factor))
if config.readout_type == "project":
self.readout_projects = nn.ModuleList()
for _ in range(len(config.neck_hidden_sizes)):
self.readout_projects.append(
nn.Sequential(nn.Linear(2 * config.hidden_size, config.hidden_size), ACT2FN[config.hidden_act])
)
def forward(self, hidden_states: List[torch.Tensor]) -> List[torch.Tensor]:
"""
Args:
hidden_states (`List[torch.FloatTensor]`, each of shape `(batch_size, sequence_length + 1, hidden_size)`):
List of hidden states from the backbone.
"""
out = []
for i, hidden_state in enumerate(hidden_states):
if i not in self.neck_ignore_stages:
# reshape to (B, C, H, W)
hidden_state, cls_token = hidden_state[:, 1:], hidden_state[:, 0]
batch_size, sequence_length, num_channels = hidden_state.shape
size = int(math.sqrt(sequence_length))
hidden_state = hidden_state.reshape(batch_size, size, size, num_channels)
hidden_state = hidden_state.permute(0, 3, 1, 2).contiguous()
feature_shape = hidden_state.shape
if self.config.readout_type == "project":
# reshape to (B, H*W, C)
hidden_state = hidden_state.flatten(2).permute((0, 2, 1))
readout = cls_token.unsqueeze(1).expand_as(hidden_state)
# concatenate the readout token to the hidden states and project
hidden_state = self.readout_projects[i](torch.cat((hidden_state, readout), -1))
# reshape back to (B, C, H, W)
hidden_state = hidden_state.permute(0, 2, 1).reshape(feature_shape)
elif self.config.readout_type == "add":
hidden_state = hidden_state.flatten(2) + cls_token.unsqueeze(-1)
hidden_state = hidden_state.reshape(feature_shape)
hidden_state = self.layers[i](hidden_state)
out.append(hidden_state)
return out
class DPTReassembleLayer(nn.Module):
def __init__(self, config, channels, factor):
super().__init__()
# projection
self.projection = nn.Conv2d(in_channels=config.hidden_size, out_channels=channels, kernel_size=1)
# up/down sampling depending on factor
if factor > 1:
self.resize = nn.ConvTranspose2d(channels, channels, kernel_size=factor, stride=factor, padding=0)
elif factor == 1:
self.resize = nn.Identity()
elif factor < 1:
# so should downsample
self.resize = nn.Conv2d(channels, channels, kernel_size=3, stride=int(1 / factor), padding=1)
def forward(self, hidden_state):
hidden_state = self.projection(hidden_state)
hidden_state = self.resize(hidden_state)
return hidden_state
class DPTFeatureFusionStage(nn.Module):
def __init__(self, config):
super().__init__()
self.layers = nn.ModuleList()
for _ in range(len(config.neck_hidden_sizes)):
self.layers.append(DPTFeatureFusionLayer(config))
def forward(self, hidden_states):
# reversing the hidden_states, we start from the last
hidden_states = hidden_states[::-1]
fused_hidden_states = []
# first layer only uses the last hidden_state
fused_hidden_state = self.layers[0](hidden_states[0])
fused_hidden_states.append(fused_hidden_state)
# looping from the last layer to the second
for hidden_state, layer in zip(hidden_states[1:], self.layers[1:]):
fused_hidden_state = layer(fused_hidden_state, hidden_state)
fused_hidden_states.append(fused_hidden_state)
return fused_hidden_states
class DPTPreActResidualLayer(nn.Module):
"""
ResidualConvUnit, pre-activate residual unit.
Args:
config (`[DPTConfig]`):
Model configuration class defining the model architecture.
"""
def __init__(self, config):
super().__init__()
self.use_batch_norm = config.use_batch_norm_in_fusion_residual
self.activation1 = ACT2FN["relu"]
self.convolution1 = nn.Conv2d(
config.fusion_hidden_size,
config.fusion_hidden_size,
kernel_size=3,
stride=1,
padding=1,
bias=not self.use_batch_norm,
)
self.activation2 = ACT2FN["relu"]
self.convolution2 = nn.Conv2d(
config.fusion_hidden_size,
config.fusion_hidden_size,
kernel_size=3,
stride=1,
padding=1,
bias=not self.use_batch_norm,
)
if self.use_batch_norm:
self.batch_norm1 = nn.BatchNorm2d(config.fusion_hidden_size)
self.batch_norm2 = nn.BatchNorm2d(config.fusion_hidden_size)
def forward(self, hidden_state: torch.Tensor) -> torch.Tensor:
residual = hidden_state
hidden_state = self.activation1(hidden_state)
hidden_state = self.convolution1(hidden_state)
if self.use_batch_norm:
hidden_state = self.batch_norm1(hidden_state)
hidden_state = self.activation2(hidden_state)
hidden_state = self.convolution2(hidden_state)
if self.use_batch_norm:
hidden_state = self.batch_norm2(hidden_state)
return hidden_state + residual
class DPTFeatureFusionLayer(nn.Module):
"""Feature fusion layer, merges feature maps from different stages.
Args:
config (`[DPTConfig]`):
Model configuration class defining the model architecture.
align_corners (`bool`, *optional*, defaults to `True`):
The align_corner setting for bilinear upsample.
"""
def __init__(self, config, align_corners=True):
super().__init__()
self.align_corners = align_corners
self.projection = nn.Conv2d(config.fusion_hidden_size, config.fusion_hidden_size, kernel_size=1, bias=True)
self.residual_layer1 = DPTPreActResidualLayer(config)
self.residual_layer2 = DPTPreActResidualLayer(config)
def forward(self, hidden_state, residual=None):
if residual is not None:
if hidden_state.shape != residual.shape:
residual = nn.functional.interpolate(
residual, size=(hidden_state.shape[2], hidden_state.shape[3]), mode="bilinear", align_corners=False
)
hidden_state = hidden_state + self.residual_layer1(residual)
hidden_state = self.residual_layer2(hidden_state)
hidden_state = nn.functional.interpolate(
hidden_state, scale_factor=2, mode="bilinear", align_corners=self.align_corners
)
hidden_state = self.projection(hidden_state)
return hidden_state
class DPTPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = DPTConfig
base_model_prefix = "dpt"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d, nn.ConvTranspose2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, DPTViTEncoder):
module.gradient_checkpointing = value
DPT_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it
as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`ViTConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
DPT_INPUTS_DOCSTRING = r"""
Args:
pixel_values (`torch.FloatTensor` of shape `(batch_size, num_channels, height, width)`):
Pixel values. Pixel values can be obtained using [`AutoImageProcessor`]. See [`DPTImageProcessor.__call__`]
for details.
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple.
"""
@add_start_docstrings(
"The bare DPT Model transformer outputting raw hidden-states without any specific head on top.",
DPT_START_DOCSTRING,
)
class DPTModel(DPTPreTrainedModel):
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
# vit encoder
if config.is_hybrid:
self.embeddings = DPTViTHybridEmbeddings(config)
else:
self.embeddings = DPTViTEmbeddings(config)
self.encoder = DPTViTEncoder(config)
self.layernorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.pooler = DPTViTPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
if self.config.is_hybrid:
return self.embeddings
else:
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(DPT_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPoolingAndIntermediateActivations,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
pixel_values: torch.FloatTensor,
head_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPoolingAndIntermediateActivations]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(pixel_values, return_dict=return_dict)
embedding_last_hidden_states = embedding_output[0] if not return_dict else embedding_output.last_hidden_states
encoder_outputs = self.encoder(
embedding_last_hidden_states,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
sequence_output = self.layernorm(sequence_output)
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
head_outputs = (sequence_output, pooled_output) if pooled_output is not None else (sequence_output,)
return head_outputs + encoder_outputs[1:] + embedding_output[1:]
return BaseModelOutputWithPoolingAndIntermediateActivations(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
intermediate_activations=embedding_output.intermediate_activations,
)
# Copied from transformers.models.vit.modeling_vit.ViTPooler with ViT->DPT
class DPTViTPooler(nn.Module):
def __init__(self, config: DPTConfig):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
def forward(self, hidden_states):
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(first_token_tensor)
pooled_output = self.activation(pooled_output)
return pooled_output
class DPTNeck(nn.Module):
"""
DPTNeck. A neck is a module that is normally used between the backbone and the head. It takes a list of tensors as
input and produces another list of tensors as output. For DPT, it includes 2 stages:
* DPTReassembleStage
* DPTFeatureFusionStage.
Args:
config (dict): config dict.
"""
def __init__(self, config):
super().__init__()
self.config = config
# postprocessing
self.reassemble_stage = DPTReassembleStage(config)
self.convs = nn.ModuleList()
for channel in config.neck_hidden_sizes:
self.convs.append(nn.Conv2d(channel, config.fusion_hidden_size, kernel_size=3, padding=1, bias=False))
# fusion
self.fusion_stage = DPTFeatureFusionStage(config)
def forward(self, hidden_states: List[torch.Tensor]) -> List[torch.Tensor]:
if not isinstance(hidden_states, list):
raise ValueError("hidden_states should be a list of tensors")
if len(hidden_states) != len(self.config.neck_hidden_sizes):
raise ValueError("The number of hidden states should be equal to the number of neck hidden sizes.")
# postprocess hidden states
features = self.reassemble_stage(hidden_states)
features = [self.convs[i](feature) for i, feature in enumerate(features)]
# fusion blocks
output = self.fusion_stage(features)
return output
class DPTDepthEstimationHead(nn.Module):
"""
Output head head consisting of 3 convolutional layers. It progressively halves the feature dimension and upsamples
the predictions to the input resolution after the first convolutional layer (details can be found in the paper's
supplementary material).
"""
def __init__(self, config):
super().__init__()
self.config = config
features = config.fusion_hidden_size
self.head = nn.Sequential(
nn.Conv2d(features, features // 2, kernel_size=3, stride=1, padding=1),
nn.Upsample(scale_factor=2, mode="bilinear", align_corners=True),
nn.Conv2d(features // 2, 32, kernel_size=3, stride=1, padding=1),
ACT2FN["relu"],
nn.Conv2d(32, 1, kernel_size=1, stride=1, padding=0),
ACT2FN["relu"],
)
def forward(self, hidden_states: List[torch.Tensor]) -> torch.Tensor:
# use last features
hidden_states = hidden_states[self.config.head_in_index]
predicted_depth = self.head(hidden_states)
predicted_depth = predicted_depth.squeeze(dim=1)
return predicted_depth
@add_start_docstrings(
"""
DPT Model with a depth estimation head on top (consisting of 3 convolutional layers) e.g. for KITTI, NYUv2.
""",
DPT_START_DOCSTRING,
)
class DPTForDepthEstimation(DPTPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.dpt = DPTModel(config, add_pooling_layer=False)
# Neck
self.neck = DPTNeck(config)
# Depth estimation head
self.head = DPTDepthEstimationHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(DPT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=DepthEstimatorOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: torch.FloatTensor,
head_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], DepthEstimatorOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, height, width)`, *optional*):
Ground truth depth estimation maps for computing the loss.
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, DPTForDepthEstimation
>>> import torch
>>> import numpy as np
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("Intel/dpt-large")
>>> model = DPTForDepthEstimation.from_pretrained("Intel/dpt-large")
>>> # prepare image for the model
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> with torch.no_grad():
... outputs = model(**inputs)
... predicted_depth = outputs.predicted_depth
>>> # interpolate to original size
>>> prediction = torch.nn.functional.interpolate(
... predicted_depth.unsqueeze(1),
... size=image.size[::-1],
... mode="bicubic",
... align_corners=False,
... )
>>> # visualize the prediction
>>> output = prediction.squeeze().cpu().numpy()
>>> formatted = (output * 255 / np.max(output)).astype("uint8")
>>> depth = Image.fromarray(formatted)
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
outputs = self.dpt(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=True, # we need the intermediate hidden states
return_dict=return_dict,
)
hidden_states = outputs.hidden_states if return_dict else outputs[1]
# only keep certain features based on config.backbone_out_indices
# note that the hidden_states also include the initial embeddings
if not self.config.is_hybrid:
hidden_states = [
feature for idx, feature in enumerate(hidden_states[1:]) if idx in self.config.backbone_out_indices
]
else:
backbone_hidden_states = outputs.intermediate_activations if return_dict else list(outputs[-1])
backbone_hidden_states.extend(
feature for idx, feature in enumerate(hidden_states[1:]) if idx in self.config.backbone_out_indices[2:]
)
hidden_states = backbone_hidden_states
hidden_states = self.neck(hidden_states)
predicted_depth = self.head(hidden_states)
loss = None
if labels is not None:
raise NotImplementedError("Training is not implemented yet")
if not return_dict:
if output_hidden_states:
output = (predicted_depth,) + outputs[1:]
else:
output = (predicted_depth,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return DepthEstimatorOutput(
loss=loss,
predicted_depth=predicted_depth,
hidden_states=outputs.hidden_states if output_hidden_states else None,
attentions=outputs.attentions,
)
class DPTSemanticSegmentationHead(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
features = config.fusion_hidden_size
self.head = nn.Sequential(
nn.Conv2d(features, features, kernel_size=3, padding=1, bias=False),
nn.BatchNorm2d(features),
ACT2FN["relu"],
nn.Dropout(config.semantic_classifier_dropout),
nn.Conv2d(features, config.num_labels, kernel_size=1),
nn.Upsample(scale_factor=2, mode="bilinear", align_corners=True),
)
def forward(self, hidden_states: List[torch.Tensor]) -> torch.Tensor:
# use last features
hidden_states = hidden_states[self.config.head_in_index]
logits = self.head(hidden_states)
return logits
class DPTAuxiliaryHead(nn.Module):
def __init__(self, config):
super().__init__()
features = config.fusion_hidden_size
self.head = nn.Sequential(
nn.Conv2d(features, features, kernel_size=3, padding=1, bias=False),
nn.BatchNorm2d(features),
ACT2FN["relu"],
nn.Dropout(0.1, False),
nn.Conv2d(features, config.num_labels, kernel_size=1),
)
def forward(self, hidden_states):
logits = self.head(hidden_states)
return logits
@add_start_docstrings(
"""
DPT Model with a semantic segmentation head on top e.g. for ADE20k, CityScapes.
""",
DPT_START_DOCSTRING,
)
class DPTForSemanticSegmentation(DPTPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.dpt = DPTModel(config, add_pooling_layer=False)
# Neck
self.neck = DPTNeck(config)
# Segmentation head(s)
self.head = DPTSemanticSegmentationHead(config)
self.auxiliary_head = DPTAuxiliaryHead(config) if config.use_auxiliary_head else None
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(DPT_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=SemanticSegmenterOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SemanticSegmenterOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, height, width)`, *optional*):
Ground truth semantic segmentation maps for computing the loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels > 1`, a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, DPTForSemanticSegmentation
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("Intel/dpt-large-ade")
>>> model = DPTForSemanticSegmentation.from_pretrained("Intel/dpt-large-ade")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
outputs = self.dpt(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=True, # we need the intermediate hidden states
return_dict=return_dict,
)
hidden_states = outputs.hidden_states if return_dict else outputs[1]
# only keep certain features based on config.backbone_out_indices
# note that the hidden_states also include the initial embeddings
if not self.config.is_hybrid:
hidden_states = [
feature for idx, feature in enumerate(hidden_states[1:]) if idx in self.config.backbone_out_indices
]
else:
backbone_hidden_states = outputs.intermediate_activations if return_dict else list(outputs[-1])
backbone_hidden_states.extend(
feature for idx, feature in enumerate(hidden_states[1:]) if idx in self.config.backbone_out_indices[2:]
)
hidden_states = backbone_hidden_states
hidden_states = self.neck(hidden_states)
logits = self.head(hidden_states)
auxiliary_logits = None
if self.auxiliary_head is not None:
auxiliary_logits = self.auxiliary_head(hidden_states[-1])
loss = None
if labels is not None:
if self.config.num_labels == 1:
raise ValueError("The number of labels should be greater than one")
else:
# upsample logits to the images' original size
upsampled_logits = nn.functional.interpolate(
logits, size=labels.shape[-2:], mode="bilinear", align_corners=False
)
if auxiliary_logits is not None:
upsampled_auxiliary_logits = nn.functional.interpolate(
auxiliary_logits, size=labels.shape[-2:], mode="bilinear", align_corners=False
)
# compute weighted loss
loss_fct = CrossEntropyLoss(ignore_index=self.config.semantic_loss_ignore_index)
main_loss = loss_fct(upsampled_logits, labels)
auxiliary_loss = loss_fct(upsampled_auxiliary_logits, labels)
loss = main_loss + self.config.auxiliary_loss_weight * auxiliary_loss
if not return_dict:
if output_hidden_states:
output = (logits,) + outputs[1:]
else:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SemanticSegmenterOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states if output_hidden_states else None,
attentions=outputs.attentions,
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 11,797 | src/transformers/models/dpt/convert_dpt_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert DPT checkpoints from the original repository. URL: https://github.com/isl-org/DPT"""
import argparse
import json
from pathlib import Path
import requests
import torch
from huggingface_hub import cached_download, hf_hub_url
from PIL import Image
from transformers import DPTConfig, DPTFeatureExtractor, DPTForDepthEstimation, DPTForSemanticSegmentation
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
def get_dpt_config(checkpoint_url):
config = DPTConfig()
if "large" in checkpoint_url:
config.hidden_size = 1024
config.intermediate_size = 4096
config.num_hidden_layers = 24
config.num_attention_heads = 16
config.backbone_out_indices = [5, 11, 17, 23]
config.neck_hidden_sizes = [256, 512, 1024, 1024]
expected_shape = (1, 384, 384)
if "ade" in checkpoint_url:
config.use_batch_norm_in_fusion_residual = True
config.num_labels = 150
repo_id = "huggingface/label-files"
filename = "ade20k-id2label.json"
id2label = json.load(open(cached_download(hf_hub_url(repo_id, filename, repo_type="dataset")), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
expected_shape = [1, 150, 480, 480]
return config, expected_shape
def remove_ignore_keys_(state_dict):
ignore_keys = ["pretrained.model.head.weight", "pretrained.model.head.bias"]
for k in ignore_keys:
state_dict.pop(k, None)
def rename_key(name):
if (
"pretrained.model" in name
and "cls_token" not in name
and "pos_embed" not in name
and "patch_embed" not in name
):
name = name.replace("pretrained.model", "dpt.encoder")
if "pretrained.model" in name:
name = name.replace("pretrained.model", "dpt.embeddings")
if "patch_embed" in name:
name = name.replace("patch_embed", "patch_embeddings")
if "pos_embed" in name:
name = name.replace("pos_embed", "position_embeddings")
if "attn.proj" in name:
name = name.replace("attn.proj", "attention.output.dense")
if "proj" in name and "project" not in name:
name = name.replace("proj", "projection")
if "blocks" in name:
name = name.replace("blocks", "layer")
if "mlp.fc1" in name:
name = name.replace("mlp.fc1", "intermediate.dense")
if "mlp.fc2" in name:
name = name.replace("mlp.fc2", "output.dense")
if "norm1" in name:
name = name.replace("norm1", "layernorm_before")
if "norm2" in name:
name = name.replace("norm2", "layernorm_after")
if "scratch.output_conv" in name:
name = name.replace("scratch.output_conv", "head")
if "scratch" in name:
name = name.replace("scratch", "neck")
if "layer1_rn" in name:
name = name.replace("layer1_rn", "convs.0")
if "layer2_rn" in name:
name = name.replace("layer2_rn", "convs.1")
if "layer3_rn" in name:
name = name.replace("layer3_rn", "convs.2")
if "layer4_rn" in name:
name = name.replace("layer4_rn", "convs.3")
if "refinenet" in name:
layer_idx = int(name[len("neck.refinenet") : len("neck.refinenet") + 1])
# tricky here: we need to map 4 to 0, 3 to 1, 2 to 2 and 1 to 3
name = name.replace(f"refinenet{layer_idx}", f"fusion_stage.layers.{abs(layer_idx-4)}")
if "out_conv" in name:
name = name.replace("out_conv", "projection")
if "resConfUnit1" in name:
name = name.replace("resConfUnit1", "residual_layer1")
if "resConfUnit2" in name:
name = name.replace("resConfUnit2", "residual_layer2")
if "conv1" in name:
name = name.replace("conv1", "convolution1")
if "conv2" in name:
name = name.replace("conv2", "convolution2")
# readout blocks
if "pretrained.act_postprocess1.0.project.0" in name:
name = name.replace("pretrained.act_postprocess1.0.project.0", "neck.reassemble_stage.readout_projects.0.0")
if "pretrained.act_postprocess2.0.project.0" in name:
name = name.replace("pretrained.act_postprocess2.0.project.0", "neck.reassemble_stage.readout_projects.1.0")
if "pretrained.act_postprocess3.0.project.0" in name:
name = name.replace("pretrained.act_postprocess3.0.project.0", "neck.reassemble_stage.readout_projects.2.0")
if "pretrained.act_postprocess4.0.project.0" in name:
name = name.replace("pretrained.act_postprocess4.0.project.0", "neck.reassemble_stage.readout_projects.3.0")
# resize blocks
if "pretrained.act_postprocess1.3" in name:
name = name.replace("pretrained.act_postprocess1.3", "neck.reassemble_stage.layers.0.projection")
if "pretrained.act_postprocess1.4" in name:
name = name.replace("pretrained.act_postprocess1.4", "neck.reassemble_stage.layers.0.resize")
if "pretrained.act_postprocess2.3" in name:
name = name.replace("pretrained.act_postprocess2.3", "neck.reassemble_stage.layers.1.projection")
if "pretrained.act_postprocess2.4" in name:
name = name.replace("pretrained.act_postprocess2.4", "neck.reassemble_stage.layers.1.resize")
if "pretrained.act_postprocess3.3" in name:
name = name.replace("pretrained.act_postprocess3.3", "neck.reassemble_stage.layers.2.projection")
if "pretrained.act_postprocess4.3" in name:
name = name.replace("pretrained.act_postprocess4.3", "neck.reassemble_stage.layers.3.projection")
if "pretrained.act_postprocess4.4" in name:
name = name.replace("pretrained.act_postprocess4.4", "neck.reassemble_stage.layers.3.resize")
if "pretrained" in name:
name = name.replace("pretrained", "dpt")
if "bn" in name:
name = name.replace("bn", "batch_norm")
if "head" in name:
name = name.replace("head", "head.head")
if "encoder.norm" in name:
name = name.replace("encoder.norm", "layernorm")
if "auxlayer" in name:
name = name.replace("auxlayer", "auxiliary_head.head")
return name
# we split up the matrix of each encoder layer into queries, keys and values
def read_in_q_k_v(state_dict, config):
for i in range(config.num_hidden_layers):
# read in weights + bias of input projection layer (in timm, this is a single matrix + bias)
in_proj_weight = state_dict.pop(f"dpt.encoder.layer.{i}.attn.qkv.weight")
in_proj_bias = state_dict.pop(f"dpt.encoder.layer.{i}.attn.qkv.bias")
# next, add query, keys and values (in that order) to the state dict
state_dict[f"dpt.encoder.layer.{i}.attention.attention.query.weight"] = in_proj_weight[: config.hidden_size, :]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.query.bias"] = in_proj_bias[: config.hidden_size]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.key.weight"] = in_proj_weight[
config.hidden_size : config.hidden_size * 2, :
]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.key.bias"] = in_proj_bias[
config.hidden_size : config.hidden_size * 2
]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.value.weight"] = in_proj_weight[
-config.hidden_size :, :
]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.value.bias"] = in_proj_bias[-config.hidden_size :]
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
im = Image.open(requests.get(url, stream=True).raw)
return im
@torch.no_grad()
def convert_dpt_checkpoint(checkpoint_url, pytorch_dump_folder_path, push_to_hub, model_name):
"""
Copy/paste/tweak model's weights to our DPT structure.
"""
# define DPT configuration based on URL
config, expected_shape = get_dpt_config(checkpoint_url)
# load original state_dict from URL
state_dict = torch.hub.load_state_dict_from_url(checkpoint_url, map_location="cpu")
# remove certain keys
remove_ignore_keys_(state_dict)
# rename keys
for key in state_dict.copy().keys():
val = state_dict.pop(key)
state_dict[rename_key(key)] = val
# read in qkv matrices
read_in_q_k_v(state_dict, config)
# load HuggingFace model
model = DPTForSemanticSegmentation(config) if "ade" in checkpoint_url else DPTForDepthEstimation(config)
model.load_state_dict(state_dict)
model.eval()
# Check outputs on an image
size = 480 if "ade" in checkpoint_url else 384
feature_extractor = DPTFeatureExtractor(size=size)
image = prepare_img()
encoding = feature_extractor(image, return_tensors="pt")
# forward pass
outputs = model(**encoding).logits if "ade" in checkpoint_url else model(**encoding).predicted_depth
# Assert logits
expected_slice = torch.tensor([[6.3199, 6.3629, 6.4148], [6.3850, 6.3615, 6.4166], [6.3519, 6.3176, 6.3575]])
if "ade" in checkpoint_url:
expected_slice = torch.tensor([[4.0480, 4.2420, 4.4360], [4.3124, 4.5693, 4.8261], [4.5768, 4.8965, 5.2163]])
assert outputs.shape == torch.Size(expected_shape)
assert (
torch.allclose(outputs[0, 0, :3, :3], expected_slice, atol=1e-4)
if "ade" in checkpoint_url
else torch.allclose(outputs[0, :3, :3], expected_slice)
)
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
print(f"Saving model to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
print(f"Saving feature extractor to {pytorch_dump_folder_path}")
feature_extractor.save_pretrained(pytorch_dump_folder_path)
if push_to_hub:
print("Pushing model to hub...")
model.push_to_hub(
repo_path_or_name=Path(pytorch_dump_folder_path, model_name),
organization="nielsr",
commit_message="Add model",
use_temp_dir=True,
)
feature_extractor.push_to_hub(
repo_path_or_name=Path(pytorch_dump_folder_path, model_name),
organization="nielsr",
commit_message="Add feature extractor",
use_temp_dir=True,
)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--checkpoint_url",
default="https://github.com/intel-isl/DPT/releases/download/1_0/dpt_large-midas-2f21e586.pt",
type=str,
help="URL of the original DPT checkpoint you'd like to convert.",
)
parser.add_argument(
"--pytorch_dump_folder_path",
default=None,
type=str,
required=True,
help="Path to the output PyTorch model directory.",
)
parser.add_argument(
"--push_to_hub",
action="store_true",
)
parser.add_argument(
"--model_name",
default="dpt-large",
type=str,
help="Name of the model, in case you're pushing to the hub.",
)
args = parser.parse_args()
convert_dpt_checkpoint(args.checkpoint_url, args.pytorch_dump_folder_path, args.push_to_hub, args.model_name)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 1,165 | src/transformers/models/dpt/feature_extraction_dpt.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Feature extractor class for DPT."""
import warnings
from ...utils import logging
from .image_processing_dpt import DPTImageProcessor
logger = logging.get_logger(__name__)
class DPTFeatureExtractor(DPTImageProcessor):
def __init__(self, *args, **kwargs) -> None:
warnings.warn(
"The class DPTFeatureExtractor is deprecated and will be removed in version 5 of Transformers. Please"
" use DPTImageProcessor instead.",
FutureWarning,
)
super().__init__(*args, **kwargs)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 13,008 | src/transformers/models/dpt/convert_dpt_hybrid_to_pytorch.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert DPT checkpoints from the original repository. URL: https://github.com/isl-org/DPT"""
import argparse
import json
from pathlib import Path
import requests
import torch
from huggingface_hub import cached_download, hf_hub_url
from PIL import Image
from transformers import DPTConfig, DPTFeatureExtractor, DPTForDepthEstimation, DPTForSemanticSegmentation
from transformers.utils import logging
logging.set_verbosity_info()
logger = logging.get_logger(__name__)
def get_dpt_config(checkpoint_url):
config = DPTConfig(embedding_type="hybrid")
if "large" in checkpoint_url:
config.hidden_size = 1024
config.intermediate_size = 4096
config.num_hidden_layers = 24
config.num_attention_heads = 16
config.backbone_out_indices = [5, 11, 17, 23]
config.neck_hidden_sizes = [256, 512, 1024, 1024]
expected_shape = (1, 384, 384)
if "nyu" or "midas" in checkpoint_url:
config.hidden_size = 768
config.reassemble_factors = [1, 1, 1, 0.5]
config.neck_hidden_sizes = [256, 512, 768, 768]
config.num_labels = 150
config.patch_size = 16
expected_shape = (1, 384, 384)
config.use_batch_norm_in_fusion_residual = False
config.readout_type = "project"
if "ade" in checkpoint_url:
config.use_batch_norm_in_fusion_residual = True
config.hidden_size = 768
config.reassemble_stage = [1, 1, 1, 0.5]
config.num_labels = 150
config.patch_size = 16
repo_id = "huggingface/label-files"
filename = "ade20k-id2label.json"
id2label = json.load(open(cached_download(hf_hub_url(repo_id, filename, repo_type="dataset")), "r"))
id2label = {int(k): v for k, v in id2label.items()}
config.id2label = id2label
config.label2id = {v: k for k, v in id2label.items()}
expected_shape = [1, 150, 480, 480]
return config, expected_shape
def remove_ignore_keys_(state_dict):
ignore_keys = ["pretrained.model.head.weight", "pretrained.model.head.bias"]
for k in ignore_keys:
state_dict.pop(k, None)
def rename_key(name):
if (
"pretrained.model" in name
and "cls_token" not in name
and "pos_embed" not in name
and "patch_embed" not in name
):
name = name.replace("pretrained.model", "dpt.encoder")
if "pretrained.model" in name:
name = name.replace("pretrained.model", "dpt.embeddings")
if "patch_embed" in name:
name = name.replace("patch_embed", "")
if "pos_embed" in name:
name = name.replace("pos_embed", "position_embeddings")
if "attn.proj" in name:
name = name.replace("attn.proj", "attention.output.dense")
if "proj" in name and "project" not in name:
name = name.replace("proj", "projection")
if "blocks" in name:
name = name.replace("blocks", "layer")
if "mlp.fc1" in name:
name = name.replace("mlp.fc1", "intermediate.dense")
if "mlp.fc2" in name:
name = name.replace("mlp.fc2", "output.dense")
if "norm1" in name and "backbone" not in name:
name = name.replace("norm1", "layernorm_before")
if "norm2" in name and "backbone" not in name:
name = name.replace("norm2", "layernorm_after")
if "scratch.output_conv" in name:
name = name.replace("scratch.output_conv", "head")
if "scratch" in name:
name = name.replace("scratch", "neck")
if "layer1_rn" in name:
name = name.replace("layer1_rn", "convs.0")
if "layer2_rn" in name:
name = name.replace("layer2_rn", "convs.1")
if "layer3_rn" in name:
name = name.replace("layer3_rn", "convs.2")
if "layer4_rn" in name:
name = name.replace("layer4_rn", "convs.3")
if "refinenet" in name:
layer_idx = int(name[len("neck.refinenet") : len("neck.refinenet") + 1])
# tricky here: we need to map 4 to 0, 3 to 1, 2 to 2 and 1 to 3
name = name.replace(f"refinenet{layer_idx}", f"fusion_stage.layers.{abs(layer_idx-4)}")
if "out_conv" in name:
name = name.replace("out_conv", "projection")
if "resConfUnit1" in name:
name = name.replace("resConfUnit1", "residual_layer1")
if "resConfUnit2" in name:
name = name.replace("resConfUnit2", "residual_layer2")
if "conv1" in name:
name = name.replace("conv1", "convolution1")
if "conv2" in name:
name = name.replace("conv2", "convolution2")
# readout blocks
if "pretrained.act_postprocess1.0.project.0" in name:
name = name.replace("pretrained.act_postprocess1.0.project.0", "neck.reassemble_stage.readout_projects.0.0")
if "pretrained.act_postprocess2.0.project.0" in name:
name = name.replace("pretrained.act_postprocess2.0.project.0", "neck.reassemble_stage.readout_projects.1.0")
if "pretrained.act_postprocess3.0.project.0" in name:
name = name.replace("pretrained.act_postprocess3.0.project.0", "neck.reassemble_stage.readout_projects.2.0")
if "pretrained.act_postprocess4.0.project.0" in name:
name = name.replace("pretrained.act_postprocess4.0.project.0", "neck.reassemble_stage.readout_projects.3.0")
# resize blocks
if "pretrained.act_postprocess1.3" in name:
name = name.replace("pretrained.act_postprocess1.3", "neck.reassemble_stage.layers.0.projection")
if "pretrained.act_postprocess1.4" in name:
name = name.replace("pretrained.act_postprocess1.4", "neck.reassemble_stage.layers.0.resize")
if "pretrained.act_postprocess2.3" in name:
name = name.replace("pretrained.act_postprocess2.3", "neck.reassemble_stage.layers.1.projection")
if "pretrained.act_postprocess2.4" in name:
name = name.replace("pretrained.act_postprocess2.4", "neck.reassemble_stage.layers.1.resize")
if "pretrained.act_postprocess3.3" in name:
name = name.replace("pretrained.act_postprocess3.3", "neck.reassemble_stage.layers.2.projection")
if "pretrained.act_postprocess4.3" in name:
name = name.replace("pretrained.act_postprocess4.3", "neck.reassemble_stage.layers.3.projection")
if "pretrained.act_postprocess4.4" in name:
name = name.replace("pretrained.act_postprocess4.4", "neck.reassemble_stage.layers.3.resize")
if "pretrained" in name:
name = name.replace("pretrained", "dpt")
if "bn" in name:
name = name.replace("bn", "batch_norm")
if "head" in name:
name = name.replace("head", "head.head")
if "encoder.norm" in name:
name = name.replace("encoder.norm", "layernorm")
if "auxlayer" in name:
name = name.replace("auxlayer", "auxiliary_head.head")
if "backbone" in name:
name = name.replace("backbone", "backbone.bit.encoder")
if ".." in name:
name = name.replace("..", ".")
if "stem.conv" in name:
name = name.replace("stem.conv", "bit.embedder.convolution")
if "blocks" in name:
name = name.replace("blocks", "layers")
if "convolution" in name and "backbone" in name:
name = name.replace("convolution", "conv")
if "layer" in name and "backbone" in name:
name = name.replace("layer", "layers")
if "backbone.bit.encoder.bit" in name:
name = name.replace("backbone.bit.encoder.bit", "backbone.bit")
if "embedder.conv" in name:
name = name.replace("embedder.conv", "embedder.convolution")
if "backbone.bit.encoder.stem.norm" in name:
name = name.replace("backbone.bit.encoder.stem.norm", "backbone.bit.embedder.norm")
return name
# we split up the matrix of each encoder layer into queries, keys and values
def read_in_q_k_v(state_dict, config):
for i in range(config.num_hidden_layers):
# read in weights + bias of input projection layer (in timm, this is a single matrix + bias)
in_proj_weight = state_dict.pop(f"dpt.encoder.layer.{i}.attn.qkv.weight")
in_proj_bias = state_dict.pop(f"dpt.encoder.layer.{i}.attn.qkv.bias")
# next, add query, keys and values (in that order) to the state dict
state_dict[f"dpt.encoder.layer.{i}.attention.attention.query.weight"] = in_proj_weight[: config.hidden_size, :]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.query.bias"] = in_proj_bias[: config.hidden_size]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.key.weight"] = in_proj_weight[
config.hidden_size : config.hidden_size * 2, :
]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.key.bias"] = in_proj_bias[
config.hidden_size : config.hidden_size * 2
]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.value.weight"] = in_proj_weight[
-config.hidden_size :, :
]
state_dict[f"dpt.encoder.layer.{i}.attention.attention.value.bias"] = in_proj_bias[-config.hidden_size :]
# We will verify our results on an image of cute cats
def prepare_img():
url = "http://images.cocodataset.org/val2017/000000039769.jpg"
im = Image.open(requests.get(url, stream=True).raw)
return im
@torch.no_grad()
def convert_dpt_checkpoint(checkpoint_url, pytorch_dump_folder_path, push_to_hub, model_name, show_prediction):
"""
Copy/paste/tweak model's weights to our DPT structure.
"""
# define DPT configuration based on URL
config, expected_shape = get_dpt_config(checkpoint_url)
# load original state_dict from URL
# state_dict = torch.hub.load_state_dict_from_url(checkpoint_url, map_location="cpu")
state_dict = torch.load(checkpoint_url, map_location="cpu")
# remove certain keys
remove_ignore_keys_(state_dict)
# rename keys
for key in state_dict.copy().keys():
val = state_dict.pop(key)
state_dict[rename_key(key)] = val
# read in qkv matrices
read_in_q_k_v(state_dict, config)
# load HuggingFace model
model = DPTForSemanticSegmentation(config) if "ade" in checkpoint_url else DPTForDepthEstimation(config)
model.load_state_dict(state_dict)
model.eval()
# Check outputs on an image
size = 480 if "ade" in checkpoint_url else 384
feature_extractor = DPTFeatureExtractor(size=size)
image = prepare_img()
encoding = feature_extractor(image, return_tensors="pt")
# forward pass
outputs = model(**encoding).logits if "ade" in checkpoint_url else model(**encoding).predicted_depth
if show_prediction:
prediction = (
torch.nn.functional.interpolate(
outputs.unsqueeze(1),
size=(image.size[1], image.size[0]),
mode="bicubic",
align_corners=False,
)
.squeeze()
.cpu()
.numpy()
)
Image.fromarray((prediction / prediction.max()) * 255).show()
if pytorch_dump_folder_path is not None:
Path(pytorch_dump_folder_path).mkdir(exist_ok=True)
print(f"Saving model to {pytorch_dump_folder_path}")
model.save_pretrained(pytorch_dump_folder_path)
print(f"Saving feature extractor to {pytorch_dump_folder_path}")
feature_extractor.save_pretrained(pytorch_dump_folder_path)
if push_to_hub:
model.push_to_hub("ybelkada/dpt-hybrid-midas")
feature_extractor.push_to_hub("ybelkada/dpt-hybrid-midas")
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--checkpoint_url",
default="https://github.com/intel-isl/DPT/releases/download/1_0/dpt_large-midas-2f21e586.pt",
type=str,
help="URL of the original DPT checkpoint you'd like to convert.",
)
parser.add_argument(
"--pytorch_dump_folder_path",
default=None,
type=str,
required=False,
help="Path to the output PyTorch model directory.",
)
parser.add_argument(
"--push_to_hub",
action="store_true",
)
parser.add_argument(
"--model_name",
default="dpt-large",
type=str,
help="Name of the model, in case you're pushing to the hub.",
)
parser.add_argument(
"--show_prediction",
action="store_true",
)
args = parser.parse_args()
convert_dpt_checkpoint(
args.checkpoint_url, args.pytorch_dump_folder_path, args.push_to_hub, args.model_name, args.show_prediction
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 11,302 | src/transformers/models/dpt/configuration_dpt.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" DPT model configuration"""
import copy
from ...configuration_utils import PretrainedConfig
from ...utils import logging
from ..bit import BitConfig
logger = logging.get_logger(__name__)
DPT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"Intel/dpt-large": "https://huggingface.co/Intel/dpt-large/resolve/main/config.json",
# See all DPT models at https://huggingface.co/models?filter=dpt
}
class DPTConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`DPTModel`]. It is used to instantiate an DPT
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the DPT
[Intel/dpt-large](https://huggingface.co/Intel/dpt-large) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
image_size (`int`, *optional*, defaults to 384):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 16):
The size (resolution) of each patch.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
qkv_bias (`bool`, *optional*, defaults to `True`):
Whether to add a bias to the queries, keys and values.
backbone_out_indices (`List[int]`, *optional*, defaults to `[2, 5, 8, 11]`):
Indices of the intermediate hidden states to use from backbone.
readout_type (`str`, *optional*, defaults to `"project"`):
The readout type to use when processing the readout token (CLS token) of the intermediate hidden states of
the ViT backbone. Can be one of [`"ignore"`, `"add"`, `"project"`].
- "ignore" simply ignores the CLS token.
- "add" passes the information from the CLS token to all other tokens by adding the representations.
- "project" passes information to the other tokens by concatenating the readout to all other tokens before
projecting the
representation to the original feature dimension D using a linear layer followed by a GELU non-linearity.
is_hybrid (`bool`, *optional*, defaults to `False`):
Whether to use a hybrid backbone. Useful in the context of loading DPT-Hybrid models.
reassemble_factors (`List[int]`, *optional*, defaults to `[4, 2, 1, 0.5]`):
The up/downsampling factors of the reassemble layers.
neck_hidden_sizes (`List[str]`, *optional*, defaults to [96, 192, 384, 768]):
The hidden sizes to project to for the feature maps of the backbone.
fusion_hidden_size (`int`, *optional*, defaults to 256):
The number of channels before fusion.
head_in_index (`int`, *optional*, defaults to -1):
The index of the features to use in the heads.
use_batch_norm_in_fusion_residual (`bool`, *optional*, defaults to `False`):
Whether to use batch normalization in the pre-activate residual units of the fusion blocks.
use_auxiliary_head (`bool`, *optional*, defaults to `True`):
Whether to use an auxiliary head during training.
auxiliary_loss_weight (`float`, *optional*, defaults to 0.4):
Weight of the cross-entropy loss of the auxiliary head.
semantic_loss_ignore_index (`int`, *optional*, defaults to 255):
The index that is ignored by the loss function of the semantic segmentation model.
semantic_classifier_dropout (`float`, *optional*, defaults to 0.1):
The dropout ratio for the semantic classification head.
backbone_featmap_shape (`List[int]`, *optional*, defaults to `[1, 1024, 24, 24]`):
Used only for the `hybrid` embedding type. The shape of the feature maps of the backbone.
neck_ignore_stages (`List[int]`, *optional*, defaults to `[0, 1]`):
Used only for the `hybrid` embedding type. The stages of the readout layers to ignore.
backbone_config (`Union[Dict[str, Any], PretrainedConfig]`, *optional*):
Used only for the `hybrid` embedding type. The configuration of the backbone in a dictionary.
Example:
```python
>>> from transformers import DPTModel, DPTConfig
>>> # Initializing a DPT dpt-large style configuration
>>> configuration = DPTConfig()
>>> # Initializing a model from the dpt-large style configuration
>>> model = DPTModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "dpt"
def __init__(
self,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.0,
initializer_range=0.02,
layer_norm_eps=1e-12,
image_size=384,
patch_size=16,
num_channels=3,
is_hybrid=False,
qkv_bias=True,
backbone_out_indices=[2, 5, 8, 11],
readout_type="project",
reassemble_factors=[4, 2, 1, 0.5],
neck_hidden_sizes=[96, 192, 384, 768],
fusion_hidden_size=256,
head_in_index=-1,
use_batch_norm_in_fusion_residual=False,
use_auxiliary_head=True,
auxiliary_loss_weight=0.4,
semantic_loss_ignore_index=255,
semantic_classifier_dropout=0.1,
backbone_featmap_shape=[1, 1024, 24, 24],
neck_ignore_stages=[0, 1],
backbone_config=None,
**kwargs,
):
super().__init__(**kwargs)
self.hidden_size = hidden_size
self.is_hybrid = is_hybrid
if self.is_hybrid:
if backbone_config is None:
logger.info("Initializing the config with a `BiT` backbone.")
backbone_config = {
"global_padding": "same",
"layer_type": "bottleneck",
"depths": [3, 4, 9],
"out_features": ["stage1", "stage2", "stage3"],
"embedding_dynamic_padding": True,
}
self.backbone_config = BitConfig(**backbone_config)
elif isinstance(backbone_config, dict):
logger.info("Initializing the config with a `BiT` backbone.")
self.backbone_config = BitConfig(**backbone_config)
elif isinstance(backbone_config, PretrainedConfig):
self.backbone_config = backbone_config
else:
raise ValueError(
f"backbone_config must be a dictionary or a `PretrainedConfig`, got {backbone_config.__class__}."
)
self.backbone_featmap_shape = backbone_featmap_shape
self.neck_ignore_stages = neck_ignore_stages
if readout_type != "project":
raise ValueError("Readout type must be 'project' when using `DPT-hybrid` mode.")
else:
self.backbone_config = None
self.backbone_featmap_shape = None
self.neck_ignore_stages = []
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.qkv_bias = qkv_bias
self.backbone_out_indices = backbone_out_indices
if readout_type not in ["ignore", "add", "project"]:
raise ValueError("Readout_type must be one of ['ignore', 'add', 'project']")
self.readout_type = readout_type
self.reassemble_factors = reassemble_factors
self.neck_hidden_sizes = neck_hidden_sizes
self.fusion_hidden_size = fusion_hidden_size
self.head_in_index = head_in_index
self.use_batch_norm_in_fusion_residual = use_batch_norm_in_fusion_residual
# auxiliary head attributes (semantic segmentation)
self.use_auxiliary_head = use_auxiliary_head
self.auxiliary_loss_weight = auxiliary_loss_weight
self.semantic_loss_ignore_index = semantic_loss_ignore_index
self.semantic_classifier_dropout = semantic_classifier_dropout
def to_dict(self):
"""
Serializes this instance to a Python dictionary. Override the default [`~PretrainedConfig.to_dict`]. Returns:
`Dict[str, any]`: Dictionary of all the attributes that make up this configuration instance,
"""
output = copy.deepcopy(self.__dict__)
if output["backbone_config"] is not None:
output["backbone_config"] = self.backbone_config.to_dict()
output["model_type"] = self.__class__.model_type
return output
|
27182812/ChatGLM-LLaMA-chinese-insturct | 18,212 | src/transformers/models/dpt/image_processing_dpt.py | # coding=utf-8
# Copyright 2022 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Image processor class for DPT."""
import math
from typing import Dict, Iterable, List, Optional, Tuple, Union
import numpy as np
from ...image_processing_utils import BaseImageProcessor, BatchFeature, get_size_dict
from ...image_transforms import normalize, rescale, resize, to_channel_dimension_format
from ...image_utils import (
IMAGENET_STANDARD_MEAN,
IMAGENET_STANDARD_STD,
ChannelDimension,
ImageInput,
PILImageResampling,
get_image_size,
is_torch_available,
is_torch_tensor,
make_list_of_images,
to_numpy_array,
valid_images,
)
from ...utils import TensorType, is_vision_available, logging
if is_torch_available():
import torch
if is_vision_available():
import PIL
logger = logging.get_logger(__name__)
def get_resize_output_image_size(
input_image: np.ndarray, output_size: Union[int, Iterable[int]], keep_aspect_ratio: bool, multiple: int
) -> Tuple[int, int]:
def constraint_to_multiple_of(val, multiple, min_val=0, max_val=None):
x = round(val / multiple) * multiple
if max_val is not None and x > max_val:
x = math.floor(val / multiple) * multiple
if x < min_val:
x = math.ceil(val / multiple) * multiple
return x
output_size = (output_size, output_size) if isinstance(output_size, int) else output_size
input_height, input_width = get_image_size(input_image)
output_height, output_width = output_size
# determine new height and width
scale_height = output_height / input_height
scale_width = output_width / input_width
if keep_aspect_ratio:
# scale as little as possible
if abs(1 - scale_width) < abs(1 - scale_height):
# fit width
scale_height = scale_width
else:
# fit height
scale_width = scale_height
new_height = constraint_to_multiple_of(scale_height * input_height, multiple=multiple)
new_width = constraint_to_multiple_of(scale_width * input_width, multiple=multiple)
return (new_height, new_width)
class DPTImageProcessor(BaseImageProcessor):
r"""
Constructs a DPT image processor.
Args:
do_resize (`bool`, *optional*, defaults to `True`):
Whether to resize the image's (height, width) dimensions. Can be overidden by `do_resize` in `preprocess`.
size (`Dict[str, int]` *optional*, defaults to `{"height": 384, "width": 384}`):
Size of the image after resizing. Can be overidden by `size` in `preprocess`.
keep_aspect_ratio (`bool`, *optional*, defaults to `False`):
If `True`, the image is resized to the largest possible size such that the aspect ratio is preserved. Can
be overidden by `keep_aspect_ratio` in `preprocess`.
ensure_multiple_of (`int`, *optional*, defaults to `1`):
If `do_resize` is `True`, the image is resized to a size that is a multiple of this value. Can be overidden
by `ensure_multiple_of` in `preprocess`.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BILINEAR`):
Defines the resampling filter to use if resizing the image. Can be overidden by `resample` in `preprocess`.
do_rescale (`bool`, *optional*, defaults to `True`):
Whether to rescale the image by the specified scale `rescale_factor`. Can be overidden by `do_rescale` in
`preprocess`.
rescale_factor (`int` or `float`, *optional*, defaults to `1/255`):
Scale factor to use if rescaling the image. Can be overidden by `rescale_factor` in `preprocess`.
do_normalize (`bool`, *optional*, defaults to `True`):
Whether to normalize the image. Can be overridden by the `do_normalize` parameter in the `preprocess`
method.
image_mean (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_MEAN`):
Mean to use if normalizing the image. This is a float or list of floats the length of the number of
channels in the image. Can be overridden by the `image_mean` parameter in the `preprocess` method.
image_std (`float` or `List[float]`, *optional*, defaults to `IMAGENET_STANDARD_STD`):
Standard deviation to use if normalizing the image. This is a float or list of floats the length of the
number of channels in the image. Can be overridden by the `image_std` parameter in the `preprocess` method.
"""
model_input_names = ["pixel_values"]
def __init__(
self,
do_resize: bool = True,
size: Dict[str, int] = None,
resample: PILImageResampling = PILImageResampling.BILINEAR,
keep_aspect_ratio: bool = False,
ensure_multiple_of: int = 1,
do_rescale: bool = True,
rescale_factor: Union[int, float] = 1 / 255,
do_normalize: bool = True,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
**kwargs,
) -> None:
super().__init__(**kwargs)
size = size if size is not None else {"height": 384, "width": 384}
size = get_size_dict(size)
self.do_resize = do_resize
self.size = size
self.keep_aspect_ratio = keep_aspect_ratio
self.ensure_multiple_of = ensure_multiple_of
self.resample = resample
self.do_rescale = do_rescale
self.rescale_factor = rescale_factor
self.do_normalize = do_normalize
self.image_mean = image_mean if image_mean is not None else IMAGENET_STANDARD_MEAN
self.image_std = image_std if image_std is not None else IMAGENET_STANDARD_STD
def resize(
self,
image: np.ndarray,
size: Dict[str, int],
keep_aspect_ratio: bool = False,
ensure_multiple_of: int = 1,
resample: PILImageResampling = PILImageResampling.BICUBIC,
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Resize an image to target size `(size["height"], size["width"])`. If `keep_aspect_ratio` is `True`, the image
is resized to the largest possible size such that the aspect ratio is preserved. If `ensure_multiple_of` is
set, the image is resized to a size that is a multiple of this value.
Args:
image (`np.ndarray`):
Image to resize.
size (`Dict[str, int]`):
Target size of the output image.
keep_aspect_ratio (`bool`, *optional*, defaults to `False`):
If `True`, the image is resized to the largest possible size such that the aspect ratio is preserved.
ensure_multiple_of (`int`, *optional*, defaults to `1`):
The image is resized to a size that is a multiple of this value.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BICUBIC`):
Defines the resampling filter to use if resizing the image. Otherwise, the image is resized to size
specified in `size`.
resample (`PILImageResampling`, *optional*, defaults to `PILImageResampling.BICUBIC`):
Resampling filter to use when resiizing the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
size = get_size_dict(size)
if "height" not in size or "width" not in size:
raise ValueError(f"The size dictionary must contain the keys 'height' and 'width'. Got {size.keys()}")
output_size = get_resize_output_image_size(
image,
output_size=(size["height"], size["width"]),
keep_aspect_ratio=keep_aspect_ratio,
multiple=ensure_multiple_of,
)
return resize(image, size=output_size, resample=resample, data_format=data_format, **kwargs)
def rescale(
self,
image: np.ndarray,
scale: Union[int, float],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
):
"""
Rescale an image by a scale factor. image = image * scale.
Args:
image (`np.ndarray`):
Image to rescale.
scale (`int` or `float`):
Scale to apply to the image.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return rescale(image, scale=scale, data_format=data_format, **kwargs)
def normalize(
self,
image: np.ndarray,
mean: Union[float, List[float]],
std: Union[float, List[float]],
data_format: Optional[Union[str, ChannelDimension]] = None,
**kwargs,
) -> np.ndarray:
"""
Normalize an image. image = (image - image_mean) / image_std.
Args:
image (`np.ndarray`):
Image to normalize.
image_mean (`float` or `List[float]`):
Image mean.
image_std (`float` or `List[float]`):
Image standard deviation.
data_format (`str` or `ChannelDimension`, *optional*):
The channel dimension format of the image. If not provided, it will be the same as the input image.
"""
return normalize(image, mean=mean, std=std, data_format=data_format, **kwargs)
def preprocess(
self,
images: ImageInput,
do_resize: bool = None,
size: int = None,
keep_aspect_ratio: bool = None,
ensure_multiple_of: int = None,
resample: PILImageResampling = None,
do_rescale: bool = None,
rescale_factor: float = None,
do_normalize: bool = None,
image_mean: Optional[Union[float, List[float]]] = None,
image_std: Optional[Union[float, List[float]]] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
data_format: ChannelDimension = ChannelDimension.FIRST,
**kwargs,
) -> PIL.Image.Image:
"""
Preprocess an image or batch of images.
Args:
images (`ImageInput`):
Image to preprocess.
do_resize (`bool`, *optional*, defaults to `self.do_resize`):
Whether to resize the image.
size (`Dict[str, int]`, *optional*, defaults to `self.size`):
Size of the image after reszing. If `keep_aspect_ratio` is `True`, the image is resized to the largest
possible size such that the aspect ratio is preserved. If `ensure_multiple_of` is set, the image is
resized to a size that is a multiple of this value.
keep_aspect_ratio (`bool`, *optional*, defaults to `self.keep_aspect_ratio`):
Whether to keep the aspect ratio of the image. If False, the image will be resized to (size, size). If
True, the image will be resized to keep the aspect ratio and the size will be the maximum possible.
ensure_multiple_of (`int`, *optional*, defaults to `self.ensure_multiple_of`):
Ensure that the image size is a multiple of this value.
resample (`int`, *optional*, defaults to `self.resample`):
Resampling filter to use if resizing the image. This can be one of the enum `PILImageResampling`, Only
has an effect if `do_resize` is set to `True`.
do_rescale (`bool`, *optional*, defaults to `self.do_rescale`):
Whether to rescale the image values between [0 - 1].
rescale_factor (`float`, *optional*, defaults to `self.rescale_factor`):
Rescale factor to rescale the image by if `do_rescale` is set to `True`.
do_normalize (`bool`, *optional*, defaults to `self.do_normalize`):
Whether to normalize the image.
image_mean (`float` or `List[float]`, *optional*, defaults to `self.image_mean`):
Image mean.
image_std (`float` or `List[float]`, *optional*, defaults to `self.image_std`):
Image standard deviation.
return_tensors (`str` or `TensorType`, *optional*):
The type of tensors to return. Can be one of:
- Unset: Return a list of `np.ndarray`.
- `TensorType.TENSORFLOW` or `'tf'`: Return a batch of type `tf.Tensor`.
- `TensorType.PYTORCH` or `'pt'`: Return a batch of type `torch.Tensor`.
- `TensorType.NUMPY` or `'np'`: Return a batch of type `np.ndarray`.
- `TensorType.JAX` or `'jax'`: Return a batch of type `jax.numpy.ndarray`.
data_format (`ChannelDimension` or `str`, *optional*, defaults to `ChannelDimension.FIRST`):
The channel dimension format for the output image. Can be one of:
- `ChannelDimension.FIRST`: image in (num_channels, height, width) format.
- `ChannelDimension.LAST`: image in (height, width, num_channels) format.
"""
do_resize = do_resize if do_resize is not None else self.do_resize
size = size if size is not None else self.size
size = get_size_dict(size)
keep_aspect_ratio = keep_aspect_ratio if keep_aspect_ratio is not None else self.keep_aspect_ratio
ensure_multiple_of = ensure_multiple_of if ensure_multiple_of is not None else self.ensure_multiple_of
resample = resample if resample is not None else self.resample
do_rescale = do_rescale if do_rescale is not None else self.do_rescale
rescale_factor = rescale_factor if rescale_factor is not None else self.rescale_factor
do_normalize = do_normalize if do_normalize is not None else self.do_normalize
image_mean = image_mean if image_mean is not None else self.image_mean
image_std = image_std if image_std is not None else self.image_std
images = make_list_of_images(images)
if not valid_images(images):
raise ValueError(
"Invalid image type. Must be of type PIL.Image.Image, numpy.ndarray, "
"torch.Tensor, tf.Tensor or jax.ndarray."
)
if do_resize and size is None or resample is None:
raise ValueError("Size and resample must be specified if do_resize is True.")
if do_rescale and rescale_factor is None:
raise ValueError("Rescale factor must be specified if do_rescale is True.")
if do_normalize and (image_mean is None or image_std is None):
raise ValueError("Image mean and std must be specified if do_normalize is True.")
# All transformations expect numpy arrays.
images = [to_numpy_array(image) for image in images]
if do_resize:
images = [self.resize(image=image, size=size, resample=resample) for image in images]
if do_rescale:
images = [self.rescale(image=image, scale=rescale_factor) for image in images]
if do_normalize:
images = [self.normalize(image=image, mean=image_mean, std=image_std) for image in images]
images = [to_channel_dimension_format(image, data_format) for image in images]
data = {"pixel_values": images}
return BatchFeature(data=data, tensor_type=return_tensors)
def post_process_semantic_segmentation(self, outputs, target_sizes: List[Tuple] = None):
"""
Converts the output of [`DPTForSemanticSegmentation`] into semantic segmentation maps. Only supports PyTorch.
Args:
outputs ([`DPTForSemanticSegmentation`]):
Raw outputs of the model.
target_sizes (`List[Tuple]` of length `batch_size`, *optional*):
List of tuples corresponding to the requested final size (height, width) of each prediction. If unset,
predictions will not be resized.
Returns:
semantic_segmentation: `List[torch.Tensor]` of length `batch_size`, where each item is a semantic
segmentation map of shape (height, width) corresponding to the target_sizes entry (if `target_sizes` is
specified). Each entry of each `torch.Tensor` correspond to a semantic class id.
"""
# TODO: add support for other frameworks
logits = outputs.logits
# Resize logits and compute semantic segmentation maps
if target_sizes is not None:
if len(logits) != len(target_sizes):
raise ValueError(
"Make sure that you pass in as many target sizes as the batch dimension of the logits"
)
if is_torch_tensor(target_sizes):
target_sizes = target_sizes.numpy()
semantic_segmentation = []
for idx in range(len(logits)):
resized_logits = torch.nn.functional.interpolate(
logits[idx].unsqueeze(dim=0), size=target_sizes[idx], mode="bilinear", align_corners=False
)
semantic_map = resized_logits[0].argmax(dim=0)
semantic_segmentation.append(semantic_map)
else:
semantic_segmentation = logits.argmax(dim=1)
semantic_segmentation = [semantic_segmentation[i] for i in range(semantic_segmentation.shape[0])]
return semantic_segmentation
|
27182812/ChatGLM-LLaMA-chinese-insturct | 4,574 | src/transformers/models/big_bird/__init__.py | # Copyright 2021 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import (
OptionalDependencyNotAvailable,
_LazyModule,
is_flax_available,
is_sentencepiece_available,
is_tf_available,
is_tokenizers_available,
is_torch_available,
)
_import_structure = {
"configuration_big_bird": ["BIG_BIRD_PRETRAINED_CONFIG_ARCHIVE_MAP", "BigBirdConfig", "BigBirdOnnxConfig"],
}
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_big_bird"] = ["BigBirdTokenizer"]
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["tokenization_big_bird_fast"] = ["BigBirdTokenizerFast"]
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_big_bird"] = [
"BIG_BIRD_PRETRAINED_MODEL_ARCHIVE_LIST",
"BigBirdForCausalLM",
"BigBirdForMaskedLM",
"BigBirdForMultipleChoice",
"BigBirdForPreTraining",
"BigBirdForQuestionAnswering",
"BigBirdForSequenceClassification",
"BigBirdForTokenClassification",
"BigBirdLayer",
"BigBirdModel",
"BigBirdPreTrainedModel",
"load_tf_weights_in_big_bird",
]
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_flax_big_bird"] = [
"FlaxBigBirdForCausalLM",
"FlaxBigBirdForMaskedLM",
"FlaxBigBirdForMultipleChoice",
"FlaxBigBirdForPreTraining",
"FlaxBigBirdForQuestionAnswering",
"FlaxBigBirdForSequenceClassification",
"FlaxBigBirdForTokenClassification",
"FlaxBigBirdModel",
"FlaxBigBirdPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_big_bird import BIG_BIRD_PRETRAINED_CONFIG_ARCHIVE_MAP, BigBirdConfig, BigBirdOnnxConfig
try:
if not is_sentencepiece_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_big_bird import BigBirdTokenizer
try:
if not is_tokenizers_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .tokenization_big_bird_fast import BigBirdTokenizerFast
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_big_bird import (
BIG_BIRD_PRETRAINED_MODEL_ARCHIVE_LIST,
BigBirdForCausalLM,
BigBirdForMaskedLM,
BigBirdForMultipleChoice,
BigBirdForPreTraining,
BigBirdForQuestionAnswering,
BigBirdForSequenceClassification,
BigBirdForTokenClassification,
BigBirdLayer,
BigBirdModel,
BigBirdPreTrainedModel,
load_tf_weights_in_big_bird,
)
try:
if not is_flax_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_flax_big_bird import (
FlaxBigBirdForCausalLM,
FlaxBigBirdForMaskedLM,
FlaxBigBirdForMultipleChoice,
FlaxBigBirdForPreTraining,
FlaxBigBirdForQuestionAnswering,
FlaxBigBirdForSequenceClassification,
FlaxBigBirdForTokenClassification,
FlaxBigBirdModel,
FlaxBigBirdPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 11,353 | src/transformers/models/big_bird/tokenization_big_bird_fast.py | # coding=utf-8
# Copyright 2018 Google AI, Google Brain and the HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" Tokenization classes for Big Bird model."""
import os
from shutil import copyfile
from typing import List, Optional, Tuple
from ...tokenization_utils import AddedToken
from ...tokenization_utils_fast import PreTrainedTokenizerFast
from ...utils import is_sentencepiece_available, logging
if is_sentencepiece_available():
from .tokenization_big_bird import BigBirdTokenizer
else:
BigBirdTokenizer = None
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "spiece.model", "tokenizer_file": "tokenizer.json"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"google/bigbird-roberta-base": "https://huggingface.co/google/bigbird-roberta-base/resolve/main/spiece.model",
"google/bigbird-roberta-large": (
"https://huggingface.co/google/bigbird-roberta-large/resolve/main/spiece.model"
),
"google/bigbird-base-trivia-itc": (
"https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/spiece.model"
),
},
"tokenizer_file": {
"google/bigbird-roberta-base": (
"https://huggingface.co/google/bigbird-roberta-base/resolve/main/tokenizer.json"
),
"google/bigbird-roberta-large": (
"https://huggingface.co/google/bigbird-roberta-large/resolve/main/tokenizer.json"
),
"google/bigbird-base-trivia-itc": (
"https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/tokenizer.json"
),
},
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"google/bigbird-roberta-base": 4096,
"google/bigbird-roberta-large": 4096,
"google/bigbird-base-trivia-itc": 4096,
}
SPIECE_UNDERLINE = "▁"
class BigBirdTokenizerFast(PreTrainedTokenizerFast):
"""
Construct a "fast" BigBird tokenizer (backed by HuggingFace's *tokenizers* library). Based on
[Unigram](https://huggingface.co/docs/tokenizers/python/latest/components.html?highlight=unigram#models). This
tokenizer inherits from [`PreTrainedTokenizerFast`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods
Args:
vocab_file (`str`):
[SentencePiece](https://github.com/google/sentencepiece) file (generally has a *.spm* extension) that
contains the vocabulary necessary to instantiate a tokenizer.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The beginning of sequence token that was used during pretraining. Can be used a sequence classifier token.
<Tip>
When building a sequence using special tokens, this is not the token that is used for the beginning of
sequence. The token used is the `cls_token`.
</Tip>
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token. .. note:: When building a sequence using special tokens, this is not the token
that is used for the end of sequence. The token used is the `sep_token`.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
slow_tokenizer_class = BigBirdTokenizer
model_input_names = ["input_ids", "attention_mask"]
prefix_tokens: List[int] = []
def __init__(
self,
vocab_file=None,
tokenizer_file=None,
unk_token="<unk>",
bos_token="<s>",
eos_token="</s>",
pad_token="<pad>",
sep_token="[SEP]",
mask_token="[MASK]",
cls_token="[CLS]",
**kwargs,
):
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
super().__init__(
vocab_file,
tokenizer_file=tokenizer_file,
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
**kwargs,
)
self.vocab_file = vocab_file
self.can_save_slow_tokenizer = False if not self.vocab_file else True
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. An BigBird sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: list of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return cls + token_ids_0 + sep
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieves sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of ids.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Set to True if the token list is already formatted with special tokens for the model
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
if token_ids_1 is not None:
raise ValueError(
"You should not supply a second sequence if the provided sequence of "
"ids is already formatted with special tokens for the model."
)
return [1 if x in [self.sep_token_id, self.cls_token_id] else 0 for x in token_ids_0]
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Creates a mask from the two sequences passed to be used in a sequence-pair classification task. An ALBERT
sequence pair mask has the following format:
```
0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1
| first sequence | second sequence |
```
if token_ids_1 is None, only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of ids.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not self.can_save_slow_tokenizer:
raise ValueError(
"Your fast tokenizer does not have the necessary information to save the vocabulary for a slow "
"tokenizer."
)
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file):
copyfile(self.vocab_file, out_vocab_file)
return (out_vocab_file,)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 142,078 | src/transformers/models/big_bird/modeling_big_bird.py | # coding=utf-8
# Copyright 2021 Google Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" PyTorch BigBird model."""
import math
import os
from dataclasses import dataclass
from typing import Optional, Tuple, Union
import numpy as np
import torch
import torch.utils.checkpoint
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss
from ...activations import ACT2FN
from ...modeling_outputs import (
BaseModelOutputWithPastAndCrossAttentions,
BaseModelOutputWithPoolingAndCrossAttentions,
CausalLMOutputWithCrossAttentions,
MaskedLMOutput,
MultipleChoiceModelOutput,
SequenceClassifierOutput,
TokenClassifierOutput,
)
from ...modeling_utils import PreTrainedModel
from ...pytorch_utils import apply_chunking_to_forward, torch_int_div
from ...utils import (
ModelOutput,
add_code_sample_docstrings,
add_start_docstrings,
add_start_docstrings_to_model_forward,
logging,
replace_return_docstrings,
)
from .configuration_big_bird import BigBirdConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/bigbird-roberta-base"
_CONFIG_FOR_DOC = "BigBirdConfig"
BIG_BIRD_PRETRAINED_MODEL_ARCHIVE_LIST = [
"google/bigbird-roberta-base",
"google/bigbird-roberta-large",
"google/bigbird-base-trivia-itc",
# See all BigBird models at https://huggingface.co/models?filter=big_bird
]
_TRIVIA_QA_MAPPING = {
"big_bird_attention": "attention/self",
"output_layer_norm": "output/LayerNorm",
"attention_output": "attention/output/dense",
"output": "output/dense",
"self_attention_layer_norm": "attention/output/LayerNorm",
"intermediate": "intermediate/dense",
"word_embeddings": "bert/embeddings/word_embeddings",
"position_embedding": "bert/embeddings/position_embeddings",
"type_embeddings": "bert/embeddings/token_type_embeddings",
"embeddings": "bert/embeddings",
"layer_normalization": "output/LayerNorm",
"layer_norm": "LayerNorm",
"trivia_qa_head": "qa_classifier",
"dense": "intermediate/dense",
"dense_1": "qa_outputs",
}
def load_tf_weights_in_big_bird(model, tf_checkpoint_path, is_trivia_qa=False):
"""Load tf checkpoints in a pytorch model."""
def load_tf_weights_bert(init_vars, tf_path):
names = []
tf_weights = {}
for name, shape in init_vars:
array = tf.train.load_variable(tf_path, name)
name = name.replace("bert/encoder/LayerNorm", "bert/embeddings/LayerNorm")
logger.info(f"Loading TF weight {name} with shape {shape}")
names.append(name)
tf_weights[name] = array
return names, tf_weights
def load_tf_weights_trivia_qa(init_vars):
names = []
tf_weights = {}
for i, var in enumerate(init_vars):
name_items = var.name.split("/")
if "transformer_scaffold" in name_items[0]:
layer_name_items = name_items[0].split("_")
if len(layer_name_items) < 3:
layer_name_items += [0]
name_items[0] = f"bert/encoder/layer_{layer_name_items[2]}"
name = "/".join([_TRIVIA_QA_MAPPING[x] if x in _TRIVIA_QA_MAPPING else x for x in name_items])[
:-2
] # remove last :0 in variable
if "self/attention/output" in name:
name = name.replace("self/attention/output", "output")
if i >= len(init_vars) - 2:
name = name.replace("intermediate", "output")
logger.info(f"Loading TF weight {name} with shape {var.shape}")
array = var.value().numpy()
names.append(name)
tf_weights[name] = array
return names, tf_weights
try:
import re
import numpy as np
import tensorflow as tf
except ImportError:
logger.error(
"Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
"https://www.tensorflow.org/install/ for installation instructions."
)
raise
tf_path = os.path.abspath(tf_checkpoint_path)
logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
# Load weights from TF model
init_vars = tf.saved_model.load(tf_path).variables if is_trivia_qa else tf.train.list_variables(tf_path)
if len(init_vars) <= 0:
raise ValueError("Loaded trained variables cannot be empty.")
pt_names = list(model.state_dict().keys())
if is_trivia_qa:
names, tf_weights = load_tf_weights_trivia_qa(init_vars)
else:
names, tf_weights = load_tf_weights_bert(init_vars, tf_path)
for txt_name in names:
array = tf_weights[txt_name]
name = txt_name.split("/")
# adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
# which are not required for using pretrained model
if any(
n in ["adam_v", "adam_m", "AdamWeightDecayOptimizer", "AdamWeightDecayOptimizer_1", "global_step"]
for n in name
):
logger.info(f"Skipping {'/'.join(name)}")
continue
pointer = model
pt_name = []
for m_name in name:
if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
scope_names = re.split(r"_(\d+)", m_name)
else:
scope_names = [m_name]
if scope_names[0] == "kernel" or scope_names[0] == "gamma":
pointer = getattr(pointer, "weight")
pt_name.append("weight")
elif scope_names[0] == "output_bias" or scope_names[0] == "beta":
pointer = getattr(pointer, "bias")
pt_name.append("bias")
elif scope_names[0] == "output_weights":
pointer = getattr(pointer, "weight")
pt_name.append("weight")
elif scope_names[0] == "squad":
pointer = getattr(pointer, "classifier")
pt_name.append("classifier")
elif scope_names[0] == "transform":
pointer = getattr(pointer, "transform")
pt_name.append("transform")
if ("bias" in name) or ("kernel" in name):
pointer = getattr(pointer, "dense")
pt_name.append("dense")
elif ("beta" in name) or ("gamma" in name):
pointer = getattr(pointer, "LayerNorm")
pt_name.append("LayerNorm")
else:
try:
pointer = getattr(pointer, scope_names[0])
pt_name.append(f"{scope_names[0]}")
except AttributeError:
logger.info(f"Skipping {m_name}")
continue
if len(scope_names) >= 2:
num = int(scope_names[1])
pointer = pointer[num]
pt_name.append(f"{num}")
if m_name[-11:] == "_embeddings" or m_name == "embeddings":
pointer = getattr(pointer, "weight")
pt_name.append("weight")
elif m_name == "kernel":
array = np.transpose(array)
try:
if len(array.shape) > len(pointer.shape) and math.prod(array.shape) == math.prod(pointer.shape):
# print(txt_name, array.shape)
if (
txt_name.endswith("attention/self/key/kernel")
or txt_name.endswith("attention/self/query/kernel")
or txt_name.endswith("attention/self/value/kernel")
):
array = array.transpose(1, 0, 2).reshape(pointer.shape)
elif txt_name.endswith("attention/output/dense/kernel"):
array = array.transpose(0, 2, 1).reshape(pointer.shape)
else:
array = array.reshape(pointer.shape)
if pointer.shape != array.shape:
raise ValueError(
f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched of {txt_name}."
)
except AssertionError as e:
e.args += (pointer.shape, array.shape)
raise
pt_weight_name = ".".join(pt_name)
logger.info(f"Initialize PyTorch weight {pt_weight_name} from {txt_name}.")
pointer.data = torch.from_numpy(array)
tf_weights.pop(txt_name, None)
pt_names.remove(pt_weight_name)
logger.info(f"Weights not copied to PyTorch model: {', '.join(tf_weights.keys())}.")
logger.info(f"Weights not initialized in PyTorch model: {', '.join(pt_names)}.")
return model
class BigBirdEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
# Copied from transformers.models.bert.modeling_bert.BertEmbeddings.__init__
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer("position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)))
self.register_buffer(
"token_type_ids", torch.zeros(self.position_ids.size(), dtype=torch.long), persistent=False
)
# End copy
self.rescale_embeddings = config.rescale_embeddings
self.hidden_size = config.hidden_size
def forward(
self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
if position_ids is None:
position_ids = self.position_ids[:, past_key_values_length : seq_length + past_key_values_length]
# Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
# when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
# issue #5664
if token_type_ids is None:
if hasattr(self, "token_type_ids"):
buffered_token_type_ids = self.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
if self.rescale_embeddings:
inputs_embeds = inputs_embeds * (self.hidden_size**0.5)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.dropout(embeddings)
embeddings = self.LayerNorm(embeddings)
return embeddings
class BigBirdSelfAttention(nn.Module):
def __init__(self, config):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
):
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in BigBirdModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
class BigBirdBlockSparseAttention(nn.Module):
def __init__(self, config, seed=None):
super().__init__()
self.max_seqlen = config.max_position_embeddings
self.seed = seed
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size {config.hidden_size} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.num_random_blocks = config.num_random_blocks
self.block_size = config.block_size
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
self.value = nn.Linear(config.hidden_size, self.all_head_size, bias=config.use_bias)
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states,
band_mask=None,
from_mask=None,
to_mask=None,
from_blocked_mask=None,
to_blocked_mask=None,
output_attentions=None,
):
# Currently this `class` can't be used in decoder.
batch_size, seqlen, _ = hidden_states.size()
to_seq_length = from_seq_length = seqlen
from_block_size = to_block_size = self.block_size
if from_seq_length % from_block_size != 0:
raise ValueError("Query sided sequence length must be multiple of block size")
if to_seq_length % to_block_size != 0:
raise ValueError("Key/Value sided sequence length must be multiple of block size")
query_layer = self.transpose_for_scores(self.query(hidden_states))
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
context_layer, attention_probs = self.bigbird_block_sparse_attention(
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
from_blocked_mask,
to_blocked_mask,
self.num_attention_heads,
self.num_random_blocks,
self.attention_head_size,
from_block_size,
to_block_size,
batch_size,
from_seq_length,
to_seq_length,
seed=self.seed,
plan_from_length=None,
plan_num_rand_blocks=None,
output_attentions=output_attentions,
)
context_layer = context_layer.contiguous().view(batch_size, from_seq_length, -1)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
@staticmethod
def torch_bmm_nd(inp_1, inp_2, ndim=None):
"""Fast nd matrix multiplication"""
# faster replacement of torch.einsum ("bhqk,bhkd->bhqd")
return torch.bmm(inp_1.reshape((-1,) + inp_1.shape[-2:]), inp_2.reshape((-1,) + inp_2.shape[-2:])).view(
inp_1.shape[: ndim - 2] + (inp_1.shape[ndim - 2], inp_2.shape[ndim - 1])
)
@staticmethod
def torch_bmm_nd_transpose(inp_1, inp_2, ndim=None):
"""Fast nd matrix multiplication with transpose"""
# faster replacement of torch.einsum (bhqd,bhkd->bhqk)
return torch.bmm(
inp_1.reshape((-1,) + inp_1.shape[-2:]), inp_2.reshape((-1,) + inp_2.shape[-2:]).transpose(1, 2)
).view(inp_1.shape[: ndim - 2] + (inp_1.shape[ndim - 2], inp_2.shape[ndim - 2]))
def bigbird_block_sparse_attention(
self,
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
from_blocked_mask,
to_blocked_mask,
n_heads,
n_rand_blocks,
attention_head_size,
from_block_size,
to_block_size,
batch_size,
from_seq_len,
to_seq_len,
seed,
plan_from_length,
plan_num_rand_blocks,
output_attentions,
):
# BigBird block-sparse attention as suggested in paper
# ITC:
# global tokens: 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# ETC:
# global tokens: extra_globals_tokens + 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# Note:
# 1) Currently, ETC is not supported.
# 2) Window size is fixed to 3 blocks & it can be changed only by
# changing `block_size`.
# 3) Number of global blocks are fixed (2 blocks here) & global tokens can be
# controlled only by `block_size`.
# attention is calculated separately for q[0], q[1], q[2:-2], q[-2], q[-1] in order to use special trick of shifting tokens (for calculating sliding attention)
# hence following code can be divided into 5 parts.
if from_seq_len // from_block_size != to_seq_len // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
rsqrt_d = 1 / math.sqrt(attention_head_size)
bsz = batch_size
attn_mask_penalty = -10000.0
# generate random attention and corresponding masks
np.random.seed(seed)
if from_seq_len in [1024, 3072, 4096]: # old plans used in paper
rand_attn = [
self._bigbird_block_rand_mask(
self.max_seqlen, self.max_seqlen, from_block_size, to_block_size, n_rand_blocks, last_idx=1024
)[: (from_seq_len // from_block_size - 2)]
for _ in range(n_heads)
]
else:
if plan_from_length is None:
plan_from_length, plan_num_rand_blocks = self._get_rand_attn_plan(
from_seq_len, from_block_size, n_rand_blocks
)
rand_attn = self._bigbird_block_rand_mask_with_head(
from_seq_length=from_seq_len,
to_seq_length=to_seq_len,
from_block_size=from_block_size,
to_block_size=to_block_size,
num_heads=n_heads,
plan_from_length=plan_from_length,
plan_num_rand_blocks=plan_num_rand_blocks,
)
rand_attn = np.stack(rand_attn, axis=0)
rand_attn = torch.tensor(rand_attn, device=query_layer.device, dtype=torch.long)
rand_attn.unsqueeze_(0)
rand_attn = torch.cat([rand_attn for _ in range(batch_size)], dim=0)
rand_mask = self._create_rand_mask_from_inputs(
from_blocked_mask, to_blocked_mask, rand_attn, n_heads, n_rand_blocks, bsz, from_seq_len, from_block_size
)
blocked_query_matrix = query_layer.view(bsz, n_heads, from_seq_len // from_block_size, from_block_size, -1)
blocked_key_matrix = key_layer.view(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
blocked_value_matrix = value_layer.view(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
# preparing block for randn attn
gathered_key = self.torch_gather_b2(blocked_key_matrix, rand_attn)
gathered_key = gathered_key.view(
bsz, n_heads, to_seq_len // to_block_size - 2, n_rand_blocks * to_block_size, -1
) # [bsz, n_heads, to_seq_len//to_block_size-2, n_rand_blocks, to_block_size, -1]
gathered_value = self.torch_gather_b2(blocked_value_matrix, rand_attn)
gathered_value = gathered_value.view(
bsz, n_heads, to_seq_len // to_block_size - 2, n_rand_blocks * to_block_size, -1
) # [bsz, n_heads, to_seq_len//to_block_size-2, n_rand_blocks, to_block_size, -1]
# 1st PART
# 1st block (global block) attention scores
# q[0] x (k[0], k[1], k[2], k[3], k[4] .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
first_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, 0], key_layer, ndim=4)
first_product = first_product * rsqrt_d
first_product += (1.0 - to_mask) * attn_mask_penalty
first_attn_weights = nn.functional.softmax(
first_product, dim=-1
) # [bsz, n_heads, from_block_size, to_seq_len]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
first_context_layer = self.torch_bmm_nd(first_attn_weights, value_layer, ndim=4)
first_context_layer.unsqueeze_(2)
# 2nd PART
# 2nd block attention scores
# q[1] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> 2nd, 3rd blocks
# global key blocks -> 1st block
second_key_mat = torch.cat(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, 1],
blocked_key_matrix[:, :, 2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, 0],
],
dim=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
second_value_mat = torch.cat(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, 1],
blocked_value_matrix[:, :, 2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, 0],
],
dim=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, 1], second_key_mat, ndim=4)
second_seq_pad = torch.cat(
[
to_mask[:, :, :, : 3 * to_block_size],
to_mask[:, :, :, -to_block_size:],
to_mask.new_ones([bsz, 1, 1, n_rand_blocks * to_block_size]),
],
dim=3,
)
second_rand_pad = torch.cat(
[
rand_mask.new_ones([bsz, n_heads, from_block_size, 4 * to_block_size]),
rand_mask[:, :, 0],
],
dim=3,
)
second_product = second_product * rsqrt_d
second_product += (1.0 - torch.minimum(second_seq_pad, second_rand_pad)) * attn_mask_penalty
second_attn_weights = nn.functional.softmax(
second_product, dim=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, -1]
second_context_layer = self.torch_bmm_nd(second_attn_weights, second_value_mat, ndim=4)
second_context_layer.unsqueeze_(2)
# 3rd PART
# Middle blocks attention scores
# q[-2:2] x (sliding_keys, random_keys, global_keys)
# sliding attn is calculated using special trick of shifting tokens as discussed in paper
# random keys are generated by taking random indices as per `rand_attn`
# global keys -> 1st & last block
exp_blocked_key_matrix = torch.cat(
[blocked_key_matrix[:, :, 1:-3], blocked_key_matrix[:, :, 2:-2], blocked_key_matrix[:, :, 3:-1]], dim=3
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
exp_blocked_value_matrix = torch.cat(
[blocked_value_matrix[:, :, 1:-3], blocked_value_matrix[:, :, 2:-2], blocked_value_matrix[:, :, 3:-1]],
dim=3,
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
middle_query_matrix = blocked_query_matrix[:, :, 2:-2]
# sliding attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [b, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
inner_band_product = self.torch_bmm_nd_transpose(middle_query_matrix, exp_blocked_key_matrix, ndim=5)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, 3*to_block_size]
inner_band_product = inner_band_product * rsqrt_d
# randn attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
rand_band_product = self.torch_bmm_nd_transpose(middle_query_matrix, gathered_key[:, :, 1:-1], ndim=5)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size]
rand_band_product = rand_band_product * rsqrt_d
# Including 1st block (since it's global)
first_band_product = torch.einsum(
"bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, 0]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
first_band_product = first_band_product * rsqrt_d
# Including last block (since it's global)
last_band_product = torch.einsum(
"bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, -1]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
last_band_product = last_band_product * rsqrt_d
# masking padded tokens
inner_band_product += (1.0 - band_mask) * attn_mask_penalty
first_band_product += (1.0 - to_mask[:, :, :, :to_block_size].unsqueeze(3)) * attn_mask_penalty
last_band_product += (1.0 - to_mask[:, :, :, -to_block_size:].unsqueeze(3)) * attn_mask_penalty
rand_band_product += (1.0 - rand_mask[:, :, 1:-1]) * attn_mask_penalty
# completing attention scores matrix for all q[-2:2]
band_product = torch.cat(
[first_band_product, inner_band_product, rand_band_product, last_band_product], dim=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# safely doing softmax since attention matrix is completed
attn_weights = nn.functional.softmax(
band_product, dim=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# contribution of sliding keys
# [bsz, n_heads, m//from_block_size-4, from_block_size, 3*to_block_size] x [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
context_layer = self.torch_bmm_nd(
attn_weights[:, :, :, :, to_block_size : 4 * to_block_size], exp_blocked_value_matrix, ndim=5
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of random keys
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size] x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
context_layer += self.torch_bmm_nd(
attn_weights[:, :, :, :, 4 * to_block_size : -to_block_size], gathered_value[:, :, 1:-1], ndim=5
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of global keys
context_layer += torch.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, :to_block_size], blocked_value_matrix[:, :, 0]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
context_layer += torch.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, -to_block_size:], blocked_value_matrix[:, :, -1]
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1] ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# 4th PART
# last 2nd token attention scores
# q[-2] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> last 3 blocks
# global key block -> 1st block
# random key block -> based on indices stored in `randn_attn`
second_last_key_mat = torch.cat(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, -3],
blocked_key_matrix[:, :, -2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, -1],
],
dim=2,
) # [bsz, n_heads, (4+n_random_blocks)*to_block_size, -1]
second_last_value_mat = torch.cat(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, -3],
blocked_value_matrix[:, :, -2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, -1],
],
dim=2,
) # [bsz, n_heads, (4+r)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_last_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, -2], second_last_key_mat, ndim=4)
second_last_seq_pad = torch.cat(
[
to_mask[:, :, :, :to_block_size],
to_mask[:, :, :, -3 * to_block_size :],
to_mask.new_ones([bsz, 1, 1, n_rand_blocks * to_block_size]),
],
dim=3,
)
second_last_rand_pad = torch.cat(
[
rand_mask.new_ones([bsz, n_heads, from_block_size, 4 * to_block_size]),
rand_mask[:, :, -1],
],
dim=3,
)
second_last_product = second_last_product * rsqrt_d
second_last_product += (1.0 - torch.minimum(second_last_seq_pad, second_last_rand_pad)) * attn_mask_penalty
second_last_attn_weights = nn.functional.softmax(
second_last_product, dim=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1] ==> [bsz, n_heads, from_block_size, -1]
second_last_context_layer = self.torch_bmm_nd(second_last_attn_weights, second_last_value_mat, ndim=4)
second_last_context_layer.unsqueeze_(2)
# 5th PART
# last block (global) attention scores
# q[-1] x (k[0], k[1], k[2], k[3], .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
last_product = self.torch_bmm_nd_transpose(blocked_query_matrix[:, :, -1], key_layer, ndim=4)
last_product = last_product * rsqrt_d
last_product += (1.0 - to_mask) * attn_mask_penalty
last_attn_weights = nn.functional.softmax(last_product, dim=-1) # [bsz, n_heads, from_block_size, n]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
last_context_layer = self.torch_bmm_nd(last_attn_weights, value_layer, ndim=4)
last_context_layer.unsqueeze_(2)
# combining representations of all tokens
context_layer = torch.cat(
[first_context_layer, second_context_layer, context_layer, second_last_context_layer, last_context_layer],
dim=2,
)
context_layer = context_layer.view((bsz, n_heads, from_seq_len, -1)) * from_mask
context_layer = torch.transpose(context_layer, 1, 2)
# this is just for visualizing; forward pass doesn't depend on following code
if output_attentions:
# TODO(PVP): need to verify if below code is correct
attention_probs = torch.zeros(
bsz, n_heads, from_seq_len, to_seq_len, dtype=torch.float, device=context_layer.device
)
# 1st query block
# corresponding to `first_context_layer`
attention_probs[:, :, :from_block_size, :] = first_attn_weights # all keys global
# 2nd query block
# corresponding to `second_context_layer`
attention_probs[:, :, from_block_size : 2 * from_block_size, : 3 * to_block_size] = second_attn_weights[
:, :, :, : 3 * to_block_size
] # 1st three key blocks (global + sliding)
attention_probs[:, :, from_block_size : 2 * from_block_size, -to_block_size:] = second_attn_weights[
:, :, :, 3 * to_block_size : 4 * to_block_size
] # last key block (global)
# random keys
for p1, i1, w1 in zip(range(bsz), rand_attn, second_attn_weights):
# p1, i1, w1 corresponds to batch_dim i.e. following operation is done for each sequence in batch
for p2, i2, w2 in zip(range(n_heads), i1, w1):
# p2, i2, w2 corresponds to head_dim i.e. following operation is done for each heads
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)
right_slice = w2[:, 4 * to_block_size :]
attn_probs_view[p1, p2, 1, :, i2[0]] = right_slice.view(
from_block_size, n_rand_blocks, to_block_size
)
# Middle query blocks
# corresponding to `context_layer`
# sliding keys
for q_idx in range(from_seq_len // from_block_size - 4):
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)[:, :, 2:-2, :, 1:-1, :]
right_slice = attn_weights[:, :, q_idx, :, to_block_size : 4 * to_block_size]
attn_probs_view[:, :, q_idx, :, q_idx : q_idx + 3, :] = right_slice.view(
bsz, n_heads, from_block_size, 3, to_block_size
) # inner_band_product
# global keys (corresponding to 1st key block)
attention_probs[:, :, 2 * from_block_size : -2 * from_block_size, :to_block_size] = attn_weights[
:, :, :, :, :to_block_size
].view(
bsz, n_heads, -1, to_block_size
) # first_band_product
# global keys (corresponding to last key block)
attention_probs[:, :, 2 * from_block_size : -2 * from_block_size, -to_block_size:] = attn_weights[
:, :, :, :, -to_block_size:
].view(
bsz, n_heads, -1, to_block_size
) # last_band_product
# random keys
for p1, i1, w1 in zip(range(bsz), rand_attn, attn_weights):
# p1, i1, w1 corresponds to batch_dim i.e. following operation is done for each sequence in batch
for p2, i2, w2 in zip(range(n_heads), i1, w1):
# p2, i2, w2 corresponds to head_dim i.e. following operation is done for each heads
for q_idx in range(1, len(i2) - 1):
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)
right_slice = w2[q_idx - 1, :, 4 * to_block_size : -to_block_size]
attn_probs_view[p1, p2, q_idx + 1, :, i2[q_idx]] = right_slice.view(
from_block_size, n_rand_blocks, to_block_size
)
# Second-last query block
# corresponding to `second_last_context_layer`
attention_probs[:, :, -2 * from_block_size : -from_block_size, :to_block_size] = second_last_attn_weights[
:, :, :, :to_block_size
] # 1st key block (global)
attention_probs[
:, :, -2 * from_block_size : -from_block_size, -3 * to_block_size :
] = second_last_attn_weights[
:, :, :, to_block_size : 4 * to_block_size
] # last three blocks (global + sliding)
# random keys
for p1, i1, w1 in zip(range(bsz), rand_attn, second_last_attn_weights):
# p1, i1, w1 corresponds to batch_dim i.e. following operation is done for each sequence in batch
for p2, i2, w2 in zip(range(n_heads), i1, w1):
# p2, i2, w2 corresponds to head_dim i.e. following operation is done for each heads
attn_probs_view = attention_probs.view(
bsz,
n_heads,
from_seq_len // from_block_size,
from_block_size,
to_seq_len // to_block_size,
to_block_size,
)
right_slice = w2[:, 4 * to_block_size :]
attn_probs_view[p1, p2, -2, :, i2[-1]] = right_slice.view(
from_block_size, n_rand_blocks, to_block_size
)
# last query block
# corresponding to `last_context_layer`
attention_probs[:, :, -from_block_size:, :] = last_attn_weights # all keys global
else:
attention_probs = None
return context_layer, attention_probs
@staticmethod
def torch_gather_b2(params, indices):
# this operation is equivalent to tf.gather when batch_dims=2
if params.shape[:2] != indices.shape[:2]:
raise ValueError(
"Make sure that the first two dimensions of params and indices are identical, but"
f" they are params: {params.shape[:2]} vs. indices: {indices.shape[:2]}"
)
num_indices_to_gather = indices.shape[-2] * indices.shape[-1]
num_indices_to_pick_from = params.shape[2]
shift = torch.arange(indices.shape[0] * indices.shape[1] * num_indices_to_gather, device=indices.device)
indices_shift = torch_int_div(shift, num_indices_to_gather) * num_indices_to_pick_from
flattened_indices = indices.view(-1) + indices_shift
flattened_params = params.reshape(-1, params.shape[-2], params.shape[-1])
out_flattened = flattened_params.index_select(0, flattened_indices)
out = out_flattened.reshape(params.shape[:2] + (num_indices_to_gather,) + params.shape[3:])
return out
@staticmethod
def _create_rand_mask_from_inputs(
from_blocked_mask,
to_blocked_mask,
rand_attn,
num_attention_heads,
num_rand_blocks,
batch_size,
from_seq_length,
from_block_size,
):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size,
from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size,
to_seq_length//to_block_size, to_block_size].
rand_attn: [batch_size, num_attention_heads,
from_seq_length//from_block_size-2, num_rand_blocks]
num_attention_heads: int. Number of attention heads.
num_rand_blocks: int. Number of random chunks per row.
batch_size: int. Batch size for computation.
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
Returns:
float Tensor of shape [batch_size, num_attention_heads, from_seq_length//from_block_size-2,
from_block_size, num_rand_blocks*to_block_size].
"""
num_windows = from_seq_length // from_block_size - 2
rand_mask = torch.stack([p1[i1.flatten()] for p1, i1 in zip(to_blocked_mask, rand_attn)])
rand_mask = rand_mask.view(batch_size, num_attention_heads, num_windows, num_rand_blocks * from_block_size)
rand_mask = torch.einsum("blq,bhlk->bhlqk", from_blocked_mask[:, 1:-1], rand_mask)
return rand_mask
@staticmethod
def _get_rand_attn_plan(from_seq_length, from_block_size, num_rand_blocks):
"""
Gives the plan of where to put random attention.
Args:
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
num_rand_blocks: int. Number of random chunks per row.
Returns:
plan_from_length: ending location of from block plan_num_rand_blocks: number of random ending location for
each block
"""
plan_from_length = []
plan_num_rand_blocks = []
if (2 * num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((2 * num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(0)
elif (num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks // 2)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks - (num_rand_blocks // 2))
else:
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks)
return plan_from_length, plan_num_rand_blocks
@staticmethod
def _bigbird_block_rand_mask(
from_seq_length, to_seq_length, from_block_size, to_block_size, num_rand_blocks, last_idx=-1
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_rand_blocks: int. Number of random chunks per row.
last_idx: if -1 then num_rand_blocks blocks chosen anywhere in to sequence,
if positive then num_rand_blocks blocks chosen only up to last_idx.
Returns:
adjacency list of size from_seq_length//from_block_size-2 by num_rand_blocks
"""
# using this method when from_seq_length in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
rand_attn = np.zeros((from_seq_length // from_block_size - 2, num_rand_blocks), dtype=np.int32)
middle_seq = np.arange(1, to_seq_length // to_block_size - 1, dtype=np.int32)
last = to_seq_length // to_block_size - 1
if last_idx > (2 * to_block_size):
last = (last_idx // to_block_size) - 1
r = num_rand_blocks # shorthand
for i in range(1, from_seq_length // from_block_size - 1):
start = i - 2
end = i
if i == 1:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[2:last])[:r]
elif i == 2:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[3:last])[:r]
elif i == from_seq_length // from_block_size - 3:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:last])[:r]
# Missing -3: should have been sliced till last-3
elif i == from_seq_length // from_block_size - 2:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:last])[:r]
# Missing -4: should have been sliced till last-4
else:
if start > last:
start = last
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:start])[:r]
elif (end + 1) == last:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:start])[:r]
else:
rand_attn[i - 1, :] = np.random.permutation(
np.concatenate((middle_seq[:start], middle_seq[end + 1 : last]))
)[:r]
return rand_attn
def _bigbird_block_rand_mask_with_head(
self,
from_seq_length,
to_seq_length,
from_block_size,
to_block_size,
num_heads,
plan_from_length,
plan_num_rand_blocks,
window_block_left=1,
window_block_right=1,
global_block_top=1,
global_block_bottom=1,
global_block_left=1,
global_block_right=1,
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_heads: int. total number of heads.
plan_from_length: list. plan from length where num_random_blocks are chosen from.
plan_num_rand_blocks: list. number of rand blocks within the plan.
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_top: int. number of blocks at the top.
global_block_bottom: int. number of blocks at the bottom.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
adjacency list of size num_head where each element is of size from_seq_length//from_block_size-2 by
num_rand_blocks
"""
# using this method when from_seq_length not in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
if from_seq_length not in plan_from_length:
raise ValueError("Error from sequence length not in plan!")
# Total number of blocks in the mmask
num_blocks = from_seq_length // from_block_size
# Number of blocks per plan
plan_block_length = np.array(plan_from_length) // from_block_size
# till when to follow plan
max_plan_idx = plan_from_length.index(from_seq_length)
# Random Attention adjacency list
rand_attn = [
np.zeros((num_blocks, np.sum(plan_num_rand_blocks[: max_plan_idx + 1])), dtype=np.int32)
for i in range(num_heads)
]
# We will go iteratively over the plan blocks and pick random number of
# Attention blocks from the legally allowed blocks
for plan_idx in range(max_plan_idx + 1):
rnd_r_cnt = 0
if plan_idx > 0:
# set the row for all from_blocks starting from 0 to
# plan_block_length[plan_idx-1]
# column indx start fromm plan_block_length[plan_idx-1] and ends at
# plan_block_length[plan_idx]
if plan_num_rand_blocks[plan_idx] > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:plan_idx]))
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: plan_idx + 1]))
for blk_rw_idx in range(global_block_top, plan_block_length[plan_idx - 1]):
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=plan_block_length[plan_idx - 1],
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
for pl_id in range(plan_idx):
if plan_num_rand_blocks[pl_id] == 0:
continue
for blk_rw_idx in range(plan_block_length[plan_idx - 1], plan_block_length[plan_idx]):
rnd_r_cnt = 0
to_start_block_id = 0
if pl_id > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:pl_id]))
to_start_block_id = plan_block_length[pl_id - 1]
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: pl_id + 1]))
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[pl_id],
num_rand_blocks=plan_num_rand_blocks[pl_id],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
if plan_num_rand_blocks[plan_idx] == 0:
continue
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: plan_idx + 1]))
from_start_block_id = global_block_top
to_start_block_id = 0
if plan_idx > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:plan_idx]))
from_start_block_id = plan_block_length[plan_idx - 1]
to_start_block_id = plan_block_length[plan_idx - 1]
for blk_rw_idx in range(from_start_block_id, plan_block_length[plan_idx]):
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
for nh in range(num_heads):
rand_attn[nh] = rand_attn[nh][global_block_top : num_blocks - global_block_bottom, :]
return rand_attn
@staticmethod
def _get_single_block_row_attention(
block_id,
to_start_block_id,
to_end_block_id,
num_rand_blocks,
window_block_left=1,
window_block_right=1,
global_block_left=1,
global_block_right=1,
):
"""
For a single row block get random row attention.
Args:
block_id: int. block id of row.
to_start_block_id: int. random attention column start id.
to_end_block_id: int. random attention column end id.
num_rand_blocks: int. number of random blocks to be selected.
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
row containing the random attention vector of size num_rand_blocks.
"""
# list of to_blocks from which to choose random attention
to_block_list = np.arange(to_start_block_id, to_end_block_id, dtype=np.int32)
# permute the blocks
perm_block = np.random.permutation(to_block_list)
# illegal blocks for the current block id, using window
illegal_blocks = list(range(block_id - window_block_left, block_id + window_block_right + 1))
# Add blocks at the start and at the end
illegal_blocks.extend(list(range(global_block_left)))
illegal_blocks.extend(list(range(to_end_block_id - global_block_right, to_end_block_id)))
# The second from_block cannot choose random attention on second last to_block
if block_id == 1:
illegal_blocks.append(to_end_block_id - 2)
# The second last from_block cannot choose random attention on second to_block
if block_id == to_end_block_id - 2:
illegal_blocks.append(1)
selected_random_blokcs = []
for i in range(to_end_block_id - to_start_block_id):
if perm_block[i] not in illegal_blocks:
selected_random_blokcs.append(perm_block[i])
if len(selected_random_blokcs) == num_rand_blocks:
break
return np.array(selected_random_blokcs, dtype=np.int32)
# Copied from transformers.models.bert.modeling_bert.BertSelfOutput with Bert->BigBird
class BigBirdSelfOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class BigBirdAttention(nn.Module):
def __init__(self, config, seed=None):
super().__init__()
self.attention_type = config.attention_type
self.config = config
self.seed = seed
if self.config.attention_type == "original_full":
self.self = BigBirdSelfAttention(config)
elif self.config.attention_type == "block_sparse":
self.self = BigBirdBlockSparseAttention(config, seed)
else:
raise ValueError(
f"attention_type can either be original_full or block_sparse, but is {self.config.attention_type}"
)
self.output = BigBirdSelfOutput(config)
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
if value == "original_full":
# copy all weights to new full attention class
attn_weights = BigBirdSelfAttention(self.config)
else:
# copy all weights to new sparse attention class
attn_weights = BigBirdBlockSparseAttention(self.config, self.seed)
attn_weights.query = self.self.query
attn_weights.value = self.self.value
attn_weights.key = self.self.key
self.self = attn_weights
self.attention_type = value
if not self.training:
self.self.eval()
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=None,
output_attentions=False,
# block_sparse config
band_mask=None,
from_mask=None,
to_mask=None,
from_blocked_mask=None,
to_blocked_mask=None,
):
# fp16 compatibility
if band_mask is not None:
band_mask = band_mask.to(hidden_states.dtype)
if from_mask is not None:
from_mask = from_mask.to(hidden_states.dtype)
if to_mask is not None:
to_mask = to_mask.to(hidden_states.dtype)
if self.attention_type == "original_full":
self_outputs = self.self(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
past_key_value,
output_attentions,
)
else:
if encoder_hidden_states is not None:
raise ValueError("BigBird cannot be used as a decoder when config.attention_type != 'original_full'")
self_outputs = self.self(
hidden_states, band_mask, from_mask, to_mask, from_blocked_mask, to_blocked_mask, output_attentions
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
# Copied from transformers.models.bert.modeling_bert.BertIntermediate with Bert->BigBird
class BigBirdIntermediate(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOutput with Bert->BigBird
class BigBirdOutput(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class BigBirdLayer(nn.Module):
def __init__(self, config, seed=None):
super().__init__()
self.config = config
self.attention_type = config.attention_type
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = BigBirdAttention(config, seed=seed)
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise TypeError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = BigBirdAttention(config)
self.intermediate = BigBirdIntermediate(config)
self.output = BigBirdOutput(config)
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
self.attention.set_attention_type(value)
if self.add_cross_attention:
self.crossattention.set_attention_type(value)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
band_mask=None,
from_mask=None,
to_mask=None,
blocked_encoder_mask=None,
past_key_value=None,
output_attentions=False,
):
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=self_attn_past_key_value,
output_attentions=output_attentions,
band_mask=band_mask,
from_mask=from_mask,
to_mask=to_mask,
from_blocked_mask=blocked_encoder_mask,
to_blocked_mask=blocked_encoder_mask,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with "
" cross-attention layers by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
cross_attn_past_key_value,
output_attentions,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
layer_output = apply_chunking_to_forward(
self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
)
outputs = (layer_output,) + outputs
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def feed_forward_chunk(self, attention_output):
intermediate_output = self.intermediate(attention_output)
layer_output = self.output(intermediate_output, attention_output)
return layer_output
class BigBirdEncoder(nn.Module):
def __init__(self, config):
super().__init__()
self.config = config
self.attention_type = config.attention_type
self.layer = nn.ModuleList(
[BigBirdLayer(config, seed=layer_idx) for layer_idx in range(config.num_hidden_layers)]
)
self.gradient_checkpointing = False
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
for layer in self.layer:
layer.set_attention_type(value)
def forward(
self,
hidden_states,
attention_mask=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=False,
output_hidden_states=False,
band_mask=None,
from_mask=None,
to_mask=None,
blocked_encoder_mask=None,
return_dict=True,
) -> Union[BaseModelOutputWithPastAndCrossAttentions, Tuple]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
if self.gradient_checkpointing and self.training:
if use_cache:
logger.warning_once(
"`use_cache=True` is incompatible with gradient checkpointing. Setting `use_cache=False`..."
)
use_cache = False
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
past_key_value = past_key_values[i] if past_key_values is not None else None
if self.gradient_checkpointing and self.training:
def create_custom_forward(module):
def custom_forward(*inputs):
return module(*inputs, past_key_value, output_attentions)
return custom_forward
layer_outputs = torch.utils.checkpoint.checkpoint(
create_custom_forward(layer_module),
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
band_mask,
from_mask,
to_mask,
blocked_encoder_mask,
)
else:
layer_outputs = layer_module(
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states,
encoder_attention_mask,
band_mask,
from_mask,
to_mask,
blocked_encoder_mask,
past_key_value,
output_attentions,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if self.config.add_cross_attention:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v
for v in [
hidden_states,
next_decoder_cache,
all_hidden_states,
all_self_attentions,
all_cross_attentions,
]
if v is not None
)
return BaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_bert.BertPredictionHeadTransform with Bert->BigBird
class BigBirdPredictionHeadTransform(nn.Module):
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
if isinstance(config.hidden_act, str):
self.transform_act_fn = ACT2FN[config.hidden_act]
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertLMPredictionHead with Bert->BigBird
class BigBirdLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = BigBirdPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_bert.BertOnlyMLMHead with Bert->BigBird
class BigBirdOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = BigBirdLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
# Copied from transformers.models.bert.modeling_bert.BertOnlyNSPHead with Bert->BigBird
class BigBirdOnlyNSPHead(nn.Module):
def __init__(self, config):
super().__init__()
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, pooled_output):
seq_relationship_score = self.seq_relationship(pooled_output)
return seq_relationship_score
# Copied from transformers.models.bert.modeling_bert.BertPreTrainingHeads with Bert->BigBird
class BigBirdPreTrainingHeads(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = BigBirdLMPredictionHead(config)
self.seq_relationship = nn.Linear(config.hidden_size, 2)
def forward(self, sequence_output, pooled_output):
prediction_scores = self.predictions(sequence_output)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class BigBirdPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = BigBirdConfig
load_tf_weights = load_tf_weights_in_big_bird
base_model_prefix = "bert"
supports_gradient_checkpointing = True
_keys_to_ignore_on_load_missing = [r"position_ids"]
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
def _set_gradient_checkpointing(self, module, value=False):
if isinstance(module, BigBirdEncoder):
module.gradient_checkpointing = value
BIG_BIRD_START_DOCSTRING = r"""
This model is a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) sub-class. Use
it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and
behavior.
Parameters:
config ([`BigBirdConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
"""
BIG_BIRD_INPUTS_DOCSTRING = r"""
Args:
input_ids (`torch.LongTensor` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`torch.LongTensor` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
[What are position IDs?](../glossary#position-ids)
head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*):
Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*):
Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This
is useful if you want more control over how to convert *input_ids* indices into associated vectors than the
model's internal embedding lookup matrix.
output_attentions (`bool`, *optional*):
Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
tensors for more detail.
output_hidden_states (`bool`, *optional*):
Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
more detail.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
@dataclass
class BigBirdForPreTrainingOutput(ModelOutput):
"""
Output type of [`BigBirdForPreTraining`].
Args:
loss (*optional*, returned when `labels` is provided, `torch.FloatTensor` of shape `(1,)`):
Total loss as the sum of the masked language modeling loss and the next sequence prediction
(classification) loss.
prediction_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`torch.FloatTensor` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
prediction_logits: torch.FloatTensor = None
seq_relationship_logits: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@dataclass
class BigBirdForQuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of question answering models.
Args:
loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided):
Total span extraction loss is the sum of a Cross-Entropy for the start and end positions.
start_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
pooler_output (`torch.FloatTensor` of shape `(batch_size, 1)`):
pooler output from BigBigModel
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
loss: Optional[torch.FloatTensor] = None
start_logits: torch.FloatTensor = None
end_logits: torch.FloatTensor = None
pooler_output: torch.FloatTensor = None
hidden_states: Optional[Tuple[torch.FloatTensor]] = None
attentions: Optional[Tuple[torch.FloatTensor]] = None
@add_start_docstrings(
"The bare BigBird Model transformer outputting raw hidden-states without any specific head on top.",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdModel(BigBirdPreTrainedModel):
"""
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
To behave as an decoder the model needs to be initialized with the `is_decoder` argument of the configuration set
to `True`. To be used in a Seq2Seq model, the model needs to initialized with both `is_decoder` argument and
`add_cross_attention` set to `True`; an `encoder_hidden_states` is then expected as an input to the forward pass.
"""
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.attention_type = self.config.attention_type
self.config = config
self.block_size = self.config.block_size
self.embeddings = BigBirdEmbeddings(config)
self.encoder = BigBirdEncoder(config)
if add_pooling_layer:
self.pooler = nn.Linear(config.hidden_size, config.hidden_size)
self.activation = nn.Tanh()
else:
self.pooler = None
self.activation = None
if self.attention_type != "original_full" and config.add_cross_attention:
logger.warning(
"When using `BigBirdForCausalLM` as decoder, then `attention_type` must be `original_full`. Setting"
" `attention_type=original_full`"
)
self.set_attention_type("original_full")
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def set_attention_type(self, value: str):
if value not in ["original_full", "block_sparse"]:
raise ValueError(
f"attention_type can only be set to either 'original_full' or 'block_sparse', but is {value}"
)
# attention type is already correctly set
if value == self.attention_type:
return
self.attention_type = value
self.encoder.set_attention_type(value)
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=BaseModelOutputWithPoolingAndCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[BaseModelOutputWithPoolingAndCrossAttentions, Tuple[torch.FloatTensor]]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if self.config.is_decoder:
use_cache = use_cache if use_cache is not None else self.config.use_cache
else:
use_cache = False
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
batch_size, seq_length = input_shape
device = input_ids.device if input_ids is not None else inputs_embeds.device
# past_key_values_length
past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0
if attention_mask is None:
attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)
if token_type_ids is None:
if hasattr(self.embeddings, "token_type_ids"):
buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)
# in order to use block_sparse attention, sequence_length has to be at least
# bigger than all global attentions: 2 * block_size
# + sliding tokens: 3 * block_size
# + random tokens: 2 * num_random_blocks * block_size
max_tokens_to_attend = (5 + 2 * self.config.num_random_blocks) * self.config.block_size
if self.attention_type == "block_sparse" and seq_length <= max_tokens_to_attend:
# change attention_type from block_sparse to original_full
sequence_length = input_ids.size(1) if input_ids is not None else inputs_embeds.size(1)
logger.warning(
"Attention type 'block_sparse' is not possible if sequence_length: "
f"{sequence_length} <= num global tokens: 2 * config.block_size "
"+ min. num sliding tokens: 3 * config.block_size "
"+ config.num_random_blocks * config.block_size "
"+ additional buffer: config.num_random_blocks * config.block_size "
f"= {max_tokens_to_attend} with config.block_size "
f"= {self.config.block_size}, config.num_random_blocks "
f"= {self.config.num_random_blocks}. "
"Changing attention type to 'original_full'..."
)
self.set_attention_type("original_full")
if self.attention_type == "block_sparse":
(
padding_len,
input_ids,
attention_mask,
token_type_ids,
position_ids,
inputs_embeds,
) = self._pad_to_block_size(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
inputs_embeds=inputs_embeds,
pad_token_id=self.config.pad_token_id,
)
else:
padding_len = 0
if self.attention_type == "block_sparse":
blocked_encoder_mask, band_mask, from_mask, to_mask = self.create_masks_for_block_sparse_attn(
attention_mask, self.block_size
)
extended_attention_mask = None
elif self.attention_type == "original_full":
blocked_encoder_mask = None
band_mask = None
from_mask = None
to_mask = None
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
else:
raise ValueError(
f"attention_type can either be original_full or block_sparse, but is {self.attention_type}"
)
# If a 2D or 3D attention mask is provided for the cross-attention
# we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
past_key_values_length=past_key_values_length,
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
band_mask=band_mask,
from_mask=from_mask,
to_mask=to_mask,
blocked_encoder_mask=blocked_encoder_mask,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooler_output = self.activation(self.pooler(sequence_output[:, 0, :])) if (self.pooler is not None) else None
# undo padding
if padding_len > 0:
# unpad `sequence_output` because the calling function is expecting a length == input_ids.size(1)
sequence_output = sequence_output[:, :-padding_len]
if not return_dict:
return (sequence_output, pooler_output) + encoder_outputs[1:]
return BaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=sequence_output,
pooler_output=pooler_output,
past_key_values=encoder_outputs.past_key_values,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
cross_attentions=encoder_outputs.cross_attentions,
)
@staticmethod
def create_masks_for_block_sparse_attn(attention_mask: torch.Tensor, block_size: int):
batch_size, seq_length = attention_mask.size()
if seq_length % block_size != 0:
raise ValueError(
f"Sequence length must be multiple of block size, but sequence length is {seq_length}, while block"
f" size is {block_size}."
)
def create_band_mask_from_inputs(from_blocked_mask, to_blocked_mask):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size,
from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size,
to_seq_length//to_block_size, to_block_size].
Returns:
float Tensor of shape [batch_size, 1, from_seq_length//from_block_size-4, from_block_size,
3*to_block_size].
"""
exp_blocked_to_pad = torch.cat(
[to_blocked_mask[:, 1:-3], to_blocked_mask[:, 2:-2], to_blocked_mask[:, 3:-1]], dim=2
)
band_mask = torch.einsum("blq,blk->blqk", from_blocked_mask[:, 2:-2], exp_blocked_to_pad)
band_mask.unsqueeze_(1)
return band_mask
blocked_encoder_mask = attention_mask.view(batch_size, seq_length // block_size, block_size)
band_mask = create_band_mask_from_inputs(blocked_encoder_mask, blocked_encoder_mask)
from_mask = attention_mask.view(batch_size, 1, seq_length, 1)
to_mask = attention_mask.view(batch_size, 1, 1, seq_length)
return blocked_encoder_mask, band_mask, from_mask, to_mask
def _pad_to_block_size(
self,
input_ids: torch.Tensor,
attention_mask: torch.Tensor,
token_type_ids: torch.Tensor,
position_ids: torch.Tensor,
inputs_embeds: torch.Tensor,
pad_token_id: int,
):
"""A helper function to pad tokens and mask to work with implementation of BigBird block-sparse attention."""
# padding
block_size = self.config.block_size
input_shape = input_ids.shape if input_ids is not None else inputs_embeds.shape
batch_size, seq_len = input_shape[:2]
padding_len = (block_size - seq_len % block_size) % block_size
if padding_len > 0:
logger.info(
f"Input ids are automatically padded from {seq_len} to {seq_len + padding_len} to be a multiple of "
f"`config.block_size`: {block_size}"
)
if input_ids is not None:
input_ids = nn.functional.pad(input_ids, (0, padding_len), value=pad_token_id)
if position_ids is not None:
# pad with position_id = pad_token_id as in modeling_bigbird.BigBirdEmbeddings
position_ids = nn.functional.pad(position_ids, (0, padding_len), value=pad_token_id)
if inputs_embeds is not None:
input_ids_padding = inputs_embeds.new_full(
(batch_size, padding_len),
self.config.pad_token_id,
dtype=torch.long,
)
inputs_embeds_padding = self.embeddings(input_ids_padding)
inputs_embeds = torch.cat([inputs_embeds, inputs_embeds_padding], dim=-2)
attention_mask = nn.functional.pad(
attention_mask, (0, padding_len), value=False
) # no attention on the padding tokens
token_type_ids = nn.functional.pad(token_type_ids, (0, padding_len), value=0) # pad with token_type_id = 0
return padding_len, input_ids, attention_mask, token_type_ids, position_ids, inputs_embeds
class BigBirdForPreTraining(BigBirdPreTrainedModel):
_keys_to_ignore_on_load_missing = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
self.bert = BigBirdModel(config, add_pooling_layer=True)
self.cls = BigBirdPreTrainingHeads(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BigBirdForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.FloatTensor] = None,
next_sentence_label: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[BigBirdForPreTrainingOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
next_sentence_label (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the next sequence prediction (classification) loss. If specified, nsp loss will be
added to masked_lm loss. Input should be a sequence pair (see `input_ids` docstring) Indices should be in
`[0, 1]`:
- 0 indicates sequence B is a continuation of sequence A,
- 1 indicates sequence B is a random sequence.
kwargs (`Dict[str, any]`, optional, defaults to *{}*):
Used to hide legacy arguments that have been deprecated.
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, BigBirdForPreTraining
>>> import torch
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = BigBirdForPreTraining.from_pretrained("google/bigbird-roberta-base")
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
>>> outputs = model(**inputs)
>>> prediction_logits = outputs.prediction_logits
>>> seq_relationship_logits = outputs.seq_relationship_logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output, pooled_output = outputs[:2]
prediction_scores, seq_relationship_score = self.cls(sequence_output, pooled_output)
total_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
total_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if next_sentence_label is not None and total_loss is not None:
next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), next_sentence_label.view(-1))
total_loss = total_loss + next_sentence_loss
if not return_dict:
output = (prediction_scores, seq_relationship_score) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return BigBirdForPreTrainingOutput(
loss=total_loss,
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""BigBird Model with a `language modeling` head on top.""", BIG_BIRD_START_DOCSTRING)
class BigBirdForMaskedLM(BigBirdPreTrainedModel):
_keys_to_ignore_on_load_missing = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
def __init__(self, config):
super().__init__(config)
if config.is_decoder:
logger.warning(
"If you want to use `BigBirdForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.bert = BigBirdModel(config)
self.cls = BigBirdOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[MaskedLMOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`.
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, BigBirdForMaskedLM
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = BigBirdForMaskedLM.from_pretrained("google/bigbird-roberta-base")
>>> squad_ds = load_dataset("squad_v2", split="train") # doctest: +IGNORE_RESULT
>>> # select random long article
>>> LONG_ARTICLE_TARGET = squad_ds[81514]["context"]
>>> # select random sentence
>>> LONG_ARTICLE_TARGET[332:398]
'the highest values are very close to the theoretical maximum value'
>>> # add mask_token
>>> LONG_ARTICLE_TO_MASK = LONG_ARTICLE_TARGET.replace("maximum", "[MASK]")
>>> inputs = tokenizer(LONG_ARTICLE_TO_MASK, return_tensors="pt")
>>> # long article input
>>> list(inputs["input_ids"].shape)
[1, 919]
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> # retrieve index of [MASK]
>>> mask_token_index = (inputs.input_ids == tokenizer.mask_token_id)[0].nonzero(as_tuple=True)[0]
>>> predicted_token_id = logits[0, mask_token_index].argmax(axis=-1)
>>> tokenizer.decode(predicted_token_id)
'maximum'
```
```python
>>> labels = tokenizer(LONG_ARTICLE_TARGET, return_tensors="pt")["input_ids"]
>>> labels = torch.where(inputs.input_ids == tokenizer.mask_token_id, labels, -100)
>>> outputs = model(**inputs, labels=labels)
>>> round(outputs.loss.item(), 2)
1.08
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def prepare_inputs_for_generation(self, input_ids, attention_mask=None, **model_kwargs):
input_shape = input_ids.shape
effective_batch_size = input_shape[0]
# add a dummy token
if self.config.pad_token_id is None:
raise ValueError("The PAD token should be defined for generation")
attention_mask = torch.cat([attention_mask, attention_mask.new_zeros((attention_mask.shape[0], 1))], dim=-1)
dummy_token = torch.full(
(effective_batch_size, 1), self.config.pad_token_id, dtype=torch.long, device=input_ids.device
)
input_ids = torch.cat([input_ids, dummy_token], dim=1)
return {"input_ids": input_ids, "attention_mask": attention_mask}
@add_start_docstrings(
"""BigBird Model with a `language modeling` head on top for CLM fine-tuning.""", BIG_BIRD_START_DOCSTRING
)
class BigBirdForCausalLM(BigBirdPreTrainedModel):
_keys_to_ignore_on_load_missing = [
r"position_ids",
r"predictions.decoder.bias",
"cls.predictions.decoder.weight",
"cls.predictions.decoder.bias",
]
def __init__(self, config):
super().__init__(config)
if not config.is_decoder:
logger.warning("If you want to use `BigBirdForCausalLM` as a standalone, add `is_decoder=True.`")
self.bert = BigBirdModel(config)
self.cls = BigBirdOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=CausalLMOutputWithCrossAttentions,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
labels: Optional[torch.LongTensor] = None,
use_cache: Optional[bool] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[CausalLMOutputWithCrossAttentions, Tuple[torch.FloatTensor]]:
r"""
encoder_hidden_states (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`, *optional*):
Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
the model is configured as a decoder.
encoder_attention_mask (`torch.FloatTensor` of shape `(batch_size, sequence_length)`, *optional*):
Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
the cross-attention if the model is configured as a decoder. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
past_key_values (`tuple(tuple(torch.FloatTensor))` of length `config.n_layers` with each tuple having 4 tensors of shape `(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.
If `past_key_values` are used, the user can optionally input only the last `decoder_input_ids` (those that
don't have their past key value states given to this model) of shape `(batch_size, 1)` instead of all
`decoder_input_ids` of shape `(batch_size, sequence_length)`.
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the left-to-right language modeling loss (next word prediction). Indices should be in
`[-100, 0, ..., config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are
ignored (masked), the loss is only computed for the tokens with labels n `[0, ..., config.vocab_size]`.
use_cache (`bool`, *optional*):
If set to `True`, `past_key_values` key value states are returned and can be used to speed up decoding (see
`past_key_values`).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_values=past_key_values,
use_cache=use_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
lm_loss = None
if labels is not None:
# we are doing next-token prediction; shift prediction scores and input ids by one
shifted_prediction_scores = prediction_scores[:, :-1, :].contiguous()
labels = labels[:, 1:].contiguous()
loss_fct = CrossEntropyLoss()
lm_loss = loss_fct(shifted_prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((lm_loss,) + output) if lm_loss is not None else output
return CausalLMOutputWithCrossAttentions(
loss=lm_loss,
logits=prediction_scores,
past_key_values=outputs.past_key_values,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
def prepare_inputs_for_generation(self, input_ids, past_key_values=None, attention_mask=None, **model_kwargs):
input_shape = input_ids.shape
# if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
if attention_mask is None:
attention_mask = input_ids.new_ones(input_shape)
# cut decoder_input_ids if past is used
if past_key_values is not None:
input_ids = input_ids[:, -1:]
return {"input_ids": input_ids, "attention_mask": attention_mask, "past_key_values": past_key_values}
def _reorder_cache(self, past_key_values, beam_idx):
reordered_past = ()
for layer_past in past_key_values:
reordered_past += (
tuple(past_state.index_select(0, beam_idx) for past_state in layer_past[:2]) + layer_past[2:],
)
return reordered_past
class BigBirdClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
def __init__(self, config):
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.out_proj = nn.Linear(config.hidden_size, config.num_labels)
self.config = config
def forward(self, features, **kwargs):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x)
x = self.dense(x)
x = ACT2FN[self.config.hidden_act](x)
x = self.dropout(x)
x = self.out_proj(x)
return x
@add_start_docstrings(
"""
BigBird Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForSequenceClassification(BigBirdPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.config = config
self.bert = BigBirdModel(config)
self.classifier = BigBirdClassificationHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[SequenceClassifierOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, BigBirdForSequenceClassification
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("l-yohai/bigbird-roberta-base-mnli")
>>> model = BigBirdForSequenceClassification.from_pretrained("l-yohai/bigbird-roberta-base-mnli")
>>> squad_ds = load_dataset("squad_v2", split="train") # doctest: +IGNORE_RESULT
>>> LONG_ARTICLE = squad_ds[81514]["context"]
>>> inputs = tokenizer(LONG_ARTICLE, return_tensors="pt")
>>> # long input article
>>> list(inputs["input_ids"].shape)
[1, 919]
>>> with torch.no_grad():
... logits = model(**inputs).logits
>>> predicted_class_id = logits.argmax().item()
>>> model.config.id2label[predicted_class_id]
'LABEL_0'
```
```python
>>> num_labels = len(model.config.id2label)
>>> model = BigBirdForSequenceClassification.from_pretrained(
... "l-yohai/bigbird-roberta-base-mnli", num_labels=num_labels
... )
>>> labels = torch.tensor(1)
>>> loss = model(**inputs, labels=labels).loss
>>> round(loss.item(), 2)
1.13
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForMultipleChoice(BigBirdPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.bert = BigBirdModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, 1)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(
BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=MultipleChoiceModelOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[MultipleChoiceModelOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the multiple choice classification loss. Indices should be in `[0, ...,
num_choices-1]` where `num_choices` is the size of the second dimension of the input tensors. (See
`input_ids` above)
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]
input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
inputs_embeds = (
inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
if inputs_embeds is not None
else None
)
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
reshaped_logits = logits.view(-1, num_choices)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(reshaped_logits, labels)
if not return_dict:
output = (reshaped_logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return MultipleChoiceModelOutput(
loss=loss,
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForTokenClassification(BigBirdPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.bert = BigBirdModel(config)
classifier_dropout = (
config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TokenClassifierOutput,
config_class=_CONFIG_FOR_DOC,
)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[TokenClassifierOutput, Tuple[torch.FloatTensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the token classification loss. Indices should be in `[0, ..., config.num_labels - 1]`.
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
sequence_output = self.dropout(sequence_output)
logits = self.classifier(sequence_output)
loss = None
if labels is not None:
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TokenClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
class BigBirdForQuestionAnsweringHead(nn.Module):
"""Head for question answering tasks."""
def __init__(self, config):
super().__init__()
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.intermediate = BigBirdIntermediate(config)
self.output = BigBirdOutput(config)
self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)
def forward(self, encoder_output):
hidden_states = self.dropout(encoder_output)
hidden_states = self.intermediate(hidden_states)
hidden_states = self.output(hidden_states, encoder_output)
hidden_states = self.qa_outputs(hidden_states)
return hidden_states
@add_start_docstrings(
"""
BigBird Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
BIG_BIRD_START_DOCSTRING,
)
class BigBirdForQuestionAnswering(BigBirdPreTrainedModel):
def __init__(self, config, add_pooling_layer=False):
super().__init__(config)
config.num_labels = 2
self.num_labels = config.num_labels
self.sep_token_id = config.sep_token_id
self.bert = BigBirdModel(config, add_pooling_layer=add_pooling_layer)
self.qa_classifier = BigBirdForQuestionAnsweringHead(config)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BigBirdForQuestionAnsweringModelOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: torch.LongTensor = None,
attention_mask: Optional[torch.FloatTensor] = None,
question_lengths=None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
start_positions: Optional[torch.LongTensor] = None,
end_positions: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[BigBirdForQuestionAnsweringModelOutput, Tuple[torch.FloatTensor]]:
r"""
start_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the start of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
end_positions (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for position (index) of the end of the labelled span for computing the token classification loss.
Positions are clamped to the length of the sequence (`sequence_length`). Position outside of the sequence
are not taken into account for computing the loss.
Returns:
Example:
```python
>>> import torch
>>> from transformers import AutoTokenizer, BigBirdForQuestionAnswering
>>> from datasets import load_dataset
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = BigBirdForQuestionAnswering.from_pretrained("google/bigbird-roberta-base")
>>> squad_ds = load_dataset("squad_v2", split="train") # doctest: +IGNORE_RESULT
>>> # select random article and question
>>> LONG_ARTICLE = squad_ds[81514]["context"]
>>> QUESTION = squad_ds[81514]["question"]
>>> QUESTION
'During daytime how high can the temperatures reach?'
>>> inputs = tokenizer(QUESTION, LONG_ARTICLE, return_tensors="pt")
>>> # long article and question input
>>> list(inputs["input_ids"].shape)
[1, 929]
>>> with torch.no_grad():
... outputs = model(**inputs)
>>> answer_start_index = outputs.start_logits.argmax()
>>> answer_end_index = outputs.end_logits.argmax()
>>> predict_answer_token_ids = inputs.input_ids[0, answer_start_index : answer_end_index + 1]
>>> predict_answer_token = tokenizer.decode(predict_answer_token_ids)
```
```python
>>> target_start_index, target_end_index = torch.tensor([130]), torch.tensor([132])
>>> outputs = model(**inputs, start_positions=target_start_index, end_positions=target_end_index)
>>> loss = outputs.loss
```
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
seqlen = input_ids.size(1) if input_ids is not None else inputs_embeds.size(1)
if question_lengths is None and input_ids is not None:
# assuming input_ids format: <cls> <question> <sep> context <sep>
question_lengths = torch.argmax(input_ids.eq(self.sep_token_id).int(), dim=-1) + 1
question_lengths.unsqueeze_(1)
logits_mask = None
if question_lengths is not None:
# setting lengths logits to `-inf`
logits_mask = self.prepare_question_mask(question_lengths, seqlen)
if token_type_ids is None:
token_type_ids = torch.ones(logits_mask.size(), dtype=int, device=logits_mask.device) - logits_mask
logits_mask = logits_mask
logits_mask[:, 0] = False
logits_mask.unsqueeze_(2)
outputs = self.bert(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.qa_classifier(sequence_output)
if logits_mask is not None:
# removing question tokens from the competition
logits = logits - logits_mask * 1e6
start_logits, end_logits = logits.split(1, dim=-1)
start_logits = start_logits.squeeze(-1).contiguous()
end_logits = end_logits.squeeze(-1).contiguous()
total_loss = None
if start_positions is not None and end_positions is not None:
# If we are on multi-GPU, split add a dimension
if len(start_positions.size()) > 1:
start_positions = start_positions.squeeze(-1)
if len(end_positions.size()) > 1:
end_positions = end_positions.squeeze(-1)
# sometimes the start/end positions are outside our model inputs, we ignore these terms
ignored_index = start_logits.size(1)
start_positions = start_positions.clamp(0, ignored_index)
end_positions = end_positions.clamp(0, ignored_index)
loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
start_loss = loss_fct(start_logits, start_positions)
end_loss = loss_fct(end_logits, end_positions)
total_loss = (start_loss + end_loss) / 2
if not return_dict:
output = (start_logits, end_logits) + outputs[2:]
return ((total_loss,) + output) if total_loss is not None else output
return BigBirdForQuestionAnsweringModelOutput(
loss=total_loss,
start_logits=start_logits,
end_logits=end_logits,
pooler_output=outputs.pooler_output,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@staticmethod
def prepare_question_mask(q_lengths: torch.Tensor, maxlen: int):
# q_lengths -> (bz, 1)
mask = torch.arange(0, maxlen).to(q_lengths.device)
mask.unsqueeze_(0) # -> (1, maxlen)
mask = torch.where(mask < q_lengths, 1, 0)
return mask
|
27182812/ChatGLM-LLaMA-chinese-insturct | 106,501 | src/transformers/models/big_bird/modeling_flax_big_bird.py | # coding=utf-8
# Copyright 2021 The Google Flax Team Authors and The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import Callable, Optional, Tuple
import flax
import flax.linen as nn
import jax
import jax.numpy as jnp
import numpy as np
from flax.core.frozen_dict import FrozenDict, freeze, unfreeze
from flax.linen import combine_masks, make_causal_mask
from flax.linen import partitioning as nn_partitioning
from flax.linen.attention import dot_product_attention_weights
from flax.traverse_util import flatten_dict, unflatten_dict
from jax import lax
from ...modeling_flax_outputs import (
FlaxBaseModelOutputWithPastAndCrossAttentions,
FlaxBaseModelOutputWithPooling,
FlaxBaseModelOutputWithPoolingAndCrossAttentions,
FlaxCausalLMOutputWithCrossAttentions,
FlaxMaskedLMOutput,
FlaxMultipleChoiceModelOutput,
FlaxSequenceClassifierOutput,
FlaxTokenClassifierOutput,
)
from ...modeling_flax_utils import (
ACT2FN,
FlaxPreTrainedModel,
append_call_sample_docstring,
append_replace_return_docstrings,
overwrite_call_docstring,
)
from ...utils import ModelOutput, add_start_docstrings, add_start_docstrings_to_model_forward, logging
from .configuration_big_bird import BigBirdConfig
logger = logging.get_logger(__name__)
_CHECKPOINT_FOR_DOC = "google/bigbird-roberta-base"
_CONFIG_FOR_DOC = "BigBirdConfig"
remat = nn_partitioning.remat
@flax.struct.dataclass
class FlaxBigBirdForPreTrainingOutput(ModelOutput):
"""
Output type of [`BigBirdForPreTraining`].
Args:
prediction_logits (`jnp.ndarray` of shape `(batch_size, sequence_length, config.vocab_size)`):
Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
seq_relationship_logits (`jnp.ndarray` of shape `(batch_size, 2)`):
Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
before SoftMax).
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
prediction_logits: jnp.ndarray = None
seq_relationship_logits: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
@flax.struct.dataclass
class FlaxBigBirdForQuestionAnsweringModelOutput(ModelOutput):
"""
Base class for outputs of question answering models.
Args:
start_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-start scores (before SoftMax).
end_logits (`jnp.ndarray` of shape `(batch_size, sequence_length)`):
Span-end scores (before SoftMax).
pooled_output (`jnp.ndarray` of shape `(batch_size, hidden_size)`):
pooled_output returned by FlaxBigBirdModel.
hidden_states (`tuple(jnp.ndarray)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `jnp.ndarray` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(jnp.ndarray)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `jnp.ndarray` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
start_logits: jnp.ndarray = None
end_logits: jnp.ndarray = None
pooled_output: jnp.ndarray = None
hidden_states: Optional[Tuple[jnp.ndarray]] = None
attentions: Optional[Tuple[jnp.ndarray]] = None
BIG_BIRD_START_DOCSTRING = r"""
This model inherits from [`FlaxPreTrainedModel`]. Check the superclass documentation for the generic methods the
library implements for all its model (such as downloading, saving and converting weights from PyTorch models)
This model is also a Flax Linen [flax.linen.Module](https://flax.readthedocs.io/en/latest/flax.linen.html#module)
subclass. Use it as a regular Flax linen Module and refer to the Flax documentation for all matter related to
general usage and behavior.
Finally, this model supports inherent JAX features such as:
- [Just-In-Time (JIT) compilation](https://jax.readthedocs.io/en/latest/jax.html#just-in-time-compilation-jit)
- [Automatic Differentiation](https://jax.readthedocs.io/en/latest/jax.html#automatic-differentiation)
- [Vectorization](https://jax.readthedocs.io/en/latest/jax.html#vectorization-vmap)
- [Parallelization](https://jax.readthedocs.io/en/latest/jax.html#parallelization-pmap)
Parameters:
config ([`BigBirdConfig`]): Model configuration class with all the parameters of the model.
Initializing with a config file does not load the weights associated with the model, only the
configuration. Check out the [`~FlaxPreTrainedModel.from_pretrained`] method to load the model weights.
dtype (`jax.numpy.dtype`, *optional*, defaults to `jax.numpy.float32`):
The data type of the computation. Can be one of `jax.numpy.float32`, `jax.numpy.float16` (on GPUs) and
`jax.numpy.bfloat16` (on TPUs).
This can be used to enable mixed-precision training or half-precision inference on GPUs or TPUs. If
specified all the computation will be performed with the given `dtype`.
**Note that this only specifies the dtype of the computation and does not influence the dtype of model
parameters.**
If you wish to change the dtype of the model parameters, see [`~FlaxPreTrainedModel.to_fp16`] and
[`~FlaxPreTrainedModel.to_bf16`].
"""
BIG_BIRD_INPUTS_DOCSTRING = r"""
Args:
input_ids (`numpy.ndarray` of shape `({0})`):
Indices of input sequence tokens in the vocabulary.
Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
[`PreTrainedTokenizer.__call__`] for details.
[What are input IDs?](../glossary#input-ids)
attention_mask (`numpy.ndarray` of shape `({0})`, *optional*):
Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
- 1 for tokens that are **not masked**,
- 0 for tokens that are **masked**.
[What are attention masks?](../glossary#attention-mask)
token_type_ids (`numpy.ndarray` of shape `({0})`, *optional*):
Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0,
1]`:
- 0 corresponds to a *sentence A* token,
- 1 corresponds to a *sentence B* token.
[What are token type IDs?](../glossary#token-type-ids)
position_ids (`numpy.ndarray` of shape `({0})`, *optional*):
Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0,
config.max_position_embeddings - 1]`.
head_mask (`numpy.ndarray` of shape `({0})`, `optional):
Mask to nullify selected heads of the attention modules. Mask values selected in `[0, 1]`:
- 1 indicates the head is **not masked**,
- 0 indicates the head is **masked**.
return_dict (`bool`, *optional*):
Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
"""
class FlaxBigBirdEmbeddings(nn.Module):
"""Construct the embeddings from word, position and token_type embeddings."""
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertEmbeddings.setup
def setup(self):
self.word_embeddings = nn.Embed(
self.config.vocab_size,
self.config.hidden_size,
embedding_init=jax.nn.initializers.normal(stddev=self.config.initializer_range),
dtype=self.dtype,
)
self.position_embeddings = nn.Embed(
self.config.max_position_embeddings,
self.config.hidden_size,
embedding_init=jax.nn.initializers.normal(stddev=self.config.initializer_range),
dtype=self.dtype,
)
self.token_type_embeddings = nn.Embed(
self.config.type_vocab_size,
self.config.hidden_size,
embedding_init=jax.nn.initializers.normal(stddev=self.config.initializer_range),
dtype=self.dtype,
)
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
def __call__(self, input_ids, token_type_ids, position_ids, attention_mask, deterministic: bool = True):
# Embed
inputs_embeds = self.word_embeddings(input_ids.astype("i4"))
position_embeds = self.position_embeddings(position_ids.astype("i4"))
token_type_embeddings = self.token_type_embeddings(token_type_ids.astype("i4"))
if self.config.rescale_embeddings:
inputs_embeds *= self.config.hidden_size**0.5
# Sum all embeddings
hidden_states = inputs_embeds + token_type_embeddings + position_embeds
# Layer Norm
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.LayerNorm(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertSelfAttention with Bert->BigBird
class FlaxBigBirdSelfAttention(nn.Module):
config: BigBirdConfig
causal: bool = False
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.head_dim = self.config.hidden_size // self.config.num_attention_heads
if self.config.hidden_size % self.config.num_attention_heads != 0:
raise ValueError(
"`config.hidden_size`: {self.config.hidden_size} has to be a multiple of `config.num_attention_heads` "
" : {self.config.num_attention_heads}"
)
self.query = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.key = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.value = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
if self.causal:
self.causal_mask = make_causal_mask(
jnp.ones((1, self.config.max_position_embeddings), dtype="bool"), dtype="bool"
)
def _split_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.config.num_attention_heads, self.head_dim))
def _merge_heads(self, hidden_states):
return hidden_states.reshape(hidden_states.shape[:2] + (self.config.hidden_size,))
@nn.compact
# Copied from transformers.models.bart.modeling_flax_bart.FlaxBartAttention._concatenate_to_cache
def _concatenate_to_cache(self, key, value, query, attention_mask):
"""
This function takes projected key, value states from a single input token and concatenates the states to cached
states from previous steps. This function is slighly adapted from the official Flax repository:
https://github.com/google/flax/blob/491ce18759622506588784b4fca0e4bf05f8c8cd/flax/linen/attention.py#L252
"""
# detect if we're initializing by absence of existing cache data.
is_initialized = self.has_variable("cache", "cached_key")
cached_key = self.variable("cache", "cached_key", jnp.zeros, key.shape, key.dtype)
cached_value = self.variable("cache", "cached_value", jnp.zeros, value.shape, value.dtype)
cache_index = self.variable("cache", "cache_index", lambda: jnp.array(0, dtype=jnp.int32))
if is_initialized:
*batch_dims, max_length, num_heads, depth_per_head = cached_key.value.shape
# update key, value caches with our new 1d spatial slices
cur_index = cache_index.value
indices = (0,) * len(batch_dims) + (cur_index, 0, 0)
key = lax.dynamic_update_slice(cached_key.value, key, indices)
value = lax.dynamic_update_slice(cached_value.value, value, indices)
cached_key.value = key
cached_value.value = value
num_updated_cache_vectors = query.shape[1]
cache_index.value = cache_index.value + num_updated_cache_vectors
# causal mask for cached decoder self-attention: our single query position should only attend to those key positions that have already been generated and cached, not the remaining zero elements.
pad_mask = jnp.broadcast_to(
jnp.arange(max_length) < cur_index + num_updated_cache_vectors,
tuple(batch_dims) + (1, num_updated_cache_vectors, max_length),
)
attention_mask = combine_masks(pad_mask, attention_mask)
return key, value, attention_mask
def __call__(
self,
hidden_states,
attention_mask,
layer_head_mask,
key_value_states: Optional[jnp.array] = None,
init_cache: bool = False,
deterministic=True,
output_attentions: bool = False,
):
# if key_value_states are provided this layer is used as a cross-attention layer
# for the decoder
is_cross_attention = key_value_states is not None
batch_size = hidden_states.shape[0]
# get query proj
query_states = self.query(hidden_states)
# get key, value proj
if is_cross_attention:
# cross_attentions
key_states = self.key(key_value_states)
value_states = self.value(key_value_states)
else:
# self_attention
key_states = self.key(hidden_states)
value_states = self.value(hidden_states)
query_states = self._split_heads(query_states)
key_states = self._split_heads(key_states)
value_states = self._split_heads(value_states)
# handle cache prepare causal attention mask
if self.causal:
query_length, key_length = query_states.shape[1], key_states.shape[1]
if self.has_variable("cache", "cached_key"):
mask_shift = self.variables["cache"]["cache_index"]
max_decoder_length = self.variables["cache"]["cached_key"].shape[1]
causal_mask = lax.dynamic_slice(
self.causal_mask, (0, 0, mask_shift, 0), (1, 1, query_length, max_decoder_length)
)
else:
causal_mask = self.causal_mask[:, :, :query_length, :key_length]
causal_mask = jnp.broadcast_to(causal_mask, (batch_size,) + causal_mask.shape[1:])
# combine masks if needed
if attention_mask is not None and self.causal:
attention_mask = jnp.broadcast_to(jnp.expand_dims(attention_mask, axis=(-3, -2)), causal_mask.shape)
attention_mask = combine_masks(attention_mask, causal_mask)
elif self.causal:
attention_mask = causal_mask
elif attention_mask is not None:
attention_mask = jnp.expand_dims(attention_mask, axis=(-3, -2))
# During fast autoregressive decoding, we feed one position at a time,
# and cache the keys and values step by step.
if self.causal and (self.has_variable("cache", "cached_key") or init_cache):
key_states, value_states, attention_mask = self._concatenate_to_cache(
key_states, value_states, query_states, attention_mask
)
# Convert the boolean attention mask to an attention bias.
if attention_mask is not None:
# attention mask in the form of attention bias
attention_bias = lax.select(
attention_mask > 0,
jnp.full(attention_mask.shape, 0.0).astype(self.dtype),
jnp.full(attention_mask.shape, jnp.finfo(self.dtype).min).astype(self.dtype),
)
else:
attention_bias = None
dropout_rng = None
if not deterministic and self.config.attention_probs_dropout_prob > 0.0:
dropout_rng = self.make_rng("dropout")
attn_weights = dot_product_attention_weights(
query_states,
key_states,
bias=attention_bias,
dropout_rng=dropout_rng,
dropout_rate=self.config.attention_probs_dropout_prob,
broadcast_dropout=True,
deterministic=deterministic,
dtype=self.dtype,
precision=None,
)
# Mask heads if we want to
if layer_head_mask is not None:
attn_weights = jnp.einsum("...hqk,h->...hqk", attn_weights, layer_head_mask)
attn_output = jnp.einsum("...hqk,...khd->...qhd", attn_weights, value_states)
attn_output = attn_output.reshape(attn_output.shape[:2] + (-1,))
outputs = (attn_output, attn_weights) if output_attentions else (attn_output,)
return outputs
class FlaxBigBirdBlockSparseAttention(nn.Module):
config: BigBirdConfig
block_sparse_seed: int = None
dtype: jnp.dtype = jnp.float32
def setup(self):
self.query = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
use_bias=self.config.use_bias,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.key = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
use_bias=self.config.use_bias,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
self.value = nn.Dense(
self.config.hidden_size,
dtype=self.dtype,
use_bias=self.config.use_bias,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
)
@staticmethod
def transpose_for_scores(x, n_heads, head_size):
new_x_shape = x.shape[:-1] + (n_heads, head_size)
x = x.reshape(*new_x_shape)
return jnp.transpose(x, axes=(0, 2, 1, 3))
def __call__(
self,
hidden_states,
attention_mask,
deterministic=True,
output_attentions=False,
):
n_heads = self.config.num_attention_heads
head_size = self.config.hidden_size // n_heads
blocked_encoder_mask, band_mask, from_mask, to_mask = self.create_masks_for_block_sparse_attn(
attention_mask, self.config.block_size
)
query_layer = self.transpose_for_scores(self.query(hidden_states), n_heads, head_size)
key_layer = self.transpose_for_scores(self.key(hidden_states), n_heads, head_size)
value_layer = self.transpose_for_scores(self.value(hidden_states), n_heads, head_size)
attn_output, attn_weights = self.bigbird_block_sparse_attention(
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
blocked_encoder_mask,
blocked_encoder_mask,
n_heads,
head_size,
plan_from_length=None,
plan_num_rand_blocks=None,
output_attentions=output_attentions,
)
outputs = (attn_output, attn_weights) if output_attentions else (attn_output,)
return outputs
@staticmethod
def create_masks_for_block_sparse_attn(attention_mask, block_size: int):
batch_size, seq_length = attention_mask.shape
if seq_length % block_size != 0:
raise ValueError(
f"Sequence length must be multiple of block size, but sequence length is {seq_length}, while block"
f" size is {block_size}."
)
def create_band_mask_from_inputs(from_blocked_mask, to_blocked_mask):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size,
from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size,
to_seq_length//to_block_size, to_block_size].
Returns:
float Tensor of shape [batch_size, 1, from_seq_length//from_block_size-4, from_block_size,
3*to_block_size].
"""
exp_blocked_to_pad = jnp.concatenate(
[to_blocked_mask[:, 1:-3], to_blocked_mask[:, 2:-2], to_blocked_mask[:, 3:-1]], axis=2
)
band_mask = jnp.einsum("blq,blk->blqk", from_blocked_mask[:, 2:-2], exp_blocked_to_pad)
band_mask = jnp.expand_dims(band_mask, 1)
return band_mask
blocked_encoder_mask = attention_mask.reshape(batch_size, seq_length // block_size, block_size)
band_mask = create_band_mask_from_inputs(blocked_encoder_mask, blocked_encoder_mask)
from_mask = attention_mask.reshape(batch_size, 1, seq_length, 1)
to_mask = attention_mask.reshape(batch_size, 1, 1, seq_length)
return blocked_encoder_mask, band_mask, from_mask, to_mask
def bigbird_block_sparse_attention(
self,
query_layer,
key_layer,
value_layer,
band_mask,
from_mask,
to_mask,
from_blocked_mask,
to_blocked_mask,
n_heads,
head_size,
plan_from_length=None,
plan_num_rand_blocks=None,
output_attentions=None,
):
# BigBird block-sparse attention as suggested in paper
# ITC:
# global tokens: 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# ETC:
# global tokens: extra_globals_tokens + 2 x block_size
# window tokens: 3 x block_size
# random tokens: num_rand_tokens x block_size
# Note:
# 1) Currently, ETC is not supported.
# 2) Window size is fixed to 3 blocks & it can be changed only by
# changing `block_size`.
# 3) Number of global blocks are fixed (2 blocks here) & global tokens can be
# controlled only by `block_size`.
# attention is calculated separately for q[0], q[1], q[2:-2], q[-2], q[-1] in order to use special trick of
# shifting tokens (for calculating sliding attention). hence following code can be divided into 5 parts.
bsz, _, from_seq_len, _ = query_layer.shape
to_seq_len = key_layer.shape[2]
from_block_size = to_block_size = self.config.block_size
if from_seq_len % from_block_size != 0:
raise ValueError("Query sided sequence length must be multiple of block size")
if to_seq_len % to_block_size != 0:
raise ValueError("Key/Value sided sequence length must be multiple of block size")
if from_seq_len // from_block_size != to_seq_len // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
n_rand_blocks = self.config.num_random_blocks
rsqrt_d = 1 / jnp.sqrt(head_size)
attn_mask_penalty = -10000.0
np.random.seed(self.block_sparse_seed)
if from_seq_len in [1024, 3072, 4096]: # old plans used in paper
max_seqlen = self.config.max_position_embeddings
rand_attn = [
self._bigbird_block_rand_mask(
max_seqlen, max_seqlen, from_block_size, to_block_size, n_rand_blocks, last_idx=1024
)[: (from_seq_len // from_block_size - 2)]
for _ in range(n_heads)
]
else:
if plan_from_length is None:
plan_from_length, plan_num_rand_blocks = self._get_rand_attn_plan(
from_seq_len, from_block_size, n_rand_blocks
)
rand_attn = self._bigbird_block_rand_mask_with_head(
from_seq_length=from_seq_len,
to_seq_length=to_seq_len,
from_block_size=from_block_size,
to_block_size=to_block_size,
num_heads=n_heads,
plan_from_length=plan_from_length,
plan_num_rand_blocks=plan_num_rand_blocks,
)
rand_attn = jnp.stack(rand_attn, axis=0)
rand_attn = jnp.broadcast_to(rand_attn, (bsz,) + rand_attn.shape)
rand_mask = self._create_rand_mask_from_inputs(
from_blocked_mask, to_blocked_mask, rand_attn, n_heads, n_rand_blocks, bsz, from_seq_len, from_block_size
)
blocked_query_matrix = query_layer.reshape(bsz, n_heads, from_seq_len // from_block_size, from_block_size, -1)
blocked_key_matrix = key_layer.reshape(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
blocked_value_matrix = value_layer.reshape(bsz, n_heads, to_seq_len // to_block_size, to_block_size, -1)
shape = (bsz, n_heads, to_seq_len // to_block_size - 2, n_rand_blocks * to_block_size, -1)
gathered_key = self.jax_gather(blocked_key_matrix, rand_attn, batch_dims=2).reshape(*shape)
gathered_value = self.jax_gather(blocked_value_matrix, rand_attn, batch_dims=2).reshape(*shape)
# 1st PART
# 1st block (global block) attention scores
# q[0] x (k[0], k[1], k[2], k[3], k[4] .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
first_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, 0], key_layer)
first_product = first_product * rsqrt_d
first_product += (1.0 - to_mask) * attn_mask_penalty
first_attn_weights = jax.nn.softmax(first_product, axis=-1) # [bsz, n_heads, from_block_size, to_seq_len]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
first_context_layer = jnp.einsum("bhqk,bhkd->bhqd", first_attn_weights, value_layer)
first_context_layer = jnp.expand_dims(first_context_layer, 2)
# 2nd PART
# 2nd block attention scores
# q[1] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> 2nd, 3rd blocks
# global key blocks -> 1st block
second_key_mat = jnp.concatenate(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, 1],
blocked_key_matrix[:, :, 2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, 0],
],
axis=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
second_value_mat = jnp.concatenate(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, 1],
blocked_value_matrix[:, :, 2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, 0],
],
axis=2,
) # [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, 1], second_key_mat)
second_seq_pad = jnp.concatenate(
[
to_mask[:, :, :, : 3 * to_block_size],
to_mask[:, :, :, -to_block_size:],
jnp.ones([bsz, 1, 1, n_rand_blocks * to_block_size], dtype=to_mask.dtype),
],
axis=3,
)
second_rand_pad = jnp.concatenate(
[
jnp.ones([bsz, n_heads, from_block_size, 4 * to_block_size], dtype=rand_mask.dtype),
rand_mask[:, :, 0],
],
axis=3,
)
second_product = second_product * rsqrt_d
second_product += (1.0 - jnp.minimum(second_seq_pad, second_rand_pad)) * attn_mask_penalty
second_attn_weights = jax.nn.softmax(
second_product, axis=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+r)*to_block_size] x [bsz, n_heads, (4+r)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, -1]
second_context_layer = jnp.einsum("bhqk,bhkd->bhqd", second_attn_weights, second_value_mat)
second_context_layer = jnp.expand_dims(second_context_layer, 2)
# 3rd PART
# Middle blocks attention scores
# q[-2:2] x (sliding_keys, random_keys, global_keys)
# sliding attn is calculated using special trick of shifting tokens as discussed in paper
# random keys are generated by taking random indices as per `rand_attn`
# global keys -> 1st & last block
exp_blocked_key_matrix = jnp.concatenate(
[blocked_key_matrix[:, :, 1:-3], blocked_key_matrix[:, :, 2:-2], blocked_key_matrix[:, :, 3:-1]], axis=3
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
exp_blocked_value_matrix = jnp.concatenate(
[blocked_value_matrix[:, :, 1:-3], blocked_value_matrix[:, :, 2:-2], blocked_value_matrix[:, :, 3:-1]],
axis=3,
) # [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
middle_query_matrix = blocked_query_matrix[:, :, 2:-2]
# sliding attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [b, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
inner_band_product = jnp.einsum("bhlqd,bhlkd->bhlqk", middle_query_matrix, exp_blocked_key_matrix)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, 3*to_block_size]
inner_band_product = inner_band_product * rsqrt_d
# randn attention scores for q[-2:2]
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
rand_band_product = jnp.einsum("bhlqd,bhlkd->bhlqk", middle_query_matrix, gathered_key[:, :, 1:-1])
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size]
rand_band_product = rand_band_product * rsqrt_d
# Including 1st block (since it's global)
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
first_band_product = jnp.einsum("bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, 0])
first_band_product = first_band_product * rsqrt_d
# Including last block (since it's global)
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size]
last_band_product = jnp.einsum("bhlqd,bhkd->bhlqk", middle_query_matrix, blocked_key_matrix[:, :, -1])
last_band_product = last_band_product * rsqrt_d
# masking padded tokens
inner_band_product += (1.0 - band_mask) * attn_mask_penalty
first_band_product += (1.0 - jnp.expand_dims(to_mask[:, :, :, :to_block_size], 3)) * attn_mask_penalty
last_band_product += (1.0 - jnp.expand_dims(to_mask[:, :, :, -to_block_size:], 3)) * attn_mask_penalty
rand_band_product += (1.0 - rand_mask[:, :, 1:-1]) * attn_mask_penalty
# completing attention scores matrix for all q[-2:2]
band_product = jnp.concatenate(
[first_band_product, inner_band_product, rand_band_product, last_band_product], axis=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# safely doing softmax since attention matrix is completed
attn_weights = jax.nn.softmax(
band_product, axis=-1
) # [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, (5+n_rand_blocks)*to_block_size]
# contribution of sliding keys
# [bsz, n_heads, m//from_block_size-4, from_block_size, 3*to_block_size]
# x [bsz, n_heads, from_seq_len//from_block_size-4, 3*to_block_size, -1]
context_layer = jnp.einsum(
"bhlqk,bhlkd->bhlqd", attn_weights[:, :, :, :, to_block_size : 4 * to_block_size], exp_blocked_value_matrix
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of random keys
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, n_rand_blocks*to_block_size]
# x [bsz, n_heads, from_seq_len//from_block_size-4, n_rand_blocks*to_block_size, -1]
context_layer += jnp.einsum(
"bhlqk,bhlkd->bhlqd",
attn_weights[:, :, :, :, 4 * to_block_size : -to_block_size],
gathered_value[:, :, 1:-1],
)
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
# adding contribution of global keys
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
context_layer += jnp.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, :to_block_size], blocked_value_matrix[:, :, 0]
)
# [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, to_block_size] x [bsz, n_heads, to_block_size, -1]
# ==> [bsz, n_heads, from_seq_len//from_block_size-4, from_block_size, -1]
context_layer += jnp.einsum(
"bhlqk,bhkd->bhlqd", attn_weights[:, :, :, :, -to_block_size:], blocked_value_matrix[:, :, -1]
)
# 4th PART
# last 2nd token attention scores
# q[-2] x (sliding_keys, random_keys, global_keys)
# sliding key blocks -> last 3 blocks
# global key block -> 1st block
# random key block -> based on indices stored in `randn_attn`
second_last_key_mat = jnp.concatenate(
[
blocked_key_matrix[:, :, 0],
blocked_key_matrix[:, :, -3],
blocked_key_matrix[:, :, -2],
blocked_key_matrix[:, :, -1],
gathered_key[:, :, -1],
],
axis=2,
) # [bsz, n_heads, (4+n_random_blocks)*to_block_size, -1]
second_last_value_mat = jnp.concatenate(
[
blocked_value_matrix[:, :, 0],
blocked_value_matrix[:, :, -3],
blocked_value_matrix[:, :, -2],
blocked_value_matrix[:, :, -1],
gathered_value[:, :, -1],
],
axis=2,
) # [bsz, n_heads, (4+r)*to_block_size, -1]
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
second_last_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, -2], second_last_key_mat)
second_last_seq_pad = jnp.concatenate(
[
to_mask[:, :, :, :to_block_size],
to_mask[:, :, :, -3 * to_block_size :],
jnp.ones([bsz, 1, 1, n_rand_blocks * to_block_size], dtype=to_mask.dtype),
],
axis=3,
)
second_last_rand_pad = jnp.concatenate(
[
jnp.ones([bsz, n_heads, from_block_size, 4 * to_block_size], dtype=rand_mask.dtype),
rand_mask[:, :, -1],
],
axis=3,
)
second_last_product = second_last_product * rsqrt_d
second_last_product += (1.0 - jnp.minimum(second_last_seq_pad, second_last_rand_pad)) * attn_mask_penalty
second_last_attn_weights = jax.nn.softmax(
second_last_product, axis=-1
) # [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size]
# [bsz, n_heads, from_block_size, (4+n_rand_blocks)*to_block_size] x [bsz, n_heads, (4+n_rand_blocks)*to_block_size, -1]
# ==> [bsz, n_heads, from_block_size, -1]
second_last_context_layer = jnp.einsum("bhqk,bhkd->bhqd", second_last_attn_weights, second_last_value_mat)
second_last_context_layer = jnp.expand_dims(second_last_context_layer, 2)
# 5th PART
# last block (global) attention scores
# q[-1] x (k[0], k[1], k[2], k[3], .... )
# [bsz, n_heads, from_block_size, -1] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, to_seq_len]
last_product = jnp.einsum("bhqd,bhkd->bhqk", blocked_query_matrix[:, :, -1], key_layer)
last_product = last_product * rsqrt_d
last_product += (1.0 - to_mask) * attn_mask_penalty
last_attn_weights = jax.nn.softmax(last_product, axis=-1) # [bsz, n_heads, from_block_size, n]
# [bsz, n_heads, from_block_size, to_seq_len] x [bsz, n_heads, to_seq_len, -1] ==> [bsz, n_heads, from_block_size, -1]
last_context_layer = jnp.einsum("bhqk,bhkd->bhqd", last_attn_weights, value_layer)
last_context_layer = jnp.expand_dims(last_context_layer, 2)
# combining representations of all tokens
context_layer = jnp.concatenate(
[first_context_layer, second_context_layer, context_layer, second_last_context_layer, last_context_layer],
axis=2,
)
context_layer = context_layer.reshape(bsz, n_heads, from_seq_len, -1) * from_mask
context_layer = jnp.transpose(context_layer, axes=(0, 2, 1, 3)).reshape(bsz, from_seq_len, -1)
attention_probs = None
return context_layer, attention_probs
@staticmethod
def jax_gather(params, indices, batch_dims=2):
"""
Gather the indices from params correctly (equivalent to tf.gather but with modifications)
Args:
params: (bsz, n_heads, num_blocks, block_size, head_dim)
indices: (<num_blocks, 1)
"""
def _jax_gather(params, indices):
return params[indices]
for _ in range(batch_dims):
_jax_gather = jax.vmap(_jax_gather, in_axes=(0, 0))
return _jax_gather(params, indices) # params.shape[:batch_dims] + indices.shape + params.shape[batch_dims+1:]
def _create_rand_mask_from_inputs(
self,
from_blocked_mask,
to_blocked_mask,
broadcasted_rand_attn,
num_attention_heads,
num_random_blocks,
batch_size,
from_seq_length,
from_block_size,
):
"""
Create 3D attention mask from a 2D tensor mask.
Args:
from_blocked_mask: 2D Tensor of shape [batch_size, from_seq_length//from_block_size, from_block_size].
to_blocked_mask: int32 Tensor of shape [batch_size, to_seq_length//to_block_size, to_block_size].
broadcasted_rand_attn:
[batch_size, num_attention_heads, from_seq_length//from_block_size-2, num_rand_blocks]
num_attention_heads: int. Number of attention heads.
num_random_blocks: int. Number of random chunks per row.
batch_size: int. Batch size for computation.
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
Returns:
float Tensor of shape [batch_size, num_attention_heads, from_seq_length//from_block_size-2,
from_block_size, num_rand_blocks*to_block_size].
"""
num_windows = from_seq_length // from_block_size - 2
rand_mask = self.jax_gather(to_blocked_mask, broadcasted_rand_attn, batch_dims=1)
rand_mask = rand_mask.reshape(
batch_size, num_attention_heads, num_windows, num_random_blocks * from_block_size
)
rand_mask = jnp.einsum("blq,bhlk->bhlqk", from_blocked_mask[:, 1:-1], rand_mask)
return rand_mask
@staticmethod
def _get_rand_attn_plan(from_seq_length, from_block_size, num_rand_blocks):
"""
Gives the plan of where to put random attention.
Args:
from_seq_length: int. length of from sequence.
from_block_size: int. size of block in from sequence.
num_rand_blocks: int. Number of random chunks per row.
Returns:
plan_from_length: ending location of from block plan_num_rand_blocks: number of random ending location for
each block
"""
plan_from_length = []
plan_num_rand_blocks = []
if (2 * num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((2 * num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(0)
elif (num_rand_blocks + 5) < (from_seq_length // from_block_size):
plan_from_length.append(int((num_rand_blocks + 5) * from_block_size))
plan_num_rand_blocks.append(num_rand_blocks // 2)
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks - (num_rand_blocks // 2))
else:
plan_from_length.append(from_seq_length)
plan_num_rand_blocks.append(num_rand_blocks)
return plan_from_length, plan_num_rand_blocks
@staticmethod
def _bigbird_block_rand_mask(
from_seq_length, to_seq_length, from_block_size, to_block_size, num_rand_blocks, last_idx=-1
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_rand_blocks: int. Number of random chunks per row.
last_idx: if -1 then num_rand_blocks blocks chosen anywhere in to sequence,
if positive then num_rand_blocks blocks chosen only up to last_idx.
Returns:
adjacency list of size from_seq_length//from_block_size-2 by num_rand_blocks
"""
# using this method when from_seq_length in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
rand_attn = np.zeros((from_seq_length // from_block_size - 2, num_rand_blocks), dtype=np.int32)
middle_seq = np.arange(1, to_seq_length // to_block_size - 1, dtype=np.int32)
last = to_seq_length // to_block_size - 1
if last_idx > (2 * to_block_size):
last = (last_idx // to_block_size) - 1
r = num_rand_blocks # shorthand
for i in range(1, from_seq_length // from_block_size - 1):
start = i - 2
end = i
if i == 1:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[2:last])[:r]
elif i == 2:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[3:last])[:r]
elif i == from_seq_length // from_block_size - 3:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:last])[:r]
# Missing -3: should have been sliced till last-3
elif i == from_seq_length // from_block_size - 2:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:last])[:r]
# Missing -4: should have been sliced till last-4
else:
if start > last:
start = last
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:start])[:r]
elif (end + 1) == last:
rand_attn[i - 1, :] = np.random.permutation(middle_seq[:start])[:r]
else:
rand_attn[i - 1, :] = np.random.permutation(
np.concatenate((middle_seq[:start], middle_seq[end + 1 : last]))
)[:r]
return rand_attn
def _bigbird_block_rand_mask_with_head(
self,
from_seq_length,
to_seq_length,
from_block_size,
to_block_size,
num_heads,
plan_from_length,
plan_num_rand_blocks,
window_block_left=1,
window_block_right=1,
global_block_top=1,
global_block_bottom=1,
global_block_left=1,
global_block_right=1,
):
"""
Create adjacency list of random attention.
Args:
from_seq_length: int. length of from sequence.
to_seq_length: int. length of to sequence.
from_block_size: int. size of block in from sequence.
to_block_size: int. size of block in to sequence.
num_heads: int. total number of heads.
plan_from_length: list. plan from length where num_random_blocks are choosen from.
plan_num_rand_blocks: list. number of rand blocks within the plan.
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_top: int. number of blocks at the top.
global_block_bottom: int. number of blocks at the bottom.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
adjacency list of size num_head where each element is of size from_seq_length//from_block_size-2 by
num_rand_blocks
"""
# using this method when from_seq_length not in [1024, 3072, 4096]
if from_seq_length // from_block_size != to_seq_length // to_block_size:
raise ValueError("Error the number of blocks needs to be same!")
if from_seq_length not in plan_from_length:
raise ValueError("Error from sequence length not in plan!")
# Total number of blocks in the mmask
num_blocks = from_seq_length // from_block_size
# Number of blocks per plan
plan_block_length = np.array(plan_from_length) // from_block_size
# till when to follow plan
max_plan_idx = plan_from_length.index(from_seq_length)
# Random Attention adjacency list
rand_attn = [
np.zeros((num_blocks, np.sum(plan_num_rand_blocks[: max_plan_idx + 1])), dtype=np.int32)
for i in range(num_heads)
]
# We will go iteratively over the plan blocks and pick random number of
# Attention blocks from the legally allowed blocks
for plan_idx in range(max_plan_idx + 1):
rnd_r_cnt = 0
if plan_idx > 0:
# set the row for all from_blocks starting from 0 to
# plan_block_length[plan_idx-1]
# column indx start fromm plan_block_length[plan_idx-1] and ends at
# plan_block_length[plan_idx]
if plan_num_rand_blocks[plan_idx] > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:plan_idx]))
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: plan_idx + 1]))
for blk_rw_idx in range(global_block_top, plan_block_length[plan_idx - 1]):
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=plan_block_length[plan_idx - 1],
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
for pl_id in range(plan_idx):
if plan_num_rand_blocks[pl_id] == 0:
continue
for blk_rw_idx in range(plan_block_length[plan_idx - 1], plan_block_length[plan_idx]):
rnd_r_cnt = 0
to_start_block_id = 0
if pl_id > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:pl_id]))
to_start_block_id = plan_block_length[pl_id - 1]
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: pl_id + 1]))
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[pl_id],
num_rand_blocks=plan_num_rand_blocks[pl_id],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
if plan_num_rand_blocks[plan_idx] == 0:
continue
curr_r_cnt = int(np.sum(plan_num_rand_blocks[: plan_idx + 1]))
from_start_block_id = global_block_top
to_start_block_id = 0
if plan_idx > 0:
rnd_r_cnt = int(np.sum(plan_num_rand_blocks[:plan_idx]))
from_start_block_id = plan_block_length[plan_idx - 1]
to_start_block_id = plan_block_length[plan_idx - 1]
for blk_rw_idx in range(from_start_block_id, plan_block_length[plan_idx]):
for h in range(num_heads):
rand_attn[h][blk_rw_idx, rnd_r_cnt:curr_r_cnt] = self._get_single_block_row_attention(
block_id=blk_rw_idx,
to_start_block_id=to_start_block_id,
to_end_block_id=plan_block_length[plan_idx],
num_rand_blocks=plan_num_rand_blocks[plan_idx],
window_block_left=window_block_left,
window_block_right=window_block_right,
global_block_left=global_block_left,
global_block_right=global_block_right,
)
for nh in range(num_heads):
rand_attn[nh] = rand_attn[nh][global_block_top : num_blocks - global_block_bottom, :]
return rand_attn
@staticmethod
def _get_single_block_row_attention(
block_id,
to_start_block_id,
to_end_block_id,
num_rand_blocks,
window_block_left=1,
window_block_right=1,
global_block_left=1,
global_block_right=1,
):
"""
For a single row block get random row attention.
Args:
block_id: int. block id of row.
to_start_block_id: int. random attention column start id.
to_end_block_id: int. random attention column end id.
num_rand_blocks: int. number of random blocks to be selected.
window_block_left: int. number of blocks of window to left of a block.
window_block_right: int. number of blocks of window to right of a block.
global_block_left: int. Number of blocks globally used to the left.
global_block_right: int. Number of blocks globally used to the right.
Returns:
row containing the random attention vector of size num_rand_blocks.
"""
# list of to_blocks from which to choose random attention
to_block_list = np.arange(to_start_block_id, to_end_block_id, dtype=np.int32)
# permute the blocks
perm_block = np.random.permutation(to_block_list)
# illegal blocks for the current block id, using window
illegal_blocks = list(range(block_id - window_block_left, block_id + window_block_right + 1))
# Add blocks at the start and at the end
illegal_blocks.extend(list(range(global_block_left)))
illegal_blocks.extend(list(range(to_end_block_id - global_block_right, to_end_block_id)))
# The second from_block cannot choose random attention on second last to_block
if block_id == 1:
illegal_blocks.append(to_end_block_id - 2)
# The second last from_block cannot choose random attention on second to_block
if block_id == to_end_block_id - 2:
illegal_blocks.append(1)
selected_random_blokcs = []
for i in range(to_end_block_id - to_start_block_id):
if perm_block[i] not in illegal_blocks:
selected_random_blokcs.append(perm_block[i])
if len(selected_random_blokcs) == num_rand_blocks:
break
return np.array(selected_random_blokcs, dtype=np.int32)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertSelfOutput with Bert->BigBird
class FlaxBigBirdSelfOutput(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
def __call__(self, hidden_states, input_tensor, deterministic: bool = True):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.LayerNorm(hidden_states + input_tensor)
return hidden_states
class FlaxBigBirdAttention(nn.Module):
config: BigBirdConfig
layer_id: int = None
causal: bool = False
dtype: jnp.dtype = jnp.float32
def setup(self):
if self.config.attention_type == "original_full":
self.self = FlaxBigBirdSelfAttention(self.config, causal=self.causal, dtype=self.dtype)
elif self.config.attention_type == "block_sparse":
self.self = FlaxBigBirdBlockSparseAttention(self.config, block_sparse_seed=self.layer_id, dtype=self.dtype)
else:
raise ValueError(
f"Your `config.attention_type` is {self.config.attention_type} but it can either be `original_full` or"
" `block_sparse`"
)
self.output = FlaxBigBirdSelfOutput(self.config, dtype=self.dtype)
def __call__(
self,
hidden_states,
attention_mask,
layer_head_mask,
key_value_states=None,
init_cache=False,
deterministic=True,
output_attentions: bool = False,
):
# Attention mask comes in as attention_mask.shape == (*batch_sizes, kv_length)
# FLAX expects: attention_mask.shape == (*batch_sizes, 1, 1, kv_length) such that it is broadcastable
# with attn_weights.shape == (*batch_sizes, num_heads, q_length, kv_length)
if self.config.attention_type == "original_full":
attn_outputs = self.self(
hidden_states,
attention_mask,
layer_head_mask=layer_head_mask,
key_value_states=key_value_states,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
)
else:
attn_outputs = self.self(
hidden_states,
attention_mask,
deterministic=deterministic,
output_attentions=output_attentions,
)
attn_output = attn_outputs[0]
hidden_states = self.output(attn_output, hidden_states, deterministic=deterministic)
outputs = (hidden_states,)
if output_attentions:
outputs += (attn_outputs[1],)
return outputs
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertIntermediate with Bert->BigBird
class FlaxBigBirdIntermediate(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.intermediate_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.activation = ACT2FN[self.config.hidden_act]
def __call__(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.activation(hidden_states)
return hidden_states
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertOutput with Bert->BigBird
class FlaxBigBirdOutput(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.dense = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
def __call__(self, hidden_states, attention_output, deterministic: bool = True):
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
hidden_states = self.LayerNorm(hidden_states + attention_output)
return hidden_states
class FlaxBigBirdLayer(nn.Module):
config: BigBirdConfig
layer_id: int = None
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
def setup(self):
self.attention = FlaxBigBirdAttention(
self.config, layer_id=self.layer_id, causal=self.config.is_decoder, dtype=self.dtype
)
self.intermediate = FlaxBigBirdIntermediate(self.config, dtype=self.dtype)
self.output = FlaxBigBirdOutput(self.config, dtype=self.dtype)
if self.config.add_cross_attention:
self.crossattention = FlaxBigBirdAttention(self.config, causal=False, dtype=self.dtype)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertLayer.__call__ with Bert->BigBird
def __call__(
self,
hidden_states,
attention_mask,
layer_head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
):
# Self Attention
attention_outputs = self.attention(
hidden_states,
attention_mask,
layer_head_mask=layer_head_mask,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
)
attention_output = attention_outputs[0]
# Cross-Attention Block
if encoder_hidden_states is not None:
cross_attention_outputs = self.crossattention(
attention_output,
attention_mask=encoder_attention_mask,
layer_head_mask=layer_head_mask,
key_value_states=encoder_hidden_states,
deterministic=deterministic,
output_attentions=output_attentions,
)
attention_output = cross_attention_outputs[0]
hidden_states = self.intermediate(attention_output)
hidden_states = self.output(hidden_states, attention_output, deterministic=deterministic)
outputs = (hidden_states,)
if output_attentions:
outputs += (attention_outputs[1],)
if encoder_hidden_states is not None:
outputs += (cross_attention_outputs[1],)
return outputs
class FlaxBigBirdLayerCollection(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
if self.gradient_checkpointing:
FlaxBigBirdCheckpointLayer = remat(FlaxBigBirdLayer, static_argnums=(5, 6, 7))
self.layers = [
FlaxBigBirdCheckpointLayer(self.config, layer_id=i, name=str(i), dtype=self.dtype)
for i in range(self.config.num_hidden_layers)
]
else:
self.layers = [
FlaxBigBirdLayer(self.config, layer_id=i, name=str(i), dtype=self.dtype)
for i in range(self.config.num_hidden_layers)
]
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertLayerCollection.__call__ with Bert->BigBird
def __call__(
self,
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
all_attentions = () if output_attentions else None
all_hidden_states = () if output_hidden_states else None
all_cross_attentions = () if (output_attentions and encoder_hidden_states is not None) else None
# Check if head_mask has a correct number of layers specified if desired
if head_mask is not None:
if head_mask.shape[0] != (len(self.layers)):
raise ValueError(
f"The head_mask should be specified for {len(self.layers)} layers, but it is for "
f" {head_mask.shape[0]}."
)
for i, layer in enumerate(self.layers):
if output_hidden_states:
all_hidden_states += (hidden_states,)
layer_outputs = layer(
hidden_states,
attention_mask,
head_mask[i] if head_mask is not None else None,
encoder_hidden_states,
encoder_attention_mask,
init_cache,
deterministic,
output_attentions,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_attentions += (layer_outputs[1],)
if encoder_hidden_states is not None:
all_cross_attentions += (layer_outputs[2],)
if output_hidden_states:
all_hidden_states += (hidden_states,)
outputs = (hidden_states, all_hidden_states, all_attentions, all_cross_attentions)
if not return_dict:
return tuple(v for v in outputs if v is not None)
return FlaxBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertEncoder with Bert->BigBird
class FlaxBigBirdEncoder(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
gradient_checkpointing: bool = False
def setup(self):
self.layer = FlaxBigBirdLayerCollection(
self.config,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
def __call__(
self,
hidden_states,
attention_mask,
head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
return self.layer(
hidden_states,
attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertPredictionHeadTransform with Bert->BigBird
class FlaxBigBirdPredictionHeadTransform(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.dense = nn.Dense(self.config.hidden_size, dtype=self.dtype)
self.activation = ACT2FN[self.config.hidden_act]
self.LayerNorm = nn.LayerNorm(epsilon=self.config.layer_norm_eps, dtype=self.dtype)
def __call__(self, hidden_states):
hidden_states = self.dense(hidden_states)
hidden_states = self.activation(hidden_states)
return self.LayerNorm(hidden_states)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertLMPredictionHead with Bert->BigBird
class FlaxBigBirdLMPredictionHead(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
bias_init: Callable[..., np.ndarray] = jax.nn.initializers.zeros
def setup(self):
self.transform = FlaxBigBirdPredictionHeadTransform(self.config, dtype=self.dtype)
self.decoder = nn.Dense(self.config.vocab_size, dtype=self.dtype, use_bias=False)
self.bias = self.param("bias", self.bias_init, (self.config.vocab_size,))
def __call__(self, hidden_states, shared_embedding=None):
hidden_states = self.transform(hidden_states)
if shared_embedding is not None:
hidden_states = self.decoder.apply({"params": {"kernel": shared_embedding.T}}, hidden_states)
else:
hidden_states = self.decoder(hidden_states)
bias = jnp.asarray(self.bias, self.dtype)
hidden_states += bias
return hidden_states
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertOnlyMLMHead with Bert->BigBird
class FlaxBigBirdOnlyMLMHead(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.predictions = FlaxBigBirdLMPredictionHead(self.config, dtype=self.dtype)
def __call__(self, hidden_states, shared_embedding=None):
hidden_states = self.predictions(hidden_states, shared_embedding=shared_embedding)
return hidden_states
class FlaxBigBirdPreTrainingHeads(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.predictions = FlaxBigBirdLMPredictionHead(self.config, dtype=self.dtype)
self.seq_relationship = nn.Dense(2, dtype=self.dtype)
def __call__(self, hidden_states, pooled_output, shared_embedding=None):
prediction_scores = self.predictions(hidden_states, shared_embedding=shared_embedding)
seq_relationship_score = self.seq_relationship(pooled_output)
return prediction_scores, seq_relationship_score
class FlaxBigBirdPreTrainedModel(FlaxPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = BigBirdConfig
base_model_prefix = "bert"
module_class: nn.Module = None
def __init__(
self,
config: BigBirdConfig,
input_shape: Optional[tuple] = None,
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
gradient_checkpointing: bool = False,
**kwargs,
):
module = self.module_class(config=config, dtype=dtype, gradient_checkpointing=gradient_checkpointing, **kwargs)
if config.attention_type == "block_sparse" and input_shape is None:
input_shape = (1, 12 * config.block_size)
elif input_shape is None:
input_shape = (1, 1)
super().__init__(config, module, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertPreTrainedModel.enable_gradient_checkpointing
def enable_gradient_checkpointing(self):
self._module = self.module_class(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=True,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertPreTrainedModel.init_weights
def init_weights(self, rng: jax.random.PRNGKey, input_shape: Tuple, params: FrozenDict = None) -> FrozenDict:
# init input tensors
input_ids = jnp.zeros(input_shape, dtype="i4")
token_type_ids = jnp.zeros_like(input_ids)
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_shape)
attention_mask = jnp.ones_like(input_ids)
head_mask = jnp.ones((self.config.num_hidden_layers, self.config.num_attention_heads))
params_rng, dropout_rng = jax.random.split(rng)
rngs = {"params": params_rng, "dropout": dropout_rng}
if self.config.add_cross_attention:
encoder_hidden_states = jnp.zeros(input_shape + (self.config.hidden_size,))
encoder_attention_mask = attention_mask
module_init_outputs = self.module.init(
rngs,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
encoder_hidden_states,
encoder_attention_mask,
return_dict=False,
)
else:
module_init_outputs = self.module.init(
rngs, input_ids, attention_mask, token_type_ids, position_ids, head_mask, return_dict=False
)
random_params = module_init_outputs["params"]
if params is not None:
random_params = flatten_dict(unfreeze(random_params))
params = flatten_dict(unfreeze(params))
for missing_key in self._missing_keys:
params[missing_key] = random_params[missing_key]
self._missing_keys = set()
return freeze(unflatten_dict(params))
else:
return random_params
# Copied from transformers.models.bart.modeling_flax_bart.FlaxBartDecoderPreTrainedModel.init_cache
def init_cache(self, batch_size, max_length):
r"""
Args:
batch_size (`int`):
batch_size used for fast auto-regressive decoding. Defines the batch size of the initialized cache.
max_length (`int`):
maximum possible length for auto-regressive decoding. Defines the sequence length of the initialized
cache.
"""
# init input variables to retrieve cache
input_ids = jnp.ones((batch_size, max_length), dtype="i4")
attention_mask = jnp.ones_like(input_ids, dtype="i4")
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
init_variables = self.module.init(
jax.random.PRNGKey(0), input_ids, attention_mask, position_ids, return_dict=False, init_cache=True
)
return unfreeze(init_variables["cache"])
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertPreTrainedModel.__call__ with Bert->BigBird
def __call__(
self,
input_ids,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
encoder_hidden_states=None,
encoder_attention_mask=None,
params: dict = None,
dropout_rng: jax.random.PRNGKey = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
past_key_values: dict = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
# init input tensors if not passed
if token_type_ids is None:
token_type_ids = jnp.zeros_like(input_ids)
if position_ids is None:
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if head_mask is None:
head_mask = jnp.ones((self.config.num_hidden_layers, self.config.num_attention_heads))
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
inputs = {"params": params or self.params}
if self.config.add_cross_attention:
# if past_key_values are passed then cache is already initialized a private flag init_cache has to be passed
# down to ensure cache is used. It has to be made sure that cache is marked as mutable so that it can be
# changed by FlaxBigBirdAttention module
if past_key_values:
inputs["cache"] = past_key_values
mutable = ["cache"]
else:
mutable = False
outputs = self.module.apply(
inputs,
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
token_type_ids=jnp.array(token_type_ids, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
head_mask=jnp.array(head_mask, dtype="i4"),
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
deterministic=not train,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
rngs=rngs,
mutable=mutable,
)
# add updated cache to model output
if past_key_values is not None and return_dict:
outputs, past_key_values = outputs
outputs["past_key_values"] = unfreeze(past_key_values["cache"])
return outputs
elif past_key_values is not None and not return_dict:
outputs, past_key_values = outputs
outputs = outputs[:1] + (unfreeze(past_key_values["cache"]),) + outputs[1:]
else:
outputs = self.module.apply(
inputs,
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
token_type_ids=jnp.array(token_type_ids, dtype="i4"),
position_ids=jnp.array(position_ids, dtype="i4"),
head_mask=jnp.array(head_mask, dtype="i4"),
deterministic=not train,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
rngs=rngs,
)
return outputs
class FlaxBigBirdModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32 # the dtype of the computation
add_pooling_layer: bool = True
gradient_checkpointing: bool = False
def setup(self):
self.embeddings = FlaxBigBirdEmbeddings(self.config, dtype=self.dtype)
self.encoder = FlaxBigBirdEncoder(
self.config, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.pooler = nn.Dense(
self.config.hidden_size,
kernel_init=jax.nn.initializers.normal(self.config.initializer_range),
dtype=self.dtype,
)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
hidden_states = self.embeddings(
input_ids, token_type_ids, position_ids, attention_mask, deterministic=deterministic
)
outputs = self.encoder(
hidden_states,
attention_mask,
head_mask=head_mask,
deterministic=deterministic,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
init_cache=init_cache,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
pooled = nn.tanh(self.pooler(hidden_states[:, 0, :])) if self.add_pooling_layer else None
if not return_dict:
# if pooled is None, don't return it
if pooled is None:
return (hidden_states,) + outputs[1:]
return (hidden_states, pooled) + outputs[1:]
return FlaxBaseModelOutputWithPoolingAndCrossAttentions(
last_hidden_state=hidden_states,
pooler_output=pooled,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
@add_start_docstrings(
"The bare BigBird Model transformer outputting raw hidden-states without any specific head on top.",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertModel with Bert->BigBird
class FlaxBigBirdModel(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdModule
append_call_sample_docstring(FlaxBigBirdModel, _CHECKPOINT_FOR_DOC, FlaxBaseModelOutputWithPooling, _CONFIG_FOR_DOC)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForPreTrainingModule with Bert->BigBird
class FlaxBigBirdForPreTrainingModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.cls = FlaxBigBirdPreTrainingHeads(config=self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
if self.config.tie_word_embeddings:
shared_embedding = self.bert.variables["params"]["embeddings"]["word_embeddings"]["embedding"]
else:
shared_embedding = None
hidden_states = outputs[0]
pooled_output = outputs[1]
prediction_scores, seq_relationship_score = self.cls(
hidden_states, pooled_output, shared_embedding=shared_embedding
)
if not return_dict:
return (prediction_scores, seq_relationship_score) + outputs[2:]
return FlaxBigBirdForPreTrainingOutput(
prediction_logits=prediction_scores,
seq_relationship_logits=seq_relationship_score,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with two heads on top as done during the pretraining: a `masked language modeling` head and a `next
sentence prediction (classification)` head.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForPreTraining with Bert->BigBird
class FlaxBigBirdForPreTraining(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForPreTrainingModule
FLAX_BIG_BIRD_FOR_PRETRAINING_DOCSTRING = """
Returns:
Example:
```python
>>> from transformers import AutoTokenizer, FlaxBigBirdForPreTraining
>>> tokenizer = AutoTokenizer.from_pretrained("google/bigbird-roberta-base")
>>> model = FlaxBigBirdForPreTraining.from_pretrained("google/bigbird-roberta-base")
>>> inputs = tokenizer("Hello, my dog is cute", return_tensors="np")
>>> outputs = model(**inputs)
>>> prediction_logits = outputs.prediction_logits
>>> seq_relationship_logits = outputs.seq_relationship_logits
```
"""
overwrite_call_docstring(
FlaxBigBirdForPreTraining,
BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length") + FLAX_BIG_BIRD_FOR_PRETRAINING_DOCSTRING,
)
append_replace_return_docstrings(
FlaxBigBirdForPreTraining, output_type=FlaxBigBirdForPreTrainingOutput, config_class=_CONFIG_FOR_DOC
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForMaskedLMModule with Bert->BigBird
class FlaxBigBirdForMaskedLMModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
add_pooling_layer=False,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.cls = FlaxBigBirdOnlyMLMHead(config=self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = self.bert.variables["params"]["embeddings"]["word_embeddings"]["embedding"]
else:
shared_embedding = None
# Compute the prediction scores
logits = self.cls(hidden_states, shared_embedding=shared_embedding)
if not return_dict:
return (logits,) + outputs[1:]
return FlaxMaskedLMOutput(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings("""BigBird Model with a `language modeling` head on top.""", BIG_BIRD_START_DOCSTRING)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForMaskedLM with Bert->BigBird
class FlaxBigBirdForMaskedLM(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForMaskedLMModule
append_call_sample_docstring(FlaxBigBirdForMaskedLM, _CHECKPOINT_FOR_DOC, FlaxMaskedLMOutput, _CONFIG_FOR_DOC)
class FlaxBigBirdClassificationHead(nn.Module):
"""Head for sentence-level classification tasks."""
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.dense = nn.Dense(self.config.hidden_size, dtype=self.dtype)
classifier_dropout = (
self.config.classifier_dropout
if self.config.classifier_dropout is not None
else self.config.hidden_dropout_prob
)
self.dropout = nn.Dropout(classifier_dropout)
self.out_proj = nn.Dense(self.config.num_labels, dtype=self.dtype)
def __call__(self, features, deterministic=True):
x = features[:, 0, :] # take <s> token (equiv. to [CLS])
x = self.dropout(x, deterministic=deterministic)
x = self.dense(x)
x = ACT2FN[self.config.hidden_act](x)
x = self.dropout(x, deterministic=deterministic)
x = self.out_proj(x)
return x
class FlaxBigBirdForSequenceClassificationModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config, dtype=self.dtype, gradient_checkpointing=self.gradient_checkpointing
)
self.classifier = FlaxBigBirdClassificationHead(self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
logits = self.classifier(sequence_output, deterministic=deterministic)
if not return_dict:
return (logits,) + outputs[2:]
return FlaxSequenceClassifierOutput(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model transformer with a sequence classification/regression head on top (a linear layer on top of the
pooled output) e.g. for GLUE tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForSequenceClassification with Bert->BigBird
class FlaxBigBirdForSequenceClassification(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForSequenceClassificationModule
append_call_sample_docstring(
FlaxBigBirdForSequenceClassification,
_CHECKPOINT_FOR_DOC,
FlaxSequenceClassifierOutput,
_CONFIG_FOR_DOC,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForMultipleChoiceModule with Bert->BigBird
class FlaxBigBirdForMultipleChoiceModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
self.classifier = nn.Dense(1, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
num_choices = input_ids.shape[1]
input_ids = input_ids.reshape(-1, input_ids.shape[-1]) if input_ids is not None else None
attention_mask = attention_mask.reshape(-1, attention_mask.shape[-1]) if attention_mask is not None else None
token_type_ids = token_type_ids.reshape(-1, token_type_ids.shape[-1]) if token_type_ids is not None else None
position_ids = position_ids.reshape(-1, position_ids.shape[-1]) if position_ids is not None else None
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output, deterministic=deterministic)
logits = self.classifier(pooled_output)
reshaped_logits = logits.reshape(-1, num_choices)
if not return_dict:
return (reshaped_logits,) + outputs[2:]
return FlaxMultipleChoiceModelOutput(
logits=reshaped_logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
softmax) e.g. for RocStories/SWAG tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
class FlaxBigBirdForMultipleChoice(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForMultipleChoiceModule
def __init__(
self,
config: BigBirdConfig,
input_shape: Optional[tuple] = None,
seed: int = 0,
dtype: jnp.dtype = jnp.float32,
_do_init: bool = True,
**kwargs,
):
if config.attention_type == "block_sparse" and input_shape is None:
input_shape = (1, 1, 12 * config.block_size)
elif input_shape is None:
input_shape = (1, 1)
super().__init__(config, input_shape=input_shape, seed=seed, dtype=dtype, _do_init=_do_init)
overwrite_call_docstring(
FlaxBigBirdForMultipleChoice, BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length")
)
append_call_sample_docstring(
FlaxBigBirdForMultipleChoice,
_CHECKPOINT_FOR_DOC,
FlaxMultipleChoiceModelOutput,
_CONFIG_FOR_DOC,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForTokenClassificationModule with Bert->BigBird
class FlaxBigBirdForTokenClassificationModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
dtype=self.dtype,
add_pooling_layer=False,
gradient_checkpointing=self.gradient_checkpointing,
)
classifier_dropout = (
self.config.classifier_dropout
if self.config.classifier_dropout is not None
else self.config.hidden_dropout_prob
)
self.dropout = nn.Dropout(rate=classifier_dropout)
self.classifier = nn.Dense(self.config.num_labels, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
hidden_states = self.dropout(hidden_states, deterministic=deterministic)
logits = self.classifier(hidden_states)
if not return_dict:
return (logits,) + outputs[1:]
return FlaxTokenClassifierOutput(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
Named-Entity-Recognition (NER) tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForTokenClassification with Bert->BigBird
class FlaxBigBirdForTokenClassification(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForTokenClassificationModule
append_call_sample_docstring(
FlaxBigBirdForTokenClassification,
_CHECKPOINT_FOR_DOC,
FlaxTokenClassifierOutput,
_CONFIG_FOR_DOC,
)
class FlaxBigBirdForQuestionAnsweringHead(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
def setup(self):
self.dropout = nn.Dropout(rate=self.config.hidden_dropout_prob)
self.intermediate = FlaxBigBirdIntermediate(self.config, dtype=self.dtype)
self.output = FlaxBigBirdOutput(self.config, dtype=self.dtype)
self.qa_outputs = nn.Dense(self.config.num_labels, dtype=self.dtype)
def __call__(self, encoder_output, deterministic=True):
hidden_states = self.dropout(encoder_output, deterministic=deterministic)
hidden_states = self.intermediate(hidden_states)
hidden_states = self.output(hidden_states, encoder_output)
hidden_states = self.qa_outputs(hidden_states)
return hidden_states
class FlaxBigBirdForQuestionAnsweringModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
add_pooling_layer: bool = False
gradient_checkpointing: bool = False
def setup(self):
self.config.num_labels = 2
self.bert = FlaxBigBirdModule(
self.config,
dtype=self.dtype,
add_pooling_layer=self.add_pooling_layer,
gradient_checkpointing=self.gradient_checkpointing,
)
self.qa_classifier = FlaxBigBirdForQuestionAnsweringHead(self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
logits_mask=None,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
pooled_output = outputs[1] if self.add_pooling_layer else None
logits = self.qa_classifier(hidden_states, deterministic=deterministic)
if logits_mask is not None:
# removing question tokens from the competition
logits = logits - logits_mask * 1e6
start_logits, end_logits = logits.split(self.config.num_labels, axis=-1)
start_logits = start_logits.squeeze(-1)
end_logits = end_logits.squeeze(-1)
if not return_dict:
return (start_logits, end_logits) + outputs[1:]
return FlaxBigBirdForQuestionAnsweringModelOutput(
start_logits=start_logits,
end_logits=end_logits,
pooled_output=pooled_output,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
@add_start_docstrings(
"""
BigBird Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
""",
BIG_BIRD_START_DOCSTRING,
)
class FlaxBigBirdForQuestionAnswering(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForQuestionAnsweringModule
@add_start_docstrings_to_model_forward(BIG_BIRD_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
def __call__(
self,
input_ids,
attention_mask=None,
token_type_ids=None,
position_ids=None,
head_mask=None,
question_lengths=None,
params: dict = None,
dropout_rng: jax.random.PRNGKey = None,
train: bool = False,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
):
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.return_dict
if position_ids is None:
position_ids = jnp.broadcast_to(jnp.arange(jnp.atleast_2d(input_ids).shape[-1]), input_ids.shape)
if attention_mask is None:
attention_mask = jnp.ones_like(input_ids)
if head_mask is None:
head_mask = jnp.ones((self.config.num_hidden_layers, self.config.num_attention_heads))
if question_lengths is None and input_ids is not None:
# assuming input_ids format: <cls> <question> <sep> context <sep>
question_lengths = jnp.argmax((input_ids == self.config.sep_token_id).astype("i4"), axis=-1) + 1
question_lengths = jnp.expand_dims(question_lengths, axis=1)
seqlen = input_ids.shape[1]
logits_mask = None
if question_lengths is not None:
# setting lengths logits to `-inf`
logits_mask = self.prepare_question_mask(question_lengths, seqlen)
if token_type_ids is None:
token_type_ids = (~logits_mask).astype("i4")
logits_mask = jnp.expand_dims(logits_mask, axis=2)
logits_mask = logits_mask.at[:, 0].set(False)
# init input tensors if not passed
if token_type_ids is None:
token_type_ids = jnp.zeros_like(input_ids)
# Handle any PRNG if needed
rngs = {}
if dropout_rng is not None:
rngs["dropout"] = dropout_rng
return self.module.apply(
{"params": params or self.params},
jnp.array(input_ids, dtype="i4"),
jnp.array(attention_mask, dtype="i4"),
token_type_ids,
jnp.array(position_ids, dtype="i4"),
jnp.array(head_mask, dtype="i4"),
logits_mask,
not train,
output_attentions,
output_hidden_states,
return_dict,
rngs=rngs,
)
@staticmethod
def prepare_question_mask(q_lengths, maxlen: int):
# q_lengths -> (bz, 1)
mask = jnp.arange(0, maxlen)
mask = jnp.expand_dims(mask, axis=0) < q_lengths
return mask
append_call_sample_docstring(
FlaxBigBirdForQuestionAnswering,
_CHECKPOINT_FOR_DOC,
FlaxBigBirdForQuestionAnsweringModelOutput,
_CONFIG_FOR_DOC,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForCausalLMModule with Bert->BigBird
class FlaxBigBirdForCausalLMModule(nn.Module):
config: BigBirdConfig
dtype: jnp.dtype = jnp.float32
gradient_checkpointing: bool = False
def setup(self):
self.bert = FlaxBigBirdModule(
config=self.config,
add_pooling_layer=False,
dtype=self.dtype,
gradient_checkpointing=self.gradient_checkpointing,
)
self.cls = FlaxBigBirdOnlyMLMHead(config=self.config, dtype=self.dtype)
def __call__(
self,
input_ids,
attention_mask,
position_ids,
token_type_ids: Optional[jnp.ndarray] = None,
head_mask: Optional[jnp.ndarray] = None,
encoder_hidden_states: Optional[jnp.ndarray] = None,
encoder_attention_mask: Optional[jnp.ndarray] = None,
init_cache: bool = False,
deterministic: bool = True,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
):
# Model
outputs = self.bert(
input_ids,
attention_mask,
token_type_ids,
position_ids,
head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
init_cache=init_cache,
deterministic=deterministic,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
hidden_states = outputs[0]
if self.config.tie_word_embeddings:
shared_embedding = self.bert.variables["params"]["embeddings"]["word_embeddings"]["embedding"]
else:
shared_embedding = None
# Compute the prediction scores
logits = self.cls(hidden_states, shared_embedding=shared_embedding)
if not return_dict:
return (logits,) + outputs[1:]
return FlaxCausalLMOutputWithCrossAttentions(
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
cross_attentions=outputs.cross_attentions,
)
@add_start_docstrings(
"""
BigBird Model with a language modeling head on top (a linear layer on top of the hidden-states output) e.g for
autoregressive tasks.
""",
BIG_BIRD_START_DOCSTRING,
)
# Copied from transformers.models.bert.modeling_flax_bert.FlaxBertForCausalLM with Bert->BigBird
class FlaxBigBirdForCausalLM(FlaxBigBirdPreTrainedModel):
module_class = FlaxBigBirdForCausalLMModule
def prepare_inputs_for_generation(self, input_ids, max_length, attention_mask: Optional[jnp.DeviceArray] = None):
# initializing the cache
batch_size, seq_length = input_ids.shape
past_key_values = self.init_cache(batch_size, max_length)
# Note that usually one would have to put 0's in the attention_mask for x > input_ids.shape[-1] and x < cache_length.
# But since the decoder uses a causal mask, those positions are masked anyway.
# Thus, we can create a single static attention_mask here, which is more efficient for compilation
extended_attention_mask = jnp.ones((batch_size, max_length), dtype="i4")
if attention_mask is not None:
position_ids = attention_mask.cumsum(axis=-1) - 1
extended_attention_mask = lax.dynamic_update_slice(extended_attention_mask, attention_mask, (0, 0))
else:
position_ids = jnp.broadcast_to(jnp.arange(seq_length, dtype="i4")[None, :], (batch_size, seq_length))
return {
"past_key_values": past_key_values,
"attention_mask": extended_attention_mask,
"position_ids": position_ids,
}
def update_inputs_for_generation(self, model_outputs, model_kwargs):
model_kwargs["past_key_values"] = model_outputs.past_key_values
model_kwargs["position_ids"] = model_kwargs["position_ids"][:, -1:] + 1
return model_kwargs
append_call_sample_docstring(
FlaxBigBirdForCausalLM,
_CHECKPOINT_FOR_DOC,
FlaxCausalLMOutputWithCrossAttentions,
_CONFIG_FOR_DOC,
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,493 | src/transformers/models/big_bird/convert_bigbird_original_tf_checkpoint_to_pytorch.py | # coding=utf-8
# Copyright 2021 The HuggingFace Inc. team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Convert BigBird checkpoint."""
import argparse
from transformers import BigBirdConfig, BigBirdForPreTraining, BigBirdForQuestionAnswering, load_tf_weights_in_big_bird
from transformers.utils import logging
logging.set_verbosity_info()
def convert_tf_checkpoint_to_pytorch(tf_checkpoint_path, big_bird_config_file, pytorch_dump_path, is_trivia_qa):
# Initialise PyTorch model
config = BigBirdConfig.from_json_file(big_bird_config_file)
print(f"Building PyTorch model from configuration: {config}")
if is_trivia_qa:
model = BigBirdForQuestionAnswering(config)
else:
model = BigBirdForPreTraining(config)
# Load weights from tf checkpoint
load_tf_weights_in_big_bird(model, tf_checkpoint_path, is_trivia_qa=is_trivia_qa)
# Save pytorch-model
print(f"Save PyTorch model to {pytorch_dump_path}")
model.save_pretrained(pytorch_dump_path)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
# Required parameters
parser.add_argument(
"--tf_checkpoint_path", default=None, type=str, required=True, help="Path to the TensorFlow checkpoint path."
)
parser.add_argument(
"--big_bird_config_file",
default=None,
type=str,
required=True,
help=(
"The config json file corresponding to the pre-trained BERT model. \n"
"This specifies the model architecture."
),
)
parser.add_argument(
"--pytorch_dump_path", default=None, type=str, required=True, help="Path to the output PyTorch model."
)
parser.add_argument(
"--is_trivia_qa", action="store_true", help="Whether to convert a model with a trivia_qa head."
)
args = parser.parse_args()
convert_tf_checkpoint_to_pytorch(
args.tf_checkpoint_path, args.big_bird_config_file, args.pytorch_dump_path, args.is_trivia_qa
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 8,306 | src/transformers/models/big_bird/configuration_big_bird.py | # coding=utf-8
# Copyright 2021 Google Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
""" BigBird model configuration"""
from collections import OrderedDict
from typing import Mapping
from ...configuration_utils import PretrainedConfig
from ...onnx import OnnxConfig
from ...utils import logging
logger = logging.get_logger(__name__)
BIG_BIRD_PRETRAINED_CONFIG_ARCHIVE_MAP = {
"google/bigbird-roberta-base": "https://huggingface.co/google/bigbird-roberta-base/resolve/main/config.json",
"google/bigbird-roberta-large": "https://huggingface.co/google/bigbird-roberta-large/resolve/main/config.json",
"google/bigbird-base-trivia-itc": "https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/config.json",
# See all BigBird models at https://huggingface.co/models?filter=big_bird
}
class BigBirdConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`BigBirdModel`]. It is used to instantiate an
BigBird model according to the specified arguments, defining the model architecture. Instantiating a configuration
with the defaults will yield a similar configuration to that of the BigBird
[google/bigbird-roberta-base](https://huggingface.co/google/bigbird-roberta-base) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 50358):
Vocabulary size of the BigBird model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`BigBirdModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimension of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimension of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu_new"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probabilitiy for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 4096):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 1024 or 2048 or 4096).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed when calling [`BigBirdModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
is_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as a decoder or not. If `False`, the model is used as an encoder.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
attention_type (`str`, *optional*, defaults to `"block_sparse"`)
Whether to use block sparse attention (with n complexity) as introduced in paper or original attention
layer (with n^2 complexity). Possible values are `"original_full"` and `"block_sparse"`.
use_bias (`bool`, *optional*, defaults to `True`)
Whether to use bias in query, key, value.
rescale_embeddings (`bool`, *optional*, defaults to `False`)
Whether to rescale embeddings with (hidden_size ** 0.5).
block_size (`int`, *optional*, defaults to 64)
Size of each block. Useful only when `attention_type == "block_sparse"`.
num_random_blocks (`int`, *optional*, defaults to 3)
Each query is going to attend these many number of random blocks. Useful only when `attention_type ==
"block_sparse"`.
classifier_dropout (`float`, *optional*):
The dropout ratio for the classification head.
Example:
```python
>>> from transformers import BigBirdConfig, BigBirdModel
>>> # Initializing a BigBird google/bigbird-roberta-base style configuration
>>> configuration = BigBirdConfig()
>>> # Initializing a model (with random weights) from the google/bigbird-roberta-base style configuration
>>> model = BigBirdModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "big_bird"
def __init__(
self,
vocab_size=50358,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu_new",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=4096,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
use_cache=True,
pad_token_id=0,
bos_token_id=1,
eos_token_id=2,
sep_token_id=66,
attention_type="block_sparse",
use_bias=True,
rescale_embeddings=False,
block_size=64,
num_random_blocks=3,
classifier_dropout=None,
**kwargs,
):
super().__init__(
pad_token_id=pad_token_id,
bos_token_id=bos_token_id,
eos_token_id=eos_token_id,
sep_token_id=sep_token_id,
**kwargs,
)
self.vocab_size = vocab_size
self.max_position_embeddings = max_position_embeddings
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.type_vocab_size = type_vocab_size
self.layer_norm_eps = layer_norm_eps
self.use_cache = use_cache
self.rescale_embeddings = rescale_embeddings
self.attention_type = attention_type
self.use_bias = use_bias
self.block_size = block_size
self.num_random_blocks = num_random_blocks
self.classifier_dropout = classifier_dropout
class BigBirdOnnxConfig(OnnxConfig):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
if self.task == "multiple-choice":
dynamic_axis = {0: "batch", 1: "choice", 2: "sequence"}
else:
dynamic_axis = {0: "batch", 1: "sequence"}
return OrderedDict(
[
("input_ids", dynamic_axis),
("attention_mask", dynamic_axis),
]
)
|
27182812/ChatGLM-LLaMA-chinese-insturct | 14,686 | src/transformers/models/big_bird/tokenization_big_bird.py | # coding=utf-8
# Copyright 2021 Google Research and The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Tokenization classes for BigBird."""
import os
import re
from shutil import copyfile
from typing import Any, Dict, List, Optional, Tuple
import sentencepiece as spm
from ...tokenization_utils import AddedToken, PreTrainedTokenizer
from ...utils import logging
logger = logging.get_logger(__name__)
VOCAB_FILES_NAMES = {"vocab_file": "spiece.model"}
PRETRAINED_VOCAB_FILES_MAP = {
"vocab_file": {
"google/bigbird-roberta-base": "https://huggingface.co/google/bigbird-roberta-base/resolve/main/spiece.model",
"google/bigbird-roberta-large": (
"https://huggingface.co/google/bigbird-roberta-large/resolve/main/spiece.model"
),
"google/bigbird-base-trivia-itc": (
"https://huggingface.co/google/bigbird-base-trivia-itc/resolve/main/spiece.model"
),
}
}
PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES = {
"google/bigbird-roberta-base": 4096,
"google/bigbird-roberta-large": 4096,
"google/bigbird-base-trivia-itc": 4096,
}
class BigBirdTokenizer(PreTrainedTokenizer):
"""
Construct a BigBird tokenizer. Based on [SentencePiece](https://github.com/google/sentencepiece).
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods.
Args:
vocab_file (`str`):
[SentencePiece](https://github.com/google/sentencepiece) file (generally has a *.spm* extension) that
contains the vocabulary necessary to instantiate a tokenizer.
eos_token (`str`, *optional*, defaults to `"</s>"`):
The end of sequence token.
bos_token (`str`, *optional*, defaults to `"<s>"`):
The begin of sequence token.
unk_token (`str`, *optional*, defaults to `"<unk>"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
pad_token (`str`, *optional*, defaults to `"<pad>"`):
The token used for padding, for example when batching sequences of different lengths.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
sp_model_kwargs (`dict`, *optional*):
Will be passed to the `SentencePieceProcessor.__init__()` method. The [Python wrapper for
SentencePiece](https://github.com/google/sentencepiece/tree/master/python) can be used, among other things,
to set:
- `enable_sampling`: Enable subword regularization.
- `nbest_size`: Sampling parameters for unigram. Invalid for BPE-Dropout.
- `nbest_size = {0,1}`: No sampling is performed.
- `nbest_size > 1`: samples from the nbest_size results.
- `nbest_size < 0`: assuming that nbest_size is infinite and samples from the all hypothesis (lattice)
using forward-filtering-and-backward-sampling algorithm.
- `alpha`: Smoothing parameter for unigram sampling, and dropout probability of merge operations for
BPE-dropout.
"""
vocab_files_names = VOCAB_FILES_NAMES
pretrained_vocab_files_map = PRETRAINED_VOCAB_FILES_MAP
max_model_input_sizes = PRETRAINED_POSITIONAL_EMBEDDINGS_SIZES
model_input_names = ["input_ids", "attention_mask"]
prefix_tokens: List[int] = []
def __init__(
self,
vocab_file,
unk_token="<unk>",
bos_token="<s>",
eos_token="</s>",
pad_token="<pad>",
sep_token="[SEP]",
mask_token="[MASK]",
cls_token="[CLS]",
sp_model_kwargs: Optional[Dict[str, Any]] = None,
**kwargs,
) -> None:
bos_token = AddedToken(bos_token, lstrip=False, rstrip=False) if isinstance(bos_token, str) else bos_token
eos_token = AddedToken(eos_token, lstrip=False, rstrip=False) if isinstance(eos_token, str) else eos_token
unk_token = AddedToken(unk_token, lstrip=False, rstrip=False) if isinstance(unk_token, str) else unk_token
pad_token = AddedToken(pad_token, lstrip=False, rstrip=False) if isinstance(pad_token, str) else pad_token
cls_token = AddedToken(cls_token, lstrip=False, rstrip=False) if isinstance(cls_token, str) else cls_token
sep_token = AddedToken(sep_token, lstrip=False, rstrip=False) if isinstance(sep_token, str) else sep_token
# Mask token behave like a normal word, i.e. include the space before it
mask_token = AddedToken(mask_token, lstrip=True, rstrip=False) if isinstance(mask_token, str) else mask_token
self.sp_model_kwargs = {} if sp_model_kwargs is None else sp_model_kwargs
super().__init__(
bos_token=bos_token,
eos_token=eos_token,
unk_token=unk_token,
pad_token=pad_token,
sep_token=sep_token,
mask_token=mask_token,
cls_token=cls_token,
sp_model_kwargs=self.sp_model_kwargs,
**kwargs,
)
self.vocab_file = vocab_file
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(vocab_file)
@property
def vocab_size(self):
return self.sp_model.get_piece_size()
def get_vocab(self):
vocab = {self.convert_ids_to_tokens(i): i for i in range(self.vocab_size)}
vocab.update(self.added_tokens_encoder)
return vocab
def __getstate__(self):
state = self.__dict__.copy()
state["sp_model"] = None
return state
def __setstate__(self, d):
self.__dict__ = d
# for backward compatibility
if not hasattr(self, "sp_model_kwargs"):
self.sp_model_kwargs = {}
self.sp_model = spm.SentencePieceProcessor(**self.sp_model_kwargs)
self.sp_model.Load(self.vocab_file)
def _tokenize(self, text: str) -> List[str]:
"""Take as input a string and return a list of strings (tokens) for words/sub-words"""
return self.sp_model.encode(text, out_type=str)
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.sp_model.piece_to_id(token)
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
token = self.sp_model.IdToPiece(index)
return token
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
current_sub_tokens = []
out_string = ""
prev_is_special = False
for token in tokens:
# make sure that special tokens are not decoded using sentencepiece model
if token in self.all_special_tokens:
if not prev_is_special:
out_string += " "
out_string += self.sp_model.decode(current_sub_tokens) + token
prev_is_special = True
current_sub_tokens = []
else:
current_sub_tokens.append(token)
prev_is_special = False
out_string += self.sp_model.decode(current_sub_tokens)
return out_string.strip()
def _decode(
self,
token_ids: List[int],
skip_special_tokens: bool = False,
clean_up_tokenization_spaces: bool = True,
spaces_between_special_tokens: bool = True,
**kwargs,
) -> str:
self._decode_use_source_tokenizer = kwargs.pop("use_source_tokenizer", False)
filtered_tokens = self.convert_ids_to_tokens(token_ids, skip_special_tokens=skip_special_tokens)
# To avoid mixing byte-level and unicode for byte-level BPT
# we need to build string separately for added tokens and byte-level tokens
# cf. https://github.com/huggingface/transformers/issues/1133
sub_texts = []
current_sub_text = []
for token in filtered_tokens:
if skip_special_tokens and token in self.all_special_ids:
continue
if token in self.added_tokens_encoder:
if current_sub_text:
sub_texts.append(self.convert_tokens_to_string(current_sub_text))
current_sub_text = []
sub_texts.append(token)
else:
current_sub_text.append(token)
if current_sub_text:
sub_texts.append(self.convert_tokens_to_string(current_sub_text))
# Mimic the behavior of the Rust tokenizer:
# No space before [MASK] and [SEP]
if spaces_between_special_tokens:
text = re.sub(r" (\[(MASK|SEP)\])", r"\1", " ".join(sub_texts))
else:
text = "".join(sub_texts)
if clean_up_tokenization_spaces:
clean_text = self.clean_up_tokenization(text)
return clean_text
else:
return text
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
if not os.path.isdir(save_directory):
logger.error(f"Vocabulary path ({save_directory}) should be a directory")
return
out_vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
if os.path.abspath(self.vocab_file) != os.path.abspath(out_vocab_file) and os.path.isfile(self.vocab_file):
copyfile(self.vocab_file, out_vocab_file)
elif not os.path.isfile(self.vocab_file):
with open(out_vocab_file, "wb") as fi:
content_spiece_model = self.sp_model.serialized_model_proto()
fi.write(content_spiece_model)
return (out_vocab_file,)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a sequence or a pair of sequence for sequence classification tasks by concatenating and
adding special tokens. A Big Bird sequence has the following format:
- single sequence: `[CLS] X [SEP]`
- pair of sequences: `[CLS] A [SEP] B [SEP]`
Args:
token_ids_0 (`List[int]`):
List of IDs to which the special tokens will be added.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [input IDs](../glossary#input-ids) with the appropriate special tokens.
"""
if token_ids_1 is None:
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id]
cls = [self.cls_token_id]
sep = [self.sep_token_id]
return cls + token_ids_0 + sep + token_ids_1 + sep
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is None:
return [1] + ([0] * len(token_ids_0)) + [1]
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1)) + [1]
def create_token_type_ids_from_sequences(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Create a mask from the two sequences passed to be used in a sequence-pair classification task. A BERT sequence
pair mask has the following format: :: 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 | first sequence | second
sequence | If `token_ids_1` is `None`, this method only returns the first portion of the mask (0s).
Args:
token_ids_0 (`List[int]`):
List of IDs.
token_ids_1 (`List[int]`, *optional*):
Optional second list of IDs for sequence pairs.
Returns:
`List[int]`: List of [token type IDs](../glossary#token-type-ids) according to the given sequence(s).
"""
sep = [self.sep_token_id]
cls = [self.cls_token_id]
if token_ids_1 is None:
return len(cls + token_ids_0 + sep) * [0]
return len(cls + token_ids_0 + sep) * [0] + len(token_ids_1 + sep) * [1]
|
27182812/ChatGLM-LLaMA-chinese-insturct | 2,074 | src/transformers/models/yoso/__init__.py | # Copyright 2022 The HuggingFace Team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from typing import TYPE_CHECKING
from ...utils import OptionalDependencyNotAvailable, _LazyModule, is_tokenizers_available, is_torch_available
_import_structure = {"configuration_yoso": ["YOSO_PRETRAINED_CONFIG_ARCHIVE_MAP", "YosoConfig"]}
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
_import_structure["modeling_yoso"] = [
"YOSO_PRETRAINED_MODEL_ARCHIVE_LIST",
"YosoForMaskedLM",
"YosoForMultipleChoice",
"YosoForQuestionAnswering",
"YosoForSequenceClassification",
"YosoForTokenClassification",
"YosoLayer",
"YosoModel",
"YosoPreTrainedModel",
]
if TYPE_CHECKING:
from .configuration_yoso import YOSO_PRETRAINED_CONFIG_ARCHIVE_MAP, YosoConfig
try:
if not is_torch_available():
raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
pass
else:
from .modeling_yoso import (
YOSO_PRETRAINED_MODEL_ARCHIVE_LIST,
YosoForMaskedLM,
YosoForMultipleChoice,
YosoForQuestionAnswering,
YosoForSequenceClassification,
YosoForTokenClassification,
YosoLayer,
YosoModel,
YosoPreTrainedModel,
)
else:
import sys
sys.modules[__name__] = _LazyModule(__name__, globals()["__file__"], _import_structure)
|
Subsets and Splits
PyTorch Neural Network Imports
This query filters for code examples containing a specific PyTorch import pattern, which is useful for finding code snippets that use PyTorch's neural network module but doesn't provide deeper analytical insights about the dataset.
HTML Files in Train Set
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SQL Console for nick007x/github-code-2025
Retrieves 200 file paths that end with '.html' or '.htm', providing a basic overview of HTML files in the dataset.
Top HTML Files
The query retrieves a sample of HTML file paths, providing basic filtering but limited analytical value.
CSharp Repositories Excluding Unity
Retrieves all records for repositories that contain C# files but are not related to Unity, providing a basic filter of the dataset.
C# File Count per Repository
Counts the total number of C# files across distinct repositories, providing a basic measure of C# file presence.
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Lists unique repository IDs containing C# files, providing basic filtering to understand which repositories have C# code.
Select Groovy Files: Train Set
Retrieves the first 1000 entries from the 'train' dataset where the file path ends with '.groovy', providing a basic sample of Groovy files.
GitHub Repos with WiFiClientSecure
Finds specific file paths in repositories that contain particular code snippets related to WiFiClientSecure and ChatGPT, providing basic filtering of relevant files.