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HNET_8k_mlp_decoding_N2_2e18flops_clinvar_test

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train · 1.02k rows

ref_forward_sequence string	alt_forward_sequence string	label int64	chromosome string	position int64	seq string	ref string	alt string	start int64	stop int64	chrom string	loss_weights list	input_ids list	loss list	unreduced_loss list	logits list	bpred_output list	inference_params null	ar_loss list	ratio_loss null	total_flops list
ACTGGGGTAGTGATGTGTCCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCCTTAGACAAGACACAGTGTAGGGCCCGGCCCGTGTTGGCCCCAGGACTCCTTTGGAATATAGCTGTGGACAATGAATCCTGCGAGCGATGGGGGCACATCAGAGAGCATTTTTGACCTGGACTATGCATCCTGGGGGATCCGCTCCACGCTGATGGTCGCTGGCTTTGTCTTCTACTTGGGCGTCTTTGTGGTCTGCCACCAGCTGTCCTCTTCCCTGAATGCCACTTACCGTTCTTTGGTGGCCAGAGAGAAGGTCTTCTGGGACCTGGCGGCCACGCGTGCAGTCTTTGGTGTTCAGAGCACAGCCGCAGGCCTGTGGGCTCTGCTGGGGGACCCTGTGCTGCATGCCGACAAGGCGCGTGGCCAGCAGAACTGGTGCTGGTTTCACATCACGA	ACTGGGGTAGTGATGTGTCCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCCTTAGACAAGACACAGTGTAGGGCCCGGCCCGTGTTGGCCCCAGGACTCCTTTGGAATATAGCTGTGGACAATGAATCCTGCGAGCGATGGGGGCACATCAGAGAGCATTTTTGACCTGGACTATGCATCCTGGGGGATCGGCTCCACGCTGATGGTCGCTGGCTTTGTCTTCTACTTGGGCGTCTTTGTGGTCTGCCACCAGCTGTCCTCTTCCCTGAATGCCACTTACCGTTCTTTGGTGGCCAGAGAGAAGGTCTTCTGGGACCTGGCGGCCACGCGTGCAGTCTTTGGTGTTCAGAGCACAGCCGCAGGCCTGTGGGCTCTGCTGGGGGACCCTGTGCTGCATGCCGACAAGGCGCGTGGCCAGCAGAACTGGTGCTGGTTTCACATCACGA	1	8	1,771,124	ACTGGGGTAGTGATGTGTCCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCCTTAGACAAGACACAGTGTAGGGCCCGGCCCGTGTTGGCCCCAGGACTCCTTTGGAATATAGCTGTGGACAATGAATCCTGCGAGCGATGGGGGCACATCAGAGAGCATTTTTGACCTGGACTATGCATCCTGGGGGATCCGCTCCACGCTGATGGTCGCTGGCTTTGTCTTCTACTTGGGCGTCTTTGTGGTCTGCCACCAGCTGTCCTCTTCCCTGAATGCCACTTACCGTTCTTTGGTGGCCAGAGAGAAGGTCTTCTGGGACCTGGCGGCCACGCGTGCAGTCTTTGGTGTTCAGAGCACAGCCGCAGGCCTGTGGGCTCTGCTGGGGGACCCTGTGCTGCATGCCGACAAGGCGCGTGGCCAGCAGAACTGGTGCTGGTTTCACATCACGA	C	G	1,771,124	1,771,636	8	[ 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1...	[ [ 7, 8, 10, 9, 9, 9, 9, 10, 7, 9, 10, 9, 7, 10, 9, 10, 9, 10, 8, 8, 10, 10, 9, 10, 10, 10, 8, 10, 7, 10, 8, 9, 7, 9, 10, 8, 7, 7, 8, 7, 8, 7, 7,...	[ 1.339447021484375 ]	[ 0.002227783203125, 0.0029296875, 0.002227783203125, 0.002777099609375, 0.002593994140625, 0.0026702880859375, 0.0029754638671875, 0.002410888671875, 0.0023345947265625, 0.0020904541015625, 0.0023956298828125, 0.0020904541015625, 0.0026397705078125, 0.00238037109375, 0.00213623046875, 0...	[ [ [ -11.8125, -12.0625, -11.875, -11.6875, -11.6875, -11.8125, -11.5, 3.90625, 3.296875, 3.671875, 3.6875, -11.1875, -11.3125, -11.4375, -12, -11.75 ], [ -10.8125, -11.0625, -10.9375, ...	[ { "boundary_mask": [ true, false, false, true, false, false, true, false, false, true, false, true, false, true, true, false, false, false, true, false, false, false, false, ...	null	[ 1.339447021484375 ]	null	[ 16150023168 ]
"CCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCC(...TRUNCATED)	"CCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCC(...TRUNCATED)	1	8	1,771,142	"CCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCC(...TRUNCATED)	G	C	1,771,142	1,771,654	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[8,8,10,10,9,10,10,10,8,10,7,10,8,9,7,9,10,8,7,7,8,7,8,7,7,7,7,10,9,7,7,10,9,7,10,8,10,10,10,8,10,1(...TRUNCATED)	[ 1.3365859985351562 ]	[0.002685546875,0.0025787353515625,0.0025177001953125,0.0022430419921875,0.00250244140625,0.00234985(...TRUNCATED)	[[[-11.0,-11.25,-11.0625,-10.9375,-10.8125,-10.875,-10.9375,3.4375,3.125,1.546875,3.4375,-10.5625,-1(...TRUNCATED)	[{"boundary_mask":[true,true,false,false,true,false,false,false,true,true,true,false,true,false,fals(...TRUNCATED)	null	[ 1.3365859985351562 ]	null	[ 16386148352 ]
"TCTCCATGCAGGCGGGCTGGTCCGAGTCTCTGTTTTGGAAGCTCAACCAGTGGCTGATGATTCACATGTTTCACTGCCGCATGGTTCTAACCTACCACA(...TRUNCATED)	"TCTCCATGCAGGCGGGCTGGTCCGAGTCTCTGTTTTGGAAGCTCAACCAGTGGCTGATGATTCACATGTTTCACTGCCGCATGGTTCTAACCTACCACA(...TRUNCATED)	1	8	1,780,495	"TCTCCATGCAGGCGGGCTGGTCCGAGTCTCTGTTTTGGAAGCTCAACCAGTGGCTGATGATTCACATGTTTCACTGCCGCATGGTTCTAACCTACCACA(...TRUNCATED)	G	C	1,780,495	1,781,007	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[10,8,10,8,8,7,10,9,8,7,9,9,8,9,9,9,8,10,9,9,10,8,8,9,7,9,10,8,10,8,10,9,10,10,10,10,9,9,7,7,9,8,10(...TRUNCATED)	[ 1.2857742309570312 ]	[0.0023040771484375,0.002593994140625,0.0023651123046875,0.0025787353515625,0.0026092529296875,0.002(...TRUNCATED)	[[[-11.8125,-11.75,-11.75,-11.5,-11.5625,-11.75,-11.125,3.53125,3.5,3.6875,3.859375,-11.125,-11.4375(...TRUNCATED)	[{"boundary_mask":[true,true,false,true,true,true,true,false,true,false,true,true,true,false,true,tr(...TRUNCATED)	null	[ 1.2857742309570312 ]	null	[ 16055574528 ]
"GGGAACATGTTTCACCATGTCCAGGAAGGGCTGTATTTTTAAGGTCTGTTTTTTCCTTTTTTCCAACAAACAAAACCAAAACAAAACCTAGCCCAGAAC(...TRUNCATED)	"GGGAACATGTTTCACCATGTCCAGGAAGGGCTGTATTTTTAAGGTCTGTTTTTTCCTTTTTTCCAACAAACAAAACCAAAACAAAACCTAGCCCAGAAC(...TRUNCATED)	1	8	1,882,669	"GGGAACATGTTTCACCATGTCCAGGAAGGGCTGTATTTTTAAGGTCTGTTTTTTCCTTTTTTCCAACAAACAAAACCAAAACAAAACCTAGCCCAGAAC(...TRUNCATED)	C	T	1,882,669	1,883,181	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[9,9,9,7,7,8,7,10,9,10,10,10,8,7,8,8,7,10,9,10,8,8,7,9,9,7,7,9,9,9,8,10,9,10,7,10,10,10,10,10,7,7,9(...TRUNCATED)	[ 1.3111991882324219 ]	[0.002655029296875,0.002593994140625,0.0026397705078125,0.0020599365234375,0.001983642578125,0.00286(...TRUNCATED)	[[[-11.75,-11.8125,-12.0,-11.6875,-11.75,-11.75,-11.375,3.953125,3.546875,3.796875,3.734375,-11.0625(...TRUNCATED)	[{"boundary_mask":[true,false,true,false,false,true,false,false,true,false,false,false,true,true,tru(...TRUNCATED)	null	[ 1.3111991882324219 ]	null	[ 16197251072 ]
"TAACACTTCAGAGGGTTTTTAGAGGGAGTAGATGTGAACTTGTGTGTATGATTCACCGTTGTAACTGGAACAGATATGTTTTAAGCAGCGTTATGCATT(...TRUNCATED)	"TAACACTTCAGAGGGTTTTTAGAGGGAGTAGATGTGAACTTGTGTGTATGATTCACCGTTGTAACTGGAACAGATATGTTTTAAGCAGCGTTATGCATT(...TRUNCATED)	1	8	6,414,797	"TAACACTTCAGAGGGTTTTTAGAGGGAGTAGATGTGAACTTGTGTGTATGATTCACCGTTGTAACTGGAACAGATATGTTTTAAGCAGCGTTATGCATT(...TRUNCATED)	C	G	6,414,797	6,415,309	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[10,7,7,8,7,8,10,10,8,7,9,7,9,9,9,10,10,10,10,10,7,9,7,9,9,9,7,9,10,7,9,7,10,9,10,9,7,7,8,10,10,9,1(...TRUNCATED)	[ 1.2783737182617188 ]	[0.0023040771484375,0.002349853515625,0.0019073486328125,0.003082275390625,0.00238037109375,0.003204(...TRUNCATED)	[[[-11.8125,-11.75,-11.75,-11.5,-11.5625,-11.75,-11.125,3.53125,3.5,3.6875,3.859375,-11.125,-11.4375(...TRUNCATED)	[{"boundary_mask":[true,true,true,true,false,false,false,true,false,false,true,false,false,false,tru(...TRUNCATED)	null	[ 1.2783737182617188 ]	null	[ 17802870784 ]
"AACAGATATGTTTTAAGCAGCGTTATGCATTCCTTTGAGTGTTTCTCTGTCAGATGTTGAGAAACAGAATTGCTGGGGTAGAGGTTTTTTGATCAGTTG(...TRUNCATED)	"AACAGATATGTTTTAAGCAGCGTTATGCATTCCTTTGAGTGTTTCTCTGTCAGATGTTGAGAAACAGAATTGCTGGGGTAGAGGTTTTTTGATCAGTTG(...TRUNCATED)	1	8	6,414,865	"AACAGATATGTTTTAAGCAGCGTTATGCATTCCTTTGAGTGTTTCTCTGTCAGATGTTGAGAAACAGAATTGCTGGGGTAGAGGTTTTTTGATCAGTTG(...TRUNCATED)	C	T	6,414,865	6,415,377	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[7,7,8,7,9,7,10,7,10,9,10,10,10,10,7,7,9,8,7,9,8,9,10,10,7,10,9,8,7,10,10,8,8,10,10,10,9,7,9,10,9,1(...TRUNCATED)	[ 1.2709732055664062 ]	[0.002227783203125,0.00213623046875,0.0029296875,0.0023956298828125,0.0028228759765625,0.00194549560(...TRUNCATED)	[[[-11.8125,-12.0625,-11.875,-11.6875,-11.6875,-11.8125,-11.5,3.90625,3.296875,3.671875,3.6875,-11.1(...TRUNCATED)	[{"boundary_mask":[true,true,true,false,true,false,false,true,false,true,false,false,true,false,true(...TRUNCATED)	null	[ 1.2709732055664062 ]	null	[ 17330634752 ]
"CTGAGGAGACACAGTTGGCTTGCTGACAAGTCTAGCTCCATATCATATTCTCACTTAAAACTTAGTCTAAAAAAAGTGAAAAACACATTTACCTATATC(...TRUNCATED)	"CTGAGGAGACACAGTTGGCTTGCTGACAAGTCTAGCTCCATATCATATTCTCACTTAAAACTTAGTCTAAAAAAAGTGAAAAACACATTTACCTATATC(...TRUNCATED)	1	8	6,508,958	"CTGAGGAGACACAGTTGGCTTGCTGACAAGTCTAGCTCCATATCATATTCTCACTTAAAACTTAGTCTAAAAAAAGTGAAAAACACATTTACCTATATC(...TRUNCATED)	C	G	6,508,958	6,509,470	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[8,10,9,7,9,9,7,9,7,8,7,8,7,9,10,10,9,9,8,10,10,9,8,10,9,7,8,7,7,9,10,8,10,7,9,8,10,8,8,7,10,7,10,8(...TRUNCATED)	[ 1.2857894897460938 ]	[0.002685546875,0.0024261474609375,0.0025787353515625,0.0023345947265625,0.0026397705078125,0.002609(...TRUNCATED)	[[[-11.0,-11.25,-11.0625,-10.9375,-10.8125,-10.875,-10.9375,3.4375,3.125,1.546875,3.4375,-10.5625,-1(...TRUNCATED)	[{"boundary_mask":[true,false,true,false,true,false,false,true,false,true,true,true,true,true,false,(...TRUNCATED)	null	[ 1.2857894897460938 ]	null	[ 15961125888 ]
"TTTCTACATCATTCATATGCAGCTTTTGTATTTTCTGCACAGCAGCGGCACTTAGAGCCCTTGGCAAGCACTCTAGGCGAGGTAGCTGCCCAGTAACTA(...TRUNCATED)	"TTTCTACATCATTCATATGCAGCTTTTGTATTTTCTGCACAGCAGCGGCACTTAGAGCCCTTGGCAAGCACTCTAGGCGAGGTAGCTGCCCAGTAACTA(...TRUNCATED)	1	8	6,519,898	"TTTCTACATCATTCATATGCAGCTTTTGTATTTTCTGCACAGCAGCGGCACTTAGAGCCCTTGGCAAGCACTCTAGGCGAGGTAGCTGCCCAGTAACTA(...TRUNCATED)	G	A	6,519,898	6,520,410	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[10,10,10,8,10,7,8,7,10,8,7,10,10,8,7,10,7,10,9,8,7,9,8,10,10,10,10,9,10,7,10,10,10,10,8,10,9,8,7,8(...TRUNCATED)	[ 1.2861099243164062 ]	[0.0023040771484375,0.0021514892578125,0.0022735595703125,0.002471923828125,0.0024261474609375,0.002(...TRUNCATED)	[[[-11.8125,-11.75,-11.75,-11.5,-11.5625,-11.75,-11.125,3.53125,3.5,3.6875,3.859375,-11.125,-11.4375(...TRUNCATED)	[{"boundary_mask":[true,false,false,true,true,true,true,true,true,false,true,true,false,true,false,f(...TRUNCATED)	null	[ 1.2861099243164062 ]	null	[ 15866677248 ]
"GCAGAGGTAGCAGCCTCCATCTTCCAGCTGCTCCAGGGCGCTGAGGCTATGCAGGCCCCGGGGTGTGGTGACAGAGCGCACCCCAAAGGAGAGAGGCAC(...TRUNCATED)	"GCAGAGGTAGCAGCCTCCATCTTCCAGCTGCTCCAGGGCGCTGAGGCTATGCAGGCCCCGGGGTGTGGTGACAGAGCGCACCCCAAAGGAGAGAGGCAC(...TRUNCATED)	1	8	10,623,146	"GCAGAGGTAGCAGCCTCCATCTTCCAGCTGCTCCAGGGCGCTGAGGCTATGCAGGCCCCGGGGTGTGGTGACAGAGCGCACCCCAAAGGAGAGAGGCAC(...TRUNCATED)	G	T	10,623,146	10,623,658	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[9,8,7,9,7,9,9,10,7,9,8,7,9,8,8,10,8,8,7,10,8,10,10,8,8,7,9,8,10,9,8,10,8,8,7,9,9,9,8,9,8,10,9,7,9,(...TRUNCATED)	[ 1.3324813842773438 ]	[0.002655029296875,0.00262451171875,0.002685546875,0.0024566650390625,0.002227783203125,0.0025177001(...TRUNCATED)	[[[-11.75,-11.8125,-12.0,-11.6875,-11.75,-11.75,-11.375,3.953125,3.546875,3.796875,3.734375,-11.0625(...TRUNCATED)	[{"boundary_mask":[true,false,true,true,false,true,false,false,false,true,true,true,true,true,true,f(...TRUNCATED)	null	[ 1.3324813842773438 ]	null	[ 15205536768 ]
"GGCACCTGGAATGGGGTGGCACCTGGGCACTTACCCCGATTTTGGTTAAGGGATCACCTCCGAGCAAGCTCTCTGTCTTCTGATTGGCTTCTTCACTCC(...TRUNCATED)	"GGCACCTGGAATGGGGTGGCACCTGGGCACTTACCCCGATTTTGGTTAAGGGATCACCTCCGAGCAAGCTCTCTGTCTTCTGATTGGCTTCTTCACTCC(...TRUNCATED)	1	8	11,556,804	"GGCACCTGGAATGGGGTGGCACCTGGGCACTTACCCCGATTTTGGTTAAGGGATCACCTCCGAGCAAGCTCTCTGTCTTCTGATTGGCTTCTTCACTCC(...TRUNCATED)	C	G	11,556,804	11,557,316	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[9,9,8,7,8,8,10,9,9,7,7,10,9,9,9,9,10,9,9,8,7,8,8,10,9,9,9,8,7,8,10,10,7,8,8,8,8,9,7,10,10,10,10,9,(...TRUNCATED)	[ 1.3008136749267578 ]	[0.002655029296875,0.002593994140625,0.0024261474609375,0.0026702880859375,0.0025787353515625,0.0025(...TRUNCATED)	[[[-11.75,-11.8125,-12.0,-11.6875,-11.75,-11.75,-11.375,3.953125,3.546875,3.796875,3.734375,-11.0625(...TRUNCATED)	[{"boundary_mask":[true,false,true,true,true,true,true,true,true,false,true,false,true,true,true,fal(...TRUNCATED)	null	[ 1.3008136749267578 ]	null	[ 16386148352 ]

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